HEADER TRANSFERASE 07-NOV-19 6UX8 TITLE STRUCTURE OF MONOBODY 33 MLKL N-TERMINAL DOMAIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MIXED LINEAGE KINASE DOMAIN-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HMLKL; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MONOBODY; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MLKL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 GENE: MONOBODY; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN INTERACTIONS, CELL DEATH, RIPK3, PROGRAMMED NECROSIS, PROTEIN KEYWDS 2 ENGINEERING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.W.BIRKINSHAW,E.J.PETRIE,J.M.MURPHY REVDAT 4 11-OCT-23 6UX8 1 LINK REVDAT 3 29-APR-20 6UX8 1 JRNL REVDAT 2 15-APR-20 6UX8 1 JRNL REVDAT 1 01-APR-20 6UX8 0 JRNL AUTH E.J.PETRIE,R.W.BIRKINSHAW,A.KOIDE,E.DENBAUM,J.M.HILDEBRAND, JRNL AUTH 2 S.E.GARNISH,K.A.DAVIES,J.J.SANDOW,A.L.SAMSON,X.GAVIN, JRNL AUTH 3 C.FITZGIBBON,S.N.YOUNG,P.J.HENNESSY,P.P.C.SMITH,A.I.WEBB, JRNL AUTH 4 P.E.CZABOTAR,S.KOIDE,J.M.MURPHY JRNL TITL IDENTIFICATION OF MLKL MEMBRANE TRANSLOCATION AS A JRNL TITL 2 CHECKPOINT IN NECROPTOTIC CELL DEATH USING MONOBODIES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 8468 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32234780 JRNL DOI 10.1073/PNAS.1919960117 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 8543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.480 REMARK 3 FREE R VALUE TEST SET COUNT : 468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7600 - 3.6100 1.00 2793 157 0.2090 0.2682 REMARK 3 2 3.6100 - 2.8600 1.00 2663 174 0.2867 0.3253 REMARK 3 3 2.8600 - 2.5000 0.99 2619 137 0.3406 0.3496 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.9258 -32.3241 33.9153 REMARK 3 T TENSOR REMARK 3 T11: 0.3388 T22: 0.3610 REMARK 3 T33: 0.5808 T12: -0.0621 REMARK 3 T13: 0.1606 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 5.8634 L22: 3.7565 REMARK 3 L33: 4.7652 L12: -1.0835 REMARK 3 L13: 4.2228 L23: -0.7235 REMARK 3 S TENSOR REMARK 3 S11: 0.1480 S12: -0.4220 S13: 0.2145 REMARK 3 S21: 0.2836 S22: 0.0518 S23: 0.5228 REMARK 3 S31: 0.6664 S32: -0.5182 S33: -0.1322 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.9933 -33.3412 23.4068 REMARK 3 T TENSOR REMARK 3 T11: 0.4392 T22: 0.4249 REMARK 3 T33: 0.5147 T12: -0.0636 REMARK 3 T13: 0.0043 T23: -0.1488 REMARK 3 L TENSOR REMARK 3 L11: 8.4496 L22: 6.6159 REMARK 3 L33: 5.3822 L12: -2.2446 REMARK 3 L13: 3.7445 L23: -1.7507 REMARK 3 S TENSOR REMARK 3 S11: -0.3530 S12: 0.0309 S13: -0.2000 REMARK 3 S21: -0.4968 S22: 0.4372 S23: 0.1475 REMARK 3 S31: -0.1016 S32: -0.0559 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1833 -33.4920 29.9105 REMARK 3 T TENSOR REMARK 3 T11: 0.3629 T22: 0.4388 REMARK 3 T33: 0.6043 T12: 0.0443 REMARK 3 T13: 0.0488 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 3.1290 L22: 5.7091 REMARK 3 L33: 5.2416 L12: -1.9728 REMARK 3 L13: 3.2689 L23: -3.0145 REMARK 3 S TENSOR REMARK 3 S11: 0.1124 S12: -0.1823 S13: -0.0655 REMARK 3 S21: -0.2984 S22: 0.0922 S23: -0.7863 REMARK 3 S31: 0.7685 S32: 0.2012 S33: -0.0934 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8892 -27.7780 37.1201 REMARK 3 T TENSOR REMARK 3 T11: 0.3643 T22: 0.5165 REMARK 3 T33: 0.7683 T12: -0.0027 REMARK 3 T13: 0.1058 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.6919 L22: 3.2152 REMARK 3 L33: 1.5885 L12: 1.2613 REMARK 3 L13: -0.9049 L23: -1.0861 REMARK 3 S TENSOR REMARK 3 S11: -0.0790 S12: -0.3882 S13: -0.6688 REMARK 3 S21: -0.1378 S22: 0.4148 S23: -0.4594 REMARK 3 S31: -0.2084 S32: 0.2936 S33: -0.2999 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.2928 -10.0523 18.2864 REMARK 3 T TENSOR REMARK 3 T11: 0.2725 T22: 0.4889 REMARK 3 T33: 0.7359 T12: -0.0521 REMARK 3 T13: 0.1021 T23: 0.1226 REMARK 3 L TENSOR REMARK 3 L11: 1.6676 L22: 1.5500 REMARK 3 L33: 9.6051 L12: 0.9690 REMARK 3 L13: 3.9343 L23: 1.7335 REMARK 3 S TENSOR REMARK 3 S11: -0.4321 S12: 0.6141 S13: -0.7569 REMARK 3 S21: -0.4195 S22: 0.3882 S23: -0.4200 REMARK 3 S31: -0.2429 S32: 1.0324 S33: 0.1716 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.4732 -10.4390 26.5773 REMARK 3 T TENSOR REMARK 3 T11: 0.2825 T22: 0.3194 REMARK 3 T33: 0.5355 T12: -0.0527 REMARK 3 T13: 0.0150 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 5.6208 L22: 3.6303 REMARK 3 L33: 4.0450 L12: -0.3476 REMARK 3 L13: -0.2306 L23: -0.7905 REMARK 3 S TENSOR REMARK 3 S11: -0.2446 S12: 0.1493 S13: 0.1850 REMARK 3 S21: -0.6543 S22: -0.1155 S23: -0.4874 REMARK 3 S31: -0.0988 S32: -0.0313 S33: 0.3651 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 44 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6052 0.4520 29.9045 REMARK 3 T TENSOR REMARK 3 T11: 0.6499 T22: 0.3561 REMARK 3 T33: 0.4075 T12: -0.0140 REMARK 3 T13: 0.0143 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 9.5652 L22: 7.3454 REMARK 3 L33: 8.7815 L12: -1.4544 REMARK 3 L13: 0.6547 L23: 2.2131 REMARK 3 S TENSOR REMARK 3 S11: 0.4494 S12: -0.1958 S13: 1.5191 REMARK 3 S21: 0.2450 S22: -0.7131 S23: 0.1404 REMARK 3 S31: -0.9480 S32: 0.8692 S33: 0.3279 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.6688 -4.1180 25.1923 REMARK 3 T TENSOR REMARK 3 T11: 0.3629 T22: 0.3070 REMARK 3 T33: 0.5243 T12: -0.0968 REMARK 3 T13: -0.0283 T23: -0.0684 REMARK 3 L TENSOR REMARK 3 L11: 6.2353 L22: 8.4936 REMARK 3 L33: 2.9170 L12: -5.9077 REMARK 3 L13: 0.7954 L23: -2.7545 REMARK 3 S TENSOR REMARK 3 S11: 0.2274 S12: -0.1400 S13: 0.1120 REMARK 3 S21: 0.2195 S22: -0.0689 S23: -0.2533 REMARK 3 S31: 0.0147 S32: 0.0287 S33: -0.0758 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 81 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.8368 -15.2531 30.1149 REMARK 3 T TENSOR REMARK 3 T11: 0.3873 T22: 0.5850 REMARK 3 T33: 0.7859 T12: -0.1718 REMARK 3 T13: 0.1112 T23: 0.0475 REMARK 3 L TENSOR REMARK 3 L11: 7.9644 L22: 1.3788 REMARK 3 L33: 2.3535 L12: -1.0844 REMARK 3 L13: 1.7663 L23: 1.3148 REMARK 3 S TENSOR REMARK 3 S11: -0.1221 S12: 0.3395 S13: -0.6148 REMARK 3 S21: -0.5430 S22: -1.5770 S23: -3.3345 REMARK 3 S31: 0.0342 S32: 1.7741 S33: 1.8507 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.7667 -0.5041 17.6501 REMARK 3 T TENSOR REMARK 3 T11: 0.2506 T22: 0.5767 REMARK 3 T33: 0.7004 T12: 0.0035 REMARK 3 T13: 0.1609 T23: 0.1067 REMARK 3 L TENSOR REMARK 3 L11: 7.9818 L22: 7.8931 REMARK 3 L33: 8.8614 L12: -4.9845 REMARK 3 L13: 8.2997 L23: -4.1444 REMARK 3 S TENSOR REMARK 3 S11: -0.6168 S12: -0.6869 S13: 0.1752 REMARK 3 S21: 0.1671 S22: -0.1665 S23: -0.3255 REMARK 3 S31: -0.2874 S32: 0.0565 S33: 0.4896 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UX8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1000245343. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8590 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 68.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.17200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 1.50600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6D0J, 4BTF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG-MME 550, 0.1 M MES PH 6.5, REMARK 280 0.01 M ZINC ACETATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.14700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.02150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.70900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.02150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.14700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.70900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -58.29400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -29.70900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.02150 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 ARG A 153 REMARK 465 ASP A 154 REMARK 465 GLY B 1 REMARK 465 ALA B 2 REMARK 465 MET B 3 REMARK 465 GLY B 4 REMARK 465 SER B 5 REMARK 465 VAL B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 GLY B 85 REMARK 465 TYR B 86 REMARK 465 SER B 87 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 1 OG REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 GLN A 93 CG CD OE1 NE2 REMARK 470 LYS A 95 CG CD CE NZ REMARK 470 ARG A 146 CG CD NE CZ NH1 NH2 REMARK 470 MET A 150 CG SD CE REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 9 CG1 CG2 REMARK 470 LYS B 12 CG CD CE NZ REMARK 470 ASN B 47 CG OD1 ND2 REMARK 470 TYR B 83 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B 84 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 88 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 129 -141.60 -129.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 6 ND1 REMARK 620 2 CYS A 86 SG 60.9 REMARK 620 3 HOH A 301 O 66.2 5.6 REMARK 620 4 HOH A 308 O 65.8 5.6 4.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 15 NE2 REMARK 620 2 GLU A 19 OE1 93.0 REMARK 620 3 HIS A 33 NE2 105.0 102.0 REMARK 620 4 HOH A 307 O 117.5 103.0 128.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 71 OE2 REMARK 620 2 LYS A 104 NZ 90.2 REMARK 620 3 GLU B 14 OE1 121.4 38.7 REMARK 620 4 GLU B 14 OE2 121.5 36.7 3.6 REMARK 620 5 HOH B 206 O 125.4 123.0 84.9 87.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 107 OD1 REMARK 620 2 ASP A 107 OD2 66.5 REMARK 620 3 GLU A 111 OE1 117.6 75.0 REMARK 620 4 ASP B 72 OD1 86.5 129.6 82.3 REMARK 620 5 ASP B 72 OD2 82.9 128.0 84.6 3.7 REMARK 620 6 ASN B 94 OD1 81.9 129.8 87.7 5.9 3.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 101 DBREF 6UX8 A 5 154 UNP Q8NB16 MLKL_HUMAN 5 154 DBREF 6UX8 B 1 97 PDB 6UX8 6UX8 1 97 SEQADV 6UX8 GLY A -3 UNP Q8NB16 EXPRESSION TAG SEQADV 6UX8 ALA A -2 UNP Q8NB16 EXPRESSION TAG SEQADV 6UX8 MET A -1 UNP Q8NB16 EXPRESSION TAG SEQADV 6UX8 GLY A 0 UNP Q8NB16 EXPRESSION TAG SEQADV 6UX8 SER A 1 UNP Q8NB16 EXPRESSION TAG SEQADV 6UX8 GLU A 2 UNP Q8NB16 EXPRESSION TAG SEQADV 6UX8 ASN A 3 UNP Q8NB16 EXPRESSION TAG SEQADV 6UX8 LEU A 4 UNP Q8NB16 EXPRESSION TAG SEQRES 1 A 158 GLY ALA MET GLY SER GLU ASN LEU LYS HIS ILE ILE THR SEQRES 2 A 158 LEU GLY GLN VAL ILE HIS LYS ARG CYS GLU GLU MET LYS SEQRES 3 A 158 TYR CYS LYS LYS GLN CYS ARG ARG LEU GLY HIS ARG VAL SEQRES 4 A 158 LEU GLY LEU ILE LYS PRO LEU GLU MET LEU GLN ASP GLN SEQRES 5 A 158 GLY LYS ARG SER VAL PRO SER GLU LYS LEU THR THR ALA SEQRES 6 A 158 MET ASN ARG PHE LYS ALA ALA LEU GLU GLU ALA ASN GLY SEQRES 7 A 158 GLU ILE GLU LYS PHE SER ASN ARG SER ASN ILE CYS ARG SEQRES 8 A 158 PHE LEU THR ALA SER GLN ASP LYS ILE LEU PHE LYS ASP SEQRES 9 A 158 VAL ASN ARG LYS LEU SER ASP VAL TRP LYS GLU LEU SER SEQRES 10 A 158 LEU LEU LEU GLN VAL GLU GLN ARG MET PRO VAL SER PRO SEQRES 11 A 158 ILE SER GLN GLY ALA SER TRP ALA GLN GLU ASP GLN GLN SEQRES 12 A 158 ASP ALA ASP GLU ASP ARG ARG ALA PHE GLN MET LEU ARG SEQRES 13 A 158 ARG ASP SEQRES 1 B 97 GLY ALA MET GLY SER VAL SER SER VAL PRO THR LYS LEU SEQRES 2 B 97 GLU VAL VAL ALA ALA THR PRO THR SER LEU LEU ILE SER SEQRES 3 B 97 TRP ASP ALA ASP THR TYR TYR ILE TRP TYR TYR ARG ILE SEQRES 4 B 97 THR TYR GLY GLU THR GLY GLY ASN SER PRO VAL GLN GLU SEQRES 5 B 97 PHE THR VAL PRO GLY SER SER SER THR ALA THR ILE SER SEQRES 6 B 97 GLY LEU SER PRO GLY VAL ASP TYR THR ILE THR VAL TYR SEQRES 7 B 97 ALA PHE SER ASP TYR TYR GLY TYR SER SER SER PRO ILE SEQRES 8 B 97 SER ILE ASN TYR ARG THR HET ZN A 201 1 HET ZN A 202 1 HET ZN A 203 1 HET ZN B 101 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *14(H2 O) HELIX 1 AA1 SER A 1 MET A 21 1 21 HELIX 2 AA2 CYS A 24 GLN A 48 1 25 HELIX 3 AA3 SER A 55 PHE A 79 1 25 HELIX 4 AA4 ASN A 81 THR A 90 1 10 HELIX 5 AA5 PHE A 98 GLU A 119 1 22 HELIX 6 AA6 SER A 132 MET A 150 1 19 HELIX 7 AA7 ASP B 30 ILE B 34 5 5 SHEET 1 AA1 3 THR B 11 ALA B 18 0 SHEET 2 AA1 3 LEU B 23 ASP B 28 -1 O ASP B 28 N THR B 11 SHEET 3 AA1 3 THR B 61 ILE B 64 -1 O ILE B 64 N LEU B 23 SHEET 1 AA2 4 VAL B 50 PRO B 56 0 SHEET 2 AA2 4 TYR B 36 GLU B 43 -1 N TYR B 37 O VAL B 55 SHEET 3 AA2 4 ASP B 72 PHE B 80 -1 O THR B 74 N GLY B 42 SHEET 4 AA2 4 ILE B 91 ARG B 96 -1 O TYR B 95 N TYR B 73 LINK ND1 HIS A 6 ZN ZN A 202 1555 4436 2.03 LINK NE2 HIS A 15 ZN ZN A 201 1555 1555 2.03 LINK OE1 GLU A 19 ZN ZN A 201 1555 1555 2.00 LINK NE2 HIS A 33 ZN ZN A 201 1555 1555 2.04 LINK OE2 GLU A 71 ZN ZN A 203 1555 1555 2.00 LINK SG CYS A 86 ZN ZN A 202 1555 1555 2.25 LINK NZ LYS A 104 ZN ZN A 203 1555 1555 2.15 LINK OD1 ASP A 107 ZN ZN B 101 1555 3445 2.00 LINK OD2 ASP A 107 ZN ZN B 101 1555 3445 2.00 LINK OE1 GLU A 111 ZN ZN B 101 1555 3445 1.99 LINK ZN ZN A 201 O HOH A 307 1555 1555 2.09 LINK ZN ZN A 202 O HOH A 301 1555 1555 2.09 LINK ZN ZN A 202 O HOH A 308 1555 4536 2.09 LINK ZN ZN A 203 OE1 GLU B 14 3455 1555 2.00 LINK ZN ZN A 203 OE2 GLU B 14 3455 1555 1.99 LINK ZN ZN A 203 O HOH B 206 1555 3445 2.09 LINK OD1 ASP B 72 ZN ZN B 101 1555 1555 2.01 LINK OD2 ASP B 72 ZN ZN B 101 1555 1555 2.00 LINK OD1 ASN B 94 ZN ZN B 101 1555 1555 2.03 SITE 1 AC1 4 HIS A 15 GLU A 19 HIS A 33 HOH A 307 SITE 1 AC2 4 HIS A 6 CYS A 86 HOH A 301 HOH A 308 SITE 1 AC3 4 GLU A 71 LYS A 104 GLU B 14 HOH B 206 SITE 1 AC4 4 ASP A 107 GLU A 111 ASP B 72 ASN B 94 CRYST1 58.294 59.418 68.043 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017154 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016830 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014697 0.00000