HEADER HYDROLASE/DNA 04-OCT-19 6UKH TITLE HHAI ENDONUCLEASE IN COMPLEX WITH DNA IN SPACE GROUP P41212 (PH 6.0) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HHAI RESTRICTION ENDONUCLEASE; COMPND 3 CHAIN: X; COMPND 4 EC: 3.-.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*CP*TP*GP*TP*TP*GP*CP*GP*CP*TP*TP*GP*G)-3'); COMPND 8 CHAIN: A; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(*CP*CP*AP*AP*GP*CP*GP*CP*AP*AP*CP*AP*G)-3'); COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS PARAHAEMOLYTICUS; SOURCE 3 ORGANISM_TAXID: 735; SOURCE 4 GENE: HMPREF1050_0931; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: HAEMOPHILUS PARAHAEMOLYTICUS; SOURCE 10 ORGANISM_TAXID: 735; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HAEMOPHILUS PARAHAEMOLYTICUS; SOURCE 14 ORGANISM_TAXID: 735 KEYWDS RESTRICTION, MODIFICATION, PROTEIN-DNA COMPLEX, IODINE PHASING, KEYWDS 2 HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,X.CHENG REVDAT 4 11-OCT-23 6UKH 1 LINK REVDAT 3 04-MAR-20 6UKH 1 JRNL REVDAT 2 08-JAN-20 6UKH 1 JRNL REVDAT 1 18-DEC-19 6UKH 0 JRNL AUTH J.R.HORTON,J.YANG,X.ZHANG,T.PETRONZIO,A.FOMENKOV,G.G.WILSON, JRNL AUTH 2 R.J.ROBERTS,X.CHENG JRNL TITL STRUCTURE OF HHAI ENDONUCLEASE WITH COGNATE DNA AT AN ATOMIC JRNL TITL 2 RESOLUTION OF 1.0 ANGSTROM. JRNL REF NUCLEIC ACIDS RES. V. 48 1466 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 31879785 JRNL DOI 10.1093/NAR/GKZ1195 REMARK 2 REMARK 2 RESOLUTION. 2.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 17912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.0000 - 5.1300 1.00 2851 152 0.1940 0.2328 REMARK 3 2 5.1300 - 4.0700 1.00 2844 146 0.1747 0.2195 REMARK 3 3 4.0700 - 3.5600 1.00 2839 150 0.1989 0.2632 REMARK 3 4 3.5600 - 3.2300 1.00 2870 142 0.2186 0.2620 REMARK 3 5 3.2300 - 3.0000 1.00 2840 150 0.2522 0.2872 REMARK 3 6 3.0000 - 2.8200 0.98 2786 142 0.3399 0.4338 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.443 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.329 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2648 REMARK 3 ANGLE : 0.638 3701 REMARK 3 CHIRALITY : 0.044 407 REMARK 3 PLANARITY : 0.004 385 REMARK 3 DIHEDRAL : 22.770 972 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.1198 46.2940 -16.1009 REMARK 3 T TENSOR REMARK 3 T11: 0.6501 T22: 0.4217 REMARK 3 T33: 0.8994 T12: 0.0225 REMARK 3 T13: -0.0606 T23: 0.0606 REMARK 3 L TENSOR REMARK 3 L11: 7.5102 L22: 8.6654 REMARK 3 L33: 9.2467 L12: -5.2224 REMARK 3 L13: -5.6164 L23: 5.7181 REMARK 3 S TENSOR REMARK 3 S11: 0.7202 S12: 0.5305 S13: 0.4425 REMARK 3 S21: -0.4370 S22: -0.2661 S23: 0.5749 REMARK 3 S31: -1.4899 S32: -0.1282 S33: -0.4968 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 19 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2387 42.1731 -6.6784 REMARK 3 T TENSOR REMARK 3 T11: 0.8292 T22: 0.6188 REMARK 3 T33: 1.0944 T12: 0.2140 REMARK 3 T13: 0.1824 T23: -0.0724 REMARK 3 L TENSOR REMARK 3 L11: 8.3677 L22: 2.1681 REMARK 3 L33: 9.1664 L12: 9.8069 REMARK 3 L13: -3.0409 L23: -2.0824 REMARK 3 S TENSOR REMARK 3 S11: -1.0098 S12: -0.7898 S13: -1.0895 REMARK 3 S21: -0.3174 S22: 0.5865 S23: -1.4294 REMARK 3 S31: 0.0982 S32: 1.4509 S33: 0.3453 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 35 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.4456 37.6117 -11.3287 REMARK 3 T TENSOR REMARK 3 T11: 0.3390 T22: 0.4936 REMARK 3 T33: 0.5858 T12: -0.0655 REMARK 3 T13: 0.1199 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 2.0463 L22: 5.2073 REMARK 3 L33: 5.8820 L12: -3.8709 REMARK 3 L13: -0.1701 L23: 2.6244 REMARK 3 S TENSOR REMARK 3 S11: -0.0947 S12: 0.0403 S13: -0.2674 REMARK 3 S21: 0.0269 S22: 0.1397 S23: 0.6271 REMARK 3 S31: -0.1776 S32: -0.7409 S33: -0.0606 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 56 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4286 12.8122 -8.9480 REMARK 3 T TENSOR REMARK 3 T11: 0.8084 T22: 0.5864 REMARK 3 T33: 0.8219 T12: -0.1690 REMARK 3 T13: 0.0261 T23: 0.1030 REMARK 3 L TENSOR REMARK 3 L11: 2.6736 L22: 7.6864 REMARK 3 L33: 9.0019 L12: 4.9766 REMARK 3 L13: 3.0791 L23: -2.2305 REMARK 3 S TENSOR REMARK 3 S11: 0.4375 S12: -0.6238 S13: -1.5811 REMARK 3 S21: 2.1925 S22: -0.0806 S23: -0.0063 REMARK 3 S31: 0.8205 S32: 0.1728 S33: -0.3940 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 80 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1135 9.3897 -16.1991 REMARK 3 T TENSOR REMARK 3 T11: 0.7188 T22: 0.5358 REMARK 3 T33: 0.9653 T12: -0.1401 REMARK 3 T13: 0.0919 T23: -0.1101 REMARK 3 L TENSOR REMARK 3 L11: 2.2715 L22: 6.5773 REMARK 3 L33: 7.9215 L12: -8.1008 REMARK 3 L13: -0.1414 L23: -0.1631 REMARK 3 S TENSOR REMARK 3 S11: -0.0200 S12: -0.4061 S13: -1.7369 REMARK 3 S21: -0.1270 S22: -0.2562 S23: 1.1456 REMARK 3 S31: 2.0549 S32: 0.0649 S33: -0.1231 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 97 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2895 26.6848 -16.9425 REMARK 3 T TENSOR REMARK 3 T11: 0.4771 T22: 0.4832 REMARK 3 T33: 0.4247 T12: -0.1300 REMARK 3 T13: 0.1046 T23: -0.0805 REMARK 3 L TENSOR REMARK 3 L11: 4.2222 L22: 4.7099 REMARK 3 L33: 2.3603 L12: 0.4292 REMARK 3 L13: 0.2217 L23: 0.5994 REMARK 3 S TENSOR REMARK 3 S11: -0.1810 S12: 0.0960 S13: -0.1246 REMARK 3 S21: 0.0187 S22: 0.1388 S23: 0.5273 REMARK 3 S31: 0.0289 S32: 0.0463 S33: -0.0012 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 166 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7475 39.2470 -10.4569 REMARK 3 T TENSOR REMARK 3 T11: 0.9886 T22: 1.4433 REMARK 3 T33: 1.1031 T12: -0.3785 REMARK 3 T13: 0.0141 T23: -0.5099 REMARK 3 L TENSOR REMARK 3 L11: 7.3806 L22: 0.6235 REMARK 3 L33: 7.7643 L12: -0.7467 REMARK 3 L13: -2.2314 L23: 1.3088 REMARK 3 S TENSOR REMARK 3 S11: 0.8502 S12: -0.3038 S13: -0.1858 REMARK 3 S21: -0.1396 S22: 0.6337 S23: -1.4576 REMARK 3 S31: -1.0432 S32: 1.9194 S33: -1.4882 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 199 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1066 33.1741 -11.9921 REMARK 3 T TENSOR REMARK 3 T11: 0.5808 T22: 0.7289 REMARK 3 T33: 0.7050 T12: -0.0867 REMARK 3 T13: -0.0891 T23: -0.1767 REMARK 3 L TENSOR REMARK 3 L11: 9.7954 L22: 2.3993 REMARK 3 L33: 5.3525 L12: 7.7677 REMARK 3 L13: -5.6675 L23: -5.7428 REMARK 3 S TENSOR REMARK 3 S11: -0.0230 S12: 0.0548 S13: -0.8249 REMARK 3 S21: 0.4486 S22: 0.1117 S23: -1.1859 REMARK 3 S31: -0.3721 S32: 0.2317 S33: 0.0430 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 228 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1337 27.5576 -22.9252 REMARK 3 T TENSOR REMARK 3 T11: 0.6156 T22: 0.4861 REMARK 3 T33: 0.6058 T12: -0.1402 REMARK 3 T13: 0.0050 T23: -0.1168 REMARK 3 L TENSOR REMARK 3 L11: 7.8183 L22: 6.8429 REMARK 3 L33: 0.4977 L12: -4.6017 REMARK 3 L13: -2.3633 L23: 1.0521 REMARK 3 S TENSOR REMARK 3 S11: 0.4742 S12: 0.8310 S13: -0.5757 REMARK 3 S21: -1.3333 S22: -0.4583 S23: 0.5301 REMARK 3 S31: 0.0745 S32: 0.0506 S33: -0.2192 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 242 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9509 40.9017 -16.8956 REMARK 3 T TENSOR REMARK 3 T11: 0.6423 T22: 0.7267 REMARK 3 T33: 1.5345 T12: 0.1991 REMARK 3 T13: -0.0870 T23: 0.1003 REMARK 3 L TENSOR REMARK 3 L11: 2.4602 L22: 7.5035 REMARK 3 L33: 6.8263 L12: 2.3031 REMARK 3 L13: 2.7150 L23: 5.4652 REMARK 3 S TENSOR REMARK 3 S11: -0.4475 S12: -0.3565 S13: 0.4673 REMARK 3 S21: -0.1394 S22: 0.8879 S23: 1.1847 REMARK 3 S31: 0.2193 S32: -0.8139 S33: -0.3057 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5583 29.0696 -11.2627 REMARK 3 T TENSOR REMARK 3 T11: 0.7137 T22: 1.1506 REMARK 3 T33: 0.5957 T12: -0.1176 REMARK 3 T13: -0.0958 T23: 0.0899 REMARK 3 L TENSOR REMARK 3 L11: 0.9793 L22: 9.5345 REMARK 3 L33: 2.3947 L12: 0.8327 REMARK 3 L13: 0.7798 L23: 2.8090 REMARK 3 S TENSOR REMARK 3 S11: 0.3293 S12: 0.6281 S13: -0.0178 REMARK 3 S21: 1.0464 S22: -0.3790 S23: -1.4953 REMARK 3 S31: -0.4648 S32: 2.1782 S33: 0.1595 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0093 27.7603 -11.1604 REMARK 3 T TENSOR REMARK 3 T11: 0.6093 T22: 0.8564 REMARK 3 T33: 0.5013 T12: -0.2254 REMARK 3 T13: -0.0546 T23: 0.1469 REMARK 3 L TENSOR REMARK 3 L11: 6.2889 L22: 6.6503 REMARK 3 L33: 9.7820 L12: -0.4274 REMARK 3 L13: -3.8792 L23: -1.7741 REMARK 3 S TENSOR REMARK 3 S11: 0.4257 S12: -1.1057 S13: -0.4070 REMARK 3 S21: 0.5824 S22: 0.2164 S23: -0.4364 REMARK 3 S31: 1.0179 S32: -0.6114 S33: -0.6637 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UKH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17964 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.820 REMARK 200 RESOLUTION RANGE LOW (A) : 33.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 1.68500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 6UKE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% V/V 2-PROPANOL, 0.1 M MES/SODIUM REMARK 280 HYDROXIDE, PH 6.0, 0.2 M CALCIUM ACETATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.53600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.62850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.62850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.76800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.62850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.62850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 128.30400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.62850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.62850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.76800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.62850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.62850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 128.30400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 85.53600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DA A 14 REMARK 465 DT B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS X 4 CG CD CE NZ REMARK 470 PHE X 9 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS X 25 CE NZ REMARK 470 GLU X 27 CG CD OE1 OE2 REMARK 470 SER X 33 OG REMARK 470 ASN X 41 CG OD1 ND2 REMARK 470 GLU X 65 CG CD OE1 OE2 REMARK 470 LYS X 67 CG CD CE NZ REMARK 470 LYS X 73 CG CD CE NZ REMARK 470 LYS X 75 CG CD CE NZ REMARK 470 ILE X 78 CG1 CG2 CD1 REMARK 470 GLU X 95 CG CD OE1 OE2 REMARK 470 LYS X 104 CE NZ REMARK 470 LYS X 127 CG CD CE NZ REMARK 470 ASP X 135 CG OD1 OD2 REMARK 470 ILE X 137 CG1 CG2 CD1 REMARK 470 LYS X 173 CG CD CE NZ REMARK 470 LYS X 178 CD CE NZ REMARK 470 LYS X 179 CG CD CE NZ REMARK 470 THR X 184 OG1 CG2 REMARK 470 MET X 185 CG SD CE REMARK 470 ARG X 186 CG CD NE CZ NH1 NH2 REMARK 470 GLU X 189 CG CD OE1 OE2 REMARK 470 ASP X 193 CG OD1 OD2 REMARK 470 GLU X 194 CG CD OE1 OE2 REMARK 470 LYS X 199 CG CD CE NZ REMARK 470 ASP X 204 CG OD1 OD2 REMARK 470 ASP X 205 CG OD1 OD2 REMARK 470 GLU X 212 CG CD OE1 OE2 REMARK 470 ASN X 213 CG OD1 ND2 REMARK 470 ASN X 214 CG OD1 ND2 REMARK 470 ASN X 238 CG OD1 ND2 REMARK 470 ASN X 239 CG OD1 ND2 REMARK 470 PHE X 243 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU X 258 CG CD1 CD2 REMARK 470 DC B 2 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR X 38 50.25 -94.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU X 7 OE1 REMARK 620 2 ASP X 34 OD2 68.5 REMARK 620 3 GLU X 46 OE1 144.6 76.7 REMARK 620 4 ALA X 47 O 85.3 91.5 102.5 REMARK 620 5 DC A 9 OP1 92.9 105.0 89.6 161.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP X 34 OD1 REMARK 620 2 HOH X 405 O 70.8 REMARK 620 3 DG A 8 O3' 133.2 98.6 REMARK 620 4 DC A 9 OP1 78.2 85.5 55.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA X 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 101 DBREF 6UKH X 1 258 UNP I3DBY6 I3DBY6_HAEPH 1 258 DBREF 6UKH A 1 14 PDB 6UKH 6UKH 1 14 DBREF 6UKH B 1 14 PDB 6UKH 6UKH 1 14 SEQRES 1 X 258 MET ASN TRP LYS GLU PHE GLU VAL PHE CYS VAL THR TYR SEQRES 2 X 258 LEU ASN LYS THR TYR GLY ASN LYS PHE ALA LYS LYS GLY SEQRES 3 X 258 GLU SER ASP SER THR THR SER ASP ILE LEU PHE THR GLY SEQRES 4 X 258 ASN ASN PRO PHE TYR ILE GLU ALA LYS MET PRO HIS SER SEQRES 5 X 258 GLN CYS GLY GLN PHE VAL LEU ILE PRO ASN ARG ALA GLU SEQRES 6 X 258 TYR LYS PHE ASP TYR SER PRO LYS ASN LYS SER GLU ILE SEQRES 7 X 258 ASN PRO TYR THR GLN LYS ILE MET GLN PHE MET SER GLU SEQRES 8 X 258 ASN PHE SER GLU TYR ALA ASN LEU SER THR LYS GLY LYS SEQRES 9 X 258 ILE ILE PRO LEU PRO GLU SER VAL PHE VAL ASN TRP ILE SEQRES 10 X 258 LYS GLU TYR TYR LYS SER LYS SER VAL LYS PHE PHE ILE SEQRES 11 X 258 THR SER ASN GLY ASP PHE ILE ILE PHE PRO ILE GLU HIS SEQRES 12 X 258 PHE GLU HIS TYR PHE ASN VAL SER CYS THR TYR ARG ILE SEQRES 13 X 258 LYS LYS SER GLY SER ARG HIS LEU ASN SER LYS SER LEU SEQRES 14 X 258 PRO ASP PHE LYS GLN ALA LEU ASP LYS LYS GLY ILE SER SEQRES 15 X 258 TYR THR MET ARG GLY LEU GLU LEU HIS SER ASP GLU ASN SEQRES 16 X 258 ILE HIS ASP LYS ARG ILE SER GLY ASP ASP LYS ASP PHE SEQRES 17 X 258 LEU ILE LYS GLU ASN ASN GLY ALA TYR HIS VAL LYS ILE SEQRES 18 X 258 LEU SER ASN THR PHE ASN ALA ASN VAL ILE PHE SER ILE SEQRES 19 X 258 SER LEU LYS ASN ASN ILE SER LEU PHE ILE LEU ASN GLU SEQRES 20 X 258 ASP ARG LYS ALA PHE GLU ALA ALA ILE SER LEU SEQRES 1 A 14 DC DT DG DT DT DG DC DG DC DT DT DG DG SEQRES 2 A 14 DA SEQRES 1 B 14 DT DC DC DA DA DG DC DG DC DA DA DC DA SEQRES 2 B 14 DG HET CA X 301 1 HET CA A 101 1 HETNAM CA CALCIUM ION FORMUL 4 CA 2(CA 2+) FORMUL 6 HOH *11(H2 O) HELIX 1 AA1 ASN X 2 GLY X 19 1 18 HELIX 2 AA2 ASN X 79 ASN X 92 1 14 HELIX 3 AA3 ASN X 92 ASN X 98 1 7 HELIX 4 AA4 PRO X 109 LYS X 124 1 16 HELIX 5 AA5 GLU X 142 HIS X 146 5 5 HELIX 6 AA6 SER X 168 LYS X 178 1 11 HELIX 7 AA7 SER X 241 ILE X 256 1 16 SHEET 1 AA1 5 PHE X 22 LYS X 24 0 SHEET 2 AA1 5 ILE X 35 PHE X 37 -1 O LEU X 36 N ALA X 23 SHEET 3 AA1 5 PHE X 43 ALA X 47 -1 O ILE X 45 N ILE X 35 SHEET 4 AA1 5 VAL X 126 SER X 132 1 O LYS X 127 N TYR X 44 SHEET 5 AA1 5 PHE X 136 PRO X 140 -1 O ILE X 137 N THR X 131 SHEET 1 AA2 5 LYS X 67 TYR X 70 0 SHEET 2 AA2 5 HIS X 51 ASN X 62 -1 N ILE X 60 O ASP X 69 SHEET 3 AA2 5 PHE X 226 LEU X 236 -1 O VAL X 230 N PHE X 57 SHEET 4 AA2 5 PHE X 148 LYS X 158 -1 N SER X 151 O SER X 233 SHEET 5 AA2 5 LYS X 104 ILE X 105 -1 N LYS X 104 O TYR X 154 SHEET 1 AA3 4 ARG X 162 HIS X 163 0 SHEET 2 AA3 4 TYR X 217 ILE X 221 -1 O ILE X 221 N ARG X 162 SHEET 3 AA3 4 LYS X 206 GLU X 212 -1 N LYS X 211 O HIS X 218 SHEET 4 AA3 4 LYS X 199 GLY X 203 -1 N ILE X 201 O PHE X 208 SHEET 1 AA4 2 THR X 184 ARG X 186 0 SHEET 2 AA4 2 GLU X 189 HIS X 191 -1 O HIS X 191 N THR X 184 LINK OE1 GLU X 7 CA CA X 301 1555 1555 3.01 LINK OD2 ASP X 34 CA CA X 301 1555 1555 2.46 LINK OD1 ASP X 34 CA CA A 101 1555 1555 2.32 LINK OE1 GLU X 46 CA CA X 301 1555 1555 2.69 LINK O ALA X 47 CA CA X 301 1555 1555 2.26 LINK CA CA X 301 OP1 DC A 9 1555 1555 2.06 LINK O HOH X 405 CA CA A 101 1555 1555 2.63 LINK O3' DG A 8 CA CA A 101 1555 1555 2.57 LINK OP1 DC A 9 CA CA A 101 1555 1555 2.62 SITE 1 AC1 5 DC A 9 GLU X 7 ASP X 34 GLU X 46 SITE 2 AC1 5 ALA X 47 SITE 1 AC2 5 DG A 8 DC A 9 ASP X 34 GLU X 46 SITE 2 AC2 5 HOH X 405 CRYST1 67.257 67.257 171.072 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014868 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014868 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005845 0.00000