HEADER VIRAL PROTEIN, IMMUNE SYSTEM 03-NOV-19 6UVO TITLE STRUCTURE OF ANTIBODY 3G12 BOUND TO THE CENTRAL CONSERVED DOMAIN OF TITLE 2 RSV G COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3G12 FAB LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 3G12 FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: MAJOR SURFACE GLYCOPROTEIN G; COMPND 11 CHAIN: D; COMPND 12 SYNONYM: ATTACHMENT GLYCOPROTEIN G,MEMBRANE-BOUND GLYCOPROTEIN,MG; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN SOURCE 17 A2); SOURCE 18 ORGANISM_TAXID: 11259; SOURCE 19 STRAIN: A2; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RSV, GLYCOPROTEIN, G GLYCOPROTEIN, VIRAL PROTEIN, VIRAL ATTACHMENT KEYWDS 2 PROTEIN, ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.O.FEDECHKIN,N.L.GEORGE,A.M.NUNEZ CASTREJON,J.DILLEN,L.M.KAUVAR, AUTHOR 2 R.M.DUBOIS REVDAT 4 11-OCT-23 6UVO 1 REMARK REVDAT 3 11-MAR-20 6UVO 1 JRNL REVDAT 2 01-JAN-20 6UVO 1 JRNL REVDAT 1 18-DEC-19 6UVO 0 JRNL AUTH S.O.FEDECHKIN,N.L.GEORGE,A.M.NUNEZ CASTREJON,J.R.DILLEN, JRNL AUTH 2 L.M.KAUVAR,R.M.DUBOIS JRNL TITL CONFORMATIONAL FLEXIBILITY IN RESPIRATORY SYNCYTIAL VIRUS G JRNL TITL 2 NEUTRALIZING EPITOPES. JRNL REF J.VIROL. V. 94 2020 JRNL REFN ESSN 1098-5514 JRNL PMID 31852779 JRNL DOI 10.1128/JVI.01879-19 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 23665 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.420 REMARK 3 FREE R VALUE TEST SET COUNT : 1993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.5300 - 6.9881 0.97 1612 142 0.1880 0.1637 REMARK 3 2 6.9881 - 5.5472 0.99 1573 145 0.2062 0.2185 REMARK 3 3 5.5472 - 4.8462 1.00 1578 145 0.1521 0.1813 REMARK 3 4 4.8462 - 4.4031 0.99 1549 142 0.1449 0.1579 REMARK 3 5 4.4031 - 4.0876 1.00 1548 140 0.1447 0.1677 REMARK 3 6 4.0876 - 3.8466 0.99 1548 143 0.1749 0.1838 REMARK 3 7 3.8466 - 3.6539 1.00 1528 142 0.2062 0.2406 REMARK 3 8 3.6539 - 3.4949 0.99 1544 143 0.2027 0.2266 REMARK 3 9 3.4949 - 3.3603 0.99 1537 143 0.2181 0.2576 REMARK 3 10 3.3603 - 3.2444 0.99 1537 143 0.2389 0.2436 REMARK 3 11 3.2444 - 3.1429 1.00 1540 142 0.2492 0.3180 REMARK 3 12 3.1429 - 3.0531 1.00 1533 145 0.2822 0.3051 REMARK 3 13 3.0531 - 2.9727 0.99 1512 139 0.3046 0.2951 REMARK 3 14 2.9727 - 2.9002 0.99 1533 139 0.2958 0.3109 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 3693 REMARK 3 ANGLE : 2.067 5040 REMARK 3 CHIRALITY : 0.243 566 REMARK 3 PLANARITY : 0.008 643 REMARK 3 DIHEDRAL : 24.051 1324 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -63.1997 40.4212 46.3516 REMARK 3 T TENSOR REMARK 3 T11: 0.3407 T22: 0.3948 REMARK 3 T33: 0.3468 T12: -0.0571 REMARK 3 T13: -0.0170 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.6408 L22: 5.0262 REMARK 3 L33: 1.6970 L12: -0.3531 REMARK 3 L13: -0.0336 L23: -1.5757 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: 0.0268 S13: -0.0726 REMARK 3 S21: 0.3340 S22: 0.0590 S23: 0.5314 REMARK 3 S31: -0.0995 S32: -0.1187 S33: -0.0816 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 2 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.0161 29.3576 40.0192 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.4352 REMARK 3 T33: 0.3531 T12: 0.0087 REMARK 3 T13: -0.0360 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.5909 L22: 3.5267 REMARK 3 L33: 1.1315 L12: 0.2233 REMARK 3 L13: 0.0722 L23: -1.1360 REMARK 3 S TENSOR REMARK 3 S11: 0.0690 S12: -0.0693 S13: -0.1112 REMARK 3 S21: -0.0438 S22: -0.1129 S23: -0.1460 REMARK 3 S31: 0.1477 S32: 0.1945 S33: 0.0647 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 160 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.8687 -0.9898 55.4021 REMARK 3 T TENSOR REMARK 3 T11: 0.6617 T22: 0.4010 REMARK 3 T33: 0.5704 T12: 0.0211 REMARK 3 T13: -0.1004 T23: 0.0773 REMARK 3 L TENSOR REMARK 3 L11: 6.5106 L22: 5.0540 REMARK 3 L33: 4.0144 L12: 5.0188 REMARK 3 L13: -2.0535 L23: -0.6911 REMARK 3 S TENSOR REMARK 3 S11: 0.1297 S12: -0.3054 S13: -0.0101 REMARK 3 S21: 0.3036 S22: -0.3357 S23: 0.1412 REMARK 3 S31: 0.7740 S32: 0.6278 S33: 0.1965 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UVO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1000245265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11503 REMARK 200 MONOCHROMATOR : SI(111) KHOZU REMARK 200 OPTICS : PILATUS3 S, 25HZ, S/N 60-0134 REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23682 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 74.531 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.73200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5K59 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, 100MM SODIUM REMARK 280 ACETATE TRIHYDRATE PH4.4, VAPOR DIFFUSION, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.59000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.18000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 63.18000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.59000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS L 213 REMARK 465 LYS H 230 REMARK 465 THR H 231 REMARK 465 HIS H 232 REMARK 465 MET D 155 REMARK 465 GLY D 156 REMARK 465 SER D 157 REMARK 465 LYS D 158 REMARK 465 PRO D 159 REMARK 465 PRO D 190 REMARK 465 ASN D 191 REMARK 465 LYS D 192 REMARK 465 LYS D 193 REMARK 465 PRO D 194 REMARK 465 GLY D 195 REMARK 465 LYS D 196 REMARK 465 LYS D 197 REMARK 465 HIS D 198 REMARK 465 HIS D 199 REMARK 465 HIS D 200 REMARK 465 HIS D 201 REMARK 465 HIS D 202 REMARK 465 HIS D 203 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER H 30 OG1 THR H 75 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS D 186 CA CYS D 186 CB -0.101 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU L 21 N - CA - CB ANGL. DEV. = -17.9 DEGREES REMARK 500 CYS L 23 CA - CB - SG ANGL. DEV. = 7.2 DEGREES REMARK 500 SER L 126 N - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 PHE D 163 CB - CA - C ANGL. DEV. = -18.3 DEGREES REMARK 500 PHE D 163 N - CA - CB ANGL. DEV. = -21.5 DEGREES REMARK 500 PHE D 163 CB - CG - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 PHE D 163 N - CA - C ANGL. DEV. = 34.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 30 -127.86 48.86 REMARK 500 ALA L 51 -7.29 72.24 REMARK 500 SER L 52 -26.03 -148.37 REMARK 500 ALA L 84 -174.86 -173.42 REMARK 500 ASP D 162 45.80 73.30 REMARK 500 SER D 177 -121.97 56.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 CYS L 133 12.03 REMARK 500 REMARK 500 REMARK: NULL DBREF 6UVO L 1 213 PDB 6UVO 6UVO 1 213 DBREF 6UVO H 1 232 PDB 6UVO 6UVO 1 232 DBREF 6UVO D 157 197 UNP P03423 GLYC_HRSVA 157 197 SEQADV 6UVO MET D 155 UNP P03423 INITIATING METHIONINE SEQADV 6UVO GLY D 156 UNP P03423 EXPRESSION TAG SEQADV 6UVO HIS D 198 UNP P03423 EXPRESSION TAG SEQADV 6UVO HIS D 199 UNP P03423 EXPRESSION TAG SEQADV 6UVO HIS D 200 UNP P03423 EXPRESSION TAG SEQADV 6UVO HIS D 201 UNP P03423 EXPRESSION TAG SEQADV 6UVO HIS D 202 UNP P03423 EXPRESSION TAG SEQADV 6UVO HIS D 203 UNP P03423 EXPRESSION TAG SEQRES 1 L 213 GLU ILE VAL MET THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 213 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 213 GLN SER VAL ASN SER ASN LEU ALA TRP TYR GLN HIS LYS SEQRES 4 L 213 PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SER SEQRES 5 L 213 THR ARG ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 L 213 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 213 GLN SER GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN TYR SEQRES 8 L 213 ASN ASN TRP PRO LEU PHE GLY PRO GLY THR LYS VAL ASP SEQRES 9 L 213 LEU LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 L 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 L 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 L 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 L 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 L 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 L 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 L 213 ASN ARG GLY GLU CYS SEQRES 1 H 232 GLN LEU GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 232 PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 H 232 GLY SER ILE SER SER SER ASN TYR TYR TRP GLY TRP ILE SEQRES 4 H 232 ARG GLN PRO PRO GLY LYS GLY LEU GLU TRP ILE ALA SER SEQRES 5 H 232 ILE HIS ASP SER GLY SER ILE TYR TYR ASN PRO SER LEU SEQRES 6 H 232 ARG SER ARG VAL THR ILE SER VAL ASP THR SER LYS ASN SEQRES 7 H 232 GLN PHE SER LEU LYS LEU SER SER VAL THR ALA ALA ASP SEQRES 8 H 232 THR ALA VAL TYR TYR CYS ALA ARG HIS LEU VAL TRP PHE SEQRES 9 H 232 GLY GLU LEU ARG ASN ASN TRP PHE ASP PRO TRP GLY GLN SEQRES 10 H 232 GLY THR LEU VAL THR VAL ALA SER ALA SER THR LYS GLY SEQRES 11 H 232 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 H 232 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 232 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 232 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 232 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 232 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 232 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 232 LYS VAL GLU PRO LYS SER CYS ASP LYS THR HIS SEQRES 1 D 49 MET GLY SER LYS PRO ASN ASN ASP PHE HIS PHE GLU VAL SEQRES 2 D 49 PHE ASN PHE VAL PRO CYS SER ILE CYS SER ASN ASN PRO SEQRES 3 D 49 THR CYS TRP ALA ILE CYS LYS ARG ILE PRO ASN LYS LYS SEQRES 4 D 49 PRO GLY LYS LYS HIS HIS HIS HIS HIS HIS HELIX 1 AA1 GLN L 79 PHE L 83 5 5 HELIX 2 AA2 SER L 120 SER L 126 1 7 HELIX 3 AA3 LYS L 182 LYS L 187 1 6 HELIX 4 AA4 ASN H 62 SER H 67 1 6 HELIX 5 AA5 THR H 88 THR H 92 5 5 HELIX 6 AA6 SER H 139 LYS H 141 5 3 HELIX 7 AA7 SER H 168 ALA H 170 5 3 HELIX 8 AA8 SER H 199 LEU H 201 5 3 HELIX 9 AA9 LYS H 213 ASN H 216 5 4 HELIX 10 AB1 PRO D 172 CYS D 176 5 5 HELIX 11 AB2 ASN D 179 CYS D 186 1 8 SHEET 1 AA1 4 MET L 4 SER L 7 0 SHEET 2 AA1 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA1 4 ASP L 70 ILE L 75 -1 O ILE L 75 N ALA L 19 SHEET 4 AA1 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA2 6 THR L 10 VAL L 13 0 SHEET 2 AA2 6 THR L 101 LEU L 105 1 O ASP L 104 N LEU L 11 SHEET 3 AA2 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 103 SHEET 4 AA2 6 LEU L 33 HIS L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA2 6 ARG L 45 TYR L 49 -1 O ARG L 45 N GLN L 37 SHEET 6 AA2 6 THR L 53 ARG L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA3 4 THR L 10 VAL L 13 0 SHEET 2 AA3 4 THR L 101 LEU L 105 1 O ASP L 104 N LEU L 11 SHEET 3 AA3 4 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 103 SHEET 4 AA3 4 LEU L 96 PHE L 97 -1 O LEU L 96 N GLN L 90 SHEET 1 AA4 4 SER L 113 PHE L 117 0 SHEET 2 AA4 4 THR L 128 PHE L 138 -1 O VAL L 132 N PHE L 117 SHEET 3 AA4 4 TYR L 172 SER L 181 -1 O LEU L 178 N VAL L 131 SHEET 4 AA4 4 SER L 158 VAL L 162 -1 N GLN L 159 O THR L 177 SHEET 1 AA5 4 ALA L 152 LEU L 153 0 SHEET 2 AA5 4 LYS L 144 VAL L 149 -1 N VAL L 149 O ALA L 152 SHEET 3 AA5 4 VAL L 190 THR L 196 -1 O ALA L 192 N LYS L 148 SHEET 4 AA5 4 VAL L 204 ASN L 209 -1 O VAL L 204 N VAL L 195 SHEET 1 AA6 4 GLN H 3 SER H 7 0 SHEET 2 AA6 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA6 4 GLN H 79 LEU H 84 -1 O PHE H 80 N CYS H 22 SHEET 4 AA6 4 VAL H 69 ASP H 74 -1 N ASP H 74 O GLN H 79 SHEET 1 AA7 6 LEU H 11 VAL H 12 0 SHEET 2 AA7 6 THR H 119 VAL H 123 1 O THR H 122 N VAL H 12 SHEET 3 AA7 6 ALA H 93 TRP H 103 -1 N TYR H 95 O THR H 119 SHEET 4 AA7 6 TYR H 35 GLN H 41 -1 N ILE H 39 O TYR H 96 SHEET 5 AA7 6 GLU H 48 HIS H 54 -1 O GLU H 48 N ARG H 40 SHEET 6 AA7 6 ILE H 59 TYR H 61 -1 O TYR H 60 N SER H 52 SHEET 1 AA8 4 LEU H 11 VAL H 12 0 SHEET 2 AA8 4 THR H 119 VAL H 123 1 O THR H 122 N VAL H 12 SHEET 3 AA8 4 ALA H 93 TRP H 103 -1 N TYR H 95 O THR H 119 SHEET 4 AA8 4 ASN H 109 TRP H 115 -1 O TRP H 111 N LEU H 101 SHEET 1 AA9 4 SER H 132 LEU H 136 0 SHEET 2 AA9 4 THR H 147 TYR H 157 -1 O GLY H 151 N LEU H 136 SHEET 3 AA9 4 TYR H 188 PRO H 197 -1 O LEU H 190 N VAL H 154 SHEET 4 AA9 4 VAL H 175 THR H 177 -1 N HIS H 176 O VAL H 193 SHEET 1 AB1 4 THR H 143 SER H 144 0 SHEET 2 AB1 4 THR H 147 TYR H 157 -1 O THR H 147 N SER H 144 SHEET 3 AB1 4 TYR H 188 PRO H 197 -1 O LEU H 190 N VAL H 154 SHEET 4 AB1 4 VAL H 181 LEU H 182 -1 N VAL H 181 O SER H 189 SHEET 1 AB2 3 THR H 163 TRP H 166 0 SHEET 2 AB2 3 ILE H 207 HIS H 212 -1 O ASN H 209 N SER H 165 SHEET 3 AB2 3 THR H 217 LYS H 222 -1 O VAL H 219 N VAL H 210 SSBOND 1 CYS L 23 CYS L 88 1555 1555 1.98 SSBOND 2 CYS L 133 CYS L 193 1555 1555 2.07 SSBOND 3 CYS H 22 CYS H 97 1555 1555 2.11 SSBOND 4 CYS H 152 CYS H 208 1555 1555 1.98 SSBOND 5 CYS D 173 CYS D 186 1555 1555 2.11 SSBOND 6 CYS D 176 CYS D 182 1555 1555 2.05 CISPEP 1 SER L 7 PRO L 8 0 2.67 CISPEP 2 TYR L 139 PRO L 140 0 4.67 CISPEP 3 SER H 30 SER H 31 0 -0.03 CISPEP 4 ASP H 113 PRO H 114 0 3.75 CISPEP 5 PHE H 158 PRO H 159 0 -1.45 CISPEP 6 GLU H 160 PRO H 161 0 -2.47 CRYST1 139.330 139.330 94.770 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007177 0.004144 0.000000 0.00000 SCALE2 0.000000 0.008288 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010552 0.00000