HEADER SIGNALING PROTEIN 30-SEP-19 6UIH TITLE CRYSTAL STRUCTURE OF THE CORE DOMAIN FROM THE GST-LIKE PROTEIN GDAP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GANGLIOSIDE-INDUCED DIFFERENTIATION-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GST-LIKE CORE DOMAIN; COMPND 5 SYNONYM: GDAP1,GDAP1; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: AMINO ACIDS 145-199 REPLACED WITH GTG-LINKER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: GDAP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PKF3 KEYWDS THIOREDOXIN, GST-LIKE, GDAP1, MITOCHONDRIAL MORPHOLOGY, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.R.GOOGINS,A.P.VANDEMARK REVDAT 2 13-MAY-20 6UIH 1 JRNL REVDAT 1 29-APR-20 6UIH 0 JRNL AUTH M.R.GOOGINS,A.O.WOGHIREN-AFEGBUA,M.CALDERON,C.M.ST CROIX, JRNL AUTH 2 K.I.KISELYOV,A.P.VANDEMARK JRNL TITL STRUCTURAL AND FUNCTIONAL DIVERGENCE OF GDAP1 FROM THE JRNL TITL 2 GLUTATHIONE S-TRANSFERASE SUPERFAMILY. JRNL REF FASEB J. V. 34 7192 2020 JRNL REFN ESSN 1530-6860 JRNL PMID 32274853 JRNL DOI 10.1096/FJ.202000110R REMARK 2 REMARK 2 RESOLUTION. 2.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 15869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.560 REMARK 3 FREE R VALUE TEST SET COUNT : 1200 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1490 - 5.8751 1.00 1785 120 0.2110 0.1798 REMARK 3 2 5.8751 - 4.6644 1.00 1611 180 0.1890 0.2188 REMARK 3 3 4.6644 - 4.0751 1.00 1644 120 0.1702 0.2017 REMARK 3 4 4.0751 - 3.7027 1.00 1621 120 0.2060 0.2177 REMARK 3 5 3.7027 - 3.4374 1.00 1634 120 0.2237 0.2758 REMARK 3 6 3.4374 - 3.2347 1.00 1603 128 0.2447 0.2902 REMARK 3 7 3.2347 - 3.0728 1.00 1548 172 0.2689 0.3027 REMARK 3 8 3.0728 - 2.9390 1.00 1614 120 0.2989 0.3195 REMARK 3 9 2.9390 - 2.8260 1.00 1609 120 0.3586 0.3941 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15877 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.826 REMARK 200 RESOLUTION RANGE LOW (A) : 98.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 70.10 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 37.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 76.00 REMARK 200 R MERGE FOR SHELL (I) : 1.98600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 79.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M CITRATE, 200MM NACL, 10MM TCEP, REMARK 280 PH 7.0, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 27555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 28555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 31555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 32555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 35555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 36555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 37555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 38555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 39555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 40555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 41555 X+1/2,Z+1/2,-Y+1/2 REMARK 290 42555 -X+1/2,Z+1/2,Y+1/2 REMARK 290 43555 -X+1/2,-Z+1/2,-Y+1/2 REMARK 290 44555 X+1/2,-Z+1/2,Y+1/2 REMARK 290 45555 Z+1/2,Y+1/2,-X+1/2 REMARK 290 46555 Z+1/2,-Y+1/2,X+1/2 REMARK 290 47555 -Z+1/2,Y+1/2,X+1/2 REMARK 290 48555 -Z+1/2,-Y+1/2,-X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 98.29900 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 98.29900 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 98.29900 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 98.29900 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 98.29900 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 98.29900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 PRO A 20 REMARK 465 ASP A 21 REMARK 465 LYS A 22 REMARK 465 PRO A 59 REMARK 465 LEU A 60 REMARK 465 SER A 61 REMARK 465 GLU A 62 REMARK 465 HIS A 63 REMARK 465 ASN A 64 REMARK 465 GLU A 65 REMARK 465 PRO A 66 REMARK 465 TRP A 67 REMARK 465 PHE A 68 REMARK 465 MSE A 69 REMARK 465 ARG A 70 REMARK 465 LEU A 71 REMARK 465 ASN A 72 REMARK 465 SER A 73 REMARK 465 ALA A 74 REMARK 465 GLY A 75 REMARK 465 GLU A 232 REMARK 465 GLU A 233 REMARK 465 GLY A 234 REMARK 465 ASN A 235 REMARK 465 GLU A 293 REMARK 465 PHE A 294 REMARK 465 GLY A 295 REMARK 465 SER A 296 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 291 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 89 136.40 82.25 REMARK 500 GLU A 228 0.19 -61.74 REMARK 500 ARG A 273 69.24 39.99 REMARK 500 REMARK 500 REMARK: NULL DBREF 6UIH A 20 145 UNP O88741 GDAP1_MOUSE 20 145 DBREF 6UIH A 200 292 UNP O88741 GDAP1_MOUSE 200 292 SEQADV 6UIH GLY A 17 UNP O88741 EXPRESSION TAG SEQADV 6UIH GLY A 18 UNP O88741 EXPRESSION TAG SEQADV 6UIH SER A 19 UNP O88741 EXPRESSION TAG SEQADV 6UIH GLY A 146 UNP O88741 LINKER SEQADV 6UIH THR A 147 UNP O88741 LINKER SEQADV 6UIH GLY A 148 UNP O88741 LINKER SEQADV 6UIH GLU A 293 UNP O88741 EXPRESSION TAG SEQADV 6UIH PHE A 294 UNP O88741 EXPRESSION TAG SEQADV 6UIH GLY A 295 UNP O88741 EXPRESSION TAG SEQADV 6UIH SER A 296 UNP O88741 EXPRESSION TAG SEQRES 1 A 229 GLY GLY SER PRO ASP LYS GLU VAL HIS LEU ILE LEU TYR SEQRES 2 A 229 HIS TRP THR HIS SER PHE SER SER GLN LYS VAL ARG LEU SEQRES 3 A 229 VAL ILE ALA GLU LYS ALA LEU LYS CYS GLU GLU HIS ASP SEQRES 4 A 229 VAL SER LEU PRO LEU SER GLU HIS ASN GLU PRO TRP PHE SEQRES 5 A 229 MSE ARG LEU ASN SER ALA GLY GLU VAL PRO VAL LEU VAL SEQRES 6 A 229 HIS GLY GLU ASN ILE ILE CYS GLU ALA THR GLN ILE ILE SEQRES 7 A 229 ASP TYR LEU GLU GLN THR PHE LEU ASP GLU ARG THR PRO SEQRES 8 A 229 ARG LEU MSE PRO ASP GLU GLY SER MSE TYR TYR PRO ARG SEQRES 9 A 229 VAL GLN HIS TYR ARG GLU LEU LEU ASP SER LEU PRO MSE SEQRES 10 A 229 ASP ALA TYR THR HIS GLY CYS ILE LEU HIS PRO GLU GLY SEQRES 11 A 229 THR GLY ASP ASN VAL LYS TYR LEU LYS LYS ILE LEU ASP SEQRES 12 A 229 GLU LEU GLU LYS VAL LEU ASP GLN VAL GLU THR GLU LEU SEQRES 13 A 229 GLN ARG ARG ASN GLU GLU THR PRO GLU GLU GLY ASN GLN SEQRES 14 A 229 PRO TRP LEU CYS GLY GLU SER PHE THR LEU ALA ASP VAL SEQRES 15 A 229 SER LEU ALA VAL THR LEU HIS ARG LEU LYS PHE LEU GLY SEQRES 16 A 229 PHE ALA ARG ARG ASN TRP GLY HIS GLY LYS ARG PRO ASN SEQRES 17 A 229 LEU GLU THR TYR TYR GLU ARG VAL LEU LYS ARG LYS THR SEQRES 18 A 229 PHE ASN LYS VAL GLU PHE GLY SER MODRES 6UIH MSE A 110 MET MODIFIED RESIDUE MODRES 6UIH MSE A 116 MET MODIFIED RESIDUE MODRES 6UIH MSE A 133 MET MODIFIED RESIDUE HET MSE A 110 17 HET MSE A 116 17 HET MSE A 133 17 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 3(C5 H11 N O2 SE) HELIX 1 AA1 SER A 34 LYS A 47 1 14 HELIX 2 AA2 GLU A 89 PHE A 101 1 13 HELIX 3 AA3 TYR A 117 SER A 130 1 14 HELIX 4 AA4 HIS A 143 GLU A 145 5 3 HELIX 5 AA5 GLY A 146 GLU A 228 1 32 HELIX 6 AA6 THR A 245 LEU A 261 1 17 HELIX 7 AA7 ARG A 273 ARG A 286 1 14 HELIX 8 AA8 ARG A 286 VAL A 292 1 7 SHEET 1 AA1 4 CYS A 51 ASP A 55 0 SHEET 2 AA1 4 LEU A 26 HIS A 30 1 N LEU A 26 O GLU A 52 SHEET 3 AA1 4 VAL A 79 HIS A 82 -1 O VAL A 79 N TYR A 29 SHEET 4 AA1 4 ASN A 85 CYS A 88 -1 O ILE A 87 N LEU A 80 LINK C LEU A 109 N MSE A 110 1555 1555 1.31 LINK C MSE A 110 N PRO A 111 1555 1555 1.33 LINK C SER A 115 N MSE A 116 1555 1555 1.32 LINK C MSE A 116 N TYR A 117 1555 1555 1.33 LINK C PRO A 132 N MSE A 133 1555 1555 1.34 LINK C MSE A 133 N ASP A 134 1555 1555 1.31 CRYST1 196.598 196.598 196.598 90.00 90.00 90.00 I 4 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005087 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005087 0.00000