HEADER LYASE 26-NOV-19 6V3M TITLE CRYSTAL STRUCTURE OF 2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE TITLE 2 SYNTHASE (ISPF) BURKHOLDERIA PSEUDOMALLEI IN COMPOMPLEX WITH LIGAND TITLE 3 HGN-0961 (BSI110840) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: MECPS; COMPND 5 EC: 4.6.1.12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI (STRAIN 1710B); SOURCE 3 ORGANISM_TAXID: 320372; SOURCE 4 STRAIN: 1710B; SOURCE 5 GENE: ISPF, BURPS1710B_2511; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, BURKHOLDERIA PSEUDOMALLEI, 2-C-METHYL-D- KEYWDS 3 ERYTHRITOL 2, 4-CYCLODIPHOSPHATE SYNTHASE, HGN-0961, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 11-OCT-23 6V3M 1 REMARK REVDAT 1 09-DEC-20 6V3M 0 JRNL AUTH J.ABENDROTH,J.K.YANO,P.G.PIERCE,J.R.HORN,T.J.HAGEN, JRNL AUTH 2 P.S.HORANYI,D.D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF 2C-METHYL-D-ERYTHRITOL JRNL TITL 2 2,4-CYCLODIPHOSPHATE SYNTHASE (ISPF) BURKHOLDERIA JRNL TITL 3 PSEUDOMALLEI IN COMPOMPLEX WITH LIGAND HGN-0961 (BSI110840) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 67208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1897 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.3900 - 3.7400 1.00 4843 143 0.1334 0.1582 REMARK 3 2 3.7300 - 2.9600 1.00 4801 120 0.1365 0.1673 REMARK 3 3 2.9600 - 2.5900 1.00 4744 145 0.1477 0.1590 REMARK 3 4 2.5900 - 2.3500 1.00 4738 145 0.1449 0.1635 REMARK 3 5 2.3500 - 2.1800 1.00 4709 128 0.1457 0.1624 REMARK 3 6 2.1800 - 2.0600 1.00 4722 144 0.1430 0.1790 REMARK 3 7 2.0600 - 1.9500 1.00 4739 136 0.1489 0.1642 REMARK 3 8 1.9500 - 1.8700 1.00 4726 137 0.1532 0.1928 REMARK 3 9 1.8700 - 1.8000 0.99 4682 147 0.1510 0.1757 REMARK 3 10 1.8000 - 1.7300 0.98 4638 122 0.1517 0.1900 REMARK 3 11 1.7300 - 1.6800 0.97 4593 135 0.1572 0.1765 REMARK 3 12 1.6800 - 1.6300 0.96 4530 137 0.1534 0.1688 REMARK 3 13 1.6300 - 1.5900 0.95 4452 123 0.1659 0.2186 REMARK 3 14 1.5900 - 1.5500 0.93 4394 135 0.1964 0.2236 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.134 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.469 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3747 REMARK 3 ANGLE : 1.169 5105 REMARK 3 CHIRALITY : 0.076 583 REMARK 3 PLANARITY : 0.007 684 REMARK 3 DIHEDRAL : 20.195 1356 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 22 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7275 -37.7975 -14.8960 REMARK 3 T TENSOR REMARK 3 T11: 0.0841 T22: 0.0969 REMARK 3 T33: 0.0850 T12: 0.0063 REMARK 3 T13: -0.0093 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 1.6036 L22: 0.9406 REMARK 3 L33: 1.8882 L12: -0.0261 REMARK 3 L13: -0.1172 L23: 0.4170 REMARK 3 S TENSOR REMARK 3 S11: 0.0411 S12: 0.1891 S13: 0.0983 REMARK 3 S21: -0.4280 S22: -0.0706 S23: -0.0637 REMARK 3 S31: -0.2212 S32: -0.0155 S33: -0.0180 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6722 -26.5091 -0.0892 REMARK 3 T TENSOR REMARK 3 T11: 0.1581 T22: 0.0931 REMARK 3 T33: 0.2769 T12: -0.0087 REMARK 3 T13: 0.0239 T23: -0.0435 REMARK 3 L TENSOR REMARK 3 L11: 1.0378 L22: 3.1984 REMARK 3 L33: 0.8738 L12: -0.0431 REMARK 3 L13: -0.5441 L23: 1.2855 REMARK 3 S TENSOR REMARK 3 S11: 0.1423 S12: -0.2887 S13: 0.7778 REMARK 3 S21: 0.2176 S22: -0.1763 S23: 0.4268 REMARK 3 S31: -0.1939 S32: 0.0253 S33: 0.0390 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8992 -31.7577 -11.6256 REMARK 3 T TENSOR REMARK 3 T11: 0.1079 T22: 0.0897 REMARK 3 T33: 0.1174 T12: 0.0030 REMARK 3 T13: 0.0046 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 1.7862 L22: 1.9582 REMARK 3 L33: 1.5706 L12: 0.0741 REMARK 3 L13: 0.0330 L23: 0.9728 REMARK 3 S TENSOR REMARK 3 S11: -0.0546 S12: 0.1571 S13: 0.3054 REMARK 3 S21: -0.1161 S22: 0.0169 S23: 0.0898 REMARK 3 S31: -0.1997 S32: 0.0037 S33: 0.0508 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1950 -33.0847 -21.7067 REMARK 3 T TENSOR REMARK 3 T11: 0.2131 T22: 0.2725 REMARK 3 T33: 0.1537 T12: 0.0132 REMARK 3 T13: 0.0093 T23: 0.0799 REMARK 3 L TENSOR REMARK 3 L11: 5.1542 L22: 7.9265 REMARK 3 L33: 5.4955 L12: -0.5845 REMARK 3 L13: 0.3158 L23: -0.6076 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: 0.4558 S13: 0.6216 REMARK 3 S21: -0.0064 S22: -0.0105 S23: 0.0626 REMARK 3 S31: -0.7577 S32: -0.3209 S33: 0.0285 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9832 -25.6122 -12.9622 REMARK 3 T TENSOR REMARK 3 T11: 0.3998 T22: 0.3970 REMARK 3 T33: 0.4488 T12: 0.0963 REMARK 3 T13: -0.0931 T23: 0.1824 REMARK 3 L TENSOR REMARK 3 L11: 1.0530 L22: 4.9212 REMARK 3 L33: 3.6973 L12: -2.2627 REMARK 3 L13: 1.1851 L23: -2.4341 REMARK 3 S TENSOR REMARK 3 S11: -0.1235 S12: 0.8533 S13: 0.7843 REMARK 3 S21: -0.8270 S22: 0.1808 S23: 1.1958 REMARK 3 S31: -0.4796 S32: -1.2116 S33: -0.1448 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8087 -40.4664 -10.5129 REMARK 3 T TENSOR REMARK 3 T11: 0.0880 T22: 0.0650 REMARK 3 T33: 0.0443 T12: -0.0024 REMARK 3 T13: 0.0050 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 1.8258 L22: 1.2211 REMARK 3 L33: 1.0702 L12: 0.2678 REMARK 3 L13: -0.0563 L23: 0.2249 REMARK 3 S TENSOR REMARK 3 S11: 0.0521 S12: 0.1276 S13: 0.0278 REMARK 3 S21: -0.0240 S22: 0.0079 S23: -0.0424 REMARK 3 S31: 0.0271 S32: -0.1033 S33: -0.0510 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5692 -40.7415 -0.2064 REMARK 3 T TENSOR REMARK 3 T11: 0.1300 T22: 0.1002 REMARK 3 T33: 0.0965 T12: 0.0141 REMARK 3 T13: 0.0032 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 2.1767 L22: 2.5662 REMARK 3 L33: 2.0759 L12: 0.5529 REMARK 3 L13: 0.1769 L23: 0.8620 REMARK 3 S TENSOR REMARK 3 S11: 0.0441 S12: -0.1277 S13: -0.1144 REMARK 3 S21: 0.1942 S22: 0.0455 S23: -0.1852 REMARK 3 S31: 0.0627 S32: 0.1722 S33: -0.0924 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7952 -50.9583 -4.3112 REMARK 3 T TENSOR REMARK 3 T11: 0.1775 T22: 0.0746 REMARK 3 T33: 0.1090 T12: -0.0129 REMARK 3 T13: 0.0116 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 4.7478 L22: 6.4936 REMARK 3 L33: 3.1303 L12: 1.5677 REMARK 3 L13: -0.7344 L23: 0.0569 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: -0.1405 S13: -0.4473 REMARK 3 S21: 0.1441 S22: 0.1136 S23: 0.1373 REMARK 3 S31: 0.3979 S32: -0.1346 S33: -0.0979 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0028 -35.5885 -3.0896 REMARK 3 T TENSOR REMARK 3 T11: 0.1153 T22: 0.0785 REMARK 3 T33: 0.1268 T12: -0.0012 REMARK 3 T13: -0.0194 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 4.5797 L22: 5.8594 REMARK 3 L33: 1.0797 L12: 4.3794 REMARK 3 L13: -0.5940 L23: -0.6685 REMARK 3 S TENSOR REMARK 3 S11: 0.1257 S12: -0.1954 S13: 0.0045 REMARK 3 S21: 0.1854 S22: -0.1881 S23: -0.2205 REMARK 3 S31: -0.0771 S32: 0.1672 S33: 0.0194 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0389 -22.6208 -6.9884 REMARK 3 T TENSOR REMARK 3 T11: 0.1644 T22: 0.1119 REMARK 3 T33: 0.2657 T12: -0.0353 REMARK 3 T13: -0.0164 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 2.9067 L22: 3.5295 REMARK 3 L33: 2.6725 L12: 1.7537 REMARK 3 L13: 0.1926 L23: -0.2993 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.0175 S13: 0.6276 REMARK 3 S21: -0.0306 S22: -0.0121 S23: 0.3861 REMARK 3 S31: -0.3804 S32: 0.2296 S33: 0.0053 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6841 -43.4711 -14.3420 REMARK 3 T TENSOR REMARK 3 T11: 0.0837 T22: 0.0881 REMARK 3 T33: 0.0452 T12: 0.0072 REMARK 3 T13: 0.0006 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 2.1219 L22: 4.7126 REMARK 3 L33: 2.5589 L12: -0.1855 REMARK 3 L13: -0.1858 L23: 0.6874 REMARK 3 S TENSOR REMARK 3 S11: 0.0497 S12: 0.2875 S13: -0.0916 REMARK 3 S21: -0.1654 S22: 0.0380 S23: -0.1078 REMARK 3 S31: 0.1543 S32: -0.0838 S33: -0.1052 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8355 -36.5320 -27.3588 REMARK 3 T TENSOR REMARK 3 T11: 0.0901 T22: 0.3745 REMARK 3 T33: 0.1045 T12: -0.0491 REMARK 3 T13: 0.0786 T23: 0.1055 REMARK 3 L TENSOR REMARK 3 L11: 1.4212 L22: 3.1406 REMARK 3 L33: 1.7843 L12: 0.5589 REMARK 3 L13: 0.2639 L23: -0.4124 REMARK 3 S TENSOR REMARK 3 S11: -0.1685 S12: 0.7392 S13: 0.0919 REMARK 3 S21: -0.0211 S22: 0.2481 S23: -0.4936 REMARK 3 S31: -0.2193 S32: 0.1689 S33: 0.1411 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7568 -34.7858 -29.6504 REMARK 3 T TENSOR REMARK 3 T11: 0.1678 T22: 0.4857 REMARK 3 T33: 0.1986 T12: -0.0203 REMARK 3 T13: 0.0189 T23: 0.1065 REMARK 3 L TENSOR REMARK 3 L11: 3.2098 L22: 4.0554 REMARK 3 L33: 1.3230 L12: -0.3145 REMARK 3 L13: 0.4146 L23: -0.2591 REMARK 3 S TENSOR REMARK 3 S11: -0.0691 S12: 0.8624 S13: 0.5752 REMARK 3 S21: -0.2481 S22: -0.0771 S23: -0.3945 REMARK 3 S31: -0.2000 S32: 0.3363 S33: 0.1177 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5869 -45.5212 -28.4681 REMARK 3 T TENSOR REMARK 3 T11: 0.2334 T22: 0.4821 REMARK 3 T33: 0.2821 T12: 0.0066 REMARK 3 T13: 0.0682 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 2.9958 L22: 3.2317 REMARK 3 L33: 4.0011 L12: 0.6868 REMARK 3 L13: -1.9295 L23: -0.9739 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: 0.6950 S13: 0.2013 REMARK 3 S21: -0.3309 S22: -0.0313 S23: -0.6841 REMARK 3 S31: -0.2329 S32: 0.5665 S33: 0.0459 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7081 -39.5252 -29.4244 REMARK 3 T TENSOR REMARK 3 T11: 0.1376 T22: 0.3865 REMARK 3 T33: 0.0781 T12: -0.0012 REMARK 3 T13: 0.0386 T23: 0.0426 REMARK 3 L TENSOR REMARK 3 L11: 1.9158 L22: 1.4768 REMARK 3 L33: 1.3176 L12: 0.0335 REMARK 3 L13: 0.4661 L23: -0.0137 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: 0.6840 S13: 0.1081 REMARK 3 S21: -0.2315 S22: 0.0313 S23: -0.0155 REMARK 3 S31: -0.0151 S32: 0.2342 S33: -0.0362 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 147 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1682 -45.9463 -23.1836 REMARK 3 T TENSOR REMARK 3 T11: 0.0947 T22: 0.2265 REMARK 3 T33: 0.0570 T12: 0.0257 REMARK 3 T13: -0.0026 T23: -0.0260 REMARK 3 L TENSOR REMARK 3 L11: 3.6799 L22: 4.4209 REMARK 3 L33: 2.5951 L12: 0.9925 REMARK 3 L13: -0.1599 L23: -2.0717 REMARK 3 S TENSOR REMARK 3 S11: 0.0608 S12: 0.4257 S13: -0.1976 REMARK 3 S21: -0.0394 S22: -0.0229 S23: 0.2110 REMARK 3 S31: 0.1841 S32: 0.2589 S33: -0.0110 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 0 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5552 -40.6927 -7.4824 REMARK 3 T TENSOR REMARK 3 T11: 0.1336 T22: 0.1118 REMARK 3 T33: 0.0945 T12: 0.0128 REMARK 3 T13: -0.0257 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.5771 L22: 4.1182 REMARK 3 L33: 0.8057 L12: 0.8800 REMARK 3 L13: -0.4117 L23: -0.0126 REMARK 3 S TENSOR REMARK 3 S11: 0.0664 S12: -0.1011 S13: 0.1956 REMARK 3 S21: 0.1522 S22: -0.0738 S23: -0.4387 REMARK 3 S31: -0.0258 S32: 0.1963 S33: -0.0126 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 34 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7460 -43.4446 -3.6243 REMARK 3 T TENSOR REMARK 3 T11: 0.1577 T22: 0.1276 REMARK 3 T33: 0.1387 T12: 0.0311 REMARK 3 T13: -0.0230 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 5.1647 L22: 4.0682 REMARK 3 L33: 1.0154 L12: 2.7749 REMARK 3 L13: -2.0257 L23: -1.5132 REMARK 3 S TENSOR REMARK 3 S11: 0.2567 S12: -0.3892 S13: 0.1735 REMARK 3 S21: 0.3638 S22: -0.2087 S23: -0.1931 REMARK 3 S31: -0.1070 S32: 0.2239 S33: -0.0838 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 54 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2948 -45.5344 1.6560 REMARK 3 T TENSOR REMARK 3 T11: 0.2263 T22: 0.1454 REMARK 3 T33: 0.1598 T12: 0.0334 REMARK 3 T13: -0.0241 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 8.4245 L22: 6.1595 REMARK 3 L33: 5.1335 L12: 4.1366 REMARK 3 L13: 1.6489 L23: 0.7042 REMARK 3 S TENSOR REMARK 3 S11: -0.0767 S12: -0.4737 S13: 0.4971 REMARK 3 S21: 0.4233 S22: 0.0032 S23: 0.0066 REMARK 3 S31: -0.2926 S32: 0.2939 S33: 0.0192 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 63 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7392 -46.1273 8.8311 REMARK 3 T TENSOR REMARK 3 T11: 0.5508 T22: 0.5704 REMARK 3 T33: 0.4496 T12: -0.0135 REMARK 3 T13: -0.1114 T23: -0.0763 REMARK 3 L TENSOR REMARK 3 L11: 1.7170 L22: 2.2739 REMARK 3 L33: 3.1959 L12: 1.2139 REMARK 3 L13: 0.1762 L23: -0.2981 REMARK 3 S TENSOR REMARK 3 S11: 0.1685 S12: -1.8195 S13: 0.2852 REMARK 3 S21: 1.3967 S22: -0.2113 S23: -0.2911 REMARK 3 S31: -0.3151 S32: 0.5455 S33: -0.0409 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2837 -46.9003 -11.1760 REMARK 3 T TENSOR REMARK 3 T11: 0.1138 T22: 0.1237 REMARK 3 T33: 0.1353 T12: 0.0318 REMARK 3 T13: 0.0011 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.3063 L22: 2.0065 REMARK 3 L33: 1.0981 L12: 0.1220 REMARK 3 L13: 0.0114 L23: -0.4771 REMARK 3 S TENSOR REMARK 3 S11: -0.0174 S12: 0.1566 S13: -0.1119 REMARK 3 S21: -0.0954 S22: -0.0087 S23: -0.2271 REMARK 3 S31: 0.0796 S32: 0.1556 S33: 0.0393 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 147 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3193 -48.4234 -10.4844 REMARK 3 T TENSOR REMARK 3 T11: 0.0695 T22: 0.0619 REMARK 3 T33: 0.0853 T12: 0.0455 REMARK 3 T13: 0.0065 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 6.8192 L22: 6.6470 REMARK 3 L33: 2.4072 L12: 4.6998 REMARK 3 L13: 1.1961 L23: 1.0717 REMARK 3 S TENSOR REMARK 3 S11: -0.1030 S12: 0.1377 S13: -0.2536 REMARK 3 S21: -0.0504 S22: 0.1570 S23: -0.0818 REMARK 3 S31: 0.1493 S32: -0.0424 S33: -0.0533 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000245663. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67221 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 11.38 REMARK 200 R MERGE (I) : 0.02600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 49.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.57 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3QHD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BUPS122_OPT3 SCREEN: 100MM HEPES FREE REMARK 280 ACID / NAOH PH 7.4, 200MM AMMONIUM ACETATE, 27% (W/V) PEG 3350: REMARK 280 BUPSA.00122.A.A1.PW28612 AT 14.33MG/ML PLUS 1MM ZNCL2 AND 10MM REMARK 280 COMPOUND HGN-0961/BSI110840: SOAKED OVER NIGHT WITH RESERVOIR REMARK 280 AND 25MM COMPOUND: CRYO: 20% EG + SOAK BUFFER: TRAY 310506A10: REMARK 280 PUCK BNO0-4. THE LIGAND DESCRIPTION WAS GENERATED FROM A SMILES REMARK 280 STRING USING PHENIX ELBOW. THE LIGAND STRUCTURE WAS MINIMIZED REMARK 280 USING GAMESS WITH THE 3-21G BASIS. RESTRAINTS WERE EXTRACTED REMARK 280 USING PHENIX.ELBOW, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.65500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.77500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.65500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.77500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 427 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 431 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 467 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 327 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 ALA A 160 REMARK 465 ALA A 161 REMARK 465 ALA A 162 REMARK 465 MET B -20 REMARK 465 ALA B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 THR B -10 REMARK 465 LEU B -9 REMARK 465 GLU B -8 REMARK 465 ALA B -7 REMARK 465 GLN B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 ALA B 160 REMARK 465 ALA B 161 REMARK 465 ALA B 162 REMARK 465 MET C -20 REMARK 465 ALA C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 MET C -12 REMARK 465 GLY C -11 REMARK 465 THR C -10 REMARK 465 LEU C -9 REMARK 465 GLU C -8 REMARK 465 ALA C -7 REMARK 465 GLN C -6 REMARK 465 THR C -5 REMARK 465 GLN C -4 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 GLY C -1 REMARK 465 ALA C 160 REMARK 465 ALA C 161 REMARK 465 ALA C 162 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 ARG A 69 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 71 CG CD CE NZ REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 470 HIS B 36 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 65 CG OD1 OD2 REMARK 470 THR B 66 OG1 CG2 REMARK 470 ARG B 69 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 71 CG CD CE NZ REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 MET C 1 CG SD CE REMARK 470 GLU C 30 CG CD OE1 OE2 REMARK 470 HIS C 36 CG ND1 CD2 CE1 NE2 REMARK 470 ASP C 65 CG OD1 OD2 REMARK 470 THR C 66 OG1 CG2 REMARK 470 LYS C 71 CG CD CE NZ REMARK 470 LYS C 106 CG CD CE NZ REMARK 470 LYS C 138 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 324 O HOH C 421 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 29 146.84 -175.08 REMARK 500 SER A 37 -168.31 -77.90 REMARK 500 SER A 37 -168.31 -78.65 REMARK 500 SER B 37 -131.50 -73.84 REMARK 500 TYR C 29 147.93 -176.75 REMARK 500 SER C 37 -162.52 -76.65 REMARK 500 SER C 37 -167.56 -67.80 REMARK 500 SER C 64 69.59 163.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 441 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH C 442 DISTANCE = 6.69 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD2 REMARK 620 2 HIS A 12 NE2 101.9 REMARK 620 3 HIS A 44 ND1 102.7 113.6 REMARK 620 4 QOG A 202 O01 123.7 102.9 112.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 10 OD2 REMARK 620 2 HIS B 12 NE2 98.6 REMARK 620 3 HIS B 44 ND1 97.0 117.1 REMARK 620 4 QOG B 202 O01 128.0 106.3 110.3 REMARK 620 5 QOG B 202 S02 106.6 133.9 97.8 29.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 10 OD2 REMARK 620 2 HIS C 12 NE2 97.1 REMARK 620 3 HIS C 44 ND1 97.5 108.5 REMARK 620 4 QOG C 202 O01 122.9 106.9 121.1 REMARK 620 5 QOG C 202 S02 104.4 139.7 102.2 33.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QOG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLT A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QOG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QOG C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUPSA.00122.A RELATED DB: TARGETTRACK DBREF 6V3M A 1 162 UNP Q3JRA0 ISPF_BURP1 1 162 DBREF 6V3M B 1 162 UNP Q3JRA0 ISPF_BURP1 1 162 DBREF 6V3M C 1 162 UNP Q3JRA0 ISPF_BURP1 1 162 SEQADV 6V3M MET A -20 UNP Q3JRA0 INITIATING METHIONINE SEQADV 6V3M ALA A -19 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS A -18 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS A -17 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS A -16 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS A -15 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS A -14 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS A -13 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M MET A -12 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY A -11 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M THR A -10 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M LEU A -9 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLU A -8 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M ALA A -7 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLN A -6 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M THR A -5 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLN A -4 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY A -3 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M PRO A -2 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY A -1 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M SER A 0 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M MET B -20 UNP Q3JRA0 INITIATING METHIONINE SEQADV 6V3M ALA B -19 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS B -18 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS B -17 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS B -16 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS B -15 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS B -14 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS B -13 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M MET B -12 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY B -11 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M THR B -10 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M LEU B -9 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLU B -8 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M ALA B -7 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLN B -6 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M THR B -5 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLN B -4 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY B -3 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M PRO B -2 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY B -1 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M SER B 0 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M MET C -20 UNP Q3JRA0 INITIATING METHIONINE SEQADV 6V3M ALA C -19 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS C -18 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS C -17 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS C -16 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS C -15 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS C -14 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M HIS C -13 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M MET C -12 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY C -11 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M THR C -10 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M LEU C -9 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLU C -8 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M ALA C -7 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLN C -6 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M THR C -5 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLN C -4 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY C -3 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M PRO C -2 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M GLY C -1 UNP Q3JRA0 EXPRESSION TAG SEQADV 6V3M SER C 0 UNP Q3JRA0 EXPRESSION TAG SEQRES 1 A 183 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 183 ALA GLN THR GLN GLY PRO GLY SER MET ASP PHE ARG ILE SEQRES 3 A 183 GLY GLN GLY TYR ASP VAL HIS GLN LEU VAL PRO GLY ARG SEQRES 4 A 183 PRO LEU ILE ILE GLY GLY VAL THR ILE PRO TYR GLU ARG SEQRES 5 A 183 GLY LEU LEU GLY HIS SER ASP ALA ASP VAL LEU LEU HIS SEQRES 6 A 183 ALA ILE THR ASP ALA LEU PHE GLY ALA ALA ALA LEU GLY SEQRES 7 A 183 ASP ILE GLY ARG HIS PHE SER ASP THR ASP PRO ARG PHE SEQRES 8 A 183 LYS GLY ALA ASP SER ARG ALA LEU LEU ARG GLU CYS ALA SEQRES 9 A 183 SER ARG VAL ALA GLN ALA GLY PHE ALA ILE ARG ASN VAL SEQRES 10 A 183 ASP SER THR ILE ILE ALA GLN ALA PRO LYS LEU ALA PRO SEQRES 11 A 183 HIS ILE ASP ALA MET ARG ALA ASN ILE ALA ALA ASP LEU SEQRES 12 A 183 ASP LEU PRO LEU ASP ARG VAL ASN VAL LYS ALA LYS THR SEQRES 13 A 183 ASN GLU LYS LEU GLY TYR LEU GLY ARG GLY GLU GLY ILE SEQRES 14 A 183 GLU ALA GLN ALA ALA ALA LEU VAL VAL ARG GLU ALA ALA SEQRES 15 A 183 ALA SEQRES 1 B 183 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 B 183 ALA GLN THR GLN GLY PRO GLY SER MET ASP PHE ARG ILE SEQRES 3 B 183 GLY GLN GLY TYR ASP VAL HIS GLN LEU VAL PRO GLY ARG SEQRES 4 B 183 PRO LEU ILE ILE GLY GLY VAL THR ILE PRO TYR GLU ARG SEQRES 5 B 183 GLY LEU LEU GLY HIS SER ASP ALA ASP VAL LEU LEU HIS SEQRES 6 B 183 ALA ILE THR ASP ALA LEU PHE GLY ALA ALA ALA LEU GLY SEQRES 7 B 183 ASP ILE GLY ARG HIS PHE SER ASP THR ASP PRO ARG PHE SEQRES 8 B 183 LYS GLY ALA ASP SER ARG ALA LEU LEU ARG GLU CYS ALA SEQRES 9 B 183 SER ARG VAL ALA GLN ALA GLY PHE ALA ILE ARG ASN VAL SEQRES 10 B 183 ASP SER THR ILE ILE ALA GLN ALA PRO LYS LEU ALA PRO SEQRES 11 B 183 HIS ILE ASP ALA MET ARG ALA ASN ILE ALA ALA ASP LEU SEQRES 12 B 183 ASP LEU PRO LEU ASP ARG VAL ASN VAL LYS ALA LYS THR SEQRES 13 B 183 ASN GLU LYS LEU GLY TYR LEU GLY ARG GLY GLU GLY ILE SEQRES 14 B 183 GLU ALA GLN ALA ALA ALA LEU VAL VAL ARG GLU ALA ALA SEQRES 15 B 183 ALA SEQRES 1 C 183 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 C 183 ALA GLN THR GLN GLY PRO GLY SER MET ASP PHE ARG ILE SEQRES 3 C 183 GLY GLN GLY TYR ASP VAL HIS GLN LEU VAL PRO GLY ARG SEQRES 4 C 183 PRO LEU ILE ILE GLY GLY VAL THR ILE PRO TYR GLU ARG SEQRES 5 C 183 GLY LEU LEU GLY HIS SER ASP ALA ASP VAL LEU LEU HIS SEQRES 6 C 183 ALA ILE THR ASP ALA LEU PHE GLY ALA ALA ALA LEU GLY SEQRES 7 C 183 ASP ILE GLY ARG HIS PHE SER ASP THR ASP PRO ARG PHE SEQRES 8 C 183 LYS GLY ALA ASP SER ARG ALA LEU LEU ARG GLU CYS ALA SEQRES 9 C 183 SER ARG VAL ALA GLN ALA GLY PHE ALA ILE ARG ASN VAL SEQRES 10 C 183 ASP SER THR ILE ILE ALA GLN ALA PRO LYS LEU ALA PRO SEQRES 11 C 183 HIS ILE ASP ALA MET ARG ALA ASN ILE ALA ALA ASP LEU SEQRES 12 C 183 ASP LEU PRO LEU ASP ARG VAL ASN VAL LYS ALA LYS THR SEQRES 13 C 183 ASN GLU LYS LEU GLY TYR LEU GLY ARG GLY GLU GLY ILE SEQRES 14 C 183 GLU ALA GLN ALA ALA ALA LEU VAL VAL ARG GLU ALA ALA SEQRES 15 C 183 ALA HET ZN A 201 1 HET QOG A 202 16 HET DMS A 203 4 HET DMS A 204 4 HET EDO A 205 4 HET MLT A 206 9 HET ZN B 201 1 HET QOG B 202 16 HET DMS B 203 4 HET DMS B 204 4 HET EDO B 205 4 HET ZN C 201 1 HET QOG C 202 16 HET DMS C 203 4 HET EDO C 204 4 HETNAM ZN ZINC ION HETNAM QOG 5-{[(PROPAN-2-YL)CARBAMOYL]AMINO}-1,3,4-THIADIAZOLE-2- HETNAM 2 QOG SULFONAMIDE HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM MLT D-MALATE HETSYN EDO ETHYLENE GLYCOL HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID FORMUL 4 ZN 3(ZN 2+) FORMUL 5 QOG 3(C6 H11 N5 O3 S2) FORMUL 6 DMS 5(C2 H6 O S) FORMUL 8 EDO 3(C2 H6 O2) FORMUL 9 MLT C4 H6 O5 FORMUL 19 HOH *465(H2 O) HELIX 1 AA1 ASP A 40 ALA A 54 1 15 HELIX 2 AA2 ASP A 58 PHE A 63 1 6 HELIX 3 AA3 ASP A 67 LYS A 71 5 5 HELIX 4 AA4 ASP A 74 ALA A 89 1 16 HELIX 5 AA5 LEU A 107 PRO A 109 5 3 HELIX 6 AA6 HIS A 110 ASP A 123 1 14 HELIX 7 AA7 PRO A 125 VAL A 129 5 5 HELIX 8 AA8 LEU A 139 ARG A 144 1 6 HELIX 9 AA9 ASP B 40 ALA B 54 1 15 HELIX 10 AB1 ASP B 58 PHE B 63 1 6 HELIX 11 AB2 ASP B 67 LYS B 71 5 5 HELIX 12 AB3 ASP B 74 ALA B 89 1 16 HELIX 13 AB4 LEU B 107 PRO B 109 5 3 HELIX 14 AB5 HIS B 110 ASP B 123 1 14 HELIX 15 AB6 PRO B 125 VAL B 129 5 5 HELIX 16 AB7 LEU B 139 ARG B 144 1 6 HELIX 17 AB8 ASP C 40 ALA C 54 1 15 HELIX 18 AB9 ASP C 58 PHE C 63 1 6 HELIX 19 AC1 ASP C 74 ALA C 89 1 16 HELIX 20 AC2 LEU C 107 PRO C 109 5 3 HELIX 21 AC3 HIS C 110 ASP C 123 1 14 HELIX 22 AC4 PRO C 125 VAL C 129 5 5 HELIX 23 AC5 LEU C 139 ARG C 144 1 6 SHEET 1 AA1 5 ARG A 31 LEU A 33 0 SHEET 2 AA1 5 PHE A 3 PRO A 16 -1 N VAL A 15 O GLY A 32 SHEET 3 AA1 5 GLY A 147 ARG A 158 -1 O ALA A 150 N ASP A 10 SHEET 4 AA1 5 PHE A 91 ILE A 101 -1 N ILE A 101 O GLU A 149 SHEET 5 AA1 5 LYS A 132 LYS A 134 1 O LYS A 132 N ILE A 100 SHEET 1 AA2 2 ILE A 21 ILE A 22 0 SHEET 2 AA2 2 VAL A 25 THR A 26 -1 O VAL A 25 N ILE A 22 SHEET 1 AA3 5 GLY B 32 LEU B 33 0 SHEET 2 AA3 5 PHE B 3 VAL B 15 -1 N VAL B 15 O GLY B 32 SHEET 3 AA3 5 GLY B 147 ARG B 158 -1 O ALA B 150 N ASP B 10 SHEET 4 AA3 5 PHE B 91 ILE B 101 -1 N ARG B 94 O LEU B 155 SHEET 5 AA3 5 LYS B 132 LYS B 134 1 O LYS B 132 N ILE B 100 SHEET 1 AA4 2 LEU B 20 ILE B 22 0 SHEET 2 AA4 2 VAL B 25 ILE B 27 -1 O ILE B 27 N LEU B 20 SHEET 1 AA5 5 ARG C 31 LEU C 33 0 SHEET 2 AA5 5 ASP C 2 PRO C 16 -1 N VAL C 15 O GLY C 32 SHEET 3 AA5 5 GLY C 147 ARG C 158 -1 O ARG C 158 N ASP C 2 SHEET 4 AA5 5 PHE C 91 ILE C 101 -1 N ARG C 94 O LEU C 155 SHEET 5 AA5 5 LYS C 132 LYS C 134 1 O LYS C 132 N ILE C 100 SHEET 1 AA6 2 LEU C 20 ILE C 22 0 SHEET 2 AA6 2 VAL C 25 ILE C 27 -1 O ILE C 27 N LEU C 20 LINK OD2 ASP A 10 ZN ZN A 201 1555 1555 1.97 LINK NE2 HIS A 12 ZN ZN A 201 1555 1555 2.05 LINK ND1 HIS A 44 ZN ZN A 201 1555 1555 2.06 LINK ZN ZN A 201 O01 QOG A 202 1555 1555 2.03 LINK OD2 ASP B 10 ZN ZN B 201 1555 1555 1.95 LINK NE2 HIS B 12 ZN ZN B 201 1555 1555 1.97 LINK ND1 HIS B 44 ZN ZN B 201 1555 1555 2.02 LINK ZN ZN B 201 O01 QOG B 202 1555 1555 2.00 LINK ZN ZN B 201 S02 QOG B 202 1555 1555 2.99 LINK OD2 ASP C 10 ZN ZN C 201 1555 1555 1.96 LINK NE2 HIS C 12 ZN ZN C 201 1555 1555 2.02 LINK ND1 HIS C 44 ZN ZN C 201 1555 1555 2.07 LINK ZN ZN C 201 O01 QOG C 202 1555 1555 1.92 LINK ZN ZN C 201 S02 QOG C 202 1555 1555 2.80 CISPEP 1 ALA A 104 PRO A 105 0 -7.10 CISPEP 2 ALA B 104 PRO B 105 0 -3.66 CISPEP 3 ALA C 104 PRO C 105 0 -4.83 SITE 1 AC1 4 ASP A 10 HIS A 12 HIS A 44 QOG A 202 SITE 1 AC2 18 ASP A 10 HIS A 12 HIS A 36 SER A 37 SITE 2 AC2 18 HIS A 44 ILE A 59 GLY A 60 PHE A 63 SITE 3 AC2 18 SER A 64 ASP A 65 PHE A 70 LEU A 78 SITE 4 AC2 18 ZN A 201 HOH A 355 HOH A 392 LYS B 134 SITE 5 AC2 18 HOH B 317 HOH B 338 SITE 1 AC3 8 ALA A 102 GLN A 103 PRO A 105 LYS A 106 SITE 2 AC3 8 LEU A 107 LYS A 134 THR A 135 HOH A 391 SITE 1 AC4 4 ASP A 123 LEU A 124 PRO A 125 HOH A 330 SITE 1 AC5 6 ALA A 92 ILE A 93 LEU A 122 ASP A 123 SITE 2 AC5 6 HOH A 305 HOH A 394 SITE 1 AC6 11 GLY A 140 TYR A 141 ARG A 144 HOH A 326 SITE 2 AC6 11 GLY B 140 TYR B 141 HOH B 378 ARG C 69 SITE 3 AC6 11 GLY C 140 TYR C 141 ARG C 144 SITE 1 AC7 4 ASP B 10 HIS B 12 HIS B 44 QOG B 202 SITE 1 AC8 12 ASP B 10 HIS B 12 SER B 37 HIS B 44 SITE 2 AC8 12 ILE B 59 GLY B 60 PHE B 63 PHE B 70 SITE 3 AC8 12 ZN B 201 HOH B 364 LYS C 134 HOH C 320 SITE 1 AC9 8 ALA B 102 GLN B 103 PRO B 105 LYS B 106 SITE 2 AC9 8 LEU B 107 LYS B 134 THR B 135 HOH B 313 SITE 1 AD1 6 ALA A 87 GLN A 88 GLY A 90 HOH A 438 SITE 2 AD1 6 LEU B 124 PRO B 125 SITE 1 AD2 7 ALA B 92 ILE B 93 LEU B 122 ASP B 123 SITE 2 AD2 7 LEU B 124 HOH B 304 HOH B 334 SITE 1 AD3 4 ASP C 10 HIS C 12 HIS C 44 QOG C 202 SITE 1 AD4 14 LYS A 134 GLU A 137 HOH A 308 HOH A 332 SITE 2 AD4 14 ASP C 10 HIS C 12 SER C 37 HIS C 44 SITE 3 AD4 14 ILE C 59 PHE C 63 PHE C 70 LEU C 78 SITE 4 AD4 14 ZN C 201 HOH C 360 SITE 1 AD5 7 ALA C 102 GLN C 103 PRO C 105 LYS C 106 SITE 2 AD5 7 LEU C 107 LYS C 134 THR C 135 SITE 1 AD6 3 ASP C 123 LEU C 124 PRO C 125 CRYST1 117.310 67.550 60.570 90.00 96.32 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008524 0.000000 0.000944 0.00000 SCALE2 0.000000 0.014804 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016611 0.00000