HEADER SIGNALING PROTEIN 30-SEP-19 6UIB TITLE CRYSTAL STRUCTURE OF IL23 BOUND TO PEPTIDE 23-652 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-23 SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IL-23-A,INTERLEUKIN-23 SUBUNIT P19,IL-23P19; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: INTERLEUKIN-12 SUBUNIT BETA; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: IL-12B,CYTOTOXIC LYMPHOCYTE MATURATION FACTOR 40 KDA COMPND 10 SUBUNIT,CLMF P40,IL-12 SUBUNIT P40,NK CELL STIMULATORY FACTOR CHAIN COMPND 11 2,NKSF2; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: PEPTIDE 23-652; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IL23A, SGRF, UNQ2498/PRO5798; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: IL12B, NKSF2; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS COMPLEX, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.D.DURBIN,J.WANG,S.AFSHAR REVDAT 3 11-OCT-23 6UIB 1 HETSYN REVDAT 2 29-JUL-20 6UIB 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 15-JUL-20 6UIB 0 JRNL AUTH P.PANDYA,R.O.SAYERS,J.P.TING,S.MORSHEDIAN,C.TORRES, JRNL AUTH 2 J.S.CUDAL,K.ZHANG,J.R.FITCHETT,Q.ZHANG,F.F.ZHANG,J.WANG, JRNL AUTH 3 J.D.DURBIN,J.J.CARRILLO,A.ESPADA,H.BROUGHTON,Y.QIAN,S.AFSHAR JRNL TITL INTEGRATION OF PHAGE AND YEAST DISPLAY PLATFORMS: A RELIABLE JRNL TITL 2 AND COST EFFECTIVE APPROACH FOR BINNING OF PEPTIDES AS JRNL TITL 3 DISPLAYED ON-PHAGE. JRNL REF PLOS ONE V. 15 33961 2020 JRNL REFN ESSN 1932-6203 JRNL PMID 32479512 JRNL DOI 10.1371/JOURNAL.PONE.0233961 REMARK 2 REMARK 2 RESOLUTION. 2.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 18625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.390 REMARK 3 FREE R VALUE TEST SET COUNT : 1003 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.74 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3053 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2230 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2882 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 171 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3180 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 89.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.21780 REMARK 3 B22 (A**2) : 16.03970 REMARK 3 B33 (A**2) : -24.25760 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.360 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.424 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.273 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.428 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.277 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.887 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3287 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4485 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1048 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 66 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 477 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3287 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 450 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3585 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.15 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.97 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.01 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -33.7492 4.0151 -40.0396 REMARK 3 T TENSOR REMARK 3 T11: -0.1349 T22: -0.1691 REMARK 3 T33: -0.2412 T12: 0.0462 REMARK 3 T13: -0.1070 T23: -0.1316 REMARK 3 L TENSOR REMARK 3 L11: 2.5517 L22: 5.4442 REMARK 3 L33: 5.5175 L12: 0.8035 REMARK 3 L13: -1.3105 L23: -1.2744 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: 0.5592 S13: 0.1522 REMARK 3 S21: -0.8403 S22: 0.0068 S23: 0.4988 REMARK 3 S31: 0.2430 S32: -0.1685 S33: 0.0252 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|0 - 86} REMARK 3 ORIGIN FOR THE GROUP (A): 4.2036 37.0264 -17.5642 REMARK 3 T TENSOR REMARK 3 T11: -0.2157 T22: -0.2600 REMARK 3 T33: 0.2332 T12: -0.1847 REMARK 3 T13: -0.0324 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 7.8965 L22: 2.7453 REMARK 3 L33: 2.5655 L12: 5.4110 REMARK 3 L13: 0.1580 L23: -1.1811 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: 0.1118 S13: 0.7657 REMARK 3 S21: 0.2792 S22: 0.0855 S23: -0.0303 REMARK 3 S31: -0.4085 S32: -0.1938 S33: -0.1158 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { B|87 - 91} REMARK 3 ORIGIN FOR THE GROUP (A): 2.5250 20.7323 -27.6589 REMARK 3 T TENSOR REMARK 3 T11: -0.0572 T22: 0.2485 REMARK 3 T33: 0.2038 T12: -0.2528 REMARK 3 T13: 0.0328 T23: -0.0865 REMARK 3 L TENSOR REMARK 3 L11: 1.0238 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.8962 REMARK 3 L13: 1.1722 L23: 0.5435 REMARK 3 S TENSOR REMARK 3 S11: 0.0213 S12: 0.0060 S13: -0.0524 REMARK 3 S21: -0.0577 S22: -0.0090 S23: -0.0176 REMARK 3 S31: 0.0978 S32: 0.0423 S33: -0.0124 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { B|92 - 211} REMARK 3 ORIGIN FOR THE GROUP (A): -15.7889 16.3453 -18.4332 REMARK 3 T TENSOR REMARK 3 T11: 0.0667 T22: -0.1463 REMARK 3 T33: -0.1577 T12: -0.1866 REMARK 3 T13: -0.0577 T23: 0.0416 REMARK 3 L TENSOR REMARK 3 L11: 5.3040 L22: 4.6049 REMARK 3 L33: 2.5976 L12: 3.9417 REMARK 3 L13: 1.7385 L23: 1.9692 REMARK 3 S TENSOR REMARK 3 S11: 0.5357 S12: -0.0890 S13: -0.1527 REMARK 3 S21: 0.8507 S22: -0.5528 S23: -0.5453 REMARK 3 S31: -0.1705 S32: 0.2502 S33: 0.0172 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { B|212 - 312} REMARK 3 ORIGIN FOR THE GROUP (A): -32.1591 -8.6429 -15.6259 REMARK 3 T TENSOR REMARK 3 T11: -0.0345 T22: -0.0734 REMARK 3 T33: -0.1396 T12: -0.1323 REMARK 3 T13: -0.0237 T23: -0.0727 REMARK 3 L TENSOR REMARK 3 L11: 1.1001 L22: 5.6900 REMARK 3 L33: 2.4020 L12: 1.5285 REMARK 3 L13: -0.7810 L23: -1.6639 REMARK 3 S TENSOR REMARK 3 S11: 0.5656 S12: -0.3609 S13: -0.2372 REMARK 3 S21: 0.8824 S22: -0.4819 S23: 0.1617 REMARK 3 S31: -0.0476 S32: 0.1797 S33: -0.0837 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { B|313 - 314} REMARK 3 ORIGIN FOR THE GROUP (A): -6.9298 29.3331 -27.2245 REMARK 3 T TENSOR REMARK 3 T11: -0.0545 T22: 0.1452 REMARK 3 T33: 0.1224 T12: -0.3040 REMARK 3 T13: -0.0055 T23: 0.1381 REMARK 3 L TENSOR REMARK 3 L11: 0.7288 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.4683 REMARK 3 L13: -0.0251 L23: -0.4448 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: 0.0433 S13: -0.0010 REMARK 3 S21: -0.0154 S22: 0.0082 S23: -0.0244 REMARK 3 S31: -0.0191 S32: 0.0114 S33: -0.0196 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -27.1873 -8.9554 -30.6282 REMARK 3 T TENSOR REMARK 3 T11: 0.0549 T22: -0.0469 REMARK 3 T33: -0.0336 T12: 0.0638 REMARK 3 T13: -0.0312 T23: -0.1046 REMARK 3 L TENSOR REMARK 3 L11: 1.0284 L22: 2.3882 REMARK 3 L33: 4.3732 L12: -1.5287 REMARK 3 L13: -4.6883 L23: -1.8420 REMARK 3 S TENSOR REMARK 3 S11: 0.0383 S12: 0.2231 S13: -0.0922 REMARK 3 S21: -0.4362 S22: -0.2660 S23: -0.3914 REMARK 3 S31: 0.5757 S32: 0.2162 S33: 0.2277 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UIB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18723 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.740 REMARK 200 RESOLUTION RANGE LOW (A) : 101.133 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.42800 REMARK 200 R SYM FOR SHELL (I) : 0.42800 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 3DUH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7, 17% W/V PEG 3350 REMARK 280 AND 150 MM POTASSIUM NITRATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.79700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.56650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.33250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.56650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.79700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.33250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A -3 REMARK 465 ARG A -2 REMARK 465 SER A -1 REMARK 465 LEU A 0 REMARK 465 ARG A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 GLY A 6 REMARK 465 SER A 7 REMARK 465 MET A 35 REMARK 465 ASP A 36 REMARK 465 LEU A 37 REMARK 465 ARG A 38 REMARK 465 GLU A 39 REMARK 465 GLU A 40 REMARK 465 GLY A 41 REMARK 465 ASP A 42 REMARK 465 GLU A 43 REMARK 465 GLU A 44 REMARK 465 THR A 45 REMARK 465 PRO A 118 REMARK 465 GLU A 119 REMARK 465 GLY A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 TRP A 123 REMARK 465 GLU A 124 REMARK 465 THR A 125 REMARK 465 GLN A 126 REMARK 465 GLN A 127 REMARK 465 ILE A 128 REMARK 465 PRO A 129 REMARK 465 SER A 130 REMARK 465 LEU A 131 REMARK 465 SER A 132 REMARK 465 PRO A 133 REMARK 465 SER A 134 REMARK 465 GLN A 135 REMARK 465 SER A 169 REMARK 465 PRO A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 HIS A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 ASP B -3 REMARK 465 ARG B -2 REMARK 465 SER B -1 REMARK 465 TRP B 15 REMARK 465 TYR B 16 REMARK 465 PRO B 17 REMARK 465 ASP B 18 REMARK 465 THR B 30 REMARK 465 PRO B 31 REMARK 465 GLU B 32 REMARK 465 GLU B 33 REMARK 465 ASP B 34 REMARK 465 GLY B 35 REMARK 465 ILE B 36 REMARK 465 THR B 37 REMARK 465 LYS B 70 REMARK 465 GLY B 71 REMARK 465 GLY B 72 REMARK 465 GLU B 73 REMARK 465 VAL B 74 REMARK 465 LEU B 75 REMARK 465 SER B 76 REMARK 465 LYS B 99 REMARK 465 GLU B 100 REMARK 465 PRO B 101 REMARK 465 LYS B 102 REMARK 465 ARG B 159 REMARK 465 GLY B 160 REMARK 465 ASP B 161 REMARK 465 ASN B 162 REMARK 465 LYS B 163 REMARK 465 ARG B 261 REMARK 465 GLU B 262 REMARK 465 ASN B 281 REMARK 465 ALA B 282 REMARK 465 SER B 306 REMARK 465 HIS B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 465 HIS B 311 REMARK 465 HIS B 312 REMARK 465 ASP C 1 REMARK 465 THR C 2 REMARK 465 LEU C 3 REMARK 465 SER C 19 REMARK 465 THR C 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 34 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 ARG A 64 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 65 CG OD1 OD2 REMARK 470 GLN A 68 CG CD OE1 NE2 REMARK 470 GLN A 72 CG CD OE1 NE2 REMARK 470 GLU A 82 CD OE1 OE2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 SER A 95 OG REMARK 470 LEU A 97 CG CD1 CD2 REMARK 470 GLN A 117 CG CD OE1 NE2 REMARK 470 TRP A 137 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 137 CZ3 CH2 REMARK 470 ARG A 139 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 LYS B 5 CG CD CE NZ REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 MET B 23 CG SD CE REMARK 470 GLN B 42 CB CG CD OE1 NE2 REMARK 470 GLU B 45 CG CD OE1 OE2 REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 HIS B 69 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 77 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 78 OG REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 ILE B 89 CG1 CG2 CD1 REMARK 470 LYS B 104 CD CE NZ REMARK 470 SER B 127 OG REMARK 470 LYS B 135 CG CD CE NZ REMARK 470 SER B 175 OG REMARK 470 LYS B 222 CG CD CE NZ REMARK 470 GLU B 231 CG CD OE1 OE2 REMARK 470 LYS B 258 CG CD CE NZ REMARK 470 LYS B 260 CG CD CE NZ REMARK 470 LYS B 263 CG CD CE NZ REMARK 470 LYS B 264 CG CD CE NZ REMARK 470 ARG B 279 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 280 CG CD CE NZ REMARK 470 LYS C 5 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 66 93.20 -166.78 REMARK 500 THR A 91 30.81 -93.52 REMARK 500 ASP A 99 31.13 -79.53 REMARK 500 ASP B 41 -124.28 56.49 REMARK 500 ILE B 89 117.24 -162.55 REMARK 500 THR B 92 55.97 -140.59 REMARK 500 ASN B 113 -166.81 -161.83 REMARK 500 LYS B 195 -99.85 62.69 REMARK 500 ARG B 279 -152.28 -111.22 REMARK 500 SER B 295 -159.59 -91.05 REMARK 500 REMARK 500 REMARK: NULL DBREF 6UIB A 1 170 UNP Q9NPF7 IL23A_HUMAN 20 189 DBREF 6UIB B 1 306 UNP P29460 IL12B_HUMAN 23 328 DBREF 6UIB C 1 20 PDB 6UIB 6UIB 1 20 SEQADV 6UIB ASP A -3 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB ARG A -2 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB SER A -1 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB LEU A 0 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB HIS A 171 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB HIS A 172 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB HIS A 173 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB HIS A 174 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB HIS A 175 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB HIS A 176 UNP Q9NPF7 EXPRESSION TAG SEQADV 6UIB ASP B -3 UNP P29460 EXPRESSION TAG SEQADV 6UIB ARG B -2 UNP P29460 EXPRESSION TAG SEQADV 6UIB SER B -1 UNP P29460 EXPRESSION TAG SEQADV 6UIB LEU B 0 UNP P29460 EXPRESSION TAG SEQADV 6UIB HIS B 307 UNP P29460 EXPRESSION TAG SEQADV 6UIB HIS B 308 UNP P29460 EXPRESSION TAG SEQADV 6UIB HIS B 309 UNP P29460 EXPRESSION TAG SEQADV 6UIB HIS B 310 UNP P29460 EXPRESSION TAG SEQADV 6UIB HIS B 311 UNP P29460 EXPRESSION TAG SEQADV 6UIB HIS B 312 UNP P29460 EXPRESSION TAG SEQRES 1 A 180 ASP ARG SER LEU ARG ALA VAL PRO GLY GLY SER SER PRO SEQRES 2 A 180 ALA TRP THR GLN CYS GLN GLN LEU SER GLN LYS LEU CYS SEQRES 3 A 180 THR LEU ALA TRP SER ALA HIS PRO LEU VAL GLY HIS MET SEQRES 4 A 180 ASP LEU ARG GLU GLU GLY ASP GLU GLU THR THR ASN ASP SEQRES 5 A 180 VAL PRO HIS ILE GLN CYS GLY ASP GLY CYS ASP PRO GLN SEQRES 6 A 180 GLY LEU ARG ASP ASN SER GLN PHE CYS LEU GLN ARG ILE SEQRES 7 A 180 HIS GLN GLY LEU ILE PHE TYR GLU LYS LEU LEU GLY SER SEQRES 8 A 180 ASP ILE PHE THR GLY GLU PRO SER LEU LEU PRO ASP SER SEQRES 9 A 180 PRO VAL GLY GLN LEU HIS ALA SER LEU LEU GLY LEU SER SEQRES 10 A 180 GLN LEU LEU GLN PRO GLU GLY HIS HIS TRP GLU THR GLN SEQRES 11 A 180 GLN ILE PRO SER LEU SER PRO SER GLN PRO TRP GLN ARG SEQRES 12 A 180 LEU LEU LEU ARG PHE LYS ILE LEU ARG SER LEU GLN ALA SEQRES 13 A 180 PHE VAL ALA VAL ALA ALA ARG VAL PHE ALA HIS GLY ALA SEQRES 14 A 180 ALA THR LEU SER PRO HIS HIS HIS HIS HIS HIS SEQRES 1 B 316 ASP ARG SER LEU ILE TRP GLU LEU LYS LYS ASP VAL TYR SEQRES 2 B 316 VAL VAL GLU LEU ASP TRP TYR PRO ASP ALA PRO GLY GLU SEQRES 3 B 316 MET VAL VAL LEU THR CYS ASP THR PRO GLU GLU ASP GLY SEQRES 4 B 316 ILE THR TRP THR LEU ASP GLN SER SER GLU VAL LEU GLY SEQRES 5 B 316 SER GLY LYS THR LEU THR ILE GLN VAL LYS GLU PHE GLY SEQRES 6 B 316 ASP ALA GLY GLN TYR THR CYS HIS LYS GLY GLY GLU VAL SEQRES 7 B 316 LEU SER HIS SER LEU LEU LEU LEU HIS LYS LYS GLU ASP SEQRES 8 B 316 GLY ILE TRP SER THR ASP ILE LEU LYS ASP GLN LYS GLU SEQRES 9 B 316 PRO LYS ASN LYS THR PHE LEU ARG CYS GLU ALA LYS ASN SEQRES 10 B 316 TYR SER GLY ARG PHE THR CYS TRP TRP LEU THR THR ILE SEQRES 11 B 316 SER THR ASP LEU THR PHE SER VAL LYS SER SER ARG GLY SEQRES 12 B 316 SER SER ASP PRO GLN GLY VAL THR CYS GLY ALA ALA THR SEQRES 13 B 316 LEU SER ALA GLU ARG VAL ARG GLY ASP ASN LYS GLU TYR SEQRES 14 B 316 GLU TYR SER VAL GLU CYS GLN GLU ASP SER ALA CYS PRO SEQRES 15 B 316 ALA ALA GLU GLU SER LEU PRO ILE GLU VAL MET VAL ASP SEQRES 16 B 316 ALA VAL HIS LYS LEU LYS TYR GLU ASN TYR THR SER SER SEQRES 17 B 316 PHE PHE ILE ARG ASP ILE ILE LYS PRO ASP PRO PRO LYS SEQRES 18 B 316 ASN LEU GLN LEU LYS PRO LEU LYS ASN SER ARG GLN VAL SEQRES 19 B 316 GLU VAL SER TRP GLU TYR PRO ASP THR TRP SER THR PRO SEQRES 20 B 316 HIS SER TYR PHE SER LEU THR PHE CYS VAL GLN VAL GLN SEQRES 21 B 316 GLY LYS SER LYS ARG GLU LYS LYS ASP ARG VAL PHE THR SEQRES 22 B 316 ASP LYS THR SER ALA THR VAL ILE CYS ARG LYS ASN ALA SEQRES 23 B 316 SER ILE SER VAL ARG ALA GLN ASP ARG TYR TYR SER SER SEQRES 24 B 316 SER TRP SER GLU TRP ALA SER VAL PRO CYS SER HIS HIS SEQRES 25 B 316 HIS HIS HIS HIS SEQRES 1 C 20 ASP THR LEU THR LYS SER PHE CYS TYR PHE GLY THR TRP SEQRES 2 C 20 CYS GLN MET TYR GLY SER THR HET NAG D 1 14 HET NAG D 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 5 HOH *26(H2 O) HELIX 1 AA1 ALA A 10 HIS A 29 1 20 HELIX 2 AA2 GLN A 53 GLY A 57 5 5 HELIX 3 AA3 ASP A 59 GLY A 86 1 28 HELIX 4 AA4 SER A 100 GLN A 117 1 18 HELIX 5 AA5 TRP A 137 LEU A 168 1 32 HELIX 6 AA6 GLU B 59 ALA B 63 5 5 HELIX 7 AA7 PHE B 206 ILE B 211 5 6 HELIX 8 AA8 SER C 6 TYR C 9 5 4 HELIX 9 AA9 PHE C 10 GLY C 18 1 9 SHEET 1 AA1 5 ILE B 1 LYS B 5 0 SHEET 2 AA1 5 VAL B 8 LEU B 13 -1 O VAL B 8 N LEU B 4 SHEET 3 AA1 5 SER B 78 LYS B 84 1 O LEU B 81 N TYR B 9 SHEET 4 AA1 5 GLY B 64 THR B 67 -1 N TYR B 66 O SER B 78 SHEET 5 AA1 5 THR B 39 LEU B 40 -1 N THR B 39 O THR B 67 SHEET 1 AA2 2 GLU B 22 THR B 27 0 SHEET 2 AA2 2 THR B 52 VAL B 57 -1 O ILE B 55 N VAL B 24 SHEET 1 AA3 4 ARG B 108 GLU B 110 0 SHEET 2 AA3 4 ARG B 117 THR B 124 -1 O TRP B 121 N ARG B 108 SHEET 3 AA3 4 TYR B 165 GLU B 173 -1 O TYR B 165 N THR B 124 SHEET 4 AA3 4 THR B 152 GLU B 156 -1 N ALA B 155 O GLU B 166 SHEET 1 AA4 7 ARG B 108 GLU B 110 0 SHEET 2 AA4 7 ARG B 117 THR B 124 -1 O TRP B 121 N ARG B 108 SHEET 3 AA4 7 TYR B 165 GLU B 173 -1 O TYR B 165 N THR B 124 SHEET 4 AA4 7 GLN B 144 CYS B 148 -1 N THR B 147 O GLN B 172 SHEET 5 AA4 7 LEU B 130 ARG B 138 -1 N ARG B 138 O GLN B 144 SHEET 6 AA4 7 ILE B 186 HIS B 194 -1 O GLU B 187 N SER B 137 SHEET 7 AA4 7 LYS B 197 PHE B 205 -1 O GLU B 199 N ALA B 192 SHEET 1 AA5 3 LYS B 217 PRO B 223 0 SHEET 2 AA5 3 GLN B 229 GLU B 235 -1 O SER B 233 N GLN B 220 SHEET 3 AA5 3 SER B 273 ILE B 277 -1 O ALA B 274 N VAL B 232 SHEET 1 AA6 4 ASP B 265 THR B 269 0 SHEET 2 AA6 4 LEU B 249 VAL B 255 -1 N VAL B 253 O VAL B 267 SHEET 3 AA6 4 ILE B 284 ASP B 290 -1 O SER B 285 N GLN B 254 SHEET 4 AA6 4 ALA B 301 VAL B 303 -1 O VAL B 303 N ILE B 284 SSBOND 1 CYS A 54 CYS B 177 1555 1555 2.04 SSBOND 2 CYS A 58 CYS A 70 1555 1555 2.04 SSBOND 3 CYS B 28 CYS B 68 1555 1555 2.04 SSBOND 4 CYS B 109 CYS B 120 1555 1555 2.04 SSBOND 5 CYS B 148 CYS B 171 1555 1555 2.04 SSBOND 6 CYS B 278 CYS B 305 1555 1555 2.04 SSBOND 7 CYS C 8 CYS C 14 1555 1555 2.04 LINK ND2 ASN B 200 C1 NAG D 1 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 CISPEP 1 GLU A 93 PRO A 94 0 3.83 CISPEP 2 THR B 242 PRO B 243 0 1.51 CRYST1 73.594 94.665 101.133 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013588 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009888 0.00000