data_6UPS # _entry.id 6UPS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.341 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6UPS WWPDB D_1000245004 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6UPS _pdbx_database_status.recvd_initial_deposition_date 2019-10-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ronau, J.A.' 1 0000-0002-1682-8932 'Lim, C.S.' 2 0000-0002-8550-9265 'Xiong, Y.' 3 0000-0001-9625-9313 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first 2343 _citation.page_last 2343 _citation.title 'A deubiquitylase with an unusually high-affinity ubiquitin-binding domain from the scrub typhus pathogen Orientia tsutsugamushi.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-020-15985-4 _citation.pdbx_database_id_PubMed 32393759 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Berk, J.M.' 1 ? primary 'Lim, C.' 2 ? primary 'Ronau, J.A.' 3 ? primary 'Chaudhuri, A.' 4 ? primary 'Chen, H.' 5 ? primary 'Beckmann, J.F.' 6 ? primary 'Loria, J.P.' 7 ? primary 'Xiong, Y.' 8 0000-0001-9625-9313 primary 'Hochstrasser, M.' 9 0000-0002-1131-5484 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6UPS _cell.details ? _cell.formula_units_Z ? _cell.length_a 114.787 _cell.length_a_esd ? _cell.length_b 43.093 _cell.length_b_esd ? _cell.length_c 58.244 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UPS _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ULP_PROTEASE domain-containing protein' 29597.367 1 3.4.22.- ? 'deubiquitylase domain' ? 2 water nat water 18.015 80 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)ANDQDLSNPEYLYTEDDINQLLKHYLGLDDRISIIQHVALNESLLLKQTLHQVLSDIFSG(MSE)QEKAVIPLH TGNNHWVA(MSE)AIKKG(MSE)NDDIVISYNDP(MSE)GVSIDDKVTLINCIKELCPGAKINDLQTVQQTNVYDCGPFV VDNLIK(MSE)SQGQPILSTEEAKQQAQNIRQSQVNFLSENR(MSE)ITSAAAALADTLLKNNNRITEGVLVDRIFDNKI LSVQEKQQLLNNLLDNHIKENKSLTKESLTR(MSE)LASTHFVQQQANVLLN ; _entity_poly.pdbx_seq_one_letter_code_can ;GMANDQDLSNPEYLYTEDDINQLLKHYLGLDDRISIIQHVALNESLLLKQTLHQVLSDIFSGMQEKAVIPLHTGNNHWVA MAIKKGMNDDIVISYNDPMGVSIDDKVTLINCIKELCPGAKINDLQTVQQTNVYDCGPFVVDNLIKMSQGQPILSTEEAK QQAQNIRQSQVNFLSENRMITSAAAALADTLLKNNNRITEGVLVDRIFDNKILSVQEKQQLLNNLLDNHIKENKSLTKES LTRMLASTHFVQQQANVLLN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ALA n 1 4 ASN n 1 5 ASP n 1 6 GLN n 1 7 ASP n 1 8 LEU n 1 9 SER n 1 10 ASN n 1 11 PRO n 1 12 GLU n 1 13 TYR n 1 14 LEU n 1 15 TYR n 1 16 THR n 1 17 GLU n 1 18 ASP n 1 19 ASP n 1 20 ILE n 1 21 ASN n 1 22 GLN n 1 23 LEU n 1 24 LEU n 1 25 LYS n 1 26 HIS n 1 27 TYR n 1 28 LEU n 1 29 GLY n 1 30 LEU n 1 31 ASP n 1 32 ASP n 1 33 ARG n 1 34 ILE n 1 35 SER n 1 36 ILE n 1 37 ILE n 1 38 GLN n 1 39 HIS n 1 40 VAL n 1 41 ALA n 1 42 LEU n 1 43 ASN n 1 44 GLU n 1 45 SER n 1 46 LEU n 1 47 LEU n 1 48 LEU n 1 49 LYS n 1 50 GLN n 1 51 THR n 1 52 LEU n 1 53 HIS n 1 54 GLN n 1 55 VAL n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 ILE n 1 60 PHE n 1 61 SER n 1 62 GLY n 1 63 MSE n 1 64 GLN n 1 65 GLU n 1 66 LYS n 1 67 ALA n 1 68 VAL n 1 69 ILE n 1 70 PRO n 1 71 LEU n 1 72 HIS n 1 73 THR n 1 74 GLY n 1 75 ASN n 1 76 ASN n 1 77 HIS n 1 78 TRP n 1 79 VAL n 1 80 ALA n 1 81 MSE n 1 82 ALA n 1 83 ILE n 1 84 LYS n 1 85 LYS n 1 86 GLY n 1 87 MSE n 1 88 ASN n 1 89 ASP n 1 90 ASP n 1 91 ILE n 1 92 VAL n 1 93 ILE n 1 94 SER n 1 95 TYR n 1 96 ASN n 1 97 ASP n 1 98 PRO n 1 99 MSE n 1 100 GLY n 1 101 VAL n 1 102 SER n 1 103 ILE n 1 104 ASP n 1 105 ASP n 1 106 LYS n 1 107 VAL n 1 108 THR n 1 109 LEU n 1 110 ILE n 1 111 ASN n 1 112 CYS n 1 113 ILE n 1 114 LYS n 1 115 GLU n 1 116 LEU n 1 117 CYS n 1 118 PRO n 1 119 GLY n 1 120 ALA n 1 121 LYS n 1 122 ILE n 1 123 ASN n 1 124 ASP n 1 125 LEU n 1 126 GLN n 1 127 THR n 1 128 VAL n 1 129 GLN n 1 130 GLN n 1 131 THR n 1 132 ASN n 1 133 VAL n 1 134 TYR n 1 135 ASP n 1 136 CYS n 1 137 GLY n 1 138 PRO n 1 139 PHE n 1 140 VAL n 1 141 VAL n 1 142 ASP n 1 143 ASN n 1 144 LEU n 1 145 ILE n 1 146 LYS n 1 147 MSE n 1 148 SER n 1 149 GLN n 1 150 GLY n 1 151 GLN n 1 152 PRO n 1 153 ILE n 1 154 LEU n 1 155 SER n 1 156 THR n 1 157 GLU n 1 158 GLU n 1 159 ALA n 1 160 LYS n 1 161 GLN n 1 162 GLN n 1 163 ALA n 1 164 GLN n 1 165 ASN n 1 166 ILE n 1 167 ARG n 1 168 GLN n 1 169 SER n 1 170 GLN n 1 171 VAL n 1 172 ASN n 1 173 PHE n 1 174 LEU n 1 175 SER n 1 176 GLU n 1 177 ASN n 1 178 ARG n 1 179 MSE n 1 180 ILE n 1 181 THR n 1 182 SER n 1 183 ALA n 1 184 ALA n 1 185 ALA n 1 186 ALA n 1 187 LEU n 1 188 ALA n 1 189 ASP n 1 190 THR n 1 191 LEU n 1 192 LEU n 1 193 LYS n 1 194 ASN n 1 195 ASN n 1 196 ASN n 1 197 ARG n 1 198 ILE n 1 199 THR n 1 200 GLU n 1 201 GLY n 1 202 VAL n 1 203 LEU n 1 204 VAL n 1 205 ASP n 1 206 ARG n 1 207 ILE n 1 208 PHE n 1 209 ASP n 1 210 ASN n 1 211 LYS n 1 212 ILE n 1 213 LEU n 1 214 SER n 1 215 VAL n 1 216 GLN n 1 217 GLU n 1 218 LYS n 1 219 GLN n 1 220 GLN n 1 221 LEU n 1 222 LEU n 1 223 ASN n 1 224 ASN n 1 225 LEU n 1 226 LEU n 1 227 ASP n 1 228 ASN n 1 229 HIS n 1 230 ILE n 1 231 LYS n 1 232 GLU n 1 233 ASN n 1 234 LYS n 1 235 SER n 1 236 LEU n 1 237 THR n 1 238 LYS n 1 239 GLU n 1 240 SER n 1 241 LEU n 1 242 THR n 1 243 ARG n 1 244 MSE n 1 245 LEU n 1 246 ALA n 1 247 SER n 1 248 THR n 1 249 HIS n 1 250 PHE n 1 251 VAL n 1 252 GLN n 1 253 GLN n 1 254 GLN n 1 255 ALA n 1 256 ASN n 1 257 VAL n 1 258 LEU n 1 259 LEU n 1 260 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 260 _entity_src_gen.gene_src_common_name 'Rickettsia tsutsugamushi' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene OTT_1962 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Ikeda _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Orientia tsutsugamushi (strain Ikeda)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 334380 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B3CVM3_ORITI _struct_ref.pdbx_db_accession B3CVM3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MANDQDLSNPEYLYTEDDINQLLKHYLGLDDRISIIQHVALNESLLLKQTLHQVLSDIFSGMQEKAVIPLHTGNNHWVAM AIKKGMNDDIVISYNDPMGVSIDDKVTLINCIKELCPGAKINDLQTVQQTNVYDCGPFVVDNLIKMSQGQPILSTEEAKQ QAQNIRQSQVNFLSENRMITSAAAALADTLLKNNNRITEGVLVDRIFDNKILSVQEKQQLLNNLLDNHIKENKSLTKESL TRMLASTHFVQQQANVLLN ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6UPS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 260 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B3CVM3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 259 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 259 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6UPS _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code B3CVM3 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6UPS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M ammonium iodide, 20% (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-06-10 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6UPS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18794 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 91 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.3 _reflns.pdbx_Rmerge_I_obs 0.144 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1895 _reflns_shell.percent_possible_all 93.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.825 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 3.1800 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.7800 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -2.4000 _refine.B_iso_max 105.930 _refine.B_iso_mean 38.3390 _refine.B_iso_min 17.350 _refine.correlation_coeff_Fo_to_Fc 0.9500 _refine.correlation_coeff_Fo_to_Fc_free 0.9350 _refine.details 'U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6UPS _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 34.6700 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17880 _refine.ls_number_reflns_R_free 919 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.9100 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2092 _refine.ls_R_factor_R_free 0.2371 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2077 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1950 _refine.pdbx_overall_ESU_R_Free 0.1650 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 11.7820 _refine.overall_SU_ML 0.1450 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 34.6700 _refine_hist.number_atoms_solvent 80 _refine_hist.number_atoms_total 2006 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 245 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent 42.92 _refine_hist.pdbx_number_atoms_protein 1926 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.013 1948 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 1833 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.468 1.633 2639 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.551 1.572 4279 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.221 5.000 243 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 40.658 25.859 99 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.276 15.000 348 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.635 15.000 6 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.092 0.200 270 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 2144 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 330 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.0000 _refine_ls_shell.d_res_low 2.0520 _refine_ls_shell.number_reflns_all 1398 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_R_work 1331 _refine_ls_shell.percent_reflns_obs 95.1700 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3000 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3060 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6UPS _struct.title 'Crystal structure of the deubiquitylase domain from the Orientia tsutsugamushi protein OTT_1962 (OtDUB)' _struct.pdbx_descriptor 'ULP_PROTEASE domain-containing protein (E.C.3.4.22.-)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6UPS _struct_keywords.text 'deubiquitylase, Orientia, CE clan, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 16 ? GLY A 29 ? THR A 15 GLY A 28 1 ? 14 HELX_P HELX_P2 AA2 GLU A 44 ? SER A 61 ? GLU A 43 SER A 60 1 ? 18 HELX_P HELX_P3 AA3 SER A 102 ? ASP A 105 ? SER A 101 ASP A 104 5 ? 4 HELX_P HELX_P4 AA4 LYS A 106 ? CYS A 117 ? LYS A 105 CYS A 116 1 ? 12 HELX_P HELX_P5 AA5 ASP A 135 ? GLN A 149 ? ASP A 134 GLN A 148 1 ? 15 HELX_P HELX_P6 AA6 SER A 155 ? LYS A 193 ? SER A 154 LYS A 192 1 ? 39 HELX_P HELX_P7 AA7 THR A 199 ? ASN A 210 ? THR A 198 ASN A 209 1 ? 12 HELX_P HELX_P8 AA8 SER A 214 ? LEU A 226 ? SER A 213 LEU A 225 1 ? 13 HELX_P HELX_P9 AA9 LYS A 238 ? SER A 247 ? LYS A 237 SER A 246 1 ? 10 HELX_P HELX_P10 AB1 THR A 248 ? LEU A 258 ? THR A 247 LEU A 257 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 62 C ? ? ? 1_555 A MSE 63 N ? ? A GLY 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 63 C ? ? ? 1_555 A GLN 64 N ? ? A MSE 62 A GLN 63 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A ALA 80 C ? ? ? 1_555 A MSE 81 N ? ? A ALA 79 A MSE 80 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A MSE 81 C ? ? ? 1_555 A ALA 82 N ? ? A MSE 80 A ALA 81 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale5 covale both ? A GLY 86 C ? ? ? 1_555 A MSE 87 N ? ? A GLY 85 A MSE 86 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A MSE 87 C ? ? ? 1_555 A ASN 88 N ? ? A MSE 86 A ASN 87 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A PRO 98 C ? ? ? 1_555 A MSE 99 N ? ? A PRO 97 A MSE 98 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale8 covale both ? A MSE 99 C ? ? ? 1_555 A GLY 100 N ? ? A MSE 98 A GLY 99 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale9 covale both ? A LYS 146 C ? ? ? 1_555 A MSE 147 N ? ? A LYS 145 A MSE 146 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale10 covale both ? A MSE 147 C ? ? ? 1_555 A SER 148 N ? ? A MSE 146 A SER 147 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale11 covale both ? A ARG 178 C ? ? ? 1_555 A MSE 179 N ? ? A ARG 177 A MSE 178 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale12 covale both ? A MSE 179 C ? ? ? 1_555 A ILE 180 N ? ? A MSE 178 A ILE 179 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale13 covale both ? A ARG 243 C ? ? ? 1_555 A MSE 244 N ? ? A ARG 242 A MSE 243 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale14 covale both ? A MSE 244 C ? ? ? 1_555 A LEU 245 N ? ? A MSE 243 A LEU 244 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 34 ? ILE A 36 ? ILE A 33 ILE A 35 AA1 2 LYS A 66 ? HIS A 72 ? LYS A 65 HIS A 71 AA1 3 TRP A 78 ? LYS A 85 ? TRP A 77 LYS A 84 AA1 4 ILE A 91 ? ASN A 96 ? ILE A 90 ASN A 95 AA1 5 LYS A 121 ? ASP A 124 ? LYS A 120 ASP A 123 AA2 1 ARG A 197 ? ILE A 198 ? ARG A 196 ILE A 197 AA2 2 LEU A 236 ? THR A 237 ? LEU A 235 THR A 236 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 35 ? N SER A 34 O LYS A 66 ? O LYS A 65 AA1 2 3 N ILE A 69 ? N ILE A 68 O MSE A 81 ? O MSE A 80 AA1 3 4 N ALA A 82 ? N ALA A 81 O SER A 94 ? O SER A 93 AA1 4 5 N ILE A 93 ? N ILE A 92 O ASN A 123 ? O ASN A 122 AA2 1 2 N ILE A 198 ? N ILE A 197 O LEU A 236 ? O LEU A 235 # _atom_sites.entry_id 6UPS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008712 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023206 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017169 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 ALA 3 2 ? ? ? A . n A 1 4 ASN 4 3 ? ? ? A . n A 1 5 ASP 5 4 ? ? ? A . n A 1 6 GLN 6 5 ? ? ? A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 SER 9 8 8 SER SER A . n A 1 10 ASN 10 9 9 ASN ASN A . n A 1 11 PRO 11 10 10 PRO PRO A . n A 1 12 GLU 12 11 11 GLU GLU A . n A 1 13 TYR 13 12 12 TYR TYR A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 TYR 15 14 14 TYR TYR A . n A 1 16 THR 16 15 15 THR THR A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 ASP 18 17 17 ASP ASP A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 ILE 20 19 19 ILE ILE A . n A 1 21 ASN 21 20 20 ASN ASN A . n A 1 22 GLN 22 21 21 GLN GLN A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 HIS 26 25 25 HIS HIS A . n A 1 27 TYR 27 26 26 TYR TYR A . n A 1 28 LEU 28 27 27 LEU LEU A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 ASP 32 31 31 ASP ASP A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 ILE 34 33 33 ILE ILE A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 ILE 36 35 35 ILE ILE A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 GLN 38 37 37 GLN GLN A . n A 1 39 HIS 39 38 38 HIS HIS A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 ALA 41 40 40 ALA ALA A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 ASN 43 42 42 ASN ASN A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 SER 45 44 44 SER SER A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 LYS 49 48 48 LYS LYS A . n A 1 50 GLN 50 49 49 GLN GLN A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 HIS 53 52 52 HIS HIS A . n A 1 54 GLN 54 53 53 GLN GLN A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 SER 57 56 56 SER SER A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 PHE 60 59 59 PHE PHE A . n A 1 61 SER 61 60 60 SER SER A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 MSE 63 62 62 MSE MSE A . n A 1 64 GLN 64 63 63 GLN GLN A . n A 1 65 GLU 65 64 64 GLU GLU A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 VAL 68 67 67 VAL VAL A . n A 1 69 ILE 69 68 68 ILE ILE A . n A 1 70 PRO 70 69 69 PRO PRO A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 GLY 74 73 73 GLY GLY A . n A 1 75 ASN 75 74 74 ASN ASN A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 HIS 77 76 76 HIS HIS A . n A 1 78 TRP 78 77 77 TRP TRP A . n A 1 79 VAL 79 78 78 VAL VAL A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 MSE 81 80 80 MSE MSE A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 LYS 84 83 83 LYS LYS A . n A 1 85 LYS 85 84 84 LYS LYS A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 MSE 87 86 86 MSE MSE A . n A 1 88 ASN 88 87 87 ASN ASN A . n A 1 89 ASP 89 88 88 ASP ASP A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 VAL 92 91 91 VAL VAL A . n A 1 93 ILE 93 92 92 ILE ILE A . n A 1 94 SER 94 93 93 SER SER A . n A 1 95 TYR 95 94 94 TYR TYR A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 PRO 98 97 97 PRO PRO A . n A 1 99 MSE 99 98 98 MSE MSE A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 VAL 101 100 100 VAL VAL A . n A 1 102 SER 102 101 101 SER SER A . n A 1 103 ILE 103 102 102 ILE ILE A . n A 1 104 ASP 104 103 103 ASP ASP A . n A 1 105 ASP 105 104 104 ASP ASP A . n A 1 106 LYS 106 105 105 LYS LYS A . n A 1 107 VAL 107 106 106 VAL VAL A . n A 1 108 THR 108 107 107 THR THR A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 ILE 110 109 109 ILE ILE A . n A 1 111 ASN 111 110 110 ASN ASN A . n A 1 112 CYS 112 111 111 CYS CYS A . n A 1 113 ILE 113 112 112 ILE ILE A . n A 1 114 LYS 114 113 113 LYS LYS A . n A 1 115 GLU 115 114 114 GLU GLU A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 CYS 117 116 116 CYS CYS A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 ALA 120 119 119 ALA ALA A . n A 1 121 LYS 121 120 120 LYS LYS A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 ASN 123 122 122 ASN ASN A . n A 1 124 ASP 124 123 123 ASP ASP A . n A 1 125 LEU 125 124 124 LEU LEU A . n A 1 126 GLN 126 125 125 GLN GLN A . n A 1 127 THR 127 126 126 THR THR A . n A 1 128 VAL 128 127 127 VAL VAL A . n A 1 129 GLN 129 128 128 GLN GLN A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 THR 131 130 130 THR THR A . n A 1 132 ASN 132 131 131 ASN ASN A . n A 1 133 VAL 133 132 132 VAL VAL A . n A 1 134 TYR 134 133 133 TYR TYR A . n A 1 135 ASP 135 134 134 ASP ASP A . n A 1 136 CYS 136 135 135 CYS CYS A . n A 1 137 GLY 137 136 136 GLY GLY A . n A 1 138 PRO 138 137 137 PRO PRO A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 VAL 141 140 140 VAL VAL A . n A 1 142 ASP 142 141 141 ASP ASP A . n A 1 143 ASN 143 142 142 ASN ASN A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 ILE 145 144 144 ILE ILE A . n A 1 146 LYS 146 145 145 LYS LYS A . n A 1 147 MSE 147 146 146 MSE MSE A . n A 1 148 SER 148 147 147 SER SER A . n A 1 149 GLN 149 148 148 GLN GLN A . n A 1 150 GLY 150 149 149 GLY GLY A . n A 1 151 GLN 151 150 150 GLN GLN A . n A 1 152 PRO 152 151 151 PRO PRO A . n A 1 153 ILE 153 152 152 ILE ILE A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 SER 155 154 154 SER SER A . n A 1 156 THR 156 155 155 THR THR A . n A 1 157 GLU 157 156 156 GLU GLU A . n A 1 158 GLU 158 157 157 GLU GLU A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 LYS 160 159 159 LYS LYS A . n A 1 161 GLN 161 160 160 GLN GLN A . n A 1 162 GLN 162 161 161 GLN GLN A . n A 1 163 ALA 163 162 162 ALA ALA A . n A 1 164 GLN 164 163 163 GLN GLN A . n A 1 165 ASN 165 164 164 ASN ASN A . n A 1 166 ILE 166 165 165 ILE ILE A . n A 1 167 ARG 167 166 166 ARG ARG A . n A 1 168 GLN 168 167 167 GLN GLN A . n A 1 169 SER 169 168 168 SER SER A . n A 1 170 GLN 170 169 169 GLN GLN A . n A 1 171 VAL 171 170 170 VAL VAL A . n A 1 172 ASN 172 171 171 ASN ASN A . n A 1 173 PHE 173 172 172 PHE PHE A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 SER 175 174 174 SER SER A . n A 1 176 GLU 176 175 175 GLU GLU A . n A 1 177 ASN 177 176 176 ASN ASN A . n A 1 178 ARG 178 177 177 ARG ARG A . n A 1 179 MSE 179 178 178 MSE MSE A . n A 1 180 ILE 180 179 179 ILE ILE A . n A 1 181 THR 181 180 180 THR THR A . n A 1 182 SER 182 181 181 SER SER A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 ALA 184 183 183 ALA ALA A . n A 1 185 ALA 185 184 184 ALA ALA A . n A 1 186 ALA 186 185 185 ALA ALA A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 ALA 188 187 187 ALA ALA A . n A 1 189 ASP 189 188 188 ASP ASP A . n A 1 190 THR 190 189 189 THR THR A . n A 1 191 LEU 191 190 190 LEU LEU A . n A 1 192 LEU 192 191 191 LEU LEU A . n A 1 193 LYS 193 192 192 LYS LYS A . n A 1 194 ASN 194 193 193 ASN ASN A . n A 1 195 ASN 195 194 194 ASN ASN A . n A 1 196 ASN 196 195 195 ASN ASN A . n A 1 197 ARG 197 196 196 ARG ARG A . n A 1 198 ILE 198 197 197 ILE ILE A . n A 1 199 THR 199 198 198 THR THR A . n A 1 200 GLU 200 199 199 GLU GLU A . n A 1 201 GLY 201 200 200 GLY GLY A . n A 1 202 VAL 202 201 201 VAL VAL A . n A 1 203 LEU 203 202 202 LEU LEU A . n A 1 204 VAL 204 203 203 VAL VAL A . n A 1 205 ASP 205 204 204 ASP ASP A . n A 1 206 ARG 206 205 205 ARG ARG A . n A 1 207 ILE 207 206 206 ILE ILE A . n A 1 208 PHE 208 207 207 PHE PHE A . n A 1 209 ASP 209 208 208 ASP ASP A . n A 1 210 ASN 210 209 209 ASN ASN A . n A 1 211 LYS 211 210 210 LYS LYS A . n A 1 212 ILE 212 211 211 ILE ILE A . n A 1 213 LEU 213 212 212 LEU LEU A . n A 1 214 SER 214 213 213 SER SER A . n A 1 215 VAL 215 214 214 VAL VAL A . n A 1 216 GLN 216 215 215 GLN GLN A . n A 1 217 GLU 217 216 216 GLU GLU A . n A 1 218 LYS 218 217 217 LYS LYS A . n A 1 219 GLN 219 218 218 GLN GLN A . n A 1 220 GLN 220 219 219 GLN GLN A . n A 1 221 LEU 221 220 220 LEU LEU A . n A 1 222 LEU 222 221 221 LEU LEU A . n A 1 223 ASN 223 222 222 ASN ASN A . n A 1 224 ASN 224 223 223 ASN ASN A . n A 1 225 LEU 225 224 224 LEU LEU A . n A 1 226 LEU 226 225 225 LEU LEU A . n A 1 227 ASP 227 226 ? ? ? A . n A 1 228 ASN 228 227 ? ? ? A . n A 1 229 HIS 229 228 ? ? ? A . n A 1 230 ILE 230 229 ? ? ? A . n A 1 231 LYS 231 230 ? ? ? A . n A 1 232 GLU 232 231 ? ? ? A . n A 1 233 ASN 233 232 ? ? ? A . n A 1 234 LYS 234 233 ? ? ? A . n A 1 235 SER 235 234 234 SER THR A . n A 1 236 LEU 236 235 235 LEU LEU A . n A 1 237 THR 237 236 236 THR THR A . n A 1 238 LYS 238 237 237 LYS LYS A . n A 1 239 GLU 239 238 238 GLU GLU A . n A 1 240 SER 240 239 239 SER SER A . n A 1 241 LEU 241 240 240 LEU LEU A . n A 1 242 THR 242 241 241 THR THR A . n A 1 243 ARG 243 242 242 ARG ARG A . n A 1 244 MSE 244 243 243 MSE MSE A . n A 1 245 LEU 245 244 244 LEU LEU A . n A 1 246 ALA 246 245 245 ALA ALA A . n A 1 247 SER 247 246 246 SER SER A . n A 1 248 THR 248 247 247 THR THR A . n A 1 249 HIS 249 248 248 HIS HIS A . n A 1 250 PHE 250 249 249 PHE PHE A . n A 1 251 VAL 251 250 250 VAL VAL A . n A 1 252 GLN 252 251 251 GLN GLN A . n A 1 253 GLN 253 252 252 GLN GLN A . n A 1 254 GLN 254 253 253 GLN GLN A . n A 1 255 ALA 255 254 254 ALA ALA A . n A 1 256 ASN 256 255 255 ASN ASN A . n A 1 257 VAL 257 256 256 VAL VAL A . n A 1 258 LEU 258 257 257 LEU LEU A . n A 1 259 LEU 259 258 258 LEU LEU A . n A 1 260 ASN 260 259 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 90 HOH HOH A . B 2 HOH 2 302 54 HOH HOH A . B 2 HOH 3 303 15 HOH HOH A . B 2 HOH 4 304 89 HOH HOH A . B 2 HOH 5 305 51 HOH HOH A . B 2 HOH 6 306 61 HOH HOH A . B 2 HOH 7 307 44 HOH HOH A . B 2 HOH 8 308 12 HOH HOH A . B 2 HOH 9 309 70 HOH HOH A . B 2 HOH 10 310 49 HOH HOH A . B 2 HOH 11 311 55 HOH HOH A . B 2 HOH 12 312 67 HOH HOH A . B 2 HOH 13 313 59 HOH HOH A . B 2 HOH 14 314 75 HOH HOH A . B 2 HOH 15 315 4 HOH HOH A . B 2 HOH 16 316 34 HOH HOH A . B 2 HOH 17 317 11 HOH HOH A . B 2 HOH 18 318 24 HOH HOH A . B 2 HOH 19 319 13 HOH HOH A . B 2 HOH 20 320 79 HOH HOH A . B 2 HOH 21 321 86 HOH HOH A . B 2 HOH 22 322 2 HOH HOH A . B 2 HOH 23 323 14 HOH HOH A . B 2 HOH 24 324 33 HOH HOH A . B 2 HOH 25 325 3 HOH HOH A . B 2 HOH 26 326 7 HOH HOH A . B 2 HOH 27 327 32 HOH HOH A . B 2 HOH 28 328 87 HOH HOH A . B 2 HOH 29 329 60 HOH HOH A . B 2 HOH 30 330 30 HOH HOH A . B 2 HOH 31 331 21 HOH HOH A . B 2 HOH 32 332 1 HOH HOH A . B 2 HOH 33 333 28 HOH HOH A . B 2 HOH 34 334 6 HOH HOH A . B 2 HOH 35 335 5 HOH HOH A . B 2 HOH 36 336 63 HOH HOH A . B 2 HOH 37 337 10 HOH HOH A . B 2 HOH 38 338 62 HOH HOH A . B 2 HOH 39 339 38 HOH HOH A . B 2 HOH 40 340 8 HOH HOH A . B 2 HOH 41 341 16 HOH HOH A . B 2 HOH 42 342 19 HOH HOH A . B 2 HOH 43 343 18 HOH HOH A . B 2 HOH 44 344 42 HOH HOH A . B 2 HOH 45 345 66 HOH HOH A . B 2 HOH 46 346 17 HOH HOH A . B 2 HOH 47 347 50 HOH HOH A . B 2 HOH 48 348 9 HOH HOH A . B 2 HOH 49 349 84 HOH HOH A . B 2 HOH 50 350 27 HOH HOH A . B 2 HOH 51 351 58 HOH HOH A . B 2 HOH 52 352 46 HOH HOH A . B 2 HOH 53 353 29 HOH HOH A . B 2 HOH 54 354 35 HOH HOH A . B 2 HOH 55 355 43 HOH HOH A . B 2 HOH 56 356 37 HOH HOH A . B 2 HOH 57 357 68 HOH HOH A . B 2 HOH 58 358 45 HOH HOH A . B 2 HOH 59 359 23 HOH HOH A . B 2 HOH 60 360 25 HOH HOH A . B 2 HOH 61 361 22 HOH HOH A . B 2 HOH 62 362 73 HOH HOH A . B 2 HOH 63 363 57 HOH HOH A . B 2 HOH 64 364 80 HOH HOH A . B 2 HOH 65 365 20 HOH HOH A . B 2 HOH 66 366 53 HOH HOH A . B 2 HOH 67 367 39 HOH HOH A . B 2 HOH 68 368 64 HOH HOH A . B 2 HOH 69 369 47 HOH HOH A . B 2 HOH 70 370 36 HOH HOH A . B 2 HOH 71 371 52 HOH HOH A . B 2 HOH 72 372 85 HOH HOH A . B 2 HOH 73 373 26 HOH HOH A . B 2 HOH 74 374 41 HOH HOH A . B 2 HOH 75 375 40 HOH HOH A . B 2 HOH 76 376 31 HOH HOH A . B 2 HOH 77 377 48 HOH HOH A . B 2 HOH 78 378 56 HOH HOH A . B 2 HOH 79 379 69 HOH HOH A . B 2 HOH 80 380 83 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 63 A MSE 62 ? MET 'modified residue' 2 A MSE 81 A MSE 80 ? MET 'modified residue' 3 A MSE 87 A MSE 86 ? MET 'modified residue' 4 A MSE 99 A MSE 98 ? MET 'modified residue' 5 A MSE 147 A MSE 146 ? MET 'modified residue' 6 A MSE 179 A MSE 178 ? MET 'modified residue' 7 A MSE 244 A MSE 243 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-01 2 'Structure model' 1 1 2021-04-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 2 'Structure model' '_citation_author.name' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 39.760 _pdbx_refine_tls.origin_y 2.523 _pdbx_refine_tls.origin_z 28.790 _pdbx_refine_tls.T[1][1] 0.1062 _pdbx_refine_tls.T[2][2] 0.0083 _pdbx_refine_tls.T[3][3] 0.0775 _pdbx_refine_tls.T[1][2] 0.0222 _pdbx_refine_tls.T[1][3] 0.0602 _pdbx_refine_tls.T[2][3] 0.0187 _pdbx_refine_tls.L[1][1] 0.4900 _pdbx_refine_tls.L[2][2] 0.8458 _pdbx_refine_tls.L[3][3] 1.0022 _pdbx_refine_tls.L[1][2] 0.0837 _pdbx_refine_tls.L[1][3] 0.1132 _pdbx_refine_tls.L[2][3] -0.0955 _pdbx_refine_tls.S[1][1] -0.0511 _pdbx_refine_tls.S[2][2] -0.0076 _pdbx_refine_tls.S[3][3] 0.0587 _pdbx_refine_tls.S[1][2] -0.0484 _pdbx_refine_tls.S[1][3] -0.0536 _pdbx_refine_tls.S[2][3] -0.0366 _pdbx_refine_tls.S[2][1] -0.0711 _pdbx_refine_tls.S[3][1] 0.0085 _pdbx_refine_tls.S[3][2] 0.0024 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 6 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 258 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0257 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? . 5 # _pdbx_entry_details.entry_id 6UPS _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 135 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 350 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.09 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 43 ? ? -114.41 76.24 2 1 THR A 72 ? ? -113.73 -167.14 3 1 ASN A 74 ? ? 70.32 47.97 4 1 ASN A 87 ? ? 55.82 -126.79 5 1 CYS A 116 ? ? -152.78 71.16 6 1 GLN A 125 ? ? 36.10 73.14 7 1 GLN A 128 ? ? -133.18 -51.59 8 1 LYS A 192 ? ? 53.39 -120.56 9 1 LEU A 257 ? ? -61.28 78.80 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A ALA 2 ? A ALA 3 4 1 Y 1 A ASN 3 ? A ASN 4 5 1 Y 1 A ASP 4 ? A ASP 5 6 1 Y 1 A GLN 5 ? A GLN 6 7 1 Y 1 A ASP 226 ? A ASP 227 8 1 Y 1 A ASN 227 ? A ASN 228 9 1 Y 1 A HIS 228 ? A HIS 229 10 1 Y 1 A ILE 229 ? A ILE 230 11 1 Y 1 A LYS 230 ? A LYS 231 12 1 Y 1 A GLU 231 ? A GLU 232 13 1 Y 1 A ASN 232 ? A ASN 233 14 1 Y 1 A LYS 233 ? A LYS 234 15 1 Y 1 A ASN 259 ? A ASN 260 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R01-AI116313 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01-GM046904 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01-GM053756 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #