HEADER TRANSFERASE 10-OCT-19 6UMP TITLE CRYSTAL STRUCTURE OF MAVC IN COMPLEX WITH SUBSTRATE MIMIC IN P65 SPACE TITLE 2 GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN; COMPND 3 CHAIN: E; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MAVC; COMPND 8 CHAIN: A; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: UBIQUITIN-CONJUGATING ENZYME E2 N; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: BENDLESS-LIKE UBIQUITIN-CONJUGATING ENZYME,E2 UBIQUITIN- COMPND 15 CONJUGATING ENZYME N,UBC13,UBCH13,UBIQUITIN CARRIER PROTEIN N, COMPND 16 UBIQUITIN-PROTEIN LIGASE N; COMPND 17 EC: 2.3.2.23; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 10 ORGANISM_TAXID: 446; SOURCE 11 GENE: C3927_10720; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 GENE: UBE2N, BLU; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LEGIONELLA, EFFECTOR, TRANSGLUTAMINASE, UBIQUITINATION, COMPLEX, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.PUVAR,S.IYER,Z.Q.LUO,C.DAS REVDAT 2 11-OCT-23 6UMP 1 REMARK REVDAT 1 27-MAY-20 6UMP 0 JRNL AUTH K.PUVAR,S.IYER,J.FU,S.KENNY,K.I.NEGRON TERON,Z.Q.LUO, JRNL AUTH 2 P.S.BRZOVIC,R.E.KLEVIT,C.DAS JRNL TITL LEGIONELLA EFFECTOR MAVC TARGETS THE UBE2N~UB CONJUGATE FOR JRNL TITL 2 NONCANONICAL UBIQUITINATION. JRNL REF NAT COMMUN V. 11 2365 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32398758 JRNL DOI 10.1038/S41467-020-16211-X REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 17235 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.7460 - 6.3928 1.00 1352 151 0.1881 0.2431 REMARK 3 2 6.3928 - 5.0816 1.00 1323 150 0.2362 0.2613 REMARK 3 3 5.0816 - 4.4414 1.00 1282 146 0.2106 0.2561 REMARK 3 4 4.4414 - 4.0363 1.00 1304 147 0.2181 0.2857 REMARK 3 5 4.0363 - 3.7475 1.00 1286 149 0.2476 0.3077 REMARK 3 6 3.7475 - 3.5269 1.00 1278 141 0.2753 0.3670 REMARK 3 7 3.5269 - 3.3505 1.00 1277 144 0.2974 0.3612 REMARK 3 8 3.3505 - 3.2048 1.00 1300 142 0.3195 0.3993 REMARK 3 9 3.2048 - 3.0816 1.00 1278 140 0.3129 0.4047 REMARK 3 10 3.0816 - 2.9753 1.00 1272 140 0.3154 0.3912 REMARK 3 11 2.9753 - 2.8824 1.00 1294 145 0.3210 0.3788 REMARK 3 12 2.8824 - 2.8000 1.00 1251 143 0.3524 0.3815 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4703 REMARK 3 ANGLE : 0.582 6390 REMARK 3 CHIRALITY : 0.041 725 REMARK 3 PLANARITY : 0.004 833 REMARK 3 DIHEDRAL : 2.814 2845 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17247 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.20100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5TSC, 1UBQ, 2C2V REMARK 200 REMARK 200 REMARK: NEEDLE/RODLIKE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM FORMATE, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.57133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.78567 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.67850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 8.89283 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.46417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 LEU A 6 REMARK 465 GLU A 7 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN E 2 CG CD OE1 NE2 REMARK 470 LYS E 6 CG CD CE NZ REMARK 470 LYS E 11 CG CD CE NZ REMARK 470 SER E 20 CB OG REMARK 470 GLU E 24 CG CD OE1 OE2 REMARK 470 LYS E 29 CG CD CE NZ REMARK 470 LYS E 48 CG CD CE NZ REMARK 470 GLU E 51 CB CG CD OE1 OE2 REMARK 470 ARG E 54 CG CD NE CZ NH1 NH2 REMARK 470 LEU E 56 CG CD1 CD2 REMARK 470 ASN E 60 CG OD1 ND2 REMARK 470 GLN E 62 CG CD OE1 NE2 REMARK 470 LYS E 63 CG CD CE NZ REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 LEU A 11 CG CD1 CD2 REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 LYS A 110 CG CD CE NZ REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 GLU A 144 CG CD OE1 OE2 REMARK 470 THR A 145 OG1 CG2 REMARK 470 GLU A 197 CG CD OE1 OE2 REMARK 470 GLU A 202 CG CD OE1 OE2 REMARK 470 GLU A 203 CG CD OE1 OE2 REMARK 470 GLU A 239 CG CD OE1 OE2 REMARK 470 ASP A 241 CG OD1 OD2 REMARK 470 SER A 242 OG REMARK 470 GLU A 243 CB CG CD OE1 OE2 REMARK 470 THR A 245 OG1 CG2 REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 ARG A 274 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 275 CG CD1 CD2 REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 470 LYS A 283 CG CD CE NZ REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 ILE A 295 CG1 CG2 CD1 REMARK 470 VAL A 312 CG1 CG2 REMARK 470 GLU A 319 CG CD OE1 OE2 REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 GLU A 332 CG CD OE1 OE2 REMARK 470 GLU A 336 CG CD OE1 OE2 REMARK 470 ILE A 337 CG1 CG2 CD1 REMARK 470 GLN A 340 CG CD OE1 NE2 REMARK 470 GLU A 343 CG CD OE1 OE2 REMARK 470 GLU A 347 CG CD OE1 OE2 REMARK 470 GLU A 356 CG CD OE1 OE2 REMARK 470 LYS A 359 CG CD CE NZ REMARK 470 GLU A 363 CG CD OE1 OE2 REMARK 470 LEU A 364 CG CD1 CD2 REMARK 470 GLU A 384 CG CD OE1 OE2 REMARK 470 ASP C 89 CG OD1 OD2 REMARK 470 LYS C 92 CG CD CE NZ REMARK 470 ASP C 93 CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 95 CD OE1 OE2 REMARK 480 LYS A 309 CD CE NZ REMARK 480 MET A 317 SD CE REMARK 480 ASN A 318 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA E 46 78.23 55.99 REMARK 500 ASP E 58 -6.33 -141.46 REMARK 500 ASN E 60 19.94 54.92 REMARK 500 GLU E 64 75.82 52.62 REMARK 500 GLU A 66 44.14 -108.02 REMARK 500 ASN A 115 41.87 -78.01 REMARK 500 ASN A 128 60.62 -100.32 REMARK 500 THR A 145 -29.08 -161.53 REMARK 500 ASP A 162 -156.24 -78.74 REMARK 500 TYR A 195 62.86 -117.82 REMARK 500 ASP A 241 37.37 -74.89 REMARK 500 SER A 242 -134.27 54.05 REMARK 500 GLU A 243 -123.05 59.58 REMARK 500 SER A 257 -72.21 -144.60 REMARK 500 ARG A 274 1.18 -62.30 REMARK 500 LYS A 309 49.09 -94.63 REMARK 500 LYS C 92 -97.88 -96.89 REMARK 500 ALA C 122 19.94 59.29 REMARK 500 ASN C 123 92.67 -166.11 REMARK 500 REMARK 500 REMARK: NULL DBREF 6UMP E 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF1 6UMP A 1 384 UNP A0A2S6F4I5_LEGPN DBREF2 6UMP A A0A2S6F4I5 1 384 DBREF 6UMP C 1 152 UNP P61088 UBE2N_HUMAN 1 152 SEQADV 6UMP CYS E 76 UNP P0CG48 GLY 76 ENGINEERED MUTATION SEQADV 6UMP GLY A -4 UNP A0A2S6F4I EXPRESSION TAG SEQADV 6UMP PRO A -3 UNP A0A2S6F4I EXPRESSION TAG SEQADV 6UMP LEU A -2 UNP A0A2S6F4I EXPRESSION TAG SEQADV 6UMP GLY A -1 UNP A0A2S6F4I EXPRESSION TAG SEQADV 6UMP SER A 0 UNP A0A2S6F4I EXPRESSION TAG SEQADV 6UMP ALA A 74 UNP A0A2S6F4I CYS 74 ENGINEERED MUTATION SEQRES 1 E 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 E 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 E 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 E 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 E 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 E 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY CYS SEQRES 1 A 389 GLY PRO LEU GLY SER MET THR THR SER LYS LEU GLU LYS SEQRES 2 A 389 THR GLY LEU HIS VAL HIS GLU LYS ILE LYS HIS MET VAL SEQRES 3 A 389 LYS ASN TYR GLY THR MET ILE THR GLY ILE PRO ALA GLU SEQRES 4 A 389 ILE LEU GLY GLN ASN GLU ALA GLU ILE SER VAL GLY TYR SEQRES 5 A 389 VAL LYS LYS MET GLY ASN MET LYS GLU ASN ILE ALA GLU SEQRES 6 A 389 VAL VAL ARG LYS SER GLU MET THR GLN PRO THR ASN SER SEQRES 7 A 389 ALA GLY LYS ALA SER ASN GLU VAL CYS ASP LEU LEU LEU SEQRES 8 A 389 GLY THR GLU GLY ALA SER GLU PHE GLU LYS SER SER TYR SEQRES 9 A 389 GLN VAL LEU SER GLY ASP GLY SER ASN LEU LYS GLY SER SEQRES 10 A 389 LEU PRO ASN LYS ASN LEU LEU VAL ARG VAL GLU MET ASP SEQRES 11 A 389 ARG PHE ASN ALA PRO GLN LYS TYR GLN LYS ILE LYS ARG SEQRES 12 A 389 GLU GLU PHE ASN PRO GLU THR ALA GLU LYS ASN LYS ILE SEQRES 13 A 389 TYR LEU LEU GLU ASP GLN LEU VAL TYR LEU ASP ILE PHE SEQRES 14 A 389 GLY LYS VAL ILE ASP LEU GLY GLN THR SER ASP THR CYS SEQRES 15 A 389 HIS ARG LEU PHE ASN ALA ILE THR THR PRO PHE TYR GLN SEQRES 16 A 389 ASN TYR ILE LEU TYR ASP GLU TYR ILE ASP PRO GLU GLU SEQRES 17 A 389 SER ALA GLU GLU ALA ALA MET PHE GLU MET GLY GLU ILE SEQRES 18 A 389 VAL LYS ALA LYS MET LYS ASN ILE ASP CYS TRP THR ALA SEQRES 19 A 389 THR HIS SER PHE THR ILE PHE VAL PRO GLU SER ASP SER SEQRES 20 A 389 GLU ASP THR ARG THR LEU TYR PRO TYR GLN ALA TYR TRP SEQRES 21 A 389 THR SER HIS THR LEU GLN GLN TRP PHE SER GLY ASP LYS SEQRES 22 A 389 ASP GLU LYS LEU SER ARG LEU GLY ILE ASP GLY TYR ILE SEQRES 23 A 389 GLU LYS LEU ALA LEU LEU GLY THR THR THR ASP SER LYS SEQRES 24 A 389 ILE ARG SER SER ILE TYR GLY GLU LEU PHE SER PRO PRO SEQRES 25 A 389 GLY LYS GLU HIS VAL PHE CYS THR GLY MET ASN GLU LYS SEQRES 26 A 389 PHE SER PRO LEU ARG VAL LYS PHE LYS VAL THR GLU VAL SEQRES 27 A 389 ASN PRO GLU ILE ALA LEU GLN ASN LEU GLU GLU VAL GLN SEQRES 28 A 389 GLU PHE ILE ASP THR ASN TYR PRO GLY GLU ASN ALA LYS SEQRES 29 A 389 ASP GLN CYS GLU LEU TYR LYS ILE LYS ALA GLN GLU ALA SEQRES 30 A 389 MET THR LYS GLN LEU GLU MET ARG LEU LEU ILE GLU SEQRES 1 C 152 MET ALA GLY LEU PRO ARG ARG ILE ILE LYS GLU THR GLN SEQRES 2 C 152 ARG LEU LEU ALA GLU PRO VAL PRO GLY ILE LYS ALA GLU SEQRES 3 C 152 PRO ASP GLU SER ASN ALA ARG TYR PHE HIS VAL VAL ILE SEQRES 4 C 152 ALA GLY PRO GLN ASP SER PRO PHE GLU GLY GLY THR PHE SEQRES 5 C 152 LYS LEU GLU LEU PHE LEU PRO GLU GLU TYR PRO MET ALA SEQRES 6 C 152 ALA PRO LYS VAL ARG PHE MET THR LYS ILE TYR HIS PRO SEQRES 7 C 152 ASN VAL ASP LYS LEU GLY ARG ILE CYS LEU ASP ILE LEU SEQRES 8 C 152 LYS ASP LYS TRP SER PRO ALA LEU GLN ILE ARG THR VAL SEQRES 9 C 152 LEU LEU SER ILE GLN ALA LEU LEU SER ALA PRO ASN PRO SEQRES 10 C 152 ASP ASP PRO LEU ALA ASN ASP VAL ALA GLU GLN TRP LYS SEQRES 11 C 152 THR ASN GLU ALA GLN ALA ILE GLU THR ALA ARG ALA TRP SEQRES 12 C 152 THR ARG LEU TYR ALA MET ASN ASN ILE HELIX 1 AA1 THR E 22 GLY E 35 1 14 HELIX 2 AA2 PRO E 37 GLN E 41 5 5 HELIX 3 AA3 THR E 55 TYR E 59 5 5 HELIX 4 AA4 THR A 9 GLY A 25 1 17 HELIX 5 AA5 THR A 26 GLY A 30 5 5 HELIX 6 AA6 PRO A 32 VAL A 45 1 14 HELIX 7 AA7 GLY A 46 VAL A 48 5 3 HELIX 8 AA8 ASN A 53 LYS A 64 1 12 HELIX 9 AA9 SER A 73 GLY A 87 1 15 HELIX 10 AB1 GLY A 87 SER A 97 1 11 HELIX 11 AB2 GLY A 106 GLY A 111 1 6 HELIX 12 AB3 LYS A 137 PHE A 141 5 5 HELIX 13 AB4 THR A 173 ILE A 184 1 12 HELIX 14 AB5 THR A 186 GLN A 190 5 5 HELIX 15 AB6 SER A 204 MET A 221 1 18 HELIX 16 AB7 LYS A 222 ILE A 224 5 3 HELIX 17 AB8 THR A 259 GLY A 266 1 8 HELIX 18 AB9 ASP A 267 LEU A 272 1 6 HELIX 19 AC1 GLY A 276 THR A 290 1 15 HELIX 20 AC2 ARG A 296 SER A 305 1 10 HELIX 21 AC3 ASN A 334 TYR A 353 1 20 HELIX 22 AC4 ASN A 357 LEU A 381 1 25 HELIX 23 AC5 PRO C 5 GLU C 18 1 14 HELIX 24 AC6 GLN C 100 ALA C 114 1 15 HELIX 25 AC7 ASN C 123 ASN C 132 1 10 HELIX 26 AC8 ASN C 132 ALA C 148 1 17 SHEET 1 AA1 4 THR E 12 GLU E 16 0 SHEET 2 AA1 4 GLN E 2 LYS E 6 -1 N VAL E 5 O ILE E 13 SHEET 3 AA1 4 THR E 66 VAL E 70 1 O LEU E 67 N PHE E 4 SHEET 4 AA1 4 ARG E 42 ILE E 44 -1 N ILE E 44 O HIS E 68 SHEET 1 AA2 5 GLN A 100 VAL A 101 0 SHEET 2 AA2 5 LEU A 324 GLU A 332 -1 O PHE A 328 N GLN A 100 SHEET 3 AA2 5 LEU A 118 PHE A 127 -1 N ASP A 125 O ARG A 325 SHEET 4 AA2 5 TRP A 227 VAL A 237 -1 O THR A 228 N ARG A 126 SHEET 5 AA2 5 TYR A 249 TYR A 251 -1 O TYR A 251 N THR A 234 SHEET 1 AA3 4 TYR A 133 LYS A 135 0 SHEET 2 AA3 4 LYS A 150 LEU A 153 1 O LEU A 153 N GLN A 134 SHEET 3 AA3 4 LEU A 158 LEU A 161 -1 O VAL A 159 N TYR A 152 SHEET 4 AA3 4 VAL A 167 ASP A 169 -1 O ILE A 168 N TYR A 160 SHEET 1 AA4 3 ILE C 23 PRO C 27 0 SHEET 2 AA4 3 TYR C 34 ALA C 40 -1 O HIS C 36 N GLU C 26 SHEET 3 AA4 3 THR C 51 PHE C 57 -1 O LEU C 54 N VAL C 37 SSBOND 1 CYS E 76 CYS C 87 1555 1555 2.03 CISPEP 1 TYR C 62 PRO C 63 0 5.09 CRYST1 150.478 150.478 53.357 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006645 0.003837 0.000000 0.00000 SCALE2 0.000000 0.007674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018742 0.00000