HEADER DNA BINDING PROTEIN/DNA 05-NOV-19 6UWK TITLE ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED STABILITY AND TITLE 2 FULLY ALTERED SPECIFICITY TARGETING HUMAN CHROMOSOME 11 TRANS TITLE 3 INTEGRATION SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: I-ONUI-E-THERM-HCHR11V3; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (27-MER); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (27-MER); COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630; SOURCE 10 MOL_ID: 3; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS MEGANUCLEASE, HOMING ENDONUCLEASE, DNA BINDING PROTEIN, DNA BINDING KEYWDS 2 PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.WERTHER,B.L.STODDARD REVDAT 4 11-OCT-23 6UWK 1 LINK REVDAT 3 22-JUL-20 6UWK 1 JRNL REVDAT 2 13-MAY-20 6UWK 1 JRNL REVDAT 1 18-DEC-19 6UWK 0 JRNL AUTH A.R.LAMBERT,J.P.HALLINAN,R.WERTHER,D.GLOW,B.L.STODDARD JRNL TITL OPTIMIZATION OF PROTEIN THERMOSTABILITY AND EXPLOITATION OF JRNL TITL 2 RECOGNITION BEHAVIOR TO ENGINEER ALTERED PROTEIN-DNA JRNL TITL 3 RECOGNITION. JRNL REF STRUCTURE V. 28 760 2020 JRNL REFN ISSN 0969-2126 JRNL PMID 32359399 JRNL DOI 10.1016/J.STR.2020.04.009 REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 13362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.5240 - 5.4450 1.00 1318 147 0.2318 0.2801 REMARK 3 2 5.4450 - 4.3267 1.00 1232 137 0.2103 0.2653 REMARK 3 3 4.3267 - 3.7812 1.00 1230 137 0.2008 0.2383 REMARK 3 4 3.7812 - 3.4361 1.00 1210 134 0.2130 0.2701 REMARK 3 5 3.4361 - 3.1902 1.00 1176 129 0.2231 0.2591 REMARK 3 6 3.1902 - 3.0023 1.00 1222 137 0.2709 0.3289 REMARK 3 7 3.0023 - 2.8521 1.00 1194 132 0.2807 0.3595 REMARK 3 8 2.8521 - 2.7281 1.00 1174 131 0.2859 0.3836 REMARK 3 9 2.7281 - 2.6231 1.00 1190 132 0.2793 0.3745 REMARK 3 10 2.6231 - 2.5333 0.90 1080 120 0.2866 0.3341 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UWK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1000245331. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 108 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13421 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.33500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.1 REMARK 200 STARTING MODEL: 3QQY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE PH 6.0, 200MM REMARK 280 CALCIUM ACETATE, 35% PEG 400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.18500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.09950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.31750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.09950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.18500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.31750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -146.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 6 REMARK 465 ARG A 301 REMARK 465 DG B -1 REMARK 465 DG B 25 REMARK 465 DC C 0 REMARK 465 DC C 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 ASP A 74 CG OD1 OD2 REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 ARG A 133 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 145 CG CD OE1 OE2 REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 GLU A 152 CG CD OE1 OE2 REMARK 470 ILE A 153 CG1 CG2 CD1 REMARK 470 ILE A 154 CG1 CG2 CD1 REMARK 470 SER A 155 OG REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 LEU A 160 CG CD1 CD2 REMARK 470 PHE A 168 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 ASN A 228 CG OD1 ND2 REMARK 470 THR A 257 OG1 CG2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 GLU A 285 CG CD OE1 OE2 REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 LEU A 295 CG CD1 CD2 REMARK 470 LYS A 299 CG CD CE NZ REMARK 470 DG B 0 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 22 O HOH A 501 2.02 REMARK 500 OP2 DG B 15 O HOH A 501 2.07 REMARK 500 OE1 GLN A 46 NZ LYS A 80 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 8 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 139 -111.90 53.81 REMARK 500 LYS A 189 64.35 -64.14 REMARK 500 GLN A 204 142.59 -170.43 REMARK 500 ASP A 208 42.00 -99.23 REMARK 500 CYS A 221 -178.27 -170.93 REMARK 500 SER A 230 -130.30 62.71 REMARK 500 LYS A 248 -69.89 -122.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 21 O REMARK 620 2 ASP A 178 OD1 83.9 REMARK 620 3 ASP A 178 OD2 90.6 48.8 REMARK 620 4 HOH A 508 O 97.2 123.1 74.3 REMARK 620 5 HOH A 510 O 70.1 153.6 133.0 66.6 REMARK 620 6 DC B 14 OP1 171.1 103.6 97.8 82.6 101.9 REMARK 620 7 DA C 16 OP1 71.6 82.8 130.5 151.3 84.7 104.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE1 REMARK 620 2 GLY A 177 O 68.7 REMARK 620 3 HOH A 512 O 170.7 102.6 REMARK 620 4 DG B 15 OP2 72.5 73.3 102.2 REMARK 620 5 HOH C 102 O 93.0 161.6 95.8 104.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE2 REMARK 620 2 THR A 48 O 92.4 REMARK 620 3 HOH A 514 O 92.5 75.5 REMARK 620 4 DA C 16 OP2 85.4 169.7 94.6 REMARK 620 5 HOH C 101 O 174.4 88.3 82.4 92.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 65 O REMARK 620 2 ILE A 153 O 72.6 REMARK 620 3 HOH A 506 O 103.0 36.7 REMARK 620 4 HOH A 515 O 83.2 155.3 162.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 69 O REMARK 620 2 DC B 6 OP1 111.1 REMARK 620 3 HOH B 107 O 166.2 68.6 REMARK 620 4 HOH B 108 O 108.1 81.3 85.6 REMARK 620 5 HOH B 109 O 91.9 92.2 74.4 160.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD1 REMARK 620 2 HOH A 517 O 87.5 REMARK 620 3 HOH A 519 O 92.7 175.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 408 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 504 O REMARK 620 2 DC B 5 OP2 115.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 DBREF 6UWK A 6 301 PDB 6UWK 6UWK 6 301 DBREF 6UWK B -1 25 PDB 6UWK 6UWK -1 25 DBREF 6UWK C 0 26 PDB 6UWK 6UWK 0 26 SEQRES 1 A 296 MET ALA SER SER ILE ASN PRO TRP ILE LEU THR GLY PHE SEQRES 2 A 296 ALA ASP ALA GLU GLY SER PHE LEU LEU ARG ILE ARG LYS SEQRES 3 A 296 TYR SER GLN THR ARG VAL GLY TYR LEU THR GLU LEU GLY SEQRES 4 A 296 PHE GLN ILE THR LEU HIS ASN LYS ASP LYS SER ILE LEU SEQRES 5 A 296 GLU ASN ILE GLN SER THR TRP GLY VAL GLY VAL ILE ALA SEQRES 6 A 296 ASN SER GLY ASP ASN ALA VAL SER LEU LYS VAL THR ARG SEQRES 7 A 296 PHE GLU ASP LEU LYS VAL ILE ILE ASP HIS PHE GLU LYS SEQRES 8 A 296 TYR PRO LEU ILE THR GLN LYS TYR ALA ASP TYR MET LEU SEQRES 9 A 296 PHE LYS GLN ALA PHE ASN VAL MET GLU ASN LYS GLU HIS SEQRES 10 A 296 LEU THR ILE GLU GLY ILE LYS GLU LEU VAL ARG ILE LYS SEQRES 11 A 296 ALA LYS LEU ASN TRP GLY LEU THR ASP GLU LEU LYS LYS SEQRES 12 A 296 ALA PHE PRO GLU ILE ILE SER LYS GLU ARG SER LEU ILE SEQRES 13 A 296 ASN LYS ASN ILE PRO ASN PHE LYS TRP LEU ALA GLY PHE SEQRES 14 A 296 THR SER GLY ASP GLY CYS PHE PHE VAL ASN LEU SER LYS SEQRES 15 A 296 LYS LYS THR LYS LEU GLY VAL GLN VAL LYS LEU VAL PHE SEQRES 16 A 296 SER ILE SER GLN HIS ILE ARG ASP LYS ASN LEU MET ASN SEQRES 17 A 296 SER LEU ILE THR TYR LEU GLY CYS GLY TYR ILE LYS LYS SEQRES 18 A 296 LYS ASN LYS SER GLU PHE SER TRP LEU GLU PHE VAL VAL SEQRES 19 A 296 THR LYS PHE SER ASP ILE ARG ASP LYS ILE ILE PRO PHE SEQRES 20 A 296 PHE GLN GLU TYR THR LEU ILE GLY THR LYS LEU LYS ASP SEQRES 21 A 296 PHE GLU ASP TRP CYS LYS VAL ALA LYS LEU ILE GLU GLU SEQRES 22 A 296 LYS LYS HIS LEU THR GLU GLU GLY LEU ASP GLU ILE LYS SEQRES 23 A 296 LYS ILE LYS LEU ASN MET ASN LYS GLY ARG SEQRES 1 B 27 DG DG DG DC DC DT DC DC DA DC DT DT DA SEQRES 2 B 27 DT DT DC DG DA DC DC DT DC DT DC DA DG SEQRES 3 B 27 DG SEQRES 1 C 27 DC DC DC DT DG DA DG DA DG DG DT DC DG SEQRES 2 C 27 DA DA DT DA DA DG DT DG DG DA DG DG DC SEQRES 3 C 27 DC HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET CA A 406 1 HET CA A 407 1 HET CA A 408 1 HET EDO A 409 10 HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 CA 8(CA 2+) FORMUL 12 EDO C2 H6 O2 FORMUL 13 HOH *31(H2 O) HELIX 1 AA1 ASN A 11 GLU A 22 1 12 HELIX 2 AA2 ASP A 53 GLY A 65 1 13 HELIX 3 AA3 ARG A 83 GLU A 85 5 3 HELIX 4 AA4 ASP A 86 TYR A 97 1 12 HELIX 5 AA5 GLN A 102 ASN A 119 1 18 HELIX 6 AA6 LYS A 120 LEU A 123 5 4 HELIX 7 AA7 THR A 124 ALA A 136 1 13 HELIX 8 AA8 THR A 143 PHE A 150 1 8 HELIX 9 AA9 ASN A 167 ASP A 178 1 12 HELIX 10 AB1 ASP A 208 GLY A 220 1 13 HELIX 11 AB2 LYS A 241 LYS A 248 1 8 HELIX 12 AB3 LYS A 248 TYR A 256 1 9 HELIX 13 AB4 GLY A 260 GLU A 278 1 19 HELIX 14 AB5 LYS A 279 THR A 283 5 5 HELIX 15 AB6 GLU A 284 LYS A 299 1 16 SHEET 1 AA1 4 SER A 24 LYS A 31 0 SHEET 2 AA1 4 TYR A 39 HIS A 50 -1 O GLU A 42 N ARG A 28 SHEET 3 AA1 4 ALA A 76 VAL A 81 -1 O VAL A 81 N PHE A 45 SHEET 4 AA1 4 VAL A 68 ASN A 71 -1 N VAL A 68 O LYS A 80 SHEET 1 AA2 4 GLY A 179 LYS A 187 0 SHEET 2 AA2 4 VAL A 194 HIS A 205 -1 O GLN A 195 N SER A 186 SHEET 3 AA2 4 PHE A 232 VAL A 239 -1 O LEU A 235 N GLN A 204 SHEET 4 AA2 4 TYR A 223 LYS A 229 -1 N LYS A 229 O PHE A 232 LINK O ALA A 21 CA CA A 401 1555 1555 2.24 LINK OE1 GLU A 22 CA CA A 403 1555 1555 2.95 LINK OE2 GLU A 22 CA CA A 405 1555 1555 2.30 LINK O THR A 48 CA CA A 405 1555 1555 2.44 LINK O GLY A 65 CA CA A 404 1555 1555 2.45 LINK O ILE A 69 CA CA A 402 1555 1555 2.63 LINK OD1 ASP A 92 CA CA A 407 1555 1555 2.34 LINK O ILE A 153 CA CA A 404 1555 1455 2.33 LINK O GLY A 177 CA CA A 403 1555 1555 2.40 LINK OD1 ASP A 178 CA CA A 401 1555 1555 2.73 LINK OD2 ASP A 178 CA CA A 401 1555 1555 2.57 LINK CA CA A 401 O HOH A 508 1555 1555 2.61 LINK CA CA A 401 O HOH A 510 1555 1555 2.62 LINK CA CA A 401 OP1 DC B 14 1555 1555 2.23 LINK CA CA A 401 OP1 DA C 16 1555 1555 2.32 LINK CA CA A 402 OP1 DC B 6 1555 1555 2.36 LINK CA CA A 402 O HOH B 107 1555 1555 3.04 LINK CA CA A 402 O HOH B 108 1555 1555 2.75 LINK CA CA A 402 O HOH B 109 1555 1555 2.37 LINK CA CA A 403 O HOH A 512 1555 1555 2.46 LINK CA CA A 403 OP2 DG B 15 1555 1555 2.36 LINK CA CA A 403 O HOH C 102 1555 1555 2.43 LINK CA CA A 404 O HOH A 506 1555 1555 2.86 LINK CA CA A 404 O HOH A 515 1555 1655 2.77 LINK CA CA A 405 O HOH A 514 1555 1555 2.44 LINK CA CA A 405 OP2 DA C 16 1555 1555 2.25 LINK CA CA A 405 O HOH C 101 1555 1555 2.31 LINK CA CA A 406 OP1 DA C 5 1555 1555 2.32 LINK CA CA A 407 O HOH A 517 1555 4545 2.67 LINK CA CA A 407 O HOH A 519 1555 4545 2.81 LINK CA CA A 408 O HOH A 504 1555 1555 2.98 LINK CA CA A 408 OP2 DC B 5 1555 1555 2.25 SITE 1 AC1 6 ALA A 21 ASP A 178 HOH A 508 HOH A 510 SITE 2 AC1 6 DC B 14 DA C 16 SITE 1 AC2 5 ILE A 69 DC B 6 HOH B 107 HOH B 108 SITE 2 AC2 5 HOH B 109 SITE 1 AC3 5 GLU A 22 GLY A 177 HOH A 512 DG B 15 SITE 2 AC3 5 HOH C 102 SITE 1 AC4 4 GLY A 65 ILE A 153 HOH A 506 HOH A 515 SITE 1 AC5 6 GLU A 22 THR A 48 HOH A 514 DT C 15 SITE 2 AC5 6 DA C 16 HOH C 101 SITE 1 AC6 2 SER A 243 DA C 5 SITE 1 AC7 3 ASP A 92 HOH A 517 HOH A 519 SITE 1 AC8 4 THR A 82 ARG A 83 HOH A 504 DC B 5 SITE 1 AC9 5 LEU A 26 LEU A 27 LYS A 135 DG C 18 SITE 2 AC9 5 DT C 19 CRYST1 38.370 62.635 160.199 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026062 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015966 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006242 0.00000