HEADER VIRAL PROTEIN 22-NOV-19 6V2F TITLE CRYSTAL STRUCTURE OF THE HIV CAPSID HEXAMER BOUND TO THE SMALL TITLE 2 MOLECULE LONG-ACTING INHIBITOR, GS-6207 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 CAPSID; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 GENE: GAG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HIV CAPSID, CAPSID ASSEMBLY ACCELERATOR, LONG-ACTING INHIBITOR, KEYWDS 2 ANTIVIRAL, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.C.APPLEBY,J.O.LINK,S.R.YANT,A.G.VILLASENOR,J.R.SOMOZA,E.Y.HU, AUTHOR 2 S.D.SCHROEDER,T.CIHLAR REVDAT 5 18-OCT-23 6V2F 1 REMARK REVDAT 4 02-NOV-22 6V2F 1 HETSYN REVDAT 3 09-SEP-20 6V2F 1 JRNL SSBOND REVDAT 2 15-JUL-20 6V2F 1 JRNL REVDAT 1 01-JUL-20 6V2F 0 JRNL AUTH J.O.LINK,M.S.RHEE,W.C.TSE,J.ZHENG,J.R.SOMOZA,W.ROWE, JRNL AUTH 2 R.BEGLEY,A.CHIU,A.MULATO,D.HANSEN,E.SINGER,L.K.TSAI,R.A.BAM, JRNL AUTH 3 C.H.CHOU,E.CANALES,G.BRIZGYS,J.R.ZHANG,J.LI,M.GRAUPE, JRNL AUTH 4 P.MORGANELLI,Q.LIU,Q.WU,R.L.HALCOMB,R.D.SAITO,S.D.SCHROEDER, JRNL AUTH 5 S.E.LAZERWITH,S.BONDY,D.JIN,M.HUNG,N.NOVIKOV,X.LIU, JRNL AUTH 6 A.G.VILLASENOR,C.E.CANNIZZARO,E.Y.HU,R.L.ANDERSON, JRNL AUTH 7 T.C.APPLEBY,B.LU,J.MWANGI,A.LICLICAN,A.NIEDZIELA-MAJKA, JRNL AUTH 8 G.A.PAPALIA,M.H.WONG,S.A.LEAVITT,Y.XU,D.KODITEK,G.J.STEPAN, JRNL AUTH 9 H.YU,N.PAGRATIS,S.CLANCY,S.AHMADYAR,T.Z.CAI,S.SELLERS, JRNL AUTH10 S.A.WOLCKENHAUER,J.LING,C.CALLEBAUT,N.MARGOT,R.R.RAM, JRNL AUTH11 Y.P.LIU,R.HYLAND,G.I.SINCLAIR,P.J.RUANE,G.E.CROFOOT, JRNL AUTH12 C.K.MCDONALD,D.M.BRAINARD,L.LAD,S.SWAMINATHAN,W.I.SUNDQUIST, JRNL AUTH13 R.SAKOWICZ,A.E.CHESTER,W.E.LEE,E.S.DAAR,S.R.YANT,T.CIHLAR JRNL TITL CLINICAL TARGETING OF HIV CAPSID PROTEIN WITH A LONG-ACTING JRNL TITL 2 SMALL MOLECULE. JRNL REF NATURE V. 584 614 2020 JRNL REFN ESSN 1476-4687 JRNL PMID 32612233 JRNL DOI 10.1038/S41586-020-2443-1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 104668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9200 - 4.8200 1.00 7380 141 0.2121 0.2442 REMARK 3 2 4.8100 - 3.8200 1.00 7379 143 0.1853 0.2165 REMARK 3 3 3.8200 - 3.3400 1.00 7381 134 0.1999 0.2456 REMARK 3 4 3.3400 - 3.0400 1.00 7388 140 0.2156 0.2545 REMARK 3 5 3.0400 - 2.8200 1.00 7384 142 0.2211 0.2669 REMARK 3 6 2.8200 - 2.6500 1.00 7307 132 0.2089 0.2654 REMARK 3 7 2.6500 - 2.5200 1.00 7392 146 0.2127 0.2529 REMARK 3 8 2.5200 - 2.4100 0.99 7337 143 0.2098 0.2788 REMARK 3 9 2.4100 - 2.3200 1.00 7376 144 0.2103 0.2415 REMARK 3 10 2.3200 - 2.2400 0.99 7251 140 0.2043 0.2576 REMARK 3 11 2.2400 - 2.1700 0.99 7331 140 0.2163 0.3172 REMARK 3 12 2.1700 - 2.1100 0.99 7346 142 0.2246 0.2759 REMARK 3 13 2.1100 - 2.0500 0.99 7297 146 0.2353 0.2750 REMARK 3 14 2.0500 - 2.0000 0.97 7151 135 0.2577 0.2640 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.234 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.091 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 10062 REMARK 3 ANGLE : 0.637 13767 REMARK 3 CHIRALITY : 0.040 1503 REMARK 3 PLANARITY : 0.004 1719 REMARK 3 DIHEDRAL : 17.616 3725 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V2F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1000245610. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 105922 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.79500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3H47 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 3350, 0.2 M SODIUM REMARK 280 THIOCYANATE, 0.1 M SODIUM CACODYLATE, PH 6.7, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -55.64800 REMARK 350 BIOMT1 5 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -55.64800 REMARK 350 BIOMT1 6 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 -55.64800 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 79.15050 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 137.09269 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -79.15050 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 137.09269 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -55.64800 REMARK 350 BIOMT1 5 -0.500000 -0.866025 0.000000 79.15050 REMARK 350 BIOMT2 5 0.866025 -0.500000 0.000000 137.09269 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -55.64800 REMARK 350 BIOMT1 6 -0.500000 0.866025 0.000000 -79.15050 REMARK 350 BIOMT2 6 -0.866025 -0.500000 0.000000 137.09269 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 -55.64800 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -108.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 158.30100 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 79.15050 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 137.09269 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLN A 4 REMARK 465 ASN A 5 REMARK 465 LEU A 6 REMARK 465 GLN A 7 REMARK 465 GLY A 8 REMARK 465 GLN A 9 REMARK 465 VAL A 86 REMARK 465 HIS A 87 REMARK 465 ALA A 88 REMARK 465 GLY A 89 REMARK 465 PRO A 90 REMARK 465 ILE A 91 REMARK 465 ALA A 92 REMARK 465 GLY A 220 REMARK 465 VAL A 221 REMARK 465 GLY A 222 REMARK 465 GLY A 223 REMARK 465 PRO A 224 REMARK 465 GLY A 225 REMARK 465 HIS A 226 REMARK 465 LYS A 227 REMARK 465 ALA A 228 REMARK 465 ARG A 229 REMARK 465 VAL A 230 REMARK 465 LEU A 231 REMARK 465 MET B 0 REMARK 465 GLN B 4 REMARK 465 ASN B 5 REMARK 465 LEU B 6 REMARK 465 GLN B 7 REMARK 465 GLY B 8 REMARK 465 GLN B 9 REMARK 465 VAL B 86 REMARK 465 HIS B 87 REMARK 465 ALA B 88 REMARK 465 GLY B 89 REMARK 465 PRO B 90 REMARK 465 ILE B 91 REMARK 465 GLN B 176 REMARK 465 ALA B 177 REMARK 465 SER B 178 REMARK 465 GLN B 179 REMARK 465 GLU B 180 REMARK 465 VAL B 181 REMARK 465 LYS B 182 REMARK 465 ASN B 183 REMARK 465 ALA B 184 REMARK 465 ALA B 185 REMARK 465 THR B 186 REMARK 465 GLU B 187 REMARK 465 GLY B 220 REMARK 465 VAL B 221 REMARK 465 GLY B 222 REMARK 465 GLY B 223 REMARK 465 PRO B 224 REMARK 465 GLY B 225 REMARK 465 HIS B 226 REMARK 465 LYS B 227 REMARK 465 ALA B 228 REMARK 465 ARG B 229 REMARK 465 VAL B 230 REMARK 465 LEU B 231 REMARK 465 MET C 0 REMARK 465 ASN C 5 REMARK 465 LEU C 6 REMARK 465 GLN C 7 REMARK 465 GLY C 8 REMARK 465 VAL C 86 REMARK 465 HIS C 87 REMARK 465 ALA C 88 REMARK 465 GLY C 89 REMARK 465 PRO C 90 REMARK 465 ILE C 91 REMARK 465 GLN C 176 REMARK 465 ALA C 177 REMARK 465 SER C 178 REMARK 465 GLN C 179 REMARK 465 GLU C 180 REMARK 465 VAL C 181 REMARK 465 LYS C 182 REMARK 465 ASN C 183 REMARK 465 ALA C 184 REMARK 465 ALA C 185 REMARK 465 THR C 186 REMARK 465 GLU C 187 REMARK 465 THR C 188 REMARK 465 GLY C 220 REMARK 465 VAL C 221 REMARK 465 GLY C 222 REMARK 465 GLY C 223 REMARK 465 PRO C 224 REMARK 465 GLY C 225 REMARK 465 HIS C 226 REMARK 465 LYS C 227 REMARK 465 ALA C 228 REMARK 465 ARG C 229 REMARK 465 VAL C 230 REMARK 465 LEU C 231 REMARK 465 MET D 0 REMARK 465 GLN D 4 REMARK 465 ASN D 5 REMARK 465 LEU D 6 REMARK 465 GLN D 7 REMARK 465 GLY D 8 REMARK 465 GLN D 9 REMARK 465 VAL D 86 REMARK 465 HIS D 87 REMARK 465 ALA D 88 REMARK 465 GLY D 89 REMARK 465 PRO D 90 REMARK 465 ILE D 91 REMARK 465 GLY D 220 REMARK 465 VAL D 221 REMARK 465 GLY D 222 REMARK 465 GLY D 223 REMARK 465 PRO D 224 REMARK 465 GLY D 225 REMARK 465 HIS D 226 REMARK 465 LYS D 227 REMARK 465 ALA D 228 REMARK 465 ARG D 229 REMARK 465 VAL D 230 REMARK 465 LEU D 231 REMARK 465 MET E 0 REMARK 465 GLN E 4 REMARK 465 ASN E 5 REMARK 465 LEU E 6 REMARK 465 GLN E 7 REMARK 465 GLY E 8 REMARK 465 GLN E 9 REMARK 465 VAL E 86 REMARK 465 HIS E 87 REMARK 465 ALA E 88 REMARK 465 GLY E 89 REMARK 465 PRO E 90 REMARK 465 ILE E 91 REMARK 465 ALA E 92 REMARK 465 GLY E 220 REMARK 465 VAL E 221 REMARK 465 GLY E 222 REMARK 465 GLY E 223 REMARK 465 PRO E 224 REMARK 465 GLY E 225 REMARK 465 HIS E 226 REMARK 465 LYS E 227 REMARK 465 ALA E 228 REMARK 465 ARG E 229 REMARK 465 VAL E 230 REMARK 465 LEU E 231 REMARK 465 MET F 0 REMARK 465 GLN F 4 REMARK 465 ASN F 5 REMARK 465 LEU F 6 REMARK 465 GLN F 7 REMARK 465 GLY F 8 REMARK 465 GLN F 9 REMARK 465 VAL F 86 REMARK 465 HIS F 87 REMARK 465 ALA F 88 REMARK 465 GLY F 89 REMARK 465 PRO F 90 REMARK 465 ILE F 91 REMARK 465 ALA F 92 REMARK 465 PRO F 93 REMARK 465 GLY F 94 REMARK 465 GLN F 95 REMARK 465 GLY F 220 REMARK 465 VAL F 221 REMARK 465 GLY F 222 REMARK 465 GLY F 223 REMARK 465 PRO F 224 REMARK 465 GLY F 225 REMARK 465 HIS F 226 REMARK 465 LYS F 227 REMARK 465 ALA F 228 REMARK 465 ARG F 229 REMARK 465 VAL F 230 REMARK 465 LEU F 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 203 CE NZ REMARK 470 LYS B 203 CD CE NZ REMARK 470 LYS C 203 CE NZ REMARK 470 LYS D 203 CE NZ REMARK 470 ARG E 18 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 203 CE NZ REMARK 470 ARG F 18 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 203 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 31 -121.46 51.96 REMARK 500 ALA B 31 -119.55 51.14 REMARK 500 ALA C 31 -123.69 52.50 REMARK 500 ALA D 31 -120.58 51.48 REMARK 500 ALA E 31 -116.06 50.90 REMARK 500 ALA F 31 -118.60 51.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 541 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH A 542 DISTANCE = 7.62 ANGSTROMS REMARK 525 HOH D 553 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH D 554 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH D 555 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH D 556 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH D 557 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH D 558 DISTANCE = 7.72 ANGSTROMS REMARK 525 HOH D 559 DISTANCE = 8.99 ANGSTROMS REMARK 525 HOH D 560 DISTANCE = 9.15 ANGSTROMS REMARK 525 HOH E 532 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH E 533 DISTANCE = 6.51 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QNG A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QNG B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QNG C 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QNG D 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QNG E 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QNG F 300 DBREF 6V2F A 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 DBREF 6V2F B 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 DBREF 6V2F C 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 DBREF 6V2F D 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 DBREF 6V2F E 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 DBREF 6V2F F 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 SEQADV 6V2F MET A 0 UNP B6DRA0 INITIATING METHIONINE SEQADV 6V2F CYS A 14 UNP B6DRA0 ALA 146 CONFLICT SEQADV 6V2F CYS A 45 UNP B6DRA0 GLU 177 CONFLICT SEQADV 6V2F ALA A 184 UNP B6DRA0 TRP 316 CONFLICT SEQADV 6V2F ALA A 185 UNP B6DRA0 MET 317 CONFLICT SEQADV 6V2F MET B 0 UNP B6DRA0 INITIATING METHIONINE SEQADV 6V2F CYS B 14 UNP B6DRA0 ALA 146 CONFLICT SEQADV 6V2F CYS B 45 UNP B6DRA0 GLU 177 CONFLICT SEQADV 6V2F ALA B 184 UNP B6DRA0 TRP 316 CONFLICT SEQADV 6V2F ALA B 185 UNP B6DRA0 MET 317 CONFLICT SEQADV 6V2F MET C 0 UNP B6DRA0 INITIATING METHIONINE SEQADV 6V2F CYS C 14 UNP B6DRA0 ALA 146 CONFLICT SEQADV 6V2F CYS C 45 UNP B6DRA0 GLU 177 CONFLICT SEQADV 6V2F ALA C 184 UNP B6DRA0 TRP 316 CONFLICT SEQADV 6V2F ALA C 185 UNP B6DRA0 MET 317 CONFLICT SEQADV 6V2F MET D 0 UNP B6DRA0 INITIATING METHIONINE SEQADV 6V2F CYS D 14 UNP B6DRA0 ALA 146 CONFLICT SEQADV 6V2F CYS D 45 UNP B6DRA0 GLU 177 CONFLICT SEQADV 6V2F ALA D 184 UNP B6DRA0 TRP 316 CONFLICT SEQADV 6V2F ALA D 185 UNP B6DRA0 MET 317 CONFLICT SEQADV 6V2F MET E 0 UNP B6DRA0 INITIATING METHIONINE SEQADV 6V2F CYS E 14 UNP B6DRA0 ALA 146 CONFLICT SEQADV 6V2F CYS E 45 UNP B6DRA0 GLU 177 CONFLICT SEQADV 6V2F ALA E 184 UNP B6DRA0 TRP 316 CONFLICT SEQADV 6V2F ALA E 185 UNP B6DRA0 MET 317 CONFLICT SEQADV 6V2F MET F 0 UNP B6DRA0 INITIATING METHIONINE SEQADV 6V2F CYS F 14 UNP B6DRA0 ALA 146 CONFLICT SEQADV 6V2F CYS F 45 UNP B6DRA0 GLU 177 CONFLICT SEQADV 6V2F ALA F 184 UNP B6DRA0 TRP 316 CONFLICT SEQADV 6V2F ALA F 185 UNP B6DRA0 MET 317 CONFLICT SEQRES 1 A 232 MET PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS SEQRES 2 A 232 GLN CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS SEQRES 3 A 232 VAL VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO SEQRES 4 A 232 MET PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP SEQRES 5 A 232 LEU ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA SEQRES 6 A 232 ALA MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA SEQRES 7 A 232 ALA GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO SEQRES 8 A 232 ILE ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP SEQRES 9 A 232 ILE ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY SEQRES 10 A 232 TRP MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE SEQRES 11 A 232 TYR LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL SEQRES 12 A 232 ARG MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN SEQRES 13 A 232 GLY PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE SEQRES 14 A 232 TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL SEQRES 15 A 232 LYS ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA SEQRES 16 A 232 ASN PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO SEQRES 17 A 232 GLY ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY SEQRES 18 A 232 VAL GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 B 232 MET PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS SEQRES 2 B 232 GLN CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS SEQRES 3 B 232 VAL VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO SEQRES 4 B 232 MET PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP SEQRES 5 B 232 LEU ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA SEQRES 6 B 232 ALA MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA SEQRES 7 B 232 ALA GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO SEQRES 8 B 232 ILE ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP SEQRES 9 B 232 ILE ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY SEQRES 10 B 232 TRP MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE SEQRES 11 B 232 TYR LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL SEQRES 12 B 232 ARG MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN SEQRES 13 B 232 GLY PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE SEQRES 14 B 232 TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL SEQRES 15 B 232 LYS ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA SEQRES 16 B 232 ASN PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO SEQRES 17 B 232 GLY ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY SEQRES 18 B 232 VAL GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 C 232 MET PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS SEQRES 2 C 232 GLN CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS SEQRES 3 C 232 VAL VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO SEQRES 4 C 232 MET PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP SEQRES 5 C 232 LEU ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA SEQRES 6 C 232 ALA MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA SEQRES 7 C 232 ALA GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO SEQRES 8 C 232 ILE ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP SEQRES 9 C 232 ILE ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY SEQRES 10 C 232 TRP MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE SEQRES 11 C 232 TYR LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL SEQRES 12 C 232 ARG MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN SEQRES 13 C 232 GLY PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE SEQRES 14 C 232 TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL SEQRES 15 C 232 LYS ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA SEQRES 16 C 232 ASN PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO SEQRES 17 C 232 GLY ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY SEQRES 18 C 232 VAL GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 D 232 MET PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS SEQRES 2 D 232 GLN CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS SEQRES 3 D 232 VAL VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO SEQRES 4 D 232 MET PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP SEQRES 5 D 232 LEU ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA SEQRES 6 D 232 ALA MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA SEQRES 7 D 232 ALA GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO SEQRES 8 D 232 ILE ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP SEQRES 9 D 232 ILE ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY SEQRES 10 D 232 TRP MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE SEQRES 11 D 232 TYR LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL SEQRES 12 D 232 ARG MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN SEQRES 13 D 232 GLY PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE SEQRES 14 D 232 TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL SEQRES 15 D 232 LYS ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA SEQRES 16 D 232 ASN PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO SEQRES 17 D 232 GLY ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY SEQRES 18 D 232 VAL GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 E 232 MET PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS SEQRES 2 E 232 GLN CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS SEQRES 3 E 232 VAL VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO SEQRES 4 E 232 MET PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP SEQRES 5 E 232 LEU ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA SEQRES 6 E 232 ALA MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA SEQRES 7 E 232 ALA GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO SEQRES 8 E 232 ILE ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP SEQRES 9 E 232 ILE ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY SEQRES 10 E 232 TRP MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE SEQRES 11 E 232 TYR LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL SEQRES 12 E 232 ARG MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN SEQRES 13 E 232 GLY PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE SEQRES 14 E 232 TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL SEQRES 15 E 232 LYS ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA SEQRES 16 E 232 ASN PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO SEQRES 17 E 232 GLY ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY SEQRES 18 E 232 VAL GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 F 232 MET PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS SEQRES 2 F 232 GLN CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS SEQRES 3 F 232 VAL VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO SEQRES 4 F 232 MET PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP SEQRES 5 F 232 LEU ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA SEQRES 6 F 232 ALA MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA SEQRES 7 F 232 ALA GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO SEQRES 8 F 232 ILE ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP SEQRES 9 F 232 ILE ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY SEQRES 10 F 232 TRP MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE SEQRES 11 F 232 TYR LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL SEQRES 12 F 232 ARG MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN SEQRES 13 F 232 GLY PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE SEQRES 14 F 232 TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL SEQRES 15 F 232 LYS ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA SEQRES 16 F 232 ASN PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO SEQRES 17 F 232 GLY ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY SEQRES 18 F 232 VAL GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU HET QNG A 300 64 HET QNG B 300 64 HET QNG C 300 64 HET QNG D 300 64 HET QNG E 300 64 HET QNG F 300 64 HETNAM QNG N-[(1S)-1-(3-{4-CHLORO-3-[(METHYLSULFONYL)AMINO]-1-(2, HETNAM 2 QNG 2,2-TRIFLUOROETHYL)-1H-INDAZOL-7-YL}-6-[3-METHYL-3- HETNAM 3 QNG (METHYLSULFONYL)BUT-1-YN-1-YL]PYRIDIN-2-YL)-2-(3,5- HETNAM 4 QNG DIFLUOROPHENYL)ETHYL]-2-[(3BS,4AR)-5,5-DIFLUORO-3- HETNAM 5 QNG (TRIFLUOROMETHYL)-3B,4,4A,5-TETRAHYDRO-1H- HETNAM 6 QNG CYCLOPROPA[3,4]CYCLOPENTA[1,2-C]PYRAZOL-1-YL]ACETAMIDE HETSYN QNG LENACAPAVIR FORMUL 7 QNG 6(C39 H32 CL F10 N7 O5 S2) FORMUL 13 HOH *851(H2 O) HELIX 1 AA1 SER A 16 ALA A 31 1 16 HELIX 2 AA2 GLU A 35 SER A 44 1 10 HELIX 3 AA3 THR A 48 THR A 58 1 11 HELIX 4 AA4 HIS A 62 HIS A 84 1 23 HELIX 5 AA5 ARG A 100 ALA A 105 1 6 HELIX 6 AA6 THR A 110 HIS A 120 1 11 HELIX 7 AA7 PRO A 125 SER A 146 1 22 HELIX 8 AA8 SER A 149 ILE A 153 5 5 HELIX 9 AA9 PRO A 160 GLU A 175 1 16 HELIX 10 AB1 SER A 178 LEU A 190 1 13 HELIX 11 AB2 ASN A 195 GLY A 206 1 12 HELIX 12 AB3 THR A 210 CYS A 218 1 9 HELIX 13 AB4 SER B 16 ALA B 31 1 16 HELIX 14 AB5 GLU B 35 SER B 44 1 10 HELIX 15 AB6 THR B 48 THR B 58 1 11 HELIX 16 AB7 HIS B 62 HIS B 84 1 23 HELIX 17 AB8 ARG B 100 ALA B 105 1 6 HELIX 18 AB9 THR B 110 HIS B 120 1 11 HELIX 19 AC1 PRO B 125 SER B 146 1 22 HELIX 20 AC2 SER B 149 ILE B 153 5 5 HELIX 21 AC3 PRO B 160 GLU B 175 1 16 HELIX 22 AC4 LEU B 189 ASN B 193 1 5 HELIX 23 AC5 ASN B 195 GLY B 206 1 12 HELIX 24 AC6 THR B 210 CYS B 218 1 9 HELIX 25 AC7 SER C 16 ALA C 31 1 16 HELIX 26 AC8 GLU C 35 SER C 44 1 10 HELIX 27 AC9 THR C 48 THR C 58 1 11 HELIX 28 AD1 HIS C 62 HIS C 84 1 23 HELIX 29 AD2 ARG C 100 ALA C 105 1 6 HELIX 30 AD3 THR C 110 HIS C 120 1 11 HELIX 31 AD4 PRO C 125 SER C 146 1 22 HELIX 32 AD5 SER C 149 ILE C 153 5 5 HELIX 33 AD6 PRO C 160 GLU C 175 1 16 HELIX 34 AD7 ASN C 195 GLY C 206 1 12 HELIX 35 AD8 THR C 210 CYS C 218 1 9 HELIX 36 AD9 SER D 16 ALA D 31 1 16 HELIX 37 AE1 GLU D 35 SER D 44 1 10 HELIX 38 AE2 THR D 48 THR D 58 1 11 HELIX 39 AE3 HIS D 62 HIS D 84 1 23 HELIX 40 AE4 ARG D 100 ALA D 105 1 6 HELIX 41 AE5 THR D 110 HIS D 120 1 11 HELIX 42 AE6 PRO D 125 SER D 146 1 22 HELIX 43 AE7 SER D 149 ILE D 153 5 5 HELIX 44 AE8 PRO D 160 GLU D 175 1 16 HELIX 45 AE9 SER D 178 LEU D 190 1 13 HELIX 46 AF1 VAL D 191 ALA D 194 5 4 HELIX 47 AF2 ASN D 195 GLY D 206 1 12 HELIX 48 AF3 THR D 210 CYS D 218 1 9 HELIX 49 AF4 SER E 16 ALA E 31 1 16 HELIX 50 AF5 GLU E 35 SER E 44 1 10 HELIX 51 AF6 THR E 48 THR E 58 1 11 HELIX 52 AF7 HIS E 62 HIS E 84 1 23 HELIX 53 AF8 ARG E 100 ALA E 105 1 6 HELIX 54 AF9 THR E 110 HIS E 120 1 11 HELIX 55 AG1 PRO E 125 TYR E 145 1 21 HELIX 56 AG2 SER E 149 ILE E 153 5 5 HELIX 57 AG3 PRO E 160 GLU E 175 1 16 HELIX 58 AG4 SER E 178 LEU E 190 1 13 HELIX 59 AG5 ASN E 195 GLY E 206 1 12 HELIX 60 AG6 THR E 210 CYS E 218 1 9 HELIX 61 AG7 SER F 16 ALA F 31 1 16 HELIX 62 AG8 GLU F 35 SER F 44 1 10 HELIX 63 AG9 THR F 48 THR F 58 1 11 HELIX 64 AH1 HIS F 62 HIS F 84 1 23 HELIX 65 AH2 ARG F 100 ALA F 105 1 6 HELIX 66 AH3 THR F 110 HIS F 120 1 11 HELIX 67 AH4 PRO F 125 TYR F 145 1 21 HELIX 68 AH5 SER F 149 ILE F 153 5 5 HELIX 69 AH6 PRO F 160 GLU F 175 1 16 HELIX 70 AH7 SER F 178 LEU F 190 1 13 HELIX 71 AH8 ASN F 195 GLY F 206 1 12 HELIX 72 AH9 THR F 210 CYS F 218 1 9 SHEET 1 AA1 2 ILE C 2 VAL C 3 0 SHEET 2 AA1 2 VAL C 11 HIS C 12 -1 O VAL C 11 N VAL C 3 SSBOND 1 CYS A 14 CYS B 45 1555 3554 2.04 SSBOND 2 CYS A 45 CYS B 14 1555 1554 2.04 SSBOND 3 CYS A 198 CYS A 218 1555 1555 2.03 SSBOND 4 CYS B 198 CYS B 218 1555 1555 2.04 SSBOND 5 CYS C 14 CYS D 45 1555 3564 2.02 SSBOND 6 CYS C 45 CYS D 14 1555 1554 2.05 SSBOND 7 CYS C 198 CYS C 218 1555 1555 2.03 SSBOND 8 CYS D 198 CYS D 218 1555 1555 2.04 SSBOND 9 CYS E 14 CYS F 45 1555 2655 2.03 SSBOND 10 CYS E 45 CYS F 14 1555 1555 2.03 SSBOND 11 CYS E 198 CYS E 218 1555 1555 2.03 SSBOND 12 CYS F 198 CYS F 218 1555 1555 2.03 CISPEP 1 ASN A 121 PRO A 122 0 -2.55 CISPEP 2 ASN B 121 PRO B 122 0 -2.78 CISPEP 3 ASN C 121 PRO C 122 0 -3.01 CISPEP 4 ASN D 121 PRO D 122 0 -0.92 CISPEP 5 ASN E 121 PRO E 122 0 -3.24 CISPEP 6 ASN F 121 PRO F 122 0 -3.13 SITE 1 AC1 19 ASN A 53 THR A 54 LEU A 56 ASN A 57 SITE 2 AC1 19 GLN A 63 MET A 66 GLN A 67 LEU A 69 SITE 3 AC1 19 LYS A 70 ILE A 73 ASN A 74 ALA A 105 SITE 4 AC1 19 THR A 107 TYR A 130 PRO B 38 SER B 41 SITE 5 AC1 19 TYR B 169 LEU B 172 ARG B 173 SITE 1 AC2 25 PRO A 38 SER A 41 TYR A 169 LEU A 172 SITE 2 AC2 25 ARG A 173 GLN A 179 LYS A 182 ASN A 183 SITE 3 AC2 25 HOH A 420 ASN B 53 THR B 54 LEU B 56 SITE 4 AC2 25 ASN B 57 GLN B 63 MET B 66 GLN B 67 SITE 5 AC2 25 LEU B 69 LYS B 70 ILE B 73 ASN B 74 SITE 6 AC2 25 ALA B 105 THR B 107 TYR B 130 HOH B 426 SITE 7 AC2 25 HOH B 539 SITE 1 AC3 24 ASN C 53 THR C 54 LEU C 56 ASN C 57 SITE 2 AC3 24 GLN C 63 MET C 66 GLN C 67 LEU C 69 SITE 3 AC3 24 LYS C 70 ILE C 73 ASN C 74 ALA C 105 SITE 4 AC3 24 THR C 107 TYR C 130 HOH C 503 PRO D 38 SITE 5 AC3 24 SER D 41 TYR D 169 LEU D 172 ARG D 173 SITE 6 AC3 24 GLN D 179 LYS D 182 ASN D 183 HOH D 449 SITE 1 AC4 19 PRO C 38 SER C 41 TYR C 169 LEU C 172 SITE 2 AC4 19 ARG C 173 ASN D 53 THR D 54 LEU D 56 SITE 3 AC4 19 ASN D 57 GLN D 63 MET D 66 GLN D 67 SITE 4 AC4 19 LEU D 69 LYS D 70 ILE D 73 ASN D 74 SITE 5 AC4 19 ALA D 105 THR D 107 TYR D 130 SITE 1 AC5 22 ASN E 53 THR E 54 LEU E 56 ASN E 57 SITE 2 AC5 22 GLN E 63 MET E 66 GLN E 67 LEU E 69 SITE 3 AC5 22 LYS E 70 ILE E 73 ASN E 74 ALA E 105 SITE 4 AC5 22 THR E 107 TYR E 130 PRO F 38 SER F 41 SITE 5 AC5 22 TYR F 169 LEU F 172 ARG F 173 GLN F 179 SITE 6 AC5 22 LYS F 182 ASN F 183 SITE 1 AC6 22 PRO E 38 SER E 41 TYR E 169 LEU E 172 SITE 2 AC6 22 ARG E 173 GLN E 179 LYS E 182 ASN E 183 SITE 3 AC6 22 ASN F 53 THR F 54 LEU F 56 ASN F 57 SITE 4 AC6 22 GLN F 63 MET F 66 GLN F 67 LEU F 69 SITE 5 AC6 22 LYS F 70 ILE F 73 ASN F 74 ALA F 105 SITE 6 AC6 22 THR F 107 TYR F 130 CRYST1 158.301 158.301 55.648 90.00 90.00 120.00 P 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006317 0.003647 0.000000 0.00000 SCALE2 0.000000 0.007294 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017970 0.00000