HEADER UNKNOWN FUNCTION 18-NOV-19 6V04 TITLE DYNU16 CRYSTAL STRUCTURE, A PUTATIVE PROTEIN IN THE DYNEMICIN TITLE 2 BIOSYNTHETIC LOCUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED SRPBCC DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MICROMONOSPORA CHERSINA; SOURCE 3 ORGANISM_TAXID: 47854; SOURCE 4 GENE: GA0070603_4194; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DYNEMICIN, START DOMAIN, SRPBCC DOMAIN, CYCLASE/AROMATASE, UNKNOWN KEYWDS 2 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR S.K.ALVARADO,M.D.MILLER,M.BHARDWAJ,J.S.THORSON,S.G.VAN LANEN, AUTHOR 2 G.N.PHILLIPS JR. REVDAT 4 06-APR-22 6V04 1 JRNL REVDAT 3 15-SEP-21 6V04 1 AUTHOR JRNL REVDAT 2 28-APR-21 6V04 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 SEQADV SEQRES HELIX SHEET REVDAT 2 3 1 LINK ATOM REVDAT 1 18-NOV-20 6V04 0 JRNL AUTH S.K.ALVARADO,M.D.MILLER,M.BHARDWAJ,J.S.THORSON, JRNL AUTH 2 S.G.VAN LANEN,G.N.PHILLIPS JR. JRNL TITL STRUCTURAL CHARACTERIZATION OF DYNU16, A START/BET V1-LIKE JRNL TITL 2 PROTEIN INVOLVED IN DYNEMICIN BIOSYNTHESIS. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 77 328 2021 JRNL REFN ESSN 2053-230X JRNL PMID 34605436 JRNL DOI 10.1107/S2053230X21008943 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 58774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.550 REMARK 3 FREE R VALUE TEST SET COUNT : 2087 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.6100 - 3.7100 0.99 4185 150 0.1620 0.1912 REMARK 3 2 3.7100 - 2.9400 1.00 4022 147 0.1569 0.2035 REMARK 3 3 2.9400 - 2.5700 1.00 4003 148 0.1609 0.1747 REMARK 3 4 2.5700 - 2.3400 1.00 3992 147 0.1610 0.1738 REMARK 3 5 2.3400 - 2.1700 1.00 3953 141 0.1482 0.1538 REMARK 3 6 2.1700 - 2.0400 1.00 3965 144 0.1523 0.1901 REMARK 3 7 2.0400 - 1.9400 1.00 3932 147 0.1536 0.1760 REMARK 3 8 1.9400 - 1.8500 1.00 3934 144 0.1613 0.1795 REMARK 3 9 1.8500 - 1.7800 1.00 3913 146 0.1710 0.1873 REMARK 3 10 1.7800 - 1.7200 1.00 3928 144 0.1730 0.1725 REMARK 3 11 1.7200 - 1.6700 0.99 3856 143 0.1885 0.2263 REMARK 3 12 1.6700 - 1.6200 0.98 3899 144 0.1964 0.1934 REMARK 3 13 1.6200 - 1.5800 0.95 3728 137 0.2115 0.2426 REMARK 3 14 1.5800 - 1.5400 0.83 3243 126 0.2339 0.2301 REMARK 3 15 1.5400 - 1.5000 0.55 2134 79 0.2767 0.3284 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2269 REMARK 3 ANGLE : 0.831 3108 REMARK 3 CHIRALITY : 0.053 325 REMARK 3 PLANARITY : 0.006 416 REMARK 3 DIHEDRAL : 19.096 818 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4296 30.7076 27.1665 REMARK 3 T TENSOR REMARK 3 T11: 0.4571 T22: 0.4382 REMARK 3 T33: 0.4054 T12: -0.0388 REMARK 3 T13: -0.0188 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 0.1835 L22: 0.3428 REMARK 3 L33: 0.2682 L12: 0.0316 REMARK 3 L13: -0.2089 L23: -0.0586 REMARK 3 S TENSOR REMARK 3 S11: 0.2563 S12: -0.6630 S13: 0.8172 REMARK 3 S21: 0.2885 S22: -0.0959 S23: -0.2719 REMARK 3 S31: -0.7437 S32: 0.2698 S33: 0.0017 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6022 29.6062 21.1735 REMARK 3 T TENSOR REMARK 3 T11: 0.3955 T22: 0.6776 REMARK 3 T33: 0.3904 T12: 0.1031 REMARK 3 T13: -0.0130 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.1173 L22: 0.2173 REMARK 3 L33: 0.0598 L12: -0.1148 REMARK 3 L13: 0.0113 L23: -0.0118 REMARK 3 S TENSOR REMARK 3 S11: 0.5562 S12: -0.0085 S13: -0.0679 REMARK 3 S21: 0.4948 S22: -0.1765 S23: -0.1094 REMARK 3 S31: -0.2559 S32: -0.8390 S33: 0.0012 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7026 17.7935 14.3653 REMARK 3 T TENSOR REMARK 3 T11: 0.2744 T22: 0.5850 REMARK 3 T33: 0.3036 T12: -0.1241 REMARK 3 T13: -0.0286 T23: 0.0610 REMARK 3 L TENSOR REMARK 3 L11: 1.0370 L22: 0.4180 REMARK 3 L33: 0.1871 L12: -0.6113 REMARK 3 L13: 0.4109 L23: -0.2802 REMARK 3 S TENSOR REMARK 3 S11: -0.0819 S12: 0.2317 S13: -0.4834 REMARK 3 S21: 0.0923 S22: 0.1724 S23: 0.2721 REMARK 3 S31: 0.6601 S32: -1.5726 S33: 0.0799 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1396 17.6182 11.0089 REMARK 3 T TENSOR REMARK 3 T11: 0.3082 T22: 0.2392 REMARK 3 T33: 0.2683 T12: -0.0767 REMARK 3 T13: -0.0332 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.0579 L22: 0.7895 REMARK 3 L33: 2.2553 L12: 0.3199 REMARK 3 L13: -0.1126 L23: -0.1079 REMARK 3 S TENSOR REMARK 3 S11: 0.0296 S12: 0.0047 S13: -0.2066 REMARK 3 S21: -0.0241 S22: -0.0085 S23: 0.0078 REMARK 3 S31: 0.4757 S32: -0.2706 S33: -0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8420 13.4680 24.2973 REMARK 3 T TENSOR REMARK 3 T11: 0.4366 T22: 0.5327 REMARK 3 T33: 0.4086 T12: -0.1577 REMARK 3 T13: -0.0241 T23: 0.1160 REMARK 3 L TENSOR REMARK 3 L11: 0.3145 L22: 3.9810 REMARK 3 L33: 0.2150 L12: -0.7372 REMARK 3 L13: -0.1828 L23: 0.9231 REMARK 3 S TENSOR REMARK 3 S11: 0.2992 S12: -0.8520 S13: -0.3028 REMARK 3 S21: 1.4393 S22: 0.0334 S23: 0.4521 REMARK 3 S31: 0.7338 S32: -1.1916 S33: 0.1227 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9807 21.6682 19.7359 REMARK 3 T TENSOR REMARK 3 T11: 0.2517 T22: 0.2450 REMARK 3 T33: 0.2579 T12: -0.0541 REMARK 3 T13: -0.0269 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 1.1036 L22: 1.0405 REMARK 3 L33: 3.0735 L12: 0.4413 REMARK 3 L13: 0.4405 L23: -1.4107 REMARK 3 S TENSOR REMARK 3 S11: 0.0476 S12: -0.4012 S13: -0.1287 REMARK 3 S21: 0.1483 S22: 0.0041 S23: 0.0980 REMARK 3 S31: 0.0624 S32: -0.2592 S33: 0.0268 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8127 26.9874 23.6253 REMARK 3 T TENSOR REMARK 3 T11: 0.3092 T22: 0.2839 REMARK 3 T33: 0.2684 T12: -0.0286 REMARK 3 T13: 0.0008 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.2806 L22: 1.2787 REMARK 3 L33: 2.5518 L12: -0.3439 REMARK 3 L13: -0.4231 L23: -0.7289 REMARK 3 S TENSOR REMARK 3 S11: 0.2479 S12: -0.0868 S13: 0.5317 REMARK 3 S21: 0.2701 S22: -0.0350 S23: -0.1989 REMARK 3 S31: -0.3887 S32: -0.0885 S33: 0.0004 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9397 35.3157 19.4737 REMARK 3 T TENSOR REMARK 3 T11: 0.5094 T22: 0.3643 REMARK 3 T33: 0.3506 T12: -0.1024 REMARK 3 T13: -0.0694 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 0.2532 L22: 0.4017 REMARK 3 L33: 0.2370 L12: 0.1048 REMARK 3 L13: 0.2412 L23: 0.0484 REMARK 3 S TENSOR REMARK 3 S11: 0.2651 S12: -0.1106 S13: -0.1483 REMARK 3 S21: -0.0261 S22: -0.1030 S23: -0.4344 REMARK 3 S31: -0.3983 S32: 0.3958 S33: 0.0064 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9559 30.8540 14.1461 REMARK 3 T TENSOR REMARK 3 T11: 0.3246 T22: 0.3818 REMARK 3 T33: 0.2789 T12: 0.0079 REMARK 3 T13: -0.0150 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 0.2107 L22: 0.0142 REMARK 3 L33: 0.0500 L12: -0.0493 REMARK 3 L13: 0.0872 L23: -0.0277 REMARK 3 S TENSOR REMARK 3 S11: -0.3393 S12: 0.1113 S13: 0.1279 REMARK 3 S21: -0.0193 S22: 0.2019 S23: -0.0895 REMARK 3 S31: -0.6364 S32: -0.3209 S33: -0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4056 28.3481 7.6211 REMARK 3 T TENSOR REMARK 3 T11: 0.2772 T22: 0.6522 REMARK 3 T33: 0.2921 T12: 0.0099 REMARK 3 T13: -0.0376 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 0.5097 L22: 0.8782 REMARK 3 L33: 5.3502 L12: 0.4492 REMARK 3 L13: -0.7305 L23: 0.7966 REMARK 3 S TENSOR REMARK 3 S11: 0.1058 S12: 0.0053 S13: 0.1587 REMARK 3 S21: -0.2816 S22: 0.1467 S23: 0.6226 REMARK 3 S31: -0.6909 S32: -1.1145 S33: 0.0672 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4155 30.5329 9.8417 REMARK 3 T TENSOR REMARK 3 T11: 0.2475 T22: 0.2878 REMARK 3 T33: 0.2474 T12: -0.0223 REMARK 3 T13: -0.0265 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.2502 L22: 1.1338 REMARK 3 L33: 1.3895 L12: 0.1448 REMARK 3 L13: -0.0708 L23: -0.2733 REMARK 3 S TENSOR REMARK 3 S11: 0.0897 S12: -0.3662 S13: -0.0458 REMARK 3 S21: 0.0684 S22: -0.0723 S23: -0.1090 REMARK 3 S31: -0.0170 S32: 0.0173 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.2271 34.1142 3.5093 REMARK 3 T TENSOR REMARK 3 T11: 0.2575 T22: 0.4372 REMARK 3 T33: 0.3637 T12: -0.0668 REMARK 3 T13: -0.0027 T23: 0.0348 REMARK 3 L TENSOR REMARK 3 L11: 1.1379 L22: 0.5382 REMARK 3 L33: 0.7199 L12: 0.2547 REMARK 3 L13: 0.8130 L23: 0.4420 REMARK 3 S TENSOR REMARK 3 S11: -0.0833 S12: 0.5100 S13: 0.1695 REMARK 3 S21: -0.1680 S22: -0.0076 S23: -0.5146 REMARK 3 S31: -0.3550 S32: 0.7308 S33: 0.0002 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7595 32.7074 -7.3793 REMARK 3 T TENSOR REMARK 3 T11: 0.3214 T22: 0.3163 REMARK 3 T33: 0.3153 T12: -0.0282 REMARK 3 T13: 0.0060 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.6894 L22: 2.3264 REMARK 3 L33: 2.4494 L12: -0.8059 REMARK 3 L13: -1.4864 L23: -0.7858 REMARK 3 S TENSOR REMARK 3 S11: -0.1177 S12: 0.1456 S13: -0.3240 REMARK 3 S21: -0.4551 S22: -0.0282 S23: 0.0275 REMARK 3 S31: 0.2010 S32: 0.1066 S33: 0.0003 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.7366 44.0293 2.6049 REMARK 3 T TENSOR REMARK 3 T11: 0.3404 T22: 0.3164 REMARK 3 T33: 0.3290 T12: -0.1478 REMARK 3 T13: 0.0090 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.1738 L22: 2.7836 REMARK 3 L33: 0.8966 L12: -1.8804 REMARK 3 L13: -0.5198 L23: 1.3944 REMARK 3 S TENSOR REMARK 3 S11: 0.1152 S12: 0.2099 S13: 0.7277 REMARK 3 S21: -0.1553 S22: -0.4925 S23: -0.3421 REMARK 3 S31: -0.9220 S32: 0.7593 S33: -0.0767 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5675 41.5861 2.7941 REMARK 3 T TENSOR REMARK 3 T11: 0.2583 T22: 0.2279 REMARK 3 T33: 0.2532 T12: -0.0738 REMARK 3 T13: 0.0210 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.4769 L22: 0.8287 REMARK 3 L33: 0.8631 L12: -0.2232 REMARK 3 L13: -0.9391 L23: 0.6229 REMARK 3 S TENSOR REMARK 3 S11: 0.1131 S12: 0.0091 S13: 0.2421 REMARK 3 S21: 0.0363 S22: -0.1212 S23: -0.1379 REMARK 3 S31: -0.3805 S32: 0.1809 S33: -0.0002 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.8570 38.2658 12.1568 REMARK 3 T TENSOR REMARK 3 T11: 0.3283 T22: 0.3407 REMARK 3 T33: 0.3276 T12: -0.0567 REMARK 3 T13: -0.0289 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.3244 L22: 0.7040 REMARK 3 L33: 5.3755 L12: 0.9175 REMARK 3 L13: -0.3168 L23: -0.8233 REMARK 3 S TENSOR REMARK 3 S11: 0.0566 S12: -0.2524 S13: 0.8047 REMARK 3 S21: 0.4194 S22: 0.2136 S23: 0.2408 REMARK 3 S31: -1.0571 S32: -0.5424 S33: 0.1836 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.9041 30.6583 24.3770 REMARK 3 T TENSOR REMARK 3 T11: 0.3612 T22: 0.5546 REMARK 3 T33: 0.2888 T12: -0.1492 REMARK 3 T13: -0.0717 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 1.5136 L22: 3.5703 REMARK 3 L33: 3.8238 L12: 0.7503 REMARK 3 L13: -0.5670 L23: -2.8955 REMARK 3 S TENSOR REMARK 3 S11: 0.3452 S12: -1.1330 S13: -0.1666 REMARK 3 S21: 0.7257 S22: -0.1432 S23: 0.5640 REMARK 3 S31: -0.6837 S32: -0.1555 S33: 0.1479 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 235 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.6306 37.2155 6.9744 REMARK 3 T TENSOR REMARK 3 T11: 0.2895 T22: 0.2475 REMARK 3 T33: 0.2466 T12: -0.0441 REMARK 3 T13: -0.0169 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.8870 L22: 0.5126 REMARK 3 L33: 0.7507 L12: 0.3555 REMARK 3 L13: -0.6404 L23: -0.5873 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: -0.1474 S13: 0.2166 REMARK 3 S21: 0.3367 S22: -0.1550 S23: -0.1712 REMARK 3 S31: -0.5232 S32: 0.0507 S33: -0.0054 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 248 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5349 31.0686 -1.4471 REMARK 3 T TENSOR REMARK 3 T11: 0.1995 T22: 0.1983 REMARK 3 T33: 0.2060 T12: -0.0146 REMARK 3 T13: 0.0023 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 1.4285 L22: 1.2933 REMARK 3 L33: 1.0603 L12: 0.2942 REMARK 3 L13: -0.8669 L23: -0.0901 REMARK 3 S TENSOR REMARK 3 S11: 0.1111 S12: 0.2988 S13: -0.1447 REMARK 3 S21: -0.1239 S22: -0.0259 S23: 0.0837 REMARK 3 S31: 0.0618 S32: -0.0025 S33: 0.0000 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 274 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.7650 21.2268 11.5878 REMARK 3 T TENSOR REMARK 3 T11: 0.4329 T22: 0.3749 REMARK 3 T33: 0.6128 T12: -0.0281 REMARK 3 T13: -0.0777 T23: 0.1170 REMARK 3 L TENSOR REMARK 3 L11: 0.7643 L22: 0.3396 REMARK 3 L33: 0.5668 L12: 0.5004 REMARK 3 L13: 0.3304 L23: 0.2863 REMARK 3 S TENSOR REMARK 3 S11: 0.3084 S12: -0.3486 S13: -2.0590 REMARK 3 S21: 0.0335 S22: 0.1099 S23: -0.0581 REMARK 3 S31: 1.8691 S32: -0.2572 S33: 0.0471 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V04 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1000245533. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOV 11, 2017, XIA2 REMARK 200 DATA SCALING SOFTWARE : XDS NOV 11, 2017 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 112506 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 44.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 8.974 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.64 REMARK 200 R MERGE FOR SHELL (I) : 0.71500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHELX 2016/1, HKL2MAP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1UL:1UL, 0.1M TRIS-HCL PH8.5, 0.2M REMARK 280 MGCL2, 20% PEG 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.31467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 82.62933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 82.62933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 41.31467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 614 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 629 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 4 REMARK 465 TYR A 5 REMARK 465 LEU A 6 REMARK 465 LYS A 7 REMARK 465 LEU A 8 REMARK 465 THR A 278 REMARK 465 ARG A 279 REMARK 465 GLN A 280 REMARK 465 GLU A 281 REMARK 465 LEU A 282 REMARK 465 PRO A 283 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 9 N CB CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 450 O HOH A 618 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 653 O HOH A 662 6765 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 20 45.80 -85.68 REMARK 500 ASP A 74 -69.54 -135.76 REMARK 500 LEU A 83 16.23 59.54 REMARK 500 LEU A 164 63.61 -110.07 REMARK 500 ARG A 207 -60.03 -132.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 145 OD1 REMARK 620 2 ASP A 145 OD1 0.0 REMARK 620 3 HOH A 429 O 85.7 85.7 REMARK 620 4 HOH A 429 O 97.6 97.6 175.8 REMARK 620 5 HOH A 527 O 84.4 84.4 91.3 86.4 REMARK 620 6 HOH A 527 O 160.6 160.6 86.3 91.3 113.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 148 OE1 REMARK 620 2 GLU A 254 OE1 68.8 REMARK 620 3 HOH A 419 O 92.3 100.4 REMARK 620 4 HOH A 467 O 83.5 73.7 173.7 REMARK 620 5 HOH A 482 O 86.6 153.7 89.3 95.1 REMARK 620 6 HOH A 487 O 90.0 24.4 88.1 87.2 175.6 REMARK 620 N 1 2 3 4 5 DBREF 6V04 A 1 283 UNP B2BM46 B2BM46_9ACTN 1 283 SEQADV 6V04 SER A 0 UNP B2BM46 EXPRESSION TAG SEQRES 1 A 284 SER MET PRO ASP GLY TYR LEU LYS LEU PRO ASP ASP TRP SEQRES 2 A 284 VAL ARG VAL MET VAL SER VAL PRO ALA PRO VAL ASP GLU SEQRES 3 A 284 VAL TRP GLU ALA VAL THR ASP PRO ARG ARG VAL ALA GLN SEQRES 4 A 284 TRP PHE GLY HIS LEU SER ALA PRO MET THR THR GLY ALA SEQRES 5 A 284 SER THR ARG VAL ASP PHE GLY ASP GLY ASP PHE PHE ASP SEQRES 6 A 284 ILE GLU VAL ASP HIS VAL GLU PRO ARG ASP ARG LEU LEU SEQRES 7 A 284 PHE ARG TRP SER PHE LEU GLY VAL GLY PRO GLU CYS GLN SEQRES 8 A 284 VAL GLY TRP THR LEU THR GLY GLY ALA GLU ALA THR THR SEQRES 9 A 284 LEU THR VAL ASP ASP SER CYS PRO GLY ARG PRO GLY SER SEQRES 10 A 284 GLU VAL ALA GLN LEU LYS ALA GLY TRP LEU ASP PHE VAL SEQRES 11 A 284 GLY ARG LEU ALA ARG TYR LEU GLU THR GLY LYS PRO SER SEQRES 12 A 284 ARG TYR ASP TRP ARG GLN GLU ILE ASP GLY SER VAL VAL SEQRES 13 A 284 LEU PRO ASN GLY SER TRP HIS PRO LEU ARG GLU GLU THR SEQRES 14 A 284 VAL VAL ASP TRP LEU PRO ILE ALA THR ASN GLY ALA GLY SEQRES 15 A 284 PRO GLY TRP PHE PHE VAL VAL ASP GLU GLU GLY PRO ARG SEQRES 16 A 284 ARG PHE THR LEU ARG ASP TRP GLN LEU ASP ARG GLU ARG SEQRES 17 A 284 ALA LEU THR PHE ALA VAL GLU ILE PRO GLY ALA ARG THR SEQRES 18 A 284 VAL THR ALA CYS GLN VAL ARG THR GLU PRO GLY GLU ARG SEQRES 19 A 284 GLY ARG THR LEU SER VAL SER HIS GLN GLY TRP HIS ARG SEQRES 20 A 284 LEU GLY LEU SER ASP LEU GLN GLU ARG THR LEU ARG HIS SEQRES 21 A 284 ARG PHE ALA ALA THR TRP THR ALA ALA LEU SER LEU ALA SEQRES 22 A 284 GLU GLU CYS ALA ARG THR ARG GLN GLU LEU PRO HET NA A 301 1 HET MG A 302 1 HET CL A 303 1 HET CL A 304 1 HET CL A 305 1 HETNAM NA SODIUM ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 2 NA NA 1+ FORMUL 3 MG MG 2+ FORMUL 4 CL 3(CL 1-) FORMUL 7 HOH *282(H2 O) HELIX 1 AA1 PRO A 22 ASP A 32 1 11 HELIX 2 AA2 ASP A 32 ALA A 37 1 6 HELIX 3 AA3 PRO A 114 GLY A 139 1 26 HELIX 4 AA4 THR A 168 LEU A 173 1 6 HELIX 5 AA5 GLY A 243 LEU A 247 5 5 HELIX 6 AA6 SER A 250 ARG A 277 1 28 SHEET 1 AA1 7 VAL A 13 VAL A 19 0 SHEET 2 AA1 7 THR A 102 SER A 109 -1 O VAL A 106 N VAL A 15 SHEET 3 AA1 7 CYS A 89 GLY A 97 -1 N THR A 96 O THR A 103 SHEET 4 AA1 7 ARG A 75 PHE A 82 -1 N PHE A 78 O VAL A 91 SHEET 5 AA1 7 PHE A 62 GLU A 71 -1 N GLU A 66 O ARG A 79 SHEET 6 AA1 7 SER A 52 ASP A 56 -1 N THR A 53 O ILE A 65 SHEET 7 AA1 7 HIS A 42 LEU A 43 -1 N HIS A 42 O ASP A 56 SHEET 1 AA2 7 ILE A 150 LEU A 156 0 SHEET 2 AA2 7 ARG A 235 GLN A 242 -1 O ARG A 235 N LEU A 156 SHEET 3 AA2 7 THR A 222 GLU A 229 -1 N ALA A 223 O GLN A 242 SHEET 4 AA2 7 ALA A 208 VAL A 213 -1 N PHE A 211 O CYS A 224 SHEET 5 AA2 7 ARG A 195 ASP A 204 -1 N ASP A 204 O ALA A 208 SHEET 6 AA2 7 PRO A 182 PHE A 186 -1 N PHE A 185 O PHE A 196 SHEET 7 AA2 7 ILE A 175 THR A 177 -1 N ALA A 176 O GLY A 183 LINK OD1 ASP A 145 NA NA A 301 1555 1555 2.37 LINK OD1 ASP A 145 NA NA A 301 1555 4555 2.37 LINK OE1 GLN A 148 MG MG A 302 1555 1555 2.05 LINK OE1 GLU A 254 MG MG A 302 1555 4555 2.04 LINK NA NA A 301 O HOH A 429 1555 1555 2.51 LINK NA NA A 301 O HOH A 429 1555 4555 2.51 LINK NA NA A 301 O HOH A 527 1555 1555 2.38 LINK NA NA A 301 O HOH A 527 1555 4555 2.38 LINK MG MG A 302 O HOH A 419 1555 4555 2.09 LINK MG MG A 302 O HOH A 467 1555 4555 2.02 LINK MG MG A 302 O HOH A 482 1555 4555 2.05 LINK MG MG A 302 O HOH A 487 1555 4555 2.04 CISPEP 1 GLY A 192 PRO A 193 0 -1.14 CRYST1 73.171 73.171 123.944 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013667 0.007890 0.000000 0.00000 SCALE2 0.000000 0.015781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008068 0.00000