HEADER TOXIN/ANTITOXIN 06-OCT-19 6UL4 TITLE CRYSTAL STRUCTURE OF BONT/B RECEPTOR-BINDING DOMAIN IN COMPLEX WITH TITLE 2 VHH JLO-G11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOTULINUM NEUROTOXIN TYPE B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR-BINDING DOMAIN; COMPND 5 SYNONYM: BONT/B,BONTOXILYSIN-B; COMPND 6 EC: 3.4.24.69; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: VHH JLO-G11; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM; SOURCE 3 ORGANISM_TAXID: 1491; SOURCE 4 GENE: BOTB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 9 ORGANISM_TAXID: 30538; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BOTULINUM NEUROTOXIN (BONT), VHH, RECEPTOR-BINDING DOMAIN, TOXIN, KEYWDS 2 ANTITOXIN, TOXIN-ANTITOXIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.LAM,R.JIN REVDAT 2 11-OCT-23 6UL4 1 REMARK REVDAT 1 04-MAR-20 6UL4 0 JRNL AUTH K.LAM,J.M.TREMBLAY,E.VAZQUEZ-CINTRON,K.PERRY,C.ONDECK, JRNL AUTH 2 R.WEBB,P.M.MCNUTT,C.B.SHOEMAKER,R.JIN JRNL TITL STRUCTURAL INSIGHTS INTO RATIONAL DESIGN OF SINGLE-DOMAIN JRNL TITL 2 ANTIBODY-BASED ANTITOXINS AGAINST BOTULINUM NEUROTOXINS JRNL REF CELL REP V. 30 2526 2020 JRNL REFN ESSN 2211-1247 JRNL DOI 10.1016/J.CELREP.2020.01.107 REMARK 2 REMARK 2 RESOLUTION. 3.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.335 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 18355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.713 REMARK 3 FREE R VALUE TEST SET COUNT : 865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.3837 - 3.1842 0.90 2596 170 0.3523 0.3977 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.536 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 91.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4709 REMARK 3 ANGLE : 0.810 6353 REMARK 3 CHIRALITY : 0.041 657 REMARK 3 PLANARITY : 0.003 815 REMARK 3 DIHEDRAL : 12.979 1745 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 861 THROUGH 912 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0333 -81.5208 8.9110 REMARK 3 T TENSOR REMARK 3 T11: 0.7271 T22: 0.8516 REMARK 3 T33: 0.8094 T12: -0.0461 REMARK 3 T13: -0.0266 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.7332 L22: 2.6290 REMARK 3 L33: 3.5897 L12: -1.8329 REMARK 3 L13: -1.3428 L23: 0.1812 REMARK 3 S TENSOR REMARK 3 S11: -0.1636 S12: 0.0873 S13: -0.1415 REMARK 3 S21: 0.0518 S22: -0.0973 S23: -0.1091 REMARK 3 S31: 0.2703 S32: 0.0429 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 913 THROUGH 934 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0673 -83.2580 19.6957 REMARK 3 T TENSOR REMARK 3 T11: 1.1742 T22: 1.1269 REMARK 3 T33: 1.0218 T12: 0.1797 REMARK 3 T13: -0.0274 T23: 0.0759 REMARK 3 L TENSOR REMARK 3 L11: 1.1907 L22: 1.0218 REMARK 3 L33: 1.5809 L12: 1.0571 REMARK 3 L13: -0.8854 L23: -0.0095 REMARK 3 S TENSOR REMARK 3 S11: -0.2953 S12: -0.5819 S13: -0.3660 REMARK 3 S21: 0.4429 S22: 0.1657 S23: -0.4333 REMARK 3 S31: 1.1682 S32: 0.6675 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 935 THROUGH 1089 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1229 -73.7650 24.2487 REMARK 3 T TENSOR REMARK 3 T11: 0.8321 T22: 1.0009 REMARK 3 T33: 0.7266 T12: -0.0040 REMARK 3 T13: 0.0316 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 3.0862 L22: 4.7209 REMARK 3 L33: 2.1956 L12: -2.2318 REMARK 3 L13: 0.0672 L23: -0.4946 REMARK 3 S TENSOR REMARK 3 S11: -0.2530 S12: -0.6042 S13: -0.0570 REMARK 3 S21: 0.7304 S22: 0.2920 S23: 0.0250 REMARK 3 S31: 0.2942 S32: 0.2243 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1090 THROUGH 1149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8747 -49.9993 13.9935 REMARK 3 T TENSOR REMARK 3 T11: 0.7047 T22: 0.8834 REMARK 3 T33: 0.8105 T12: -0.0266 REMARK 3 T13: 0.0407 T23: -0.0506 REMARK 3 L TENSOR REMARK 3 L11: 1.5755 L22: 4.0173 REMARK 3 L33: 2.1867 L12: -1.1208 REMARK 3 L13: -0.0037 L23: -0.7872 REMARK 3 S TENSOR REMARK 3 S11: -0.1247 S12: -0.3188 S13: 0.0146 REMARK 3 S21: 0.5464 S22: 0.2274 S23: 0.3663 REMARK 3 S31: -0.1375 S32: -0.0591 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1150 THROUGH 1221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.2489 -43.1195 1.1080 REMARK 3 T TENSOR REMARK 3 T11: 0.8565 T22: 0.8779 REMARK 3 T33: 0.9190 T12: -0.0753 REMARK 3 T13: 0.0911 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 3.6368 L22: 2.6141 REMARK 3 L33: 2.5205 L12: -0.6272 REMARK 3 L13: 1.0499 L23: 0.0304 REMARK 3 S TENSOR REMARK 3 S11: 0.0851 S12: 0.3651 S13: 0.4069 REMARK 3 S21: -0.3027 S22: -0.1110 S23: -0.4462 REMARK 3 S31: -0.2681 S32: 0.3402 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1222 THROUGH 1291 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5945 -40.2645 12.4703 REMARK 3 T TENSOR REMARK 3 T11: 0.8929 T22: 0.9115 REMARK 3 T33: 0.9466 T12: -0.0866 REMARK 3 T13: -0.0322 T23: -0.0643 REMARK 3 L TENSOR REMARK 3 L11: 3.5913 L22: 4.7601 REMARK 3 L33: 3.3187 L12: -0.6571 REMARK 3 L13: -0.2320 L23: -0.1899 REMARK 3 S TENSOR REMARK 3 S11: -0.0889 S12: -0.0966 S13: 0.8971 REMARK 3 S21: 0.4162 S22: 0.0345 S23: -0.7100 REMARK 3 S31: -0.7401 S32: 0.3697 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.6585 -11.4026 9.1796 REMARK 3 T TENSOR REMARK 3 T11: 1.3305 T22: 1.2004 REMARK 3 T33: 1.7380 T12: 0.1195 REMARK 3 T13: 0.1337 T23: -0.1876 REMARK 3 L TENSOR REMARK 3 L11: 0.1823 L22: 0.2217 REMARK 3 L33: 0.0924 L12: 0.2614 REMARK 3 L13: 0.0358 L23: 0.0603 REMARK 3 S TENSOR REMARK 3 S11: 0.2165 S12: -0.9374 S13: 1.1609 REMARK 3 S21: -1.0173 S22: 0.2551 S23: 0.4011 REMARK 3 S31: -0.5669 S32: 0.2286 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8512 -3.9406 0.6057 REMARK 3 T TENSOR REMARK 3 T11: 1.7207 T22: 0.9332 REMARK 3 T33: 1.7189 T12: 0.0917 REMARK 3 T13: 0.1101 T23: 0.0738 REMARK 3 L TENSOR REMARK 3 L11: 0.8889 L22: 0.1699 REMARK 3 L33: 0.4455 L12: 0.2263 REMARK 3 L13: -0.5450 L23: 0.0020 REMARK 3 S TENSOR REMARK 3 S11: -0.0813 S12: 0.1328 S13: -0.3856 REMARK 3 S21: -0.4984 S22: 0.8809 S23: -0.2092 REMARK 3 S31: -0.7574 S32: -0.0499 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.0172 -18.7582 14.9529 REMARK 3 T TENSOR REMARK 3 T11: 1.5299 T22: 1.1417 REMARK 3 T33: 1.1410 T12: 0.0102 REMARK 3 T13: 0.0543 T23: -0.1265 REMARK 3 L TENSOR REMARK 3 L11: 0.0445 L22: 0.1253 REMARK 3 L33: 0.0698 L12: 0.0667 REMARK 3 L13: -0.0657 L23: -0.1068 REMARK 3 S TENSOR REMARK 3 S11: -0.6034 S12: -0.4164 S13: -0.2220 REMARK 3 S21: 1.1105 S22: -0.2979 S23: 0.8718 REMARK 3 S31: -0.7065 S32: 0.3429 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.7298 -18.3414 -1.7760 REMARK 3 T TENSOR REMARK 3 T11: 1.3347 T22: 1.1512 REMARK 3 T33: 1.8954 T12: 0.0261 REMARK 3 T13: -0.1269 T23: -0.1212 REMARK 3 L TENSOR REMARK 3 L11: 0.1995 L22: 0.0182 REMARK 3 L33: 0.1432 L12: -0.1084 REMARK 3 L13: -0.0323 L23: 0.0614 REMARK 3 S TENSOR REMARK 3 S11: -0.7164 S12: 0.2424 S13: -0.0026 REMARK 3 S21: -0.9995 S22: 0.0547 S23: 1.6155 REMARK 3 S31: -0.2500 S32: -1.0698 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.3367 -16.8992 -0.2945 REMARK 3 T TENSOR REMARK 3 T11: 1.2651 T22: 0.9740 REMARK 3 T33: 1.8720 T12: -0.0323 REMARK 3 T13: 0.1817 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.3801 L22: 0.0519 REMARK 3 L33: 0.8058 L12: 0.0260 REMARK 3 L13: -0.5884 L23: 0.0106 REMARK 3 S TENSOR REMARK 3 S11: 0.5739 S12: 0.2180 S13: 0.8202 REMARK 3 S21: -0.0114 S22: -0.4169 S23: -0.8139 REMARK 3 S31: 0.7573 S32: -0.0946 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.7290 -11.5051 -9.7264 REMARK 3 T TENSOR REMARK 3 T11: 1.9808 T22: 0.9220 REMARK 3 T33: 1.4281 T12: -0.0261 REMARK 3 T13: 0.0076 T23: -0.0670 REMARK 3 L TENSOR REMARK 3 L11: 0.0688 L22: 0.0376 REMARK 3 L33: 0.0745 L12: 0.0033 REMARK 3 L13: -0.0201 L23: -0.0416 REMARK 3 S TENSOR REMARK 3 S11: 0.9145 S12: -0.5036 S13: -0.5471 REMARK 3 S21: 0.1134 S22: -0.7945 S23: 0.8594 REMARK 3 S31: 0.1407 S32: -0.1351 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.4588 -8.3902 1.0833 REMARK 3 T TENSOR REMARK 3 T11: 1.3768 T22: 1.1232 REMARK 3 T33: 1.6245 T12: 0.0316 REMARK 3 T13: 0.0431 T23: -0.0807 REMARK 3 L TENSOR REMARK 3 L11: 1.4358 L22: 0.5833 REMARK 3 L33: 0.7206 L12: 0.3788 REMARK 3 L13: -1.0556 L23: 0.0298 REMARK 3 S TENSOR REMARK 3 S11: 0.3810 S12: 0.0995 S13: 0.5062 REMARK 3 S21: 0.3306 S22: -0.5398 S23: 0.5218 REMARK 3 S31: 0.3957 S32: -0.0969 S33: 0.0000 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.0324 -21.5921 1.7913 REMARK 3 T TENSOR REMARK 3 T11: 1.2587 T22: 0.9317 REMARK 3 T33: 1.4838 T12: -0.0176 REMARK 3 T13: 0.0632 T23: -0.0858 REMARK 3 L TENSOR REMARK 3 L11: 0.5928 L22: 0.6772 REMARK 3 L33: 1.1942 L12: 0.6007 REMARK 3 L13: -0.0173 L23: 0.3687 REMARK 3 S TENSOR REMARK 3 S11: 0.1790 S12: 0.3313 S13: 1.2668 REMARK 3 S21: -0.0829 S22: -0.4238 S23: 0.8565 REMARK 3 S31: 0.2327 S32: -0.0184 S33: 0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 110 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.9196 -23.3271 6.7358 REMARK 3 T TENSOR REMARK 3 T11: 1.3226 T22: 1.1125 REMARK 3 T33: 1.6482 T12: -0.0524 REMARK 3 T13: 0.1709 T23: -0.0715 REMARK 3 L TENSOR REMARK 3 L11: 0.0863 L22: 0.1342 REMARK 3 L33: 0.0484 L12: 0.1301 REMARK 3 L13: 0.0317 L23: 0.0069 REMARK 3 S TENSOR REMARK 3 S11: 0.1922 S12: -1.1673 S13: -0.0651 REMARK 3 S21: 0.4484 S22: -0.1989 S23: -0.6094 REMARK 3 S31: -1.0441 S32: -0.3485 S33: 0.0000 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.0457 -5.9642 -3.4616 REMARK 3 T TENSOR REMARK 3 T11: 1.1722 T22: 0.9824 REMARK 3 T33: 1.7545 T12: 0.1664 REMARK 3 T13: 0.3598 T23: 0.1208 REMARK 3 L TENSOR REMARK 3 L11: 0.0376 L22: 0.0430 REMARK 3 L33: 0.1553 L12: -0.0662 REMARK 3 L13: -0.0111 L23: 0.0849 REMARK 3 S TENSOR REMARK 3 S11: -0.7851 S12: 0.3434 S13: -0.4362 REMARK 3 S21: -1.3205 S22: -0.0951 S23: 0.2758 REMARK 3 S31: -0.8934 S32: 0.2859 S33: -0.0084 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UL4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244777. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 1.9_1692 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18645 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.180 REMARK 200 RESOLUTION RANGE LOW (A) : 144.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.15300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.40 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2NM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % ETHANOL, 0.1 M TRIS, PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.34650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.34650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.14950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 133.95250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.14950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 133.95250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.34650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.14950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 133.95250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.34650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.14950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 133.95250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 854 REMARK 465 PRO A 855 REMARK 465 LEU A 856 REMARK 465 GLY A 857 REMARK 465 SER A 858 REMARK 465 GLU A 859 REMARK 465 ILE A 860 REMARK 465 ASN A 1152 REMARK 465 SER A 1153 REMARK 465 GLN A 1154 REMARK 465 MET B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 MET B -13 REMARK 465 ALA B -12 REMARK 465 SER B -11 REMARK 465 MET B -10 REMARK 465 THR B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 465 GLN B -6 REMARK 465 GLN B -5 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 GLN B 1 REMARK 465 GLU B 127 REMARK 465 PRO B 128 REMARK 465 LYS B 129 REMARK 465 THR B 130 REMARK 465 PRO B 131 REMARK 465 LYS B 132 REMARK 465 PRO B 133 REMARK 465 GLN B 134 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 920 CG OD1 ND2 REMARK 470 ASN A1130 CG OD1 ND2 REMARK 470 LYS B 43 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 867 80.56 -150.02 REMARK 500 SER A 907 65.29 -103.56 REMARK 500 ILE A 917 -78.45 -128.22 REMARK 500 SER A 921 -52.07 -142.24 REMARK 500 TYR A 937 150.29 -46.60 REMARK 500 ASN A1010 -133.54 -115.95 REMARK 500 ASN A1012 -51.51 -120.71 REMARK 500 ARG A1032 -124.74 -110.70 REMARK 500 THR A1051 33.95 -96.92 REMARK 500 ASN A1063 50.78 -101.80 REMARK 500 ASN A1128 59.87 -110.79 REMARK 500 ASN A1130 43.71 -104.44 REMARK 500 ASN A1157 -132.38 55.48 REMARK 500 ASP A1159 38.32 -91.22 REMARK 500 LEU A1174 -109.20 53.89 REMARK 500 LYS A1188 -171.74 -64.90 REMARK 500 PRO A1197 151.89 -45.76 REMARK 500 PRO A1217 108.04 -55.76 REMARK 500 SER A1231 -169.10 -70.95 REMARK 500 GLU A1245 -46.13 -144.04 REMARK 500 SER A1246 -144.08 -116.65 REMARK 500 PRO B 14 108.08 -56.51 REMARK 500 SER B 54 -140.42 -97.06 REMARK 500 SER B 57 143.00 179.34 REMARK 500 SER B 85 60.20 25.81 REMARK 500 TRP B 116 -163.74 60.15 REMARK 500 REMARK 500 REMARK: NULL DBREF 6UL4 A 859 1291 UNP P10844 BXB_CLOBO 859 1291 DBREF 6UL4 B -20 134 PDB 6UL4 6UL4 -20 134 SEQADV 6UL4 GLY A 854 UNP P10844 EXPRESSION TAG SEQADV 6UL4 PRO A 855 UNP P10844 EXPRESSION TAG SEQADV 6UL4 LEU A 856 UNP P10844 EXPRESSION TAG SEQADV 6UL4 GLY A 857 UNP P10844 EXPRESSION TAG SEQADV 6UL4 SER A 858 UNP P10844 EXPRESSION TAG SEQRES 1 A 438 GLY PRO LEU GLY SER GLU ILE LEU ASN ASN ILE ILE LEU SEQRES 2 A 438 ASN LEU ARG TYR LYS ASP ASN ASN LEU ILE ASP LEU SER SEQRES 3 A 438 GLY TYR GLY ALA LYS VAL GLU VAL TYR ASP GLY VAL GLU SEQRES 4 A 438 LEU ASN ASP LYS ASN GLN PHE LYS LEU THR SER SER ALA SEQRES 5 A 438 ASN SER LYS ILE ARG VAL THR GLN ASN GLN ASN ILE ILE SEQRES 6 A 438 PHE ASN SER VAL PHE LEU ASP PHE SER VAL SER PHE TRP SEQRES 7 A 438 ILE ARG ILE PRO LYS TYR LYS ASN ASP GLY ILE GLN ASN SEQRES 8 A 438 TYR ILE HIS ASN GLU TYR THR ILE ILE ASN CYS MET LYS SEQRES 9 A 438 ASN ASN SER GLY TRP LYS ILE SER ILE ARG GLY ASN ARG SEQRES 10 A 438 ILE ILE TRP THR LEU ILE ASP ILE ASN GLY LYS THR LYS SEQRES 11 A 438 SER VAL PHE PHE GLU TYR ASN ILE ARG GLU ASP ILE SER SEQRES 12 A 438 GLU TYR ILE ASN ARG TRP PHE PHE VAL THR ILE THR ASN SEQRES 13 A 438 ASN LEU ASN ASN ALA LYS ILE TYR ILE ASN GLY LYS LEU SEQRES 14 A 438 GLU SER ASN THR ASP ILE LYS ASP ILE ARG GLU VAL ILE SEQRES 15 A 438 ALA ASN GLY GLU ILE ILE PHE LYS LEU ASP GLY ASP ILE SEQRES 16 A 438 ASP ARG THR GLN PHE ILE TRP MET LYS TYR PHE SER ILE SEQRES 17 A 438 PHE ASN THR GLU LEU SER GLN SER ASN ILE GLU GLU ARG SEQRES 18 A 438 TYR LYS ILE GLN SER TYR SER GLU TYR LEU LYS ASP PHE SEQRES 19 A 438 TRP GLY ASN PRO LEU MET TYR ASN LYS GLU TYR TYR MET SEQRES 20 A 438 PHE ASN ALA GLY ASN LYS ASN SER TYR ILE LYS LEU LYS SEQRES 21 A 438 LYS ASP SER PRO VAL GLY GLU ILE LEU THR ARG SER LYS SEQRES 22 A 438 TYR ASN GLN ASN SER LYS TYR ILE ASN TYR ARG ASP LEU SEQRES 23 A 438 TYR ILE GLY GLU LYS PHE ILE ILE ARG ARG LYS SER ASN SEQRES 24 A 438 SER GLN SER ILE ASN ASP ASP ILE VAL ARG LYS GLU ASP SEQRES 25 A 438 TYR ILE TYR LEU ASP PHE PHE ASN LEU ASN GLN GLU TRP SEQRES 26 A 438 ARG VAL TYR THR TYR LYS TYR PHE LYS LYS GLU GLU GLU SEQRES 27 A 438 LYS LEU PHE LEU ALA PRO ILE SER ASP SER ASP GLU PHE SEQRES 28 A 438 TYR ASN THR ILE GLN ILE LYS GLU TYR ASP GLU GLN PRO SEQRES 29 A 438 THR TYR SER CYS GLN LEU LEU PHE LYS LYS ASP GLU GLU SEQRES 30 A 438 SER THR ASP GLU ILE GLY LEU ILE GLY ILE HIS ARG PHE SEQRES 31 A 438 TYR GLU SER GLY ILE VAL PHE GLU GLU TYR LYS ASP TYR SEQRES 32 A 438 PHE CYS ILE SER LYS TRP TYR LEU LYS GLU VAL LYS ARG SEQRES 33 A 438 LYS PRO TYR ASN LEU LYS LEU GLY CYS ASN TRP GLN PHE SEQRES 34 A 438 ILE PRO LYS ASP GLU GLY TRP THR GLU SEQRES 1 B 155 MET HIS HIS HIS HIS HIS HIS MET ALA SER MET THR GLY SEQRES 2 B 155 GLY GLN GLN MET GLY ARG GLY SER GLN VAL GLN LEU ALA SEQRES 3 B 155 GLU SER GLY GLY GLY LEU VAL GLN PRO GLY GLY SER LEU SEQRES 4 B 155 ARG LEU SER CYS GLU ALA SER GLY PHE HIS LEU GLU HIS SEQRES 5 B 155 PHE ALA VAL GLY TRP PHE ARG GLN ALA PRO GLY LYS GLU SEQRES 6 B 155 ARG GLU GLY VAL SER CYS ILE SER ALA SER GLY ASP SER SEQRES 7 B 155 THR THR TYR ALA ASP SER VAL LYS GLY ARG SER THR ILE SEQRES 8 B 155 SER LYS ASP ASN ALA LYS ASN ALA VAL TYR LEU GLN MET SEQRES 9 B 155 ASP SER LEU ARG PRO GLU ASP THR GLY ASP TYR TYR CYS SEQRES 10 B 155 ALA ALA SER HIS PHE SER VAL CYS GLY LYS ASN ILE ARG SEQRES 11 B 155 LYS ILE GLU TYR ARG TYR TRP GLY GLN GLY THR PRO VAL SEQRES 12 B 155 THR VAL SER SER GLU PRO LYS THR PRO LYS PRO GLN HELIX 1 AA1 GLY A 941 ASN A 948 1 8 HELIX 2 AA2 SER A 1067 TYR A 1080 1 14 HELIX 3 AA3 TRP A 1262 VAL A 1267 1 6 HELIX 4 AA4 ARG B 109 TYR B 113 5 5 SHEET 1 AA1 5 LEU A 875 ASP A 877 0 SHEET 2 AA1 5 ILE A 864 TYR A 870 -1 N ARG A 869 O ILE A 876 SHEET 3 AA1 5 ILE A1054 PHE A1062 -1 O ILE A1061 N ILE A 865 SHEET 4 AA1 5 GLN A 898 LEU A 901 -1 N LEU A 901 O ILE A1054 SHEET 5 AA1 5 GLU A 892 LEU A 893 -1 N GLU A 892 O LYS A 900 SHEET 1 AA2 7 LEU A 875 ASP A 877 0 SHEET 2 AA2 7 ILE A 864 TYR A 870 -1 N ARG A 869 O ILE A 876 SHEET 3 AA2 7 ILE A1054 PHE A1062 -1 O ILE A1061 N ILE A 865 SHEET 4 AA2 7 PHE A 926 ARG A 933 -1 N TRP A 931 O LYS A1057 SHEET 5 AA2 7 PHE A1003 ASN A1009 -1 O PHE A1003 N ILE A 932 SHEET 6 AA2 7 ASN A1013 ILE A1018 -1 O TYR A1017 N THR A1006 SHEET 7 AA2 7 LYS A1021 ASP A1027 -1 O GLU A1023 N ILE A1016 SHEET 1 AA3 7 LYS A 884 VAL A 887 0 SHEET 2 AA3 7 LYS A 908 THR A 912 -1 O THR A 912 N LYS A 884 SHEET 3 AA3 7 GLU A1039 GLY A1046 -1 O PHE A1042 N ILE A 909 SHEET 4 AA3 7 GLU A 949 LYS A 957 -1 N THR A 951 O ASP A1045 SHEET 5 AA3 7 SER A 960 ARG A 967 -1 O ILE A 964 N ILE A 952 SHEET 6 AA3 7 ARG A 970 ILE A 976 -1 O ILE A 972 N SER A 965 SHEET 7 AA3 7 THR A 982 GLU A 988 -1 O VAL A 985 N TRP A 973 SHEET 1 AA4 3 PHE A1194 PRO A1197 0 SHEET 2 AA4 3 GLN A1176 TYR A1183 -1 N ARG A1179 O ALA A1196 SHEET 3 AA4 3 PHE A1204 TYR A1205 -1 O TYR A1205 N THR A1182 SHEET 1 AA5 7 GLN A1176 TYR A1183 0 SHEET 2 AA5 7 TYR A1166 ASN A1173 -1 N PHE A1171 O TRP A1178 SHEET 3 AA5 7 ILE A1208 LYS A1211 -1 O ILE A1208 N ILE A1167 SHEET 4 AA5 7 CYS A1221 LYS A1226 -1 O GLN A1222 N LYS A1211 SHEET 5 AA5 7 GLU A1234 TYR A1244 -1 O GLY A1236 N PHE A1225 SHEET 6 AA5 7 TYR A1253 SER A1260 -1 O TYR A1256 N HIS A1241 SHEET 7 AA5 7 GLU A1190 LYS A1192 -1 N GLU A1191 O ILE A1259 SHEET 1 AA6 5 TYR A1166 ASN A1173 0 SHEET 2 AA6 5 LYS A1144 ARG A1149 -1 N LYS A1144 O PHE A1172 SHEET 3 AA6 5 GLU A1097 ASN A1102 -1 N TYR A1098 O PHE A1145 SHEET 4 AA6 5 ASN A1279 ILE A1283 -1 O ILE A1283 N TYR A1099 SHEET 5 AA6 5 CYS A1221 LYS A1226 -1 N CYS A1221 O TRP A1280 SHEET 1 AA7 2 SER A1108 LEU A1112 0 SHEET 2 AA7 2 GLY A1119 THR A1123 -1 O GLU A1120 N LYS A1111 SHEET 1 AA8 6 LEU B 11 VAL B 12 0 SHEET 2 AA8 6 THR B 120 VAL B 124 1 O THR B 123 N VAL B 12 SHEET 3 AA8 6 GLY B 92 ALA B 98 -1 N TYR B 94 O THR B 120 SHEET 4 AA8 6 VAL B 34 GLN B 39 -1 N PHE B 37 O TYR B 95 SHEET 5 AA8 6 GLU B 46 ILE B 51 -1 O VAL B 48 N TRP B 36 SHEET 6 AA8 6 THR B 58 TYR B 60 -1 O THR B 59 N CYS B 50 SHEET 1 AA9 3 LEU B 18 GLU B 23 0 SHEET 2 AA9 3 ALA B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 3 AA9 3 THR B 69 ASP B 73 -1 N ASP B 73 O ALA B 78 SSBOND 1 CYS B 50 CYS B 104 1555 1555 2.04 CISPEP 1 LYS A 1270 PRO A 1271 0 1.01 CISPEP 2 GLY B 117 GLN B 118 0 -3.51 CRYST1 56.299 267.905 144.693 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017762 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003733 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006911 0.00000