HEADER IMMUNE SYSTEM 20-NOV-19 6V1A TITLE IMMUNE RECEPTOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MHC CLASS II ANTIGEN DRA; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-4 BETA CHAIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: MHC CLASS II ANTIGEN DRB1*4,DR4; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: FIBRINOGEN BETA 74CIT69-81; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: M134 TCR ALPHA CHAIN; COMPND 17 CHAIN: D; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: M134 TCR BETA CHAIN; COMPND 21 CHAIN: E; COMPND 22 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-DRA, HLA-DRA1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK 293S; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: HLA-DRB1; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 MOL_ID: 4; SOURCE 21 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 22 ORGANISM_TAXID: 10090; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 24 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 25 MOL_ID: 5; SOURCE 26 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 27 ORGANISM_TAXID: 10090; SOURCE 28 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 29 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS IMMUNE RECEPTOR, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.J.LIM,J.ROSSJOHN REVDAT 5 23-OCT-24 6V1A 1 REMARK REVDAT 4 15-NOV-23 6V1A 1 LINK ATOM REVDAT 3 11-OCT-23 6V1A 1 REMARK REVDAT 2 09-JUN-21 6V1A 1 JRNL REVDAT 1 25-NOV-20 6V1A 0 JRNL AUTH J.J.LIM,C.M.JONES,T.J.LOH,Y.T.TING,P.ZAREIE,K.L.LOH, JRNL AUTH 2 N.J.FELIX,A.SURI,M.MCKINNON,F.STEVENAERT,R.K.SHARMA, JRNL AUTH 3 L.KLARESKOG,V.MALMSTROM,D.G.BAKER,A.W.PURCELL,H.H.REID, JRNL AUTH 4 N.L.LA GRUTA,J.ROSSJOHN JRNL TITL THE SHARED SUSCEPTIBILITY EPITOPE OF HLA-DR4 BINDS JRNL TITL 2 CITRULLINATED SELF-ANTIGENS AND THE TCR. JRNL REF SCI IMMUNOL V. 6 2021 JRNL REFN ESSN 2470-9468 JRNL PMID 33863750 JRNL DOI 10.1126/SCIIMMUNOL.ABE0896 REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 49865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.925 REMARK 3 FREE R VALUE TEST SET COUNT : 2456 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.7200 - 5.9873 1.00 2771 153 0.1916 0.2013 REMARK 3 2 5.9873 - 4.7541 1.00 2652 178 0.1630 0.1887 REMARK 3 3 4.7541 - 4.1537 1.00 2682 149 0.1419 0.1626 REMARK 3 4 4.1537 - 3.7742 1.00 2675 104 0.1643 0.2078 REMARK 3 5 3.7742 - 3.5038 1.00 2705 136 0.1691 0.2066 REMARK 3 6 3.5038 - 3.2973 1.00 2637 149 0.1810 0.2129 REMARK 3 7 3.2973 - 3.1322 1.00 2620 150 0.1963 0.2157 REMARK 3 8 3.1322 - 2.9959 1.00 2666 125 0.1945 0.2355 REMARK 3 9 2.9959 - 2.8806 1.00 2671 129 0.2011 0.2032 REMARK 3 10 2.8806 - 2.7812 1.00 2650 125 0.2055 0.2455 REMARK 3 11 2.7812 - 2.6942 1.00 2646 136 0.2168 0.2822 REMARK 3 12 2.6942 - 2.6172 1.00 2649 130 0.2266 0.2623 REMARK 3 13 2.6172 - 2.5483 1.00 2657 138 0.2275 0.2468 REMARK 3 14 2.5483 - 2.4862 1.00 2583 155 0.2380 0.2674 REMARK 3 15 2.4862 - 2.4297 1.00 2666 124 0.2415 0.2784 REMARK 3 16 2.4297 - 2.3780 1.00 2628 116 0.2481 0.2736 REMARK 3 17 2.3780 - 2.3304 1.00 2651 148 0.2559 0.2789 REMARK 3 18 2.3304 - 2.2900 0.85 2200 111 0.2867 0.3150 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.253 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.539 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6772 REMARK 3 ANGLE : 0.639 9195 REMARK 3 CHIRALITY : 0.046 999 REMARK 3 PLANARITY : 0.006 1180 REMARK 3 DIHEDRAL : 21.448 2427 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1317 -13.1664 19.2956 REMARK 3 T TENSOR REMARK 3 T11: 0.4245 T22: 0.5598 REMARK 3 T33: 0.3642 T12: -0.1072 REMARK 3 T13: -0.0273 T23: -0.1099 REMARK 3 L TENSOR REMARK 3 L11: 4.0807 L22: 2.2096 REMARK 3 L33: 2.2714 L12: 1.1013 REMARK 3 L13: -0.5527 L23: -0.0717 REMARK 3 S TENSOR REMARK 3 S11: -0.1516 S12: 0.2514 S13: -0.0080 REMARK 3 S21: -0.3233 S22: 0.1159 S23: 0.2948 REMARK 3 S31: 0.5761 S32: -0.0841 S33: 0.0308 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9715 -17.7715 22.3965 REMARK 3 T TENSOR REMARK 3 T11: 0.4169 T22: 0.4649 REMARK 3 T33: 0.4600 T12: -0.0406 REMARK 3 T13: 0.0350 T23: -0.1171 REMARK 3 L TENSOR REMARK 3 L11: 3.0324 L22: 2.2824 REMARK 3 L33: 3.7873 L12: -0.1381 REMARK 3 L13: 0.2886 L23: 0.4212 REMARK 3 S TENSOR REMARK 3 S11: -0.1590 S12: 0.3894 S13: -0.6334 REMARK 3 S21: 0.0041 S22: 0.1572 S23: -0.1801 REMARK 3 S31: 0.6297 S32: 0.1289 S33: -0.0165 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9655 -20.7800 15.6324 REMARK 3 T TENSOR REMARK 3 T11: 0.5269 T22: 0.6571 REMARK 3 T33: 0.5063 T12: -0.1446 REMARK 3 T13: -0.0803 T23: -0.1410 REMARK 3 L TENSOR REMARK 3 L11: 0.8788 L22: 1.2745 REMARK 3 L33: 2.0587 L12: 0.1153 REMARK 3 L13: -0.2510 L23: 0.7688 REMARK 3 S TENSOR REMARK 3 S11: -0.0286 S12: 0.5271 S13: -0.3609 REMARK 3 S21: -0.2111 S22: -0.0053 S23: 0.1877 REMARK 3 S31: 0.4515 S32: -0.3853 S33: 0.0911 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4857 -28.6070 12.5453 REMARK 3 T TENSOR REMARK 3 T11: 0.6996 T22: 0.7930 REMARK 3 T33: 0.6146 T12: -0.1743 REMARK 3 T13: -0.0441 T23: -0.1943 REMARK 3 L TENSOR REMARK 3 L11: 0.9566 L22: 1.9524 REMARK 3 L33: 1.6730 L12: -0.2395 REMARK 3 L13: -0.4051 L23: 1.1915 REMARK 3 S TENSOR REMARK 3 S11: -0.1100 S12: 0.2599 S13: -0.4139 REMARK 3 S21: -0.2630 S22: 0.1621 S23: 0.0293 REMARK 3 S31: 0.5357 S32: -0.1833 S33: 0.0404 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6337 -28.5559 9.6740 REMARK 3 T TENSOR REMARK 3 T11: 0.6483 T22: 0.6480 REMARK 3 T33: 0.6250 T12: -0.1336 REMARK 3 T13: 0.0208 T23: -0.2426 REMARK 3 L TENSOR REMARK 3 L11: 4.6159 L22: 5.1029 REMARK 3 L33: 3.6577 L12: -3.1059 REMARK 3 L13: -1.7826 L23: 2.2855 REMARK 3 S TENSOR REMARK 3 S11: 0.1630 S12: 0.4217 S13: -0.5129 REMARK 3 S21: -0.2696 S22: -0.0508 S23: -0.2158 REMARK 3 S31: 0.5280 S32: -0.0597 S33: 0.0222 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.3593 -36.4600 3.8682 REMARK 3 T TENSOR REMARK 3 T11: 1.0313 T22: 0.8402 REMARK 3 T33: 0.7851 T12: -0.2577 REMARK 3 T13: 0.0013 T23: -0.3008 REMARK 3 L TENSOR REMARK 3 L11: 1.5734 L22: 2.1723 REMARK 3 L33: 1.9248 L12: -1.3558 REMARK 3 L13: -0.6853 L23: 1.5546 REMARK 3 S TENSOR REMARK 3 S11: -0.0244 S12: 0.2771 S13: -0.4721 REMARK 3 S21: -0.1945 S22: -0.1978 S23: 0.2099 REMARK 3 S31: 0.9109 S32: -0.2336 S33: 0.1114 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.4852 -12.7864 18.9333 REMARK 3 T TENSOR REMARK 3 T11: 0.4254 T22: 0.6283 REMARK 3 T33: 0.4292 T12: -0.1314 REMARK 3 T13: -0.0425 T23: -0.0631 REMARK 3 L TENSOR REMARK 3 L11: 2.9924 L22: 1.6587 REMARK 3 L33: 2.0058 L12: 0.8723 REMARK 3 L13: -0.6044 L23: 0.2601 REMARK 3 S TENSOR REMARK 3 S11: -0.1676 S12: 0.2194 S13: -0.3341 REMARK 3 S21: -0.3798 S22: 0.1044 S23: 0.1443 REMARK 3 S31: 0.5656 S32: -0.4184 S33: 0.0342 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1148 -0.3606 16.0336 REMARK 3 T TENSOR REMARK 3 T11: 0.3751 T22: 0.5261 REMARK 3 T33: 0.2864 T12: -0.0482 REMARK 3 T13: -0.0707 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.4249 L22: 2.3775 REMARK 3 L33: 2.1691 L12: 0.5384 REMARK 3 L13: 0.4210 L23: 0.7093 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: 0.4288 S13: -0.0197 REMARK 3 S21: -0.3919 S22: -0.0469 S23: 0.0396 REMARK 3 S31: -0.1748 S32: -0.3718 S33: 0.0071 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.0426 -4.1591 17.8663 REMARK 3 T TENSOR REMARK 3 T11: 0.4447 T22: 0.7815 REMARK 3 T33: 0.3857 T12: -0.0828 REMARK 3 T13: -0.1286 T23: -0.0446 REMARK 3 L TENSOR REMARK 3 L11: 0.2202 L22: 1.0055 REMARK 3 L33: 2.0966 L12: -0.4886 REMARK 3 L13: -0.6255 L23: 1.4337 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: 0.1351 S13: -0.2474 REMARK 3 S21: -0.7495 S22: -0.3210 S23: 0.2340 REMARK 3 S31: 0.2588 S32: -0.8063 S33: 0.3453 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.4974 3.3792 23.2766 REMARK 3 T TENSOR REMARK 3 T11: 0.3294 T22: 0.6723 REMARK 3 T33: 0.4690 T12: 0.0237 REMARK 3 T13: -0.0580 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 1.3220 L22: 1.9520 REMARK 3 L33: 2.7950 L12: 0.7795 REMARK 3 L13: -0.1085 L23: 0.0619 REMARK 3 S TENSOR REMARK 3 S11: 0.0884 S12: 0.3831 S13: 0.1995 REMARK 3 S21: -0.1891 S22: 0.0014 S23: 0.5837 REMARK 3 S31: -0.1610 S32: -0.9003 S33: 0.0996 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 64 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.8627 6.2803 27.9052 REMARK 3 T TENSOR REMARK 3 T11: 0.3401 T22: 0.4476 REMARK 3 T33: 0.3662 T12: -0.0431 REMARK 3 T13: -0.0431 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 2.8813 L22: 1.0167 REMARK 3 L33: 3.5733 L12: -1.1405 REMARK 3 L13: -2.4854 L23: 0.2961 REMARK 3 S TENSOR REMARK 3 S11: -0.3619 S12: 0.0227 S13: 0.0704 REMARK 3 S21: -0.0556 S22: 0.3039 S23: -0.0072 REMARK 3 S31: -0.0798 S32: -0.0165 S33: -0.0686 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3772 -7.4538 13.9949 REMARK 3 T TENSOR REMARK 3 T11: 0.3964 T22: 0.6244 REMARK 3 T33: 0.4231 T12: -0.0611 REMARK 3 T13: 0.0547 T23: -0.0862 REMARK 3 L TENSOR REMARK 3 L11: 0.5832 L22: 1.5806 REMARK 3 L33: 2.3017 L12: 0.0590 REMARK 3 L13: -0.0359 L23: 1.1170 REMARK 3 S TENSOR REMARK 3 S11: -0.0283 S12: 0.2051 S13: -0.2719 REMARK 3 S21: -0.4581 S22: 0.1665 S23: -0.2001 REMARK 3 S31: -0.0828 S32: 0.5135 S33: -0.1944 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 98 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1975 -20.1007 -7.7588 REMARK 3 T TENSOR REMARK 3 T11: 0.6332 T22: 1.2921 REMARK 3 T33: 0.5283 T12: -0.0201 REMARK 3 T13: 0.0284 T23: -0.3373 REMARK 3 L TENSOR REMARK 3 L11: 0.8578 L22: 1.2938 REMARK 3 L33: 3.7064 L12: -0.2791 REMARK 3 L13: -0.1185 L23: 1.3471 REMARK 3 S TENSOR REMARK 3 S11: 0.1758 S12: 1.4648 S13: -0.4890 REMARK 3 S21: -0.4975 S22: -0.1481 S23: 0.0935 REMARK 3 S31: -0.0389 S32: -0.3279 S33: -0.0935 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 133 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.4150 -15.9296 -19.6070 REMARK 3 T TENSOR REMARK 3 T11: 1.0367 T22: 1.5472 REMARK 3 T33: 0.6784 T12: 0.0611 REMARK 3 T13: -0.0945 T23: -0.1806 REMARK 3 L TENSOR REMARK 3 L11: 0.9488 L22: 0.0053 REMARK 3 L33: 1.2786 L12: 0.1344 REMARK 3 L13: -1.0966 L23: -0.1525 REMARK 3 S TENSOR REMARK 3 S11: 0.1188 S12: 0.8935 S13: 0.4282 REMARK 3 S21: -0.5135 S22: -0.1534 S23: -0.0610 REMARK 3 S31: -0.0812 S32: 0.0300 S33: -0.2174 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5550 -19.8416 -0.2667 REMARK 3 T TENSOR REMARK 3 T11: 0.6199 T22: 1.0446 REMARK 3 T33: 0.5006 T12: -0.0836 REMARK 3 T13: 0.0361 T23: -0.2493 REMARK 3 L TENSOR REMARK 3 L11: 1.2020 L22: 0.9222 REMARK 3 L33: 3.5612 L12: -0.0618 REMARK 3 L13: -0.7913 L23: -0.0733 REMARK 3 S TENSOR REMARK 3 S11: 0.4002 S12: 0.9981 S13: -0.5136 REMARK 3 S21: -0.3307 S22: -0.1292 S23: 0.1944 REMARK 3 S31: 0.2687 S32: -0.2055 S33: -0.0196 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2764 -18.1930 -14.6581 REMARK 3 T TENSOR REMARK 3 T11: 0.7321 T22: 1.6565 REMARK 3 T33: 0.5571 T12: -0.0967 REMARK 3 T13: -0.0249 T23: -0.3194 REMARK 3 L TENSOR REMARK 3 L11: 0.2996 L22: 0.9882 REMARK 3 L33: 5.6754 L12: -0.4953 REMARK 3 L13: -0.4758 L23: 1.6365 REMARK 3 S TENSOR REMARK 3 S11: -0.2570 S12: 0.9873 S13: -0.6499 REMARK 3 S21: -0.6262 S22: 0.3595 S23: 0.1379 REMARK 3 S31: -0.1336 S32: -0.1255 S33: -0.1122 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9097 -16.0059 -8.1438 REMARK 3 T TENSOR REMARK 3 T11: 0.6618 T22: 1.2455 REMARK 3 T33: 0.6728 T12: 0.0027 REMARK 3 T13: 0.0541 T23: -0.2277 REMARK 3 L TENSOR REMARK 3 L11: 0.1146 L22: 0.6146 REMARK 3 L33: 1.3153 L12: -0.2673 REMARK 3 L13: -0.2349 L23: 0.8686 REMARK 3 S TENSOR REMARK 3 S11: 0.0724 S12: 1.2088 S13: -0.6786 REMARK 3 S21: -0.4749 S22: 0.1783 S23: 0.2590 REMARK 3 S31: -0.1069 S32: 0.1160 S33: -0.1352 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 69 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.8026 -4.9176 28.3970 REMARK 3 T TENSOR REMARK 3 T11: 0.2663 T22: 0.3959 REMARK 3 T33: 0.3381 T12: -0.0523 REMARK 3 T13: 0.0271 T23: -0.0639 REMARK 3 L TENSOR REMARK 3 L11: 0.1891 L22: 1.1978 REMARK 3 L33: 1.4842 L12: 0.1943 REMARK 3 L13: 0.5735 L23: 0.3351 REMARK 3 S TENSOR REMARK 3 S11: 0.0647 S12: 0.2573 S13: 0.0699 REMARK 3 S21: -0.1997 S22: -0.0265 S23: 0.1549 REMARK 3 S31: -0.0884 S32: -0.3046 S33: -0.0391 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6543 10.0574 45.9000 REMARK 3 T TENSOR REMARK 3 T11: 0.2074 T22: 0.3135 REMARK 3 T33: 0.5236 T12: -0.0206 REMARK 3 T13: 0.0204 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 2.0110 L22: 1.6364 REMARK 3 L33: 2.7243 L12: 0.7640 REMARK 3 L13: 0.4852 L23: 0.3283 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.2982 S13: -0.3227 REMARK 3 S21: 0.0188 S22: 0.1952 S23: -0.2985 REMARK 3 S31: 0.1569 S32: 0.2180 S33: -0.1689 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 34 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3951 13.3813 44.8475 REMARK 3 T TENSOR REMARK 3 T11: 0.2517 T22: 0.3475 REMARK 3 T33: 0.4113 T12: -0.0447 REMARK 3 T13: 0.0216 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.7575 L22: 1.8802 REMARK 3 L33: 1.9398 L12: 0.5801 REMARK 3 L13: 0.5648 L23: 1.3787 REMARK 3 S TENSOR REMARK 3 S11: -0.0797 S12: 0.1942 S13: 0.0599 REMARK 3 S21: -0.1071 S22: 0.0959 S23: -0.0619 REMARK 3 S31: -0.1725 S32: 0.1398 S33: -0.0912 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 135 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1781 25.8725 75.9874 REMARK 3 T TENSOR REMARK 3 T11: 0.2381 T22: 0.2657 REMARK 3 T33: 0.4531 T12: 0.0158 REMARK 3 T13: 0.0014 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 2.4996 L22: 2.4116 REMARK 3 L33: 2.1798 L12: 0.1234 REMARK 3 L13: 0.4089 L23: -0.2537 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: -0.2072 S13: 0.1535 REMARK 3 S21: 0.1497 S22: 0.0858 S23: -0.0558 REMARK 3 S31: -0.0450 S32: -0.0096 S33: -0.1017 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 3 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3518 -2.0280 52.9927 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.3006 REMARK 3 T33: 0.4303 T12: -0.0380 REMARK 3 T13: -0.0018 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.7526 L22: 1.2280 REMARK 3 L33: 4.2272 L12: -0.1658 REMARK 3 L13: -0.2946 L23: 0.4084 REMARK 3 S TENSOR REMARK 3 S11: 0.0533 S12: 0.0261 S13: 0.0174 REMARK 3 S21: 0.0954 S22: -0.0037 S23: -0.0012 REMARK 3 S31: 0.1037 S32: -0.0781 S33: 0.0220 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 58 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5892 -6.1901 48.6592 REMARK 3 T TENSOR REMARK 3 T11: 0.2711 T22: 0.3472 REMARK 3 T33: 0.4421 T12: -0.0206 REMARK 3 T13: -0.0261 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.3491 L22: 0.8529 REMARK 3 L33: 2.9116 L12: 0.3257 REMARK 3 L13: -0.4397 L23: -0.0818 REMARK 3 S TENSOR REMARK 3 S11: 0.0433 S12: 0.1153 S13: -0.1947 REMARK 3 S21: -0.0115 S22: -0.0062 S23: 0.1223 REMARK 3 S31: 0.3835 S32: -0.0724 S33: 0.0026 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 122 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1887 -1.2771 72.6511 REMARK 3 T TENSOR REMARK 3 T11: 0.2772 T22: 0.2414 REMARK 3 T33: 0.3551 T12: -0.0433 REMARK 3 T13: 0.0049 T23: 0.0638 REMARK 3 L TENSOR REMARK 3 L11: 1.7761 L22: 2.5255 REMARK 3 L33: 4.4237 L12: -0.3830 REMARK 3 L13: -0.0017 L23: 3.1872 REMARK 3 S TENSOR REMARK 3 S11: 0.0532 S12: -0.1916 S13: -0.1675 REMARK 3 S21: 0.4685 S22: 0.1594 S23: -0.1282 REMARK 3 S31: 0.5300 S32: 0.2075 S33: -0.0047 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 137 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7635 22.0132 73.4300 REMARK 3 T TENSOR REMARK 3 T11: 0.2068 T22: 0.2485 REMARK 3 T33: 0.3930 T12: 0.0243 REMARK 3 T13: 0.0158 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.3289 L22: 2.3887 REMARK 3 L33: 1.3888 L12: 0.5119 REMARK 3 L13: -0.1011 L23: 0.1482 REMARK 3 S TENSOR REMARK 3 S11: 0.0302 S12: 0.0104 S13: 0.0810 REMARK 3 S21: -0.0537 S22: -0.0012 S23: -0.1003 REMARK 3 S31: -0.0374 S32: -0.0827 S33: -0.0069 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 228 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8451 8.6896 77.9929 REMARK 3 T TENSOR REMARK 3 T11: 0.2865 T22: 0.3720 REMARK 3 T33: 0.4030 T12: -0.0664 REMARK 3 T13: 0.0805 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.5982 L22: 4.7030 REMARK 3 L33: 2.2384 L12: -0.9526 REMARK 3 L13: -0.4013 L23: -0.1872 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: -0.1254 S13: -0.1925 REMARK 3 S21: 0.4383 S22: -0.1012 S23: 0.4657 REMARK 3 S31: 0.3865 S32: -0.3645 S33: 0.0841 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V1A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1000245536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49925 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 49.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6BIL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M TRISODIUM CITRATE, 20% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 74.67200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.49500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 74.67200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.49500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 1 REMARK 465 THR A 182 REMARK 465 SER A 183 REMARK 465 GLY A 184 REMARK 465 ASP A 185 REMARK 465 ASP A 186 REMARK 465 ASP A 187 REMARK 465 ASP A 188 REMARK 465 LYS A 189 REMARK 465 GLY B 1 REMARK 465 GLN B 107 REMARK 465 PRO B 108 REMARK 465 LEU B 109 REMARK 465 GLN B 110 REMARK 465 HIS B 111 REMARK 465 HIS B 112 REMARK 465 ASN B 113 REMARK 465 LEU B 114 REMARK 465 LEU B 115 REMARK 465 VAL B 164 REMARK 465 PRO B 165 REMARK 465 ARG B 166 REMARK 465 SER B 167 REMARK 465 GLY B 168 REMARK 465 ARG B 189 REMARK 465 ALA B 190 REMARK 465 THR B 191 REMARK 465 GLY B 192 REMARK 465 GLY B 193 REMARK 465 ASP B 194 REMARK 465 ASP B 195 REMARK 465 ASP B 196 REMARK 465 ASP B 197 REMARK 465 LYS B 198 REMARK 465 GLY D 1 REMARK 465 GLU D 219 REMARK 465 SER D 220 REMARK 465 SER D 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 470 GLU A 98 CG CD OE1 OE2 REMARK 470 LEU A 99 CG CD1 CD2 REMARK 470 ARG A 100 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 126 CG CD CE NZ REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 ASP A 171 CG OD1 OD2 REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LYS B 105 CG CD CE NZ REMARK 470 ARG B 133 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 136 CG CD OE1 NE2 REMARK 470 GLU B 137 CG CD OE1 OE2 REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 MET B 160 CG SD CE REMARK 470 GLU B 169 CG CD OE1 OE2 REMARK 470 VAL B 170 CG1 CG2 REMARK 470 GLU B 187 CG CD OE1 OE2 REMARK 470 GLU D 8 CG CD OE1 OE2 REMARK 470 THR D 28 OG1 CG2 REMARK 470 SER D 29 OG REMARK 470 ILE D 30 CG1 CG2 CD1 REMARK 470 LYS E 47 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN E 60 C GLN E 60 O 0.135 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA C 73 O - C - N ANGL. DEV. = 15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B 33 -109.87 70.90 REMARK 500 TYR B 78 -59.07 -120.39 REMARK 500 THR B 90 -69.78 -124.65 REMARK 500 PRO B 124 -168.51 -78.02 REMARK 500 ARG B 133 90.01 -162.28 REMARK 500 SER D 16 -2.10 79.21 REMARK 500 THR D 28 -85.56 -111.48 REMARK 500 TYR D 83 87.48 -66.95 REMARK 500 PHE D 87 56.02 -149.00 REMARK 500 SER E 93 89.12 -152.07 REMARK 500 ALA E 100 -179.94 -170.50 REMARK 500 HIS E 167 74.59 -114.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6V13 RELATED DB: PDB REMARK 900 SAME MHC II MOLECULE COMPLEX WITH TCR REMARK 900 RELATED ID: 6V15 RELATED DB: PDB REMARK 900 SAME MHC II MOLECULE COMPLEX WITH TCR REMARK 900 RELATED ID: 6V18 RELATED DB: PDB REMARK 900 SAME MHC II MOLECULE COMPLEX WITH TCR REMARK 900 RELATED ID: 6V19 RELATED DB: PDB REMARK 900 SAME MHC II MOLECULE COMPLEX WITH TCR REMARK 900 RELATED ID: 6V0Y RELATED DB: PDB REMARK 900 SAME MHC II MOLECULE COMPLEX WITH TCR DBREF 6V1A A 1 181 UNP P01903 DRA_HUMAN 26 206 DBREF 6V1A B 1 190 UNP P13760 2B14_HUMAN 30 219 DBREF 6V1A C 69 81 PDB 6V1A 6V1A 69 81 DBREF 6V1A D 1 221 PDB 6V1A 6V1A 1 221 DBREF 6V1A E 3 257 PDB 6V1A 6V1A 3 257 SEQADV 6V1A THR A 182 UNP P01903 EXPRESSION TAG SEQADV 6V1A SER A 183 UNP P01903 EXPRESSION TAG SEQADV 6V1A GLY A 184 UNP P01903 EXPRESSION TAG SEQADV 6V1A ASP A 185 UNP P01903 EXPRESSION TAG SEQADV 6V1A ASP A 186 UNP P01903 EXPRESSION TAG SEQADV 6V1A ASP A 187 UNP P01903 EXPRESSION TAG SEQADV 6V1A ASP A 188 UNP P01903 EXPRESSION TAG SEQADV 6V1A LYS A 189 UNP P01903 EXPRESSION TAG SEQADV 6V1A THR B 191 UNP P13760 EXPRESSION TAG SEQADV 6V1A GLY B 192 UNP P13760 EXPRESSION TAG SEQADV 6V1A GLY B 193 UNP P13760 EXPRESSION TAG SEQADV 6V1A ASP B 194 UNP P13760 EXPRESSION TAG SEQADV 6V1A ASP B 195 UNP P13760 EXPRESSION TAG SEQADV 6V1A ASP B 196 UNP P13760 EXPRESSION TAG SEQADV 6V1A ASP B 197 UNP P13760 EXPRESSION TAG SEQADV 6V1A LYS B 198 UNP P13760 EXPRESSION TAG SEQRES 1 A 189 ILE LYS GLU GLU HIS VAL ILE ILE GLN ALA GLU PHE TYR SEQRES 2 A 189 LEU ASN PRO ASP GLN SER GLY GLU PHE MET PHE ASP PHE SEQRES 3 A 189 ASP GLY ASP GLU ILE PHE HIS VAL ASP MET ALA LYS LYS SEQRES 4 A 189 GLU THR VAL TRP ARG LEU GLU GLU PHE GLY ARG PHE ALA SEQRES 5 A 189 SER PHE GLU ALA GLN GLY ALA LEU ALA ASN ILE ALA VAL SEQRES 6 A 189 ASP LYS ALA ASN LEU GLU ILE MET THR LYS ARG SER ASN SEQRES 7 A 189 TYR THR PRO ILE THR ASN VAL PRO PRO GLU VAL THR VAL SEQRES 8 A 189 LEU THR ASN SER PRO VAL GLU LEU ARG GLU PRO ASN VAL SEQRES 9 A 189 LEU ILE CYS PHE ILE ASP LYS PHE THR PRO PRO VAL VAL SEQRES 10 A 189 ASN VAL THR TRP LEU ARG ASN GLY LYS PRO VAL THR THR SEQRES 11 A 189 GLY VAL SER GLU THR VAL PHE LEU PRO ARG GLU ASP HIS SEQRES 12 A 189 LEU PHE ARG LYS PHE HIS TYR LEU PRO PHE LEU PRO SER SEQRES 13 A 189 THR GLU ASP VAL TYR ASP CYS ARG VAL GLU HIS TRP GLY SEQRES 14 A 189 LEU ASP GLU PRO LEU LEU LYS HIS TRP GLU PHE ASP THR SEQRES 15 A 189 SER GLY ASP ASP ASP ASP LYS SEQRES 1 B 198 GLY ASP THR ARG PRO ARG PHE LEU GLU GLN VAL LYS HIS SEQRES 2 B 198 GLU CYS HIS PHE PHE ASN GLY THR GLU ARG VAL ARG PHE SEQRES 3 B 198 LEU ASP ARG TYR PHE TYR HIS GLN GLU GLU TYR VAL ARG SEQRES 4 B 198 PHE ASP SER ASP VAL GLY GLU TYR ARG ALA VAL THR GLU SEQRES 5 B 198 LEU GLY ARG PRO ASP ALA GLU TYR TRP ASN SER GLN LYS SEQRES 6 B 198 ASP LEU LEU GLU GLN LYS ARG ALA ALA VAL ASP THR TYR SEQRES 7 B 198 CYS ARG HIS ASN TYR GLY VAL GLY GLU SER PHE THR VAL SEQRES 8 B 198 GLN ARG ARG VAL TYR PRO GLU VAL THR VAL TYR PRO ALA SEQRES 9 B 198 LYS THR GLN PRO LEU GLN HIS HIS ASN LEU LEU VAL CYS SEQRES 10 B 198 SER VAL ASN GLY PHE TYR PRO GLY SER ILE GLU VAL ARG SEQRES 11 B 198 TRP PHE ARG ASN GLY GLN GLU GLU LYS THR GLY VAL VAL SEQRES 12 B 198 SER THR GLY LEU ILE GLN ASN GLY ASP TRP THR PHE GLN SEQRES 13 B 198 THR LEU VAL MET LEU GLU THR VAL PRO ARG SER GLY GLU SEQRES 14 B 198 VAL TYR THR CYS GLN VAL GLU HIS PRO SER LEU THR SER SEQRES 15 B 198 PRO LEU THR VAL GLU TRP ARG ALA THR GLY GLY ASP ASP SEQRES 16 B 198 ASP ASP LYS SEQRES 1 C 13 GLY GLY TYR ARG ALA CIR PRO ALA LYS ALA ALA ALA THR SEQRES 1 D 209 GLY ASP SER VAL THR GLN THR GLU GLY GLN VAL THR VAL SEQRES 2 D 209 SER GLU SER LYS SER LEU ILE ILE ASN CYS THR TYR SER SEQRES 3 D 209 ALA THR SER ILE ALA TYR PRO ASN LEU PHE TRP TYR VAL SEQRES 4 D 209 ARG TYR PRO GLY GLU GLY LEU GLN LEU LEU LEU LYS VAL SEQRES 5 D 209 ILE THR ALA GLY GLN LYS GLY SER SER ARG GLY PHE GLU SEQRES 6 D 209 ALA THR TYR ASN LYS GLU THR THR SER PHE HIS LEU GLN SEQRES 7 D 209 LYS ALA SER VAL GLN GLU SER ASP SER ALA VAL TYR TYR SEQRES 8 D 209 CYS ALA LEU SER ASP SER SER SER PHE SER LYS LEU VAL SEQRES 9 D 209 PHE GLY GLN GLY THR SER LEU SER VAL VAL PRO ASN ILE SEQRES 10 D 209 GLN ASN PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER SEQRES 11 D 209 LYS SER SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE SEQRES 12 D 209 ASP SER GLN THR ASN VAL SER GLN SER LYS ASP SER ASP SEQRES 13 D 209 VAL TYR ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER SEQRES 14 D 209 MET ASP PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN SEQRES 15 D 209 LYS SER ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER SEQRES 16 D 209 ILE ILE PRO GLU ASP THR PHE PHE PRO SER PRO GLU SER SEQRES 17 D 209 SER SEQRES 1 E 242 ALA VAL PHE GLN THR PRO ASN TYR HIS VAL THR GLN VAL SEQRES 2 E 242 GLY ASN GLU VAL SER PHE ASN CYS LYS GLN THR LEU GLY SEQRES 3 E 242 HIS ASP THR MET TYR TRP TYR LYS GLN ASP SER LYS LYS SEQRES 4 E 242 LEU LEU LYS ILE MET PHE SER TYR ASN ASN LYS GLN LEU SEQRES 5 E 242 ILE VAL ASN GLU THR VAL PRO ARG ARG PHE SER PRO GLN SEQRES 6 E 242 SER SER ASP LYS ALA HIS LEU ASN LEU ARG ILE LYS SER SEQRES 7 E 242 VAL GLU PRO GLU ASP SER ALA VAL TYR LEU CYS ALA SER SEQRES 8 E 242 SER LEU ASP TRP ALA SER GLN ASN THR LEU TYR PHE GLY SEQRES 9 E 242 ALA GLY THR ARG LEU SER VAL LEU GLU ASP LEU ASN LYS SEQRES 10 E 242 VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SER GLU SEQRES 11 E 242 ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU VAL CYS SEQRES 12 E 242 LEU ALA THR GLY PHE PHE PRO ASP HIS VAL GLU LEU SER SEQRES 13 E 242 TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY VAL CYS SEQRES 14 E 242 THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA LEU ASN SEQRES 15 E 242 ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG VAL SER SEQRES 16 E 242 ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE ARG CYS SEQRES 17 E 242 GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP GLU TRP SEQRES 18 E 242 THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE VAL SER SEQRES 19 E 242 ALA GLU ALA TRP GLY ARG ALA ASP HET CIR C 74 11 HET NAG A 201 14 HET NAG A 202 14 HET NAG B 201 14 HET GOL B 202 6 HET GOL B 203 6 HET GOL B 204 6 HET GOL B 205 6 HET GOL C 101 6 HET NA D 301 1 HET GOL D 302 6 HET GOL D 303 6 HET GOL D 304 6 HET GOL D 305 6 HET GOL D 306 6 HET GOL D 307 6 HET GOL D 308 6 HET GOL D 309 6 HET GOL D 310 6 HET GOL E 301 6 HET GOL E 302 6 HET GOL E 303 6 HET GOL E 304 6 HET GOL E 305 6 HET GOL E 306 6 HETNAM CIR CITRULLINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CIR C6 H13 N3 O3 FORMUL 6 NAG 3(C8 H15 N O6) FORMUL 9 GOL 20(C3 H8 O3) FORMUL 14 NA NA 1+ FORMUL 30 HOH *289(H2 O) HELIX 1 AA1 GLU A 47 ALA A 52 1 6 HELIX 2 AA2 ALA A 56 SER A 77 1 22 HELIX 3 AA3 THR B 51 LEU B 53 5 3 HELIX 4 AA4 GLY B 54 GLN B 64 1 11 HELIX 5 AA5 ASP B 66 ALA B 73 1 8 HELIX 6 AA6 ALA B 73 TYR B 78 1 6 HELIX 7 AA7 TYR B 78 GLY B 86 1 9 HELIX 8 AA8 GLU B 87 THR B 90 5 4 HELIX 9 AA9 GLN D 95 SER D 99 5 5 HELIX 10 AB1 GLU E 95 SER E 99 5 5 HELIX 11 AB2 ASP E 129 VAL E 133 5 5 HELIX 12 AB3 SER E 144 GLN E 152 1 9 HELIX 13 AB4 ALA E 211 GLN E 215 1 5 SHEET 1 AA1 8 GLU A 40 TRP A 43 0 SHEET 2 AA1 8 ASP A 29 ASP A 35 -1 N HIS A 33 O VAL A 42 SHEET 3 AA1 8 SER A 19 PHE A 26 -1 N PHE A 26 O ASP A 29 SHEET 4 AA1 8 GLU A 4 ASN A 15 -1 N ILE A 8 O ASP A 25 SHEET 5 AA1 8 PHE B 7 PHE B 18 -1 O PHE B 17 N HIS A 5 SHEET 6 AA1 8 ARG B 23 TYR B 32 -1 O PHE B 31 N GLN B 10 SHEET 7 AA1 8 GLU B 35 ASP B 41 -1 O GLU B 35 N TYR B 32 SHEET 8 AA1 8 TYR B 47 ALA B 49 -1 O ARG B 48 N ARG B 39 SHEET 1 AA2 4 GLU A 88 THR A 93 0 SHEET 2 AA2 4 ASN A 103 PHE A 112 -1 O PHE A 108 N THR A 90 SHEET 3 AA2 4 PHE A 145 PHE A 153 -1 O LEU A 151 N LEU A 105 SHEET 4 AA2 4 SER A 133 GLU A 134 -1 N SER A 133 O TYR A 150 SHEET 1 AA3 4 GLU A 88 THR A 93 0 SHEET 2 AA3 4 ASN A 103 PHE A 112 -1 O PHE A 108 N THR A 90 SHEET 3 AA3 4 PHE A 145 PHE A 153 -1 O LEU A 151 N LEU A 105 SHEET 4 AA3 4 LEU A 138 PRO A 139 -1 N LEU A 138 O ARG A 146 SHEET 1 AA4 4 LYS A 126 VAL A 128 0 SHEET 2 AA4 4 ASN A 118 ARG A 123 -1 N ARG A 123 O LYS A 126 SHEET 3 AA4 4 TYR A 161 GLU A 166 -1 O ARG A 164 N THR A 120 SHEET 4 AA4 4 LEU A 174 TRP A 178 -1 O LEU A 174 N VAL A 165 SHEET 1 AA5 4 GLU B 98 VAL B 101 0 SHEET 2 AA5 4 CYS B 117 PHE B 122 -1 O SER B 118 N THR B 100 SHEET 3 AA5 4 PHE B 155 LEU B 161 -1 O THR B 157 N VAL B 119 SHEET 4 AA5 4 VAL B 142 SER B 144 -1 N VAL B 143 O MET B 160 SHEET 1 AA6 4 GLU B 98 VAL B 101 0 SHEET 2 AA6 4 CYS B 117 PHE B 122 -1 O SER B 118 N THR B 100 SHEET 3 AA6 4 PHE B 155 LEU B 161 -1 O THR B 157 N VAL B 119 SHEET 4 AA6 4 ILE B 148 GLN B 149 -1 N ILE B 148 O GLN B 156 SHEET 1 AA7 3 GLU B 128 PHE B 132 0 SHEET 2 AA7 3 THR B 172 GLU B 176 -1 O GLU B 176 N GLU B 128 SHEET 3 AA7 3 LEU B 184 GLU B 187 -1 O LEU B 184 N VAL B 175 SHEET 1 AA8 2 VAL D 4 GLN D 6 0 SHEET 2 AA8 2 CYS D 23 TYR D 25 -1 O THR D 24 N THR D 5 SHEET 1 AA9 5 GLN D 10 SER D 14 0 SHEET 2 AA9 5 THR D 121 VAL D 126 1 O SER D 122 N VAL D 11 SHEET 3 AA9 5 ALA D 100 ASP D 108 -1 N ALA D 100 O LEU D 123 SHEET 4 AA9 5 PRO D 33 ARG D 44 -1 N TYR D 42 O TYR D 103 SHEET 5 AA9 5 LEU D 50 VAL D 56 -1 O GLN D 51 N VAL D 43 SHEET 1 AB1 4 GLN D 10 SER D 14 0 SHEET 2 AB1 4 THR D 121 VAL D 126 1 O SER D 122 N VAL D 11 SHEET 3 AB1 4 ALA D 100 ASP D 108 -1 N ALA D 100 O LEU D 123 SHEET 4 AB1 4 VAL D 116 PHE D 117 -1 O VAL D 116 N LEU D 106 SHEET 1 AB2 4 LEU D 19 ILE D 21 0 SHEET 2 AB2 4 LEU D 89 LYS D 91 -1 O LEU D 89 N ILE D 21 SHEET 3 AB2 4 PHE D 79 THR D 82 -1 N GLU D 80 O GLN D 90 SHEET 4 AB2 4 LYS D 66 SER D 69 -1 N GLY D 67 O ALA D 81 SHEET 1 AB3 8 VAL D 169 ILE D 171 0 SHEET 2 AB3 8 PHE D 184 SER D 193 -1 O TRP D 192 N TYR D 170 SHEET 3 AB3 8 SER D 148 THR D 153 -1 N CYS D 150 O ALA D 191 SHEET 4 AB3 8 ALA D 135 ASP D 141 -1 N TYR D 137 O LEU D 151 SHEET 5 AB3 8 GLU E 137 GLU E 142 -1 O GLU E 142 N ARG D 140 SHEET 6 AB3 8 LYS E 153 PHE E 163 -1 O VAL E 157 N PHE E 141 SHEET 7 AB3 8 TYR E 201 SER E 210 -1 O LEU E 207 N LEU E 156 SHEET 8 AB3 8 VAL E 183 THR E 185 -1 N CYS E 184 O ARG E 206 SHEET 1 AB4 8 CYS D 175 MET D 179 0 SHEET 2 AB4 8 PHE D 184 SER D 193 -1 O PHE D 184 N MET D 179 SHEET 3 AB4 8 SER D 148 THR D 153 -1 N CYS D 150 O ALA D 191 SHEET 4 AB4 8 ALA D 135 ASP D 141 -1 N TYR D 137 O LEU D 151 SHEET 5 AB4 8 GLU E 137 GLU E 142 -1 O GLU E 142 N ARG D 140 SHEET 6 AB4 8 LYS E 153 PHE E 163 -1 O VAL E 157 N PHE E 141 SHEET 7 AB4 8 TYR E 201 SER E 210 -1 O LEU E 207 N LEU E 156 SHEET 8 AB4 8 LEU E 190 LYS E 191 -1 N LEU E 190 O ALA E 202 SHEET 1 AB5 4 VAL E 4 THR E 7 0 SHEET 2 AB5 4 VAL E 19 GLN E 25 -1 O LYS E 24 N PHE E 5 SHEET 3 AB5 4 ASN E 88 ILE E 91 -1 O LEU E 89 N PHE E 21 SHEET 4 AB5 4 PHE E 76 GLN E 79 -1 N SER E 77 O ARG E 90 SHEET 1 AB6 6 TYR E 10 GLN E 14 0 SHEET 2 AB6 6 THR E 122 LEU E 127 1 O LEU E 127 N THR E 13 SHEET 3 AB6 6 ALA E 100 SER E 107 -1 N ALA E 100 O LEU E 124 SHEET 4 AB6 6 THR E 31 GLN E 44 -1 N TYR E 40 O ALA E 105 SHEET 5 AB6 6 LEU E 50 ASN E 57 -1 O TYR E 56 N MET E 39 SHEET 6 AB6 6 GLN E 60 ASN E 68 -1 O ILE E 66 N SER E 55 SHEET 1 AB7 4 TYR E 10 GLN E 14 0 SHEET 2 AB7 4 THR E 122 LEU E 127 1 O LEU E 127 N THR E 13 SHEET 3 AB7 4 ALA E 100 SER E 107 -1 N ALA E 100 O LEU E 124 SHEET 4 AB7 4 TYR E 117 PHE E 118 -1 O TYR E 117 N SER E 106 SHEET 1 AB8 4 LYS E 177 VAL E 179 0 SHEET 2 AB8 4 VAL E 168 VAL E 174 -1 N VAL E 174 O LYS E 177 SHEET 3 AB8 4 HIS E 220 PHE E 227 -1 O GLN E 224 N SER E 171 SHEET 4 AB8 4 GLN E 246 TRP E 253 -1 O GLN E 246 N PHE E 227 SSBOND 1 CYS A 107 CYS A 163 1555 1555 2.03 SSBOND 2 CYS B 15 CYS B 79 1555 1555 2.03 SSBOND 3 CYS B 117 CYS B 173 1555 1555 2.03 SSBOND 4 CYS D 23 CYS D 104 1555 1555 2.03 SSBOND 5 CYS D 150 CYS D 200 1555 1555 2.04 SSBOND 6 CYS D 175 CYS E 184 1555 1555 2.03 SSBOND 7 CYS E 23 CYS E 104 1555 1555 2.03 SSBOND 8 CYS E 158 CYS E 223 1555 1555 2.03 LINK ND2 ASN A 78 C1 NAG A 202 1555 1555 1.44 LINK ND2 ASN A 118 C1 NAG A 201 1555 1555 1.44 LINK ND2 ASN B 19 C1 NAG B 201 1555 1555 1.44 LINK C ALA C 73 N CIR C 74 1555 1555 1.38 LINK C CIR C 74 N PRO C 75 1555 1555 1.31 LINK O GLY D 78 NA NA D 301 1555 1555 3.07 CISPEP 1 ASN A 15 PRO A 16 0 -1.33 CISPEP 2 THR A 113 PRO A 114 0 -0.35 CISPEP 3 TYR B 123 PRO B 124 0 4.11 CISPEP 4 ARG B 133 ASN B 134 0 -6.13 CISPEP 5 THR E 7 PRO E 8 0 -4.14 CISPEP 6 PHE E 164 PRO E 165 0 0.61 CRYST1 149.344 56.990 131.184 90.00 90.87 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006696 0.000000 0.000102 0.00000 SCALE2 0.000000 0.017547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007624 0.00000