HEADER IMMUNE SYSTEM 07-OCT-19 6ULF TITLE CRYSTAL STRUCTURE OF 4498 FAB IN COMPLEX WITH CIRCUMSPOROZOITE PROTEIN TITLE 2 NDN3 AND ANTI-KAPPA VHH DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4498 FAB HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 4498 FAB LIGHT CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ANTI KAPPA VHH DOMAIN; COMPND 11 CHAIN: K; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: CIRCUMSPOROZOITE PROTEIN; COMPND 15 CHAIN: P; COMPND 16 SYNONYM: CS; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: CAMELIDAE MIXED LIBRARY; SOURCE 18 ORGANISM_TAXID: 1579311; SOURCE 19 MOL_ID: 4; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 22 ORGANISM_TAXID: 5833 KEYWDS MALARIA, ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR E.THAI,S.W.SCALLY,K.PRIETO,R.MURUGAN,H.WARDEMANN,J.P.JULIEN REVDAT 4 11-OCT-23 6ULF 1 REMARK REVDAT 3 29-JUL-20 6ULF 1 JRNL REVDAT 2 24-JUN-20 6ULF 1 JRNL REVDAT 1 17-JUN-20 6ULF 0 JRNL AUTH R.MURUGAN,S.W.SCALLY,G.COSTA,G.MUSTAFA,E.THAI,T.DECKER, JRNL AUTH 2 A.BOSCH,K.PRIETO,E.A.LEVASHINA,J.P.JULIEN,H.WARDEMANN JRNL TITL EVOLUTION OF PROTECTIVE HUMAN ANTIBODIES AGAINST PLASMODIUM JRNL TITL 2 FALCIPARUM CIRCUMSPOROZOITE PROTEIN REPEAT MOTIFS. JRNL REF NAT. MED. V. 26 1135 2020 JRNL REFN ISSN 1546-170X JRNL PMID 32451496 JRNL DOI 10.1038/S41591-020-0881-9 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18_3845 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 62266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.220 REMARK 3 FREE R VALUE TEST SET COUNT : 2003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0400 - 4.1000 1.00 4463 152 0.2022 0.2505 REMARK 3 2 4.0900 - 3.2500 0.99 4370 147 0.1883 0.1880 REMARK 3 3 3.2500 - 2.8400 0.99 4370 144 0.2024 0.2289 REMARK 3 4 2.8400 - 2.5800 0.99 4331 142 0.2112 0.2391 REMARK 3 5 2.5800 - 2.4000 0.99 4352 144 0.2192 0.2448 REMARK 3 6 2.4000 - 2.2500 0.98 4287 148 0.2121 0.2229 REMARK 3 7 2.2500 - 2.1400 0.98 4312 145 0.2049 0.2316 REMARK 3 8 2.1400 - 2.0500 0.98 4278 142 0.2048 0.2360 REMARK 3 9 2.0500 - 1.9700 0.98 4300 138 0.2107 0.2453 REMARK 3 10 1.9700 - 1.9000 0.97 4240 143 0.2098 0.2367 REMARK 3 11 1.9000 - 1.8400 0.97 4268 139 0.2271 0.3073 REMARK 3 12 1.8400 - 1.7900 0.97 4255 141 0.2344 0.2977 REMARK 3 13 1.7900 - 1.7400 0.97 4214 133 0.2459 0.2280 REMARK 3 14 1.7400 - 1.7000 0.97 4223 145 0.2591 0.3161 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.621 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4264 REMARK 3 ANGLE : 0.873 5824 REMARK 3 CHIRALITY : 0.060 663 REMARK 3 PLANARITY : 0.006 757 REMARK 3 DIHEDRAL : 16.528 1444 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN K REMARK 3 ORIGIN FOR THE GROUP (A): -27.3282 -15.1070 -15.0739 REMARK 3 T TENSOR REMARK 3 T11: 0.0791 T22: 0.1023 REMARK 3 T33: 0.0897 T12: 0.0005 REMARK 3 T13: 0.0047 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.9087 L22: 1.7286 REMARK 3 L33: 2.8878 L12: 0.0851 REMARK 3 L13: 0.2920 L23: -0.2175 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: 0.0214 S13: 0.0742 REMARK 3 S21: 0.0849 S22: -0.0070 S23: 0.0045 REMARK 3 S31: -0.0928 S32: 0.0481 S33: 0.0175 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN P REMARK 3 ORIGIN FOR THE GROUP (A): 12.3895 -6.6542 -12.7723 REMARK 3 T TENSOR REMARK 3 T11: 0.2232 T22: 0.3856 REMARK 3 T33: 0.3709 T12: 0.1255 REMARK 3 T13: -0.0089 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 7.7003 L22: 3.8730 REMARK 3 L33: 9.3075 L12: 0.2975 REMARK 3 L13: -1.6519 L23: -3.2349 REMARK 3 S TENSOR REMARK 3 S11: -0.0683 S12: 0.1571 S13: -0.5257 REMARK 3 S21: -0.0135 S22: -0.1280 S23: -1.7005 REMARK 3 S31: 0.5609 S32: 0.7082 S33: 0.1775 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 127) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1311 -0.5709 -6.2079 REMARK 3 T TENSOR REMARK 3 T11: 0.1040 T22: 0.1436 REMARK 3 T33: 0.1488 T12: 0.0188 REMARK 3 T13: -0.0167 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.6206 L22: 2.8765 REMARK 3 L33: 3.0249 L12: -0.6804 REMARK 3 L13: 0.0770 L23: 0.0518 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: -0.0137 S13: -0.0099 REMARK 3 S21: 0.0443 S22: -0.0073 S23: -0.2367 REMARK 3 S31: 0.0782 S32: 0.2947 S33: 0.0086 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 228) REMARK 3 ORIGIN FOR THE GROUP (A): -32.4819 18.1596 -7.7811 REMARK 3 T TENSOR REMARK 3 T11: 0.2382 T22: 0.1150 REMARK 3 T33: 0.1149 T12: 0.0205 REMARK 3 T13: 0.0447 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 3.5424 L22: 1.3156 REMARK 3 L33: 2.7914 L12: 0.4882 REMARK 3 L13: 0.6703 L23: 0.8187 REMARK 3 S TENSOR REMARK 3 S11: -0.1487 S12: 0.0435 S13: -0.0032 REMARK 3 S21: 0.0634 S22: 0.0568 S23: 0.1065 REMARK 3 S31: 0.1884 S32: -0.1199 S33: 0.0853 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 106) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4148 2.0536 -26.9675 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.2109 REMARK 3 T33: 0.1534 T12: 0.0338 REMARK 3 T13: 0.0318 T23: 0.0393 REMARK 3 L TENSOR REMARK 3 L11: 3.4731 L22: 1.4791 REMARK 3 L33: 2.6442 L12: -0.1778 REMARK 3 L13: 1.7101 L23: -0.0543 REMARK 3 S TENSOR REMARK 3 S11: 0.0355 S12: 0.3818 S13: 0.1199 REMARK 3 S21: -0.1986 S22: -0.1002 S23: -0.2249 REMARK 3 S31: 0.0198 S32: 0.5063 S33: 0.0669 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 213) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2849 28.1316 -18.6785 REMARK 3 T TENSOR REMARK 3 T11: 0.1379 T22: 0.1175 REMARK 3 T33: 0.1074 T12: -0.0233 REMARK 3 T13: -0.0018 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.8436 L22: 3.2867 REMARK 3 L33: 3.7548 L12: -0.8854 REMARK 3 L13: -0.3017 L23: 1.9372 REMARK 3 S TENSOR REMARK 3 S11: -0.0800 S12: -0.0981 S13: 0.0684 REMARK 3 S21: 0.3157 S22: 0.0791 S23: -0.0480 REMARK 3 S31: -0.1305 S32: 0.1169 S33: 0.0004 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ULF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000244814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62305 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6D01 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M PHOSPHATE-CITRATE PH 4.2, 20 % REMARK 280 (W/V) PEG 8000, 0.2 M SODIUM CHLORIDE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.04200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, K, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN P 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 1 CG CD OE1 NE2 REMARK 470 GLN A 13 CG CD OE1 NE2 REMARK 470 SER A 146 OG REMARK 470 THR A 205 OG1 CG2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 LYS B 168 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH K 285 O HOH K 300 2.13 REMARK 500 O HOH K 222 O HOH K 233 2.16 REMARK 500 O HOH B 441 O HOH B 511 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 314 O HOH K 276 2454 2.10 REMARK 500 O HOH A 477 O HOH A 488 2555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 30 -120.83 50.38 REMARK 500 ALA B 51 -40.63 72.25 REMARK 500 TRP B 94 -147.88 54.48 REMARK 500 UNK K 26 17.55 81.41 REMARK 500 UNK K 55 -3.78 85.46 REMARK 500 UNK K 57 170.81 91.76 REMARK 500 UNK K 106 61.50 69.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 556 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 557 DISTANCE = 6.17 ANGSTROMS DBREF 6ULF A 1 230 PDB 6ULF 6ULF 1 230 DBREF 6ULF B 1 213 PDB 6ULF 6ULF 1 213 DBREF 6ULF K 1 121 PDB 6ULF 6ULF 1 121 DBREF 6ULF P 1 12 UNP P02893 CSP_PLAFA 124 135 SEQRES 1 A 230 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 A 230 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 230 PHE THR PHE SER ILE TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 A 230 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA LEU ILE TRP SEQRES 5 A 230 TYR ASP GLY THR ASN LYS TYR TYR THR ASP SER VAL LYS SEQRES 6 A 230 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 A 230 LEU PHE LEU GLN MET ASN SER VAL ARG ALA GLU ASP THR SEQRES 8 A 230 ALA VAL TYR TYR CYS ALA ARG ASP ALA HIS TYR SER ASP SEQRES 9 A 230 SER SER GLY TYR SER SER TRP GLY TYR PHE ASP TYR TRP SEQRES 10 A 230 GLY GLN GLY SER LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 A 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 A 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 A 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 A 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 A 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 A 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 A 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 A 230 ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 B 213 GLU ILE VAL LEU THR GLN SER PRO ALA THR LEU SER LEU SEQRES 2 B 213 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 B 213 GLN SER VAL SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 B 213 PRO GLY GLN ALA PRO ARG LEU LEU ILE PHE ASP ALA SER SEQRES 5 B 213 ILE ARG ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 B 213 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 B 213 GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN ARG SEQRES 8 B 213 SER ASN TRP TYR THR PHE GLY GLN GLY THR LYS LEU GLU SEQRES 9 B 213 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 B 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 B 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 B 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 B 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 B 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 B 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 B 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 B 213 ASN ARG GLY GLU CYS SEQRES 1 K 121 UNK VAL GLN LEU UNK UNK SER GLY GLY GLY UNK VAL GLN SEQRES 2 K 121 UNK GLY UNK SER LEU UNK LEU SER CYS UNK ALA UNK UNK SEQRES 3 K 121 UNK UNK UNK UNK UNK UNK UNK UNK UNK TRP UNK ARG GLN SEQRES 4 K 121 UNK PRO GLY UNK UNK ARG GLU UNK VAL UNK UNK UNK UNK SEQRES 5 K 121 UNK UNK UNK UNK UNK UNK UNK UNK UNK ASP SER UNK UNK SEQRES 6 K 121 GLY ARG PHE THR UNK SER UNK ASP UNK UNK UNK UNK UNK SEQRES 7 K 121 UNK UNK LEU GLN UNK UNK UNK LEU UNK UNK UNK ASP UNK SEQRES 8 K 121 ALA UNK TYR TYR CYS UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 9 K 121 UNK UNK UNK UNK UNK UNK TRP GLY UNK GLY THR UNK VAL SEQRES 10 K 121 THR VAL SER SER SEQRES 1 P 12 ASN ALA ASN PRO ASN VAL ASP PRO ASN ALA ASN PRO FORMUL 5 HOH *635(H2 O) HELIX 1 AA1 THR A 28 TYR A 32 5 5 HELIX 2 AA2 ASP A 62 LYS A 65 5 4 HELIX 3 AA3 ASN A 74 LYS A 76 5 3 HELIX 4 AA4 ARG A 87 THR A 91 5 5 HELIX 5 AA5 SER A 141 LYS A 143 5 3 HELIX 6 AA6 SER A 170 ALA A 172 5 3 HELIX 7 AA7 SER A 201 GLY A 204 5 4 HELIX 8 AA8 LYS A 215 ASN A 218 5 4 HELIX 9 AA9 GLU B 79 PHE B 83 5 5 HELIX 10 AB1 SER B 120 SER B 126 1 7 HELIX 11 AB2 LYS B 182 GLU B 186 1 5 HELIX 12 AB3 ASP K 62 UNK K 65 5 4 HELIX 13 AB4 UNK K 74 UNK K 76 5 3 HELIX 14 AB5 UNK K 87 UNK K 91 5 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O SER A 21 N SER A 7 SHEET 3 AA1 4 THR A 78 MET A 83 -1 O MET A 83 N LEU A 18 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N SER A 71 O PHE A 80 SHEET 1 AA2 6 GLY A 10 VAL A 12 0 SHEET 2 AA2 6 SER A 121 VAL A 125 1 O THR A 124 N VAL A 12 SHEET 3 AA2 6 ALA A 92 ASP A 99 -1 N TYR A 94 O SER A 121 SHEET 4 AA2 6 MET A 34 GLN A 39 -1 N VAL A 37 O TYR A 95 SHEET 5 AA2 6 LEU A 45 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 LYS A 58 TYR A 60 -1 O TYR A 59 N LEU A 50 SHEET 1 AA3 4 GLY A 10 VAL A 12 0 SHEET 2 AA3 4 SER A 121 VAL A 125 1 O THR A 124 N VAL A 12 SHEET 3 AA3 4 ALA A 92 ASP A 99 -1 N TYR A 94 O SER A 121 SHEET 4 AA3 4 PHE A 114 TRP A 117 -1 O TYR A 116 N ARG A 98 SHEET 1 AA4 2 TYR A 102 SER A 103 0 SHEET 2 AA4 2 SER A 109 SER A 110 -1 O SER A 110 N TYR A 102 SHEET 1 AA5 4 SER A 134 LEU A 138 0 SHEET 2 AA5 4 THR A 149 TYR A 159 -1 O GLY A 153 N LEU A 138 SHEET 3 AA5 4 TYR A 190 PRO A 199 -1 O LEU A 192 N VAL A 156 SHEET 4 AA5 4 VAL A 177 THR A 179 -1 N HIS A 178 O VAL A 195 SHEET 1 AA6 4 THR A 145 SER A 146 0 SHEET 2 AA6 4 THR A 149 TYR A 159 -1 O THR A 149 N SER A 146 SHEET 3 AA6 4 TYR A 190 PRO A 199 -1 O LEU A 192 N VAL A 156 SHEET 4 AA6 4 VAL A 183 LEU A 184 -1 N VAL A 183 O SER A 191 SHEET 1 AA7 3 THR A 165 TRP A 168 0 SHEET 2 AA7 3 ILE A 209 HIS A 214 -1 O ASN A 211 N SER A 167 SHEET 3 AA7 3 THR A 219 LYS A 224 -1 O VAL A 221 N VAL A 212 SHEET 1 AA8 4 LEU B 4 SER B 7 0 SHEET 2 AA8 4 ALA B 19 ALA B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AA8 4 ASP B 70 ILE B 75 -1 O LEU B 73 N LEU B 21 SHEET 4 AA8 4 PHE B 62 SER B 67 -1 N SER B 63 O THR B 74 SHEET 1 AA9 6 THR B 10 LEU B 13 0 SHEET 2 AA9 6 THR B 101 ILE B 105 1 O LYS B 102 N LEU B 11 SHEET 3 AA9 6 ALA B 84 GLN B 90 -1 N ALA B 84 O LEU B 103 SHEET 4 AA9 6 LEU B 33 GLN B 38 -1 N TYR B 36 O TYR B 87 SHEET 5 AA9 6 ARG B 45 PHE B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 AA9 6 ILE B 53 ARG B 54 -1 O ILE B 53 N PHE B 49 SHEET 1 AB1 4 THR B 10 LEU B 13 0 SHEET 2 AB1 4 THR B 101 ILE B 105 1 O LYS B 102 N LEU B 11 SHEET 3 AB1 4 ALA B 84 GLN B 90 -1 N ALA B 84 O LEU B 103 SHEET 4 AB1 4 THR B 96 PHE B 97 -1 O THR B 96 N GLN B 90 SHEET 1 AB2 4 SER B 113 PHE B 117 0 SHEET 2 AB2 4 THR B 128 PHE B 138 -1 O LEU B 134 N PHE B 115 SHEET 3 AB2 4 TYR B 172 SER B 181 -1 O LEU B 178 N VAL B 131 SHEET 4 AB2 4 SER B 158 VAL B 162 -1 N SER B 161 O SER B 175 SHEET 1 AB3 4 ALA B 152 LEU B 153 0 SHEET 2 AB3 4 ALA B 143 VAL B 149 -1 N VAL B 149 O ALA B 152 SHEET 3 AB3 4 VAL B 190 HIS B 197 -1 O GLU B 194 N GLN B 146 SHEET 4 AB3 4 VAL B 204 ASN B 209 -1 O VAL B 204 N VAL B 195 SHEET 1 AB4 4 GLN K 3 SER K 7 0 SHEET 2 AB4 4 LEU K 18 UNK K 25 -1 O UNK K 23 N UNK K 5 SHEET 3 AB4 4 UNK K 78 UNK K 83 -1 O UNK K 83 N LEU K 18 SHEET 4 AB4 4 PHE K 68 ASP K 73 -1 N ASP K 73 O UNK K 78 SHEET 1 AB5 6 GLY K 10 VAL K 12 0 SHEET 2 AB5 6 THR K 115 VAL K 119 1 O THR K 118 N VAL K 12 SHEET 3 AB5 6 ALA K 92 UNK K 99 -1 N TYR K 94 O THR K 115 SHEET 4 AB5 6 UNK K 34 GLN K 39 -1 N UNK K 37 O TYR K 95 SHEET 5 AB5 6 GLU K 46 UNK K 51 -1 O UNK K 49 N TRP K 36 SHEET 6 AB5 6 UNK K 58 UNK K 60 -1 O UNK K 59 N UNK K 50 SHEET 1 AB6 4 GLY K 10 VAL K 12 0 SHEET 2 AB6 4 THR K 115 VAL K 119 1 O THR K 118 N VAL K 12 SHEET 3 AB6 4 ALA K 92 UNK K 99 -1 N TYR K 94 O THR K 115 SHEET 4 AB6 4 UNK K 108 TRP K 111 -1 O UNK K 110 N UNK K 98 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.06 SSBOND 2 CYS A 154 CYS A 210 1555 1555 2.02 SSBOND 3 CYS A 230 CYS B 213 1555 1555 2.04 SSBOND 4 CYS B 23 CYS B 88 1555 1555 2.05 SSBOND 5 CYS B 133 CYS B 193 1555 1555 2.05 SSBOND 6 CYS K 22 CYS K 96 1555 1555 2.03 CISPEP 1 PHE A 160 PRO A 161 0 -6.91 CISPEP 2 GLU A 162 PRO A 163 0 -1.53 CISPEP 3 SER B 7 PRO B 8 0 -5.17 CISPEP 4 TYR B 139 PRO B 140 0 2.49 CRYST1 61.536 76.084 63.247 90.00 98.32 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016251 0.000000 0.002377 0.00000 SCALE2 0.000000 0.013143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015979 0.00000