HEADER TRANSFERASE,HYDROLASE 09-OCT-19 6UM8 TITLE HIV INTEGRASE IN COMPLEX WITH COMPOUND-14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DNA INTEGRATION, AIDS, RNASEH, LEDGF, ENDONUCLEASE, HIV-1 INTEGRASE, KEYWDS 2 TRANSFERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.KHAN,K.KISH REVDAT 3 11-OCT-23 6UM8 1 REMARK REVDAT 2 25-MAR-20 6UM8 1 JRNL REVDAT 1 04-MAR-20 6UM8 0 JRNL AUTH G.LI,N.A.MEANWELL,M.R.KRYSTAL,D.R.LANGLEY,B.N.NAIDU, JRNL AUTH 2 P.SIVAPRAKASAM,H.LEWIS,K.KISH,J.A.KHAN,A.NG,G.L.TRAINOR, JRNL AUTH 3 C.CIANCI,I.B.DICKER,M.A.WALKER,Z.LIN,T.PROTACK,L.DISCOTTO, JRNL AUTH 4 S.JENKINS,S.W.GERRITZ,A.PENDRI JRNL TITL DISCOVERY AND OPTIMIZATION OF NOVEL PYRAZOLOPYRIMIDINES AS JRNL TITL 2 POTENT AND ORALLY BIOAVAILABLE ALLOSTERIC HIV-1 INTEGRASE JRNL TITL 3 INHIBITORS. JRNL REF J.MED.CHEM. V. 63 2620 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32081010 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01681 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 116.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33296 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NONE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1620 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 666 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2325 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 642 REMARK 3 BIN R VALUE (WORKING SET) : 0.2324 REMARK 3 BIN FREE R VALUE : 0.2341 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 24 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2135 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 173 REMARK 3 SOLVENT ATOMS : 135 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.280 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.155 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.143 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.150 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.140 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2457 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3370 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 846 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 466 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2457 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 312 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2887 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.01 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.17 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244845. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5? REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33296 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 164.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 38.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09200 REMARK 200 FOR THE DATA SET : 42.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 8.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 164.5 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 29.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.04300 REMARK 200 FOR SHELL : 79.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 6NCJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE AND 100 MM REMARK 280 CITRIC ACID PH 3.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 82.31300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.31300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 82.31300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.31300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 82.31300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 82.31300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 82.31300 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 82.31300 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 82.31300 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 82.31300 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 82.31300 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 82.31300 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 82.31300 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 82.31300 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 82.31300 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 82.31300 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 82.31300 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 82.31300 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 41.15650 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 123.46950 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 123.46950 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 41.15650 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 41.15650 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 41.15650 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 123.46950 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 123.46950 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 41.15650 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 123.46950 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 41.15650 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 123.46950 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 41.15650 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 123.46950 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 123.46950 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 123.46950 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 41.15650 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 123.46950 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 41.15650 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 41.15650 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 41.15650 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 123.46950 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 123.46950 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 41.15650 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 41.15650 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 123.46950 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 123.46950 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 123.46950 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 123.46950 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 41.15650 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 123.46950 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 41.15650 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 123.46950 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 41.15650 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 41.15650 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 41.15650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 47 REMARK 465 SER A 48 REMARK 465 HIS A 49 REMARK 465 MET A 50 REMARK 465 HIS A 51 REMARK 465 GLY A 52 REMARK 465 GLN A 53 REMARK 465 VAL A 54 REMARK 465 ASP A 55 REMARK 465 SER A 56 REMARK 465 ILE A 141 REMARK 465 PRO A 142 REMARK 465 TYR A 143 REMARK 465 ASN A 144 REMARK 465 PRO A 145 REMARK 465 GLN A 146 REMARK 465 SER A 147 REMARK 465 GLN A 148 REMARK 465 GLY A 149 REMARK 465 LYS A 188 REMARK 465 GLY A 189 REMARK 465 GLY A 190 REMARK 465 ILE A 191 REMARK 465 GLY A 192 REMARK 465 THR A 210 REMARK 465 LYS A 211 REMARK 465 GLU A 212 REMARK 465 GLY B 47 REMARK 465 SER B 48 REMARK 465 HIS B 49 REMARK 465 MET B 50 REMARK 465 HIS B 51 REMARK 465 GLY B 52 REMARK 465 GLN B 53 REMARK 465 VAL B 54 REMARK 465 ASP B 55 REMARK 465 ILE B 141 REMARK 465 PRO B 142 REMARK 465 TYR B 143 REMARK 465 ASN B 144 REMARK 465 PRO B 145 REMARK 465 GLN B 146 REMARK 465 SER B 147 REMARK 465 GLN B 148 REMARK 465 GLY B 149 REMARK 465 GLY B 189 REMARK 465 GLY B 190 REMARK 465 ILE B 191 REMARK 465 GLY B 192 REMARK 465 THR B 210 REMARK 465 LYS B 211 REMARK 465 GLU B 212 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 111 CD CE NZ REMARK 470 LYS A 136 CE NZ REMARK 470 VAL A 150 CG1 CG2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 ARG A 187 CZ NH1 NH2 REMARK 470 SER B 56 OG REMARK 470 LYS B 136 CE NZ REMARK 470 GLU B 152 CG CD OE1 OE2 REMARK 470 LYS B 156 CG CD CE NZ REMARK 470 LYS B 160 CE NZ REMARK 470 LYS B 186 CD CE NZ REMARK 470 LYS B 188 CG CD CE NZ REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 301 REMARK 610 1PE B 302 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QCG A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QCG B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 306 DBREF 6UM8 A 57 212 UNP Q76353 Q76353_9HIV1 57 212 DBREF 6UM8 B 57 212 UNP Q76353 Q76353_9HIV1 57 212 SEQADV 6UM8 GLY A 47 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 SER A 48 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 HIS A 49 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 MET A 50 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 HIS A 51 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 GLY A 52 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 GLN A 53 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 VAL A 54 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 ASP A 55 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 SER A 56 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 GLU A 131 UNP Q76353 TRP 131 CONFLICT SEQADV 6UM8 LYS A 185 UNP Q76353 PHE 185 CONFLICT SEQADV 6UM8 GLY B 47 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 SER B 48 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 HIS B 49 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 MET B 50 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 HIS B 51 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 GLY B 52 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 GLN B 53 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 VAL B 54 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 ASP B 55 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 SER B 56 UNP Q76353 EXPRESSION TAG SEQADV 6UM8 GLU B 131 UNP Q76353 TRP 131 CONFLICT SEQADV 6UM8 LYS B 185 UNP Q76353 PHE 185 CONFLICT SEQRES 1 A 166 GLY SER HIS MET HIS GLY GLN VAL ASP SER SER PRO GLY SEQRES 2 A 166 ILE TRP GLN LEU ASP CYS THR HIS LEU GLU GLY LYS VAL SEQRES 3 A 166 ILE LEU VAL ALA VAL HIS VAL ALA SER GLY TYR ILE GLU SEQRES 4 A 166 ALA GLU VAL ILE PRO ALA GLU THR GLY GLN GLU THR ALA SEQRES 5 A 166 TYR PHE LEU LEU LYS LEU ALA GLY ARG TRP PRO VAL LYS SEQRES 6 A 166 THR VAL HIS THR ASP ASN GLY SER ASN PHE THR SER THR SEQRES 7 A 166 THR VAL LYS ALA ALA CYS GLU TRP ALA GLY ILE LYS GLN SEQRES 8 A 166 GLU PHE GLY ILE PRO TYR ASN PRO GLN SER GLN GLY VAL SEQRES 9 A 166 ILE GLU SER MET ASN LYS GLU LEU LYS LYS ILE ILE GLY SEQRES 10 A 166 GLN VAL ARG ASP GLN ALA GLU HIS LEU LYS THR ALA VAL SEQRES 11 A 166 GLN MET ALA VAL PHE ILE HIS ASN LYS LYS ARG LYS GLY SEQRES 12 A 166 GLY ILE GLY GLY TYR SER ALA GLY GLU ARG ILE VAL ASP SEQRES 13 A 166 ILE ILE ALA THR ASP ILE GLN THR LYS GLU SEQRES 1 B 166 GLY SER HIS MET HIS GLY GLN VAL ASP SER SER PRO GLY SEQRES 2 B 166 ILE TRP GLN LEU ASP CYS THR HIS LEU GLU GLY LYS VAL SEQRES 3 B 166 ILE LEU VAL ALA VAL HIS VAL ALA SER GLY TYR ILE GLU SEQRES 4 B 166 ALA GLU VAL ILE PRO ALA GLU THR GLY GLN GLU THR ALA SEQRES 5 B 166 TYR PHE LEU LEU LYS LEU ALA GLY ARG TRP PRO VAL LYS SEQRES 6 B 166 THR VAL HIS THR ASP ASN GLY SER ASN PHE THR SER THR SEQRES 7 B 166 THR VAL LYS ALA ALA CYS GLU TRP ALA GLY ILE LYS GLN SEQRES 8 B 166 GLU PHE GLY ILE PRO TYR ASN PRO GLN SER GLN GLY VAL SEQRES 9 B 166 ILE GLU SER MET ASN LYS GLU LEU LYS LYS ILE ILE GLY SEQRES 10 B 166 GLN VAL ARG ASP GLN ALA GLU HIS LEU LYS THR ALA VAL SEQRES 11 B 166 GLN MET ALA VAL PHE ILE HIS ASN LYS LYS ARG LYS GLY SEQRES 12 B 166 GLY ILE GLY GLY TYR SER ALA GLY GLU ARG ILE VAL ASP SEQRES 13 B 166 ILE ILE ALA THR ASP ILE GLN THR LYS GLU HET 1PE A 301 10 HET 1PE A 302 16 HET PEG A 303 7 HET PEG A 304 7 HET QCG A 305 67 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 A 308 5 HET 1PE B 301 16 HET 1PE B 302 13 HET QCG B 303 67 HET SO4 B 304 5 HET SO4 B 305 5 HET SO4 B 306 5 HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM QCG (2S)-TERT-BUTOXY[7-(8-FLUORO-5-METHYL-3,4-DIHYDRO-2H-1- HETNAM 2 QCG BENZOPYRAN-6-YL)-5-METHYL-2-PHENYLPYRAZOLO[1,5- HETNAM 3 QCG A]PYRIMIDIN-6-YL]ACETIC ACID HETNAM SO4 SULFATE ION HETSYN 1PE PEG400 FORMUL 3 1PE 4(C10 H22 O6) FORMUL 5 PEG 2(C4 H10 O3) FORMUL 7 QCG 2(C29 H30 F N3 O4) FORMUL 8 SO4 6(O4 S 2-) FORMUL 17 HOH *135(H2 O) HELIX 1 AA1 THR A 93 TRP A 108 1 16 HELIX 2 AA2 GLY A 118 SER A 123 1 6 HELIX 3 AA3 SER A 123 GLY A 134 1 12 HELIX 4 AA4 ILE A 151 ARG A 166 1 16 HELIX 5 AA5 ASP A 167 ALA A 169 5 3 HELIX 6 AA6 HIS A 171 LYS A 186 1 16 HELIX 7 AA7 SER A 195 GLN A 209 1 15 HELIX 8 AA8 THR B 93 TRP B 108 1 16 HELIX 9 AA9 GLY B 118 SER B 123 1 6 HELIX 10 AB1 SER B 123 GLY B 134 1 12 HELIX 11 AB2 VAL B 150 GLU B 152 5 3 HELIX 12 AB3 SER B 153 ARG B 166 1 14 HELIX 13 AB4 ASP B 167 ALA B 169 5 3 HELIX 14 AB5 HIS B 171 LYS B 186 1 16 HELIX 15 AB6 SER B 195 GLN B 209 1 15 SHEET 1 AA1 5 ILE A 84 ILE A 89 0 SHEET 2 AA1 5 LYS A 71 HIS A 78 -1 N ALA A 76 O GLU A 85 SHEET 3 AA1 5 ILE A 60 LEU A 68 -1 N ASP A 64 O VAL A 75 SHEET 4 AA1 5 THR A 112 THR A 115 1 O HIS A 114 N TRP A 61 SHEET 5 AA1 5 LYS A 136 PHE A 139 1 O LYS A 136 N VAL A 113 SHEET 1 AA2 5 ILE B 84 ILE B 89 0 SHEET 2 AA2 5 LYS B 71 HIS B 78 -1 N ALA B 76 O GLU B 85 SHEET 3 AA2 5 ILE B 60 LEU B 68 -1 N THR B 66 O ILE B 73 SHEET 4 AA2 5 THR B 112 THR B 115 1 O HIS B 114 N TRP B 61 SHEET 5 AA2 5 LYS B 136 PHE B 139 1 O LYS B 136 N VAL B 113 SITE 1 AC1 5 LYS A 127 ASP A 167 GLN A 168 GLU A 170 SITE 2 AC1 5 QCG A 305 SITE 1 AC2 9 GLU A 87 LYS A 103 HIS A 171 LYS A 173 SITE 2 AC2 9 QCG A 305 GLU B 87 GLU B 96 TYR B 99 SITE 3 AC2 9 1PE B 302 SITE 1 AC3 3 TRP A 132 PEG A 304 TRP B 132 SITE 1 AC4 3 ILE A 182 LYS A 185 PEG A 303 SITE 1 AC5 19 THR A 124 LYS A 127 ALA A 128 GLU A 131 SITE 2 AC5 19 GLN A 168 GLU A 170 HIS A 171 THR A 174 SITE 3 AC5 19 1PE A 301 1PE A 302 HOH A 404 HOH A 435 SITE 4 AC5 19 GLN B 95 ALA B 98 THR B 124 THR B 125 SITE 5 AC5 19 ALA B 128 ALA B 129 TRP B 132 SITE 1 AC6 5 LYS A 71 GLU A 170 HIS A 171 LEU A 172 SITE 2 AC6 5 HOH A 408 SITE 1 AC7 3 THR A 66 HIS A 67 LYS A 159 SITE 1 AC8 4 THR A 93 GLY A 94 GLN A 95 SER A 123 SITE 1 AC9 8 LYS B 71 LYS B 127 ASP B 167 GLN B 168 SITE 2 AC9 8 GLU B 170 QCG B 303 SO4 B 306 HOH B 449 SITE 1 AD1 8 GLN A 95 GLU A 96 TYR A 99 1PE A 302 SITE 2 AD1 8 GLU B 87 VAL B 88 LYS B 173 QCG B 303 SITE 1 AD2 18 ALA A 98 THR A 124 THR A 125 ALA A 128 SITE 2 AD2 18 ALA A 129 TRP A 132 THR B 124 LYS B 127 SITE 3 AD2 18 GLU B 131 GLN B 168 ALA B 169 GLU B 170 SITE 4 AD2 18 HIS B 171 THR B 174 1PE B 301 1PE B 302 SITE 5 AD2 18 HOH B 402 HOH B 450 SITE 1 AD3 8 THR B 93 GLY B 94 GLN B 95 SER B 123 SITE 2 AD3 8 THR B 125 HOH B 418 HOH B 438 HOH B 446 SITE 1 AD4 4 ASP B 116 ASN B 117 GLY B 140 HOH B 412 SITE 1 AD5 7 LYS B 71 GLU B 170 HIS B 171 LEU B 172 SITE 2 AD5 7 1PE B 301 HOH B 401 HOH B 409 CRYST1 164.626 164.626 164.626 90.00 90.00 90.00 P 43 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006074 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006074 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006074 0.00000