HEADER PLANT PROTEIN, TRANSFERASE 07-NOV-19 6UXK TITLE STRUCTURE OF SERINE HYDROXYMETHYLTRANSFERASE 8 FROM GLYCINE MAX TITLE 2 CULTIVAR FORREST COMPLEXED WITH PLP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE HYDROXYMETHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.1.2.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLYCINE MAX; SOURCE 3 ORGANISM_COMMON: SOYBEAN; SOURCE 4 ORGANISM_TAXID: 3847; SOURCE 5 GENE: SHMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FOLATE METABOLISM, METHYLTRANSFERASE, SOYBEAN CYST NEMATODE INFECTION KEYWDS 2 RESISTANCE, CYTOPLASMIC ENZYME, PLANT PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.A.KORASICK,J.J.TANNER,L.J.BEAMER REVDAT 5 15-NOV-23 6UXK 1 REMARK REVDAT 4 11-OCT-23 6UXK 1 REMARK REVDAT 3 25-MAR-20 6UXK 1 JRNL REVDAT 2 19-FEB-20 6UXK 1 JRNL REVDAT 1 12-FEB-20 6UXK 0 JRNL AUTH D.A.KORASICK,P.K.KANDOTH,J.J.TANNER,M.G.MITCHUM,L.J.BEAMER JRNL TITL IMPAIRED FOLATE BINDING OF SERINE HYDROXYMETHYLTRANSFERASE 8 JRNL TITL 2 FROM SOYBEAN UNDERLIES RESISTANCE TO THE SOYBEAN CYST JRNL TITL 3 NEMATODE. JRNL REF J.BIOL.CHEM. V. 295 3708 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32014996 JRNL DOI 10.1074/JBC.RA119.012256 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14-3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 54285 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 2626 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6960 - 5.6008 1.00 2896 189 0.1606 0.1967 REMARK 3 2 5.6008 - 4.4465 1.00 2835 142 0.1472 0.1673 REMARK 3 3 4.4465 - 3.8848 1.00 2747 159 0.1405 0.1821 REMARK 3 4 3.8848 - 3.5297 1.00 2771 130 0.1620 0.2020 REMARK 3 5 3.5297 - 3.2768 1.00 2729 134 0.2007 0.2764 REMARK 3 6 3.2768 - 3.0836 1.00 2773 134 0.1996 0.2040 REMARK 3 7 3.0836 - 2.9292 1.00 2740 125 0.2034 0.2982 REMARK 3 8 2.9292 - 2.8017 1.00 2707 147 0.1977 0.2902 REMARK 3 9 2.8017 - 2.6939 1.00 2751 121 0.2005 0.2636 REMARK 3 10 2.6939 - 2.6009 1.00 2745 112 0.2091 0.2896 REMARK 3 11 2.6009 - 2.5196 1.00 2696 147 0.2016 0.2784 REMARK 3 12 2.5196 - 2.4476 1.00 2696 134 0.1996 0.2380 REMARK 3 13 2.4476 - 2.3831 1.00 2745 139 0.1946 0.2379 REMARK 3 14 2.3831 - 2.3250 1.00 2666 133 0.2146 0.2575 REMARK 3 15 2.3250 - 2.2721 1.00 2731 133 0.2304 0.3160 REMARK 3 16 2.2721 - 2.2238 1.00 2677 154 0.2674 0.3194 REMARK 3 17 2.2238 - 2.1793 0.99 2668 126 0.2724 0.3207 REMARK 3 18 2.1793 - 2.1382 0.97 2635 132 0.2850 0.3343 REMARK 3 19 2.1382 - 2.1000 0.92 2451 135 0.2927 0.3317 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 0 THROUGH 470) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3791 -8.7561 30.3090 REMARK 3 T TENSOR REMARK 3 T11: 0.2737 T22: 0.3422 REMARK 3 T33: 0.2629 T12: -0.0359 REMARK 3 T13: 0.0410 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.6925 L22: 2.2619 REMARK 3 L33: 1.4910 L12: -0.1915 REMARK 3 L13: 0.2056 L23: 0.5001 REMARK 3 S TENSOR REMARK 3 S11: 0.0622 S12: -0.1883 S13: 0.0207 REMARK 3 S21: 0.2418 S22: -0.0426 S23: -0.0354 REMARK 3 S31: -0.0594 S32: -0.0317 S33: -0.0147 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 0 THROUGH 470) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6833 -30.3433 8.7225 REMARK 3 T TENSOR REMARK 3 T11: 0.2859 T22: 0.2783 REMARK 3 T33: 0.3428 T12: 0.0452 REMARK 3 T13: -0.0383 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 0.7503 L22: 1.4980 REMARK 3 L33: 2.2730 L12: 0.2168 REMARK 3 L13: -0.1878 L23: 0.4670 REMARK 3 S TENSOR REMARK 3 S11: 0.0605 S12: 0.0205 S13: -0.2011 REMARK 3 S21: -0.0638 S22: -0.0250 S23: -0.0475 REMARK 3 S31: 0.2405 S32: -0.0265 S33: -0.0370 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 0 THROUGH 249 OR REMARK 3 RESID 251 THROUGH 470)) REMARK 3 SELECTION : (CHAIN B AND (RESID 0 THROUGH 249 OR REMARK 3 RESID 251 THROUGH 326 OR (RESID 327 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 328 THROUGH 470)) REMARK 3 ATOM PAIRS NUMBER : 4296 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UXK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1000245302. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54674 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 47.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 2.82800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6UXH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.21 M TRIMETHYLAMINE N-OXIDE, 0.1 M REMARK 280 TRIS PH 8.5, 20% (W/V) PEG MME 2000, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.98500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.01500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.98500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.01500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 LYS A 264 REMARK 465 LYS A 265 REMARK 465 GLY A 266 REMARK 465 GLN A 267 REMARK 465 PRO A 268 REMARK 465 SER A 381 REMARK 465 ALA A 382 REMARK 465 LEU A 383 REMARK 465 ASP A 471 REMARK 465 SER B -1 REMARK 465 LYS B 264 REMARK 465 LYS B 265 REMARK 465 GLY B 266 REMARK 465 GLN B 267 REMARK 465 PRO B 268 REMARK 465 SER B 381 REMARK 465 ALA B 382 REMARK 465 LEU B 383 REMARK 465 ASP B 471 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 66 CG OD1 ND2 REMARK 470 TYR A 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 ARG A 130 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 ASN A 270 CG OD1 ND2 REMARK 470 LYS A 327 CG CD CE NZ REMARK 470 LYS A 362 CG CD CE NZ REMARK 470 LYS A 403 CG CD CE NZ REMARK 470 LEU A 418 CG CD1 CD2 REMARK 470 GLU A 421 CG CD OE1 OE2 REMARK 470 LEU A 429 CG CD1 CD2 REMARK 470 LYS A 431 CG CD CE NZ REMARK 470 LYS A 435 CG CD CE NZ REMARK 470 VAL A 438 CG1 CG2 REMARK 470 ASN A 439 CG OD1 ND2 REMARK 470 LYS A 441 CG CD CE NZ REMARK 470 GLU A 444 CG CD OE1 OE2 REMARK 470 LYS A 452 CG CD CE NZ REMARK 470 LEU A 456 CG CD1 CD2 REMARK 470 GLU A 466 CG CD OE1 OE2 REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 470 ASN B 66 CG OD1 ND2 REMARK 470 TYR B 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 73 CG CD OE1 OE2 REMARK 470 ARG B 130 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 233 CG CD OE1 OE2 REMARK 470 GLU B 269 CG CD OE1 OE2 REMARK 470 ASN B 270 CG OD1 ND2 REMARK 470 LYS B 362 CG CD CE NZ REMARK 470 LYS B 403 CG CD CE NZ REMARK 470 LEU B 418 CG CD1 CD2 REMARK 470 GLU B 421 CG CD OE1 OE2 REMARK 470 LEU B 429 CG CD1 CD2 REMARK 470 LYS B 431 CG CD CE NZ REMARK 470 LYS B 435 CG CD CE NZ REMARK 470 VAL B 438 CG1 CG2 REMARK 470 ASN B 439 CG OD1 ND2 REMARK 470 LYS B 441 CG CD CE NZ REMARK 470 GLU B 444 CG CD OE1 OE2 REMARK 470 LYS B 452 CG CD CE NZ REMARK 470 LEU B 456 CG CD1 CD2 REMARK 470 GLU B 466 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LLP A 244 -118.01 -95.59 REMARK 500 ASN A 343 -140.30 -135.90 REMARK 500 VAL A 401 -164.02 -112.09 REMARK 500 GLU A 466 -2.65 -176.68 REMARK 500 LLP B 244 -120.05 -94.45 REMARK 500 THR B 338 -0.21 67.54 REMARK 500 ASN B 343 -140.40 -137.32 REMARK 500 VAL B 401 -164.20 -111.22 REMARK 500 GLU B 466 -3.15 -176.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 601 DBREF 6UXK A 1 471 UNP K4FW35 K4FW35_SOYBN 1 471 DBREF 6UXK B 1 471 UNP K4FW35 K4FW35_SOYBN 1 471 SEQADV 6UXK SER A -1 UNP K4FW35 EXPRESSION TAG SEQADV 6UXK HIS A 0 UNP K4FW35 EXPRESSION TAG SEQADV 6UXK SER B -1 UNP K4FW35 EXPRESSION TAG SEQADV 6UXK HIS B 0 UNP K4FW35 EXPRESSION TAG SEQRES 1 A 473 SER HIS MET ASP PRO VAL SER VAL TRP GLY ASN THR PRO SEQRES 2 A 473 LEU ALA THR VAL ASP PRO GLU ILE HIS ASP LEU ILE GLU SEQRES 3 A 473 LYS GLU LYS ARG ARG GLN CYS ARG GLY ILE GLU LEU ILE SEQRES 4 A 473 ALA SER GLU ASN PHE THR SER PHE ALA VAL ILE GLU ALA SEQRES 5 A 473 LEU GLY SER ALA LEU THR ASN LYS TYR SER GLU GLY MET SEQRES 6 A 473 PRO GLY ASN ARG TYR TYR GLY GLY ASN GLU TYR ILE ASP SEQRES 7 A 473 GLN ILE GLU ASN LEU CYS ARG SER ARG ALA LEU GLN ALA SEQRES 8 A 473 PHE HIS LEU ASP ALA GLN SER TRP GLY VAL ASN VAL GLN SEQRES 9 A 473 PRO TYR SER GLY SER PRO ALA ASN PHE ALA ALA TYR THR SEQRES 10 A 473 ALA VAL LEU ASN PRO HIS ASP ARG ILE MET GLY LEU ASP SEQRES 11 A 473 LEU ARG SER GLY GLY HIS LEU THR HIS GLY TYR TYR THR SEQRES 12 A 473 SER GLY GLY LYS LYS ILE SER ALA THR SER ILE TYR PHE SEQRES 13 A 473 GLU SER LEU PRO TYR LYS VAL ASN SER THR THR GLY TYR SEQRES 14 A 473 ILE ASP TYR ASP ARG LEU GLU GLU LYS ALA LEU ASP PHE SEQRES 15 A 473 ARG PRO LYS LEU ILE ILE CYS GLY GLY SER ALA TYR PRO SEQRES 16 A 473 ARG ASP TRP ASP TYR LYS ARG PHE ARG GLU VAL ALA ASP SEQRES 17 A 473 LYS CYS GLY ALA LEU LEU LEU CYS ASP MET ALA HIS THR SEQRES 18 A 473 SER GLY LEU VAL ALA ALA GLN GLU VAL ASN SER PRO PHE SEQRES 19 A 473 GLU TYR CYS ASP ILE VAL THR THR THR THR HIS LLP SER SEQRES 20 A 473 LEU ARG GLY PRO ARG ALA GLY MET ILE PHE TYR ARG LYS SEQRES 21 A 473 GLY PRO LYS PRO PRO LYS LYS GLY GLN PRO GLU ASN ALA SEQRES 22 A 473 VAL TYR ASP PHE GLU ASP LYS ILE ASN PHE ALA VAL PHE SEQRES 23 A 473 PRO SER LEU GLN GLY GLY PRO HIS ASN HIS GLN ILE GLY SEQRES 24 A 473 ALA LEU ALA VAL ALA LEU LYS GLN ALA ALA SER PRO GLY SEQRES 25 A 473 PHE LYS ALA TYR ALA LYS GLN VAL LYS ALA ASN ALA VAL SEQRES 26 A 473 ALA LEU GLY LYS TYR LEU MET GLY LYS GLY TYR SER LEU SEQRES 27 A 473 VAL THR GLY GLY THR GLU ASN HIS LEU VAL LEU TRP ASP SEQRES 28 A 473 LEU ARG PRO LEU GLY LEU THR GLY TYR LYS VAL GLU LYS SEQRES 29 A 473 LEU CYS ASP LEU CYS ASN ILE THR VAL ASN LYS ASN ALA SEQRES 30 A 473 VAL PHE GLY ASP SER SER ALA LEU ALA PRO GLY GLY VAL SEQRES 31 A 473 ARG ILE GLY ALA PRO ALA MET THR SER ARG GLY LEU VAL SEQRES 32 A 473 GLU LYS ASP PHE GLU GLN ILE GLY GLU PHE LEU HIS ARG SEQRES 33 A 473 ALA VAL THR LEU THR LEU GLU ILE GLN LYS GLU HIS GLY SEQRES 34 A 473 LYS LEU LEU LYS ASP PHE ASN LYS GLY LEU VAL ASN ASN SEQRES 35 A 473 LYS ALA ILE GLU ASP LEU LYS ALA ASP VAL GLU LYS PHE SEQRES 36 A 473 SER ALA LEU PHE ASP MET PRO GLY PHE LEU VAL SER GLU SEQRES 37 A 473 MET LYS TYR LYS ASP SEQRES 1 B 473 SER HIS MET ASP PRO VAL SER VAL TRP GLY ASN THR PRO SEQRES 2 B 473 LEU ALA THR VAL ASP PRO GLU ILE HIS ASP LEU ILE GLU SEQRES 3 B 473 LYS GLU LYS ARG ARG GLN CYS ARG GLY ILE GLU LEU ILE SEQRES 4 B 473 ALA SER GLU ASN PHE THR SER PHE ALA VAL ILE GLU ALA SEQRES 5 B 473 LEU GLY SER ALA LEU THR ASN LYS TYR SER GLU GLY MET SEQRES 6 B 473 PRO GLY ASN ARG TYR TYR GLY GLY ASN GLU TYR ILE ASP SEQRES 7 B 473 GLN ILE GLU ASN LEU CYS ARG SER ARG ALA LEU GLN ALA SEQRES 8 B 473 PHE HIS LEU ASP ALA GLN SER TRP GLY VAL ASN VAL GLN SEQRES 9 B 473 PRO TYR SER GLY SER PRO ALA ASN PHE ALA ALA TYR THR SEQRES 10 B 473 ALA VAL LEU ASN PRO HIS ASP ARG ILE MET GLY LEU ASP SEQRES 11 B 473 LEU ARG SER GLY GLY HIS LEU THR HIS GLY TYR TYR THR SEQRES 12 B 473 SER GLY GLY LYS LYS ILE SER ALA THR SER ILE TYR PHE SEQRES 13 B 473 GLU SER LEU PRO TYR LYS VAL ASN SER THR THR GLY TYR SEQRES 14 B 473 ILE ASP TYR ASP ARG LEU GLU GLU LYS ALA LEU ASP PHE SEQRES 15 B 473 ARG PRO LYS LEU ILE ILE CYS GLY GLY SER ALA TYR PRO SEQRES 16 B 473 ARG ASP TRP ASP TYR LYS ARG PHE ARG GLU VAL ALA ASP SEQRES 17 B 473 LYS CYS GLY ALA LEU LEU LEU CYS ASP MET ALA HIS THR SEQRES 18 B 473 SER GLY LEU VAL ALA ALA GLN GLU VAL ASN SER PRO PHE SEQRES 19 B 473 GLU TYR CYS ASP ILE VAL THR THR THR THR HIS LLP SER SEQRES 20 B 473 LEU ARG GLY PRO ARG ALA GLY MET ILE PHE TYR ARG LYS SEQRES 21 B 473 GLY PRO LYS PRO PRO LYS LYS GLY GLN PRO GLU ASN ALA SEQRES 22 B 473 VAL TYR ASP PHE GLU ASP LYS ILE ASN PHE ALA VAL PHE SEQRES 23 B 473 PRO SER LEU GLN GLY GLY PRO HIS ASN HIS GLN ILE GLY SEQRES 24 B 473 ALA LEU ALA VAL ALA LEU LYS GLN ALA ALA SER PRO GLY SEQRES 25 B 473 PHE LYS ALA TYR ALA LYS GLN VAL LYS ALA ASN ALA VAL SEQRES 26 B 473 ALA LEU GLY LYS TYR LEU MET GLY LYS GLY TYR SER LEU SEQRES 27 B 473 VAL THR GLY GLY THR GLU ASN HIS LEU VAL LEU TRP ASP SEQRES 28 B 473 LEU ARG PRO LEU GLY LEU THR GLY TYR LYS VAL GLU LYS SEQRES 29 B 473 LEU CYS ASP LEU CYS ASN ILE THR VAL ASN LYS ASN ALA SEQRES 30 B 473 VAL PHE GLY ASP SER SER ALA LEU ALA PRO GLY GLY VAL SEQRES 31 B 473 ARG ILE GLY ALA PRO ALA MET THR SER ARG GLY LEU VAL SEQRES 32 B 473 GLU LYS ASP PHE GLU GLN ILE GLY GLU PHE LEU HIS ARG SEQRES 33 B 473 ALA VAL THR LEU THR LEU GLU ILE GLN LYS GLU HIS GLY SEQRES 34 B 473 LYS LEU LEU LYS ASP PHE ASN LYS GLY LEU VAL ASN ASN SEQRES 35 B 473 LYS ALA ILE GLU ASP LEU LYS ALA ASP VAL GLU LYS PHE SEQRES 36 B 473 SER ALA LEU PHE ASP MET PRO GLY PHE LEU VAL SER GLU SEQRES 37 B 473 MET LYS TYR LYS ASP MODRES 6UXK LLP A 244 LYS MODIFIED RESIDUE MODRES 6UXK LLP B 244 LYS MODIFIED RESIDUE HET LLP A 244 24 HET LLP B 244 24 HET EDO A 501 4 HET EDO B 601 4 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *196(H2 O) HELIX 1 AA1 PRO A 3 ASN A 9 1 7 HELIX 2 AA2 PRO A 11 ASP A 16 1 6 HELIX 3 AA3 ASP A 16 ARG A 32 1 17 HELIX 4 AA4 SER A 44 GLY A 52 1 9 HELIX 5 AA5 SER A 53 LYS A 58 5 6 HELIX 6 AA6 ASN A 72 PHE A 90 1 19 HELIX 7 AA7 SER A 105 LEU A 118 1 14 HELIX 8 AA8 LEU A 129 GLY A 132 5 4 HELIX 9 AA9 HIS A 134 GLY A 138 5 5 HELIX 10 AB1 SER A 148 PHE A 154 1 7 HELIX 11 AB2 ASP A 169 ARG A 181 1 13 HELIX 12 AB3 ASP A 197 GLY A 209 1 13 HELIX 13 AB4 THR A 219 ALA A 225 1 7 HELIX 14 AB5 SER A 230 TYR A 234 5 5 HELIX 15 AB6 PHE A 275 PHE A 284 1 10 HELIX 16 AB7 HIS A 292 ALA A 307 1 16 HELIX 17 AB8 SER A 308 LYS A 332 1 25 HELIX 18 AB9 THR A 338 GLY A 340 5 3 HELIX 19 AC1 ARG A 351 GLY A 354 5 4 HELIX 20 AC2 THR A 356 CYS A 367 1 12 HELIX 21 AC3 ALA A 392 ARG A 398 1 7 HELIX 22 AC4 VAL A 401 GLY A 427 1 27 HELIX 23 AC5 LEU A 429 GLY A 436 1 8 HELIX 24 AC6 ASN A 440 LEU A 456 1 17 HELIX 25 AC7 PRO B 3 ASN B 9 1 7 HELIX 26 AC8 PRO B 11 ASP B 16 1 6 HELIX 27 AC9 ASP B 16 ARG B 32 1 17 HELIX 28 AD1 SER B 44 GLY B 52 1 9 HELIX 29 AD2 SER B 53 LYS B 58 5 6 HELIX 30 AD3 ASN B 72 PHE B 90 1 19 HELIX 31 AD4 SER B 105 LEU B 118 1 14 HELIX 32 AD5 LEU B 129 GLY B 132 5 4 HELIX 33 AD6 HIS B 134 GLY B 138 5 5 HELIX 34 AD7 SER B 148 PHE B 154 1 7 HELIX 35 AD8 ASP B 169 ARG B 181 1 13 HELIX 36 AD9 ASP B 197 GLY B 209 1 13 HELIX 37 AE1 THR B 219 ALA B 225 1 7 HELIX 38 AE2 SER B 230 TYR B 234 5 5 HELIX 39 AE3 ASP B 274 PHE B 284 1 11 HELIX 40 AE4 HIS B 292 ALA B 307 1 16 HELIX 41 AE5 SER B 308 LYS B 332 1 25 HELIX 42 AE6 LEU B 336 GLY B 340 5 5 HELIX 43 AE7 ARG B 351 GLY B 354 5 4 HELIX 44 AE8 THR B 356 CYS B 367 1 12 HELIX 45 AE9 ALA B 392 ARG B 398 1 7 HELIX 46 AF1 VAL B 401 GLY B 427 1 27 HELIX 47 AF2 LEU B 429 GLY B 436 1 8 HELIX 48 AF3 ASN B 440 LEU B 456 1 17 SHEET 1 AA1 2 ILE A 34 GLU A 35 0 SHEET 2 AA1 2 ILE A 369 THR A 370 1 O THR A 370 N ILE A 34 SHEET 1 AA2 2 GLY A 62 MET A 63 0 SHEET 2 AA2 2 ASN A 66 ARG A 67 -1 O ASN A 66 N MET A 63 SHEET 1 AA3 7 TRP A 97 ASN A 100 0 SHEET 2 AA3 7 GLY A 252 ARG A 257 -1 O TYR A 256 N GLY A 98 SHEET 3 AA3 7 ILE A 237 THR A 241 -1 N VAL A 238 O PHE A 255 SHEET 4 AA3 7 LEU A 211 ASP A 215 1 N CYS A 214 O THR A 239 SHEET 5 AA3 7 LEU A 184 CYS A 187 1 N CYS A 187 O ASP A 215 SHEET 6 AA3 7 ARG A 123 LEU A 127 1 N MET A 125 O ILE A 186 SHEET 7 AA3 7 GLU A 155 TYR A 159 1 O GLU A 155 N ILE A 124 SHEET 1 AA4 4 SER A 335 LEU A 336 0 SHEET 2 AA4 4 LEU A 345 ASP A 349 -1 O ASP A 349 N SER A 335 SHEET 3 AA4 4 GLY A 387 GLY A 391 -1 O ILE A 390 N VAL A 346 SHEET 4 AA4 4 ASN A 372 ASN A 374 -1 N ASN A 372 O ARG A 389 SHEET 1 AA5 2 ILE B 34 GLU B 35 0 SHEET 2 AA5 2 ILE B 369 THR B 370 1 O THR B 370 N ILE B 34 SHEET 1 AA6 2 GLY B 62 MET B 63 0 SHEET 2 AA6 2 ASN B 66 ARG B 67 -1 O ASN B 66 N MET B 63 SHEET 1 AA7 7 TRP B 97 ASN B 100 0 SHEET 2 AA7 7 GLY B 252 ARG B 257 -1 O TYR B 256 N GLY B 98 SHEET 3 AA7 7 ILE B 237 THR B 241 -1 N VAL B 238 O PHE B 255 SHEET 4 AA7 7 LEU B 211 ASP B 215 1 N CYS B 214 O THR B 239 SHEET 5 AA7 7 LEU B 184 CYS B 187 1 N CYS B 187 O ASP B 215 SHEET 6 AA7 7 ARG B 123 LEU B 127 1 N MET B 125 O ILE B 186 SHEET 7 AA7 7 GLU B 155 TYR B 159 1 O GLU B 155 N ILE B 124 SHEET 1 AA8 3 LEU B 345 ASP B 349 0 SHEET 2 AA8 3 GLY B 387 GLY B 391 -1 O ILE B 390 N VAL B 346 SHEET 3 AA8 3 ASN B 372 ASN B 374 -1 N ASN B 372 O ARG B 389 LINK C HIS A 243 N LLP A 244 1555 1555 1.33 LINK C LLP A 244 N SER A 245 1555 1555 1.33 LINK C HIS B 243 N LLP B 244 1555 1555 1.32 LINK C LLP B 244 N SER B 245 1555 1555 1.33 CISPEP 1 PHE A 284 PRO A 285 0 13.62 CISPEP 2 PHE B 284 PRO B 285 0 12.92 SITE 1 AC1 5 GLY A 52 HOH A 617 HOH A 636 GLY B 52 SITE 2 AC1 5 HOH B 717 SITE 1 AC2 2 PHE A 111 PHE B 111 CRYST1 56.120 127.970 128.030 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017819 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007814 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007811 0.00000