data_6V7M # _entry.id 6V7M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6V7M pdb_00006v7m 10.2210/pdb6v7m/pdb WWPDB D_1000245918 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6V7M _pdbx_database_status.recvd_initial_deposition_date 2019-12-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'McPherson, A.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0001-5123-6433 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_id_ASTM BBRCA9 _citation.journal_id_CSD 0146 _citation.journal_id_ISSN 1090-2104 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of a proteolytically cleaved, amino terminal domain of apolipoprotein E3.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2020.01.117 _citation.pdbx_database_id_PubMed 32081433 _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'McPherson, A.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6V7M _cell.details ? _cell.formula_units_Z ? _cell.length_a 41.330 _cell.length_a_esd ? _cell.length_b 54.450 _cell.length_b_esd ? _cell.length_c 86.670 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V7M _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Apolipoprotein E' 11812.354 1 ? ? 'UNP residues 1-100' ? 2 polymer man 'Apolipoprotein E' 9421.833 1 ? ? 'UNP residues 101-183' ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 82 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 Apo-E 2 Apo-E # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRA LMDETMKELKAYKSELEEQL ; ;MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRA LMDETMKELKAYKSELEEQL ; A ? 2 'polypeptide(L)' no no ;TPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVY QAG ; ;TPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVY QAG ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 VAL n 1 4 LEU n 1 5 TRP n 1 6 ALA n 1 7 ALA n 1 8 LEU n 1 9 LEU n 1 10 VAL n 1 11 THR n 1 12 PHE n 1 13 LEU n 1 14 ALA n 1 15 GLY n 1 16 CYS n 1 17 GLN n 1 18 ALA n 1 19 LYS n 1 20 VAL n 1 21 GLU n 1 22 GLN n 1 23 ALA n 1 24 VAL n 1 25 GLU n 1 26 THR n 1 27 GLU n 1 28 PRO n 1 29 GLU n 1 30 PRO n 1 31 GLU n 1 32 LEU n 1 33 ARG n 1 34 GLN n 1 35 GLN n 1 36 THR n 1 37 GLU n 1 38 TRP n 1 39 GLN n 1 40 SER n 1 41 GLY n 1 42 GLN n 1 43 ARG n 1 44 TRP n 1 45 GLU n 1 46 LEU n 1 47 ALA n 1 48 LEU n 1 49 GLY n 1 50 ARG n 1 51 PHE n 1 52 TRP n 1 53 ASP n 1 54 TYR n 1 55 LEU n 1 56 ARG n 1 57 TRP n 1 58 VAL n 1 59 GLN n 1 60 THR n 1 61 LEU n 1 62 SER n 1 63 GLU n 1 64 GLN n 1 65 VAL n 1 66 GLN n 1 67 GLU n 1 68 GLU n 1 69 LEU n 1 70 LEU n 1 71 SER n 1 72 SER n 1 73 GLN n 1 74 VAL n 1 75 THR n 1 76 GLN n 1 77 GLU n 1 78 LEU n 1 79 ARG n 1 80 ALA n 1 81 LEU n 1 82 MET n 1 83 ASP n 1 84 GLU n 1 85 THR n 1 86 MET n 1 87 LYS n 1 88 GLU n 1 89 LEU n 1 90 LYS n 1 91 ALA n 1 92 TYR n 1 93 LYS n 1 94 SER n 1 95 GLU n 1 96 LEU n 1 97 GLU n 1 98 GLU n 1 99 GLN n 1 100 LEU n 2 1 THR n 2 2 PRO n 2 3 VAL n 2 4 ALA n 2 5 GLU n 2 6 GLU n 2 7 THR n 2 8 ARG n 2 9 ALA n 2 10 ARG n 2 11 LEU n 2 12 SER n 2 13 LYS n 2 14 GLU n 2 15 LEU n 2 16 GLN n 2 17 ALA n 2 18 ALA n 2 19 GLN n 2 20 ALA n 2 21 ARG n 2 22 LEU n 2 23 GLY n 2 24 ALA n 2 25 ASP n 2 26 MET n 2 27 GLU n 2 28 ASP n 2 29 VAL n 2 30 CYS n 2 31 GLY n 2 32 ARG n 2 33 LEU n 2 34 VAL n 2 35 GLN n 2 36 TYR n 2 37 ARG n 2 38 GLY n 2 39 GLU n 2 40 VAL n 2 41 GLN n 2 42 ALA n 2 43 MET n 2 44 LEU n 2 45 GLY n 2 46 GLN n 2 47 SER n 2 48 THR n 2 49 GLU n 2 50 GLU n 2 51 LEU n 2 52 ARG n 2 53 VAL n 2 54 ARG n 2 55 LEU n 2 56 ALA n 2 57 SER n 2 58 HIS n 2 59 LEU n 2 60 ARG n 2 61 LYS n 2 62 LEU n 2 63 ARG n 2 64 LYS n 2 65 ARG n 2 66 LEU n 2 67 LEU n 2 68 ARG n 2 69 ASP n 2 70 ALA n 2 71 ASP n 2 72 ASP n 2 73 LEU n 2 74 GLN n 2 75 LYS n 2 76 ARG n 2 77 LEU n 2 78 ALA n 2 79 VAL n 2 80 TYR n 2 81 GLN n 2 82 ALA n 2 83 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 100 Human ? APOE ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 83 Human ? APOE ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP APOE_HUMAN P02649 ? 1 ;MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRA LMDETMKELKAYKSELEEQL ; 1 2 UNP APOE_HUMAN P02649 ? 2 ;TPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVY QAG ; 101 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6V7M A 1 ? 100 ? P02649 1 ? 100 ? -17 82 2 2 6V7M B 1 ? 83 ? P02649 101 ? 183 ? 83 165 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6V7M _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Crystallization was by sitting drop vapor diffusion in Cryschem plates at room temperature. Reservoirs were 16% to 18 % 2-methyl-2,4-pentanediol (MPD) buffered with 0.1 M sodium acetate at pH 5.8 and including 0.25% octyl-beta-D-1-thioglucopyranoside. The droplets were initial composed of equal amounts of the reservoir and an 8 mg/ml solution of the protein in 0.02 M ammonium carbonate. ; _exptl_crystal_grow.pdbx_pH_range '5.8 - 6.0' # _diffrn.ambient_environment ? _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.diffrn_id 1 _diffrn_detector.type SDMS _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 1993-06-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Supper graphite crystal' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'ENRAF-NONIUS FR571' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 28.0 _reflns.entry_id 6V7M _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 46.33 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11748 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 86 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.8 _reflns.pdbx_Rmerge_I_obs 0.241 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.240 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 3.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.277 _reflns.pdbx_Rpim_I_all 0.127 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half .968 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.01 _reflns_shell.d_res_low 2.06 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 207 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs .528 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all .747 _reflns_shell.pdbx_Rpim_I_all .528 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.096 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.7400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -1.9200 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.1900 _refine.B_iso_max 194.460 _refine.B_iso_mean 49.0840 _refine.B_iso_min 15.860 _refine.correlation_coeff_Fo_to_Fc 0.9560 _refine.correlation_coeff_Fo_to_Fc_free 0.9220 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6V7M _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 46.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10817 _refine.ls_number_reflns_R_free 572 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 82.8800 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2054 _refine.ls_R_factor_R_free 0.2598 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2025 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1NFN _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.2140 _refine.pdbx_overall_ESU_R_Free 0.1970 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 17.4140 _refine.overall_SU_ML 0.1930 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 46.0000 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1292 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 147 _refine_hist.pdbx_B_iso_mean_ligand 94.82 _refine_hist.pdbx_B_iso_mean_solvent 47.93 _refine_hist.pdbx_number_atoms_protein 1205 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.013 1250 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.000 0.018 1194 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.287 1.651 1682 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.208 1.585 2756 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.157 5.000 152 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.882 20.575 87 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.759 15.000 251 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.707 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.054 0.200 151 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 1402 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.000 0.020 284 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.0020 _refine_ls_shell.d_res_low 2.0540 _refine_ls_shell.number_reflns_all 185 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 11 _refine_ls_shell.number_reflns_R_work 174 _refine_ls_shell.percent_reflns_obs 18.7400 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4660 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.4410 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6V7M _struct.title 'Crystal structure of a proteolytically cleaved, amino terminal domain of apolipoprotein E3' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6V7M _struct_keywords.text 'proteolysis, Alzheimers, lipid, lipoprotein, lipids, disease, LIPID TRANSPORT' _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 42 ? GLN A 59 ? GLN A 24 GLN A 41 1 ? 18 HELX_P HELX_P2 AA2 SER A 62 ? SER A 71 ? SER A 44 SER A 53 1 ? 10 HELX_P HELX_P3 AA3 SER A 72 ? GLU A 97 ? SER A 54 GLU A 79 1 ? 26 HELX_P HELX_P4 AA4 ALA B 4 ? ARG B 10 ? ALA B 86 ARG B 92 1 ? 7 HELX_P HELX_P5 AA5 LEU B 11 ? MET B 43 ? LEU B 93 MET B 125 1 ? 33 HELX_P HELX_P6 AA6 THR B 48 ? ALA B 82 ? THR B 130 ALA B 164 1 ? 35 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id PO4 _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'binding site for residue PO4 A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TRP A 52 ? TRP A 34 . ? 1_555 ? 2 AC1 3 ARG A 56 ? ARG A 38 . ? 1_555 ? 3 AC1 3 GLU A 67 ? GLU A 49 . ? 4_466 ? # _atom_sites.entry_id 6V7M _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.024195 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018365 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011538 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -17 ? ? ? A . n A 1 2 LYS 2 -16 ? ? ? A . n A 1 3 VAL 3 -15 ? ? ? A . n A 1 4 LEU 4 -14 ? ? ? A . n A 1 5 TRP 5 -13 ? ? ? A . n A 1 6 ALA 6 -12 ? ? ? A . n A 1 7 ALA 7 -11 ? ? ? A . n A 1 8 LEU 8 -10 ? ? ? A . n A 1 9 LEU 9 -9 ? ? ? A . n A 1 10 VAL 10 -8 ? ? ? A . n A 1 11 THR 11 -7 ? ? ? A . n A 1 12 PHE 12 -6 ? ? ? A . n A 1 13 LEU 13 -5 ? ? ? A . n A 1 14 ALA 14 -4 ? ? ? A . n A 1 15 GLY 15 -3 ? ? ? A . n A 1 16 CYS 16 -2 ? ? ? A . n A 1 17 GLN 17 -1 ? ? ? A . n A 1 18 ALA 18 0 ? ? ? A . n A 1 19 LYS 19 1 ? ? ? A . n A 1 20 VAL 20 2 ? ? ? A . n A 1 21 GLU 21 3 ? ? ? A . n A 1 22 GLN 22 4 ? ? ? A . n A 1 23 ALA 23 5 ? ? ? A . n A 1 24 VAL 24 6 ? ? ? A . n A 1 25 GLU 25 7 ? ? ? A . n A 1 26 THR 26 8 ? ? ? A . n A 1 27 GLU 27 9 ? ? ? A . n A 1 28 PRO 28 10 ? ? ? A . n A 1 29 GLU 29 11 ? ? ? A . n A 1 30 PRO 30 12 ? ? ? A . n A 1 31 GLU 31 13 ? ? ? A . n A 1 32 LEU 32 14 ? ? ? A . n A 1 33 ARG 33 15 ? ? ? A . n A 1 34 GLN 34 16 ? ? ? A . n A 1 35 GLN 35 17 ? ? ? A . n A 1 36 THR 36 18 18 THR THR A . n A 1 37 GLU 37 19 19 GLU GLU A . n A 1 38 TRP 38 20 20 TRP TRP A . n A 1 39 GLN 39 21 21 GLN GLN A . n A 1 40 SER 40 22 22 SER SER A . n A 1 41 GLY 41 23 23 GLY GLY A . n A 1 42 GLN 42 24 24 GLN GLN A . n A 1 43 ARG 43 25 25 ARG ARG A . n A 1 44 TRP 44 26 26 TRP TRP A . n A 1 45 GLU 45 27 27 GLU GLU A . n A 1 46 LEU 46 28 28 LEU LEU A . n A 1 47 ALA 47 29 29 ALA ALA A . n A 1 48 LEU 48 30 30 LEU LEU A . n A 1 49 GLY 49 31 31 GLY GLY A . n A 1 50 ARG 50 32 32 ARG ARG A . n A 1 51 PHE 51 33 33 PHE PHE A . n A 1 52 TRP 52 34 34 TRP TRP A . n A 1 53 ASP 53 35 35 ASP ASP A . n A 1 54 TYR 54 36 36 TYR TYR A . n A 1 55 LEU 55 37 37 LEU LEU A . n A 1 56 ARG 56 38 38 ARG ARG A . n A 1 57 TRP 57 39 39 TRP TRP A . n A 1 58 VAL 58 40 40 VAL VAL A . n A 1 59 GLN 59 41 41 GLN GLN A . n A 1 60 THR 60 42 42 THR THR A . n A 1 61 LEU 61 43 43 LEU LEU A . n A 1 62 SER 62 44 44 SER SER A . n A 1 63 GLU 63 45 45 GLU GLU A . n A 1 64 GLN 64 46 46 GLN GLN A . n A 1 65 VAL 65 47 47 VAL VAL A . n A 1 66 GLN 66 48 48 GLN GLN A . n A 1 67 GLU 67 49 49 GLU GLU A . n A 1 68 GLU 68 50 50 GLU GLU A . n A 1 69 LEU 69 51 51 LEU LEU A . n A 1 70 LEU 70 52 52 LEU LEU A . n A 1 71 SER 71 53 53 SER SER A . n A 1 72 SER 72 54 54 SER SER A . n A 1 73 GLN 73 55 55 GLN GLN A . n A 1 74 VAL 74 56 56 VAL VAL A . n A 1 75 THR 75 57 57 THR THR A . n A 1 76 GLN 76 58 58 GLN GLN A . n A 1 77 GLU 77 59 59 GLU GLU A . n A 1 78 LEU 78 60 60 LEU LEU A . n A 1 79 ARG 79 61 61 ARG ARG A . n A 1 80 ALA 80 62 62 ALA ALA A . n A 1 81 LEU 81 63 63 LEU LEU A . n A 1 82 MET 82 64 64 MET MET A . n A 1 83 ASP 83 65 65 ASP ASP A . n A 1 84 GLU 84 66 66 GLU GLU A . n A 1 85 THR 85 67 67 THR THR A . n A 1 86 MET 86 68 68 MET MET A . n A 1 87 LYS 87 69 69 LYS LYS A . n A 1 88 GLU 88 70 70 GLU GLU A . n A 1 89 LEU 89 71 71 LEU LEU A . n A 1 90 LYS 90 72 72 LYS LYS A . n A 1 91 ALA 91 73 73 ALA ALA A . n A 1 92 TYR 92 74 74 TYR TYR A . n A 1 93 LYS 93 75 75 LYS LYS A . n A 1 94 SER 94 76 76 SER SER A . n A 1 95 GLU 95 77 77 GLU GLU A . n A 1 96 LEU 96 78 78 LEU LEU A . n A 1 97 GLU 97 79 79 GLU GLU A . n A 1 98 GLU 98 80 80 GLU GLU A . n A 1 99 GLN 99 81 81 GLN GLN A . n A 1 100 LEU 100 82 ? ? ? A . n B 2 1 THR 1 83 83 THR THR B . n B 2 2 PRO 2 84 84 PRO PRO B . n B 2 3 VAL 3 85 85 VAL VAL B . n B 2 4 ALA 4 86 86 ALA ALA B . n B 2 5 GLU 5 87 87 GLU GLU B . n B 2 6 GLU 6 88 88 GLU GLU B . n B 2 7 THR 7 89 89 THR THR B . n B 2 8 ARG 8 90 90 ARG ARG B . n B 2 9 ALA 9 91 91 ALA ALA B . n B 2 10 ARG 10 92 92 ARG ARG B . n B 2 11 LEU 11 93 93 LEU LEU B . n B 2 12 SER 12 94 94 SER SER B . n B 2 13 LYS 13 95 95 LYS LYS B . n B 2 14 GLU 14 96 96 GLU GLU B . n B 2 15 LEU 15 97 97 LEU LEU B . n B 2 16 GLN 16 98 98 GLN GLN B . n B 2 17 ALA 17 99 99 ALA ALA B . n B 2 18 ALA 18 100 100 ALA ALA B . n B 2 19 GLN 19 101 101 GLN GLN B . n B 2 20 ALA 20 102 102 ALA ALA B . n B 2 21 ARG 21 103 103 ARG ARG B . n B 2 22 LEU 22 104 104 LEU LEU B . n B 2 23 GLY 23 105 105 GLY GLY B . n B 2 24 ALA 24 106 106 ALA ALA B . n B 2 25 ASP 25 107 107 ASP ASP B . n B 2 26 MET 26 108 108 MET MET B . n B 2 27 GLU 27 109 109 GLU GLU B . n B 2 28 ASP 28 110 110 ASP ASP B . n B 2 29 VAL 29 111 111 VAL VAL B . n B 2 30 CYS 30 112 112 CYS CYS B . n B 2 31 GLY 31 113 113 GLY GLY B . n B 2 32 ARG 32 114 114 ARG ARG B . n B 2 33 LEU 33 115 115 LEU LEU B . n B 2 34 VAL 34 116 116 VAL VAL B . n B 2 35 GLN 35 117 117 GLN GLN B . n B 2 36 TYR 36 118 118 TYR TYR B . n B 2 37 ARG 37 119 119 ARG ARG B . n B 2 38 GLY 38 120 120 GLY GLY B . n B 2 39 GLU 39 121 121 GLU GLU B . n B 2 40 VAL 40 122 122 VAL VAL B . n B 2 41 GLN 41 123 123 GLN GLN B . n B 2 42 ALA 42 124 124 ALA ALA B . n B 2 43 MET 43 125 125 MET MET B . n B 2 44 LEU 44 126 126 LEU LEU B . n B 2 45 GLY 45 127 127 GLY GLY B . n B 2 46 GLN 46 128 128 GLN GLN B . n B 2 47 SER 47 129 129 SER SER B . n B 2 48 THR 48 130 130 THR THR B . n B 2 49 GLU 49 131 131 GLU GLU B . n B 2 50 GLU 50 132 132 GLU GLU B . n B 2 51 LEU 51 133 133 LEU LEU B . n B 2 52 ARG 52 134 134 ARG ARG B . n B 2 53 VAL 53 135 135 VAL VAL B . n B 2 54 ARG 54 136 136 ARG ARG B . n B 2 55 LEU 55 137 137 LEU LEU B . n B 2 56 ALA 56 138 138 ALA ALA B . n B 2 57 SER 57 139 139 SER SER B . n B 2 58 HIS 58 140 140 HIS HIS B . n B 2 59 LEU 59 141 141 LEU LEU B . n B 2 60 ARG 60 142 142 ARG ARG B . n B 2 61 LYS 61 143 143 LYS LYS B . n B 2 62 LEU 62 144 144 LEU LEU B . n B 2 63 ARG 63 145 145 ARG ARG B . n B 2 64 LYS 64 146 146 LYS LYS B . n B 2 65 ARG 65 147 147 ARG ARG B . n B 2 66 LEU 66 148 148 LEU LEU B . n B 2 67 LEU 67 149 149 LEU LEU B . n B 2 68 ARG 68 150 150 ARG ARG B . n B 2 69 ASP 69 151 151 ASP ASP B . n B 2 70 ALA 70 152 152 ALA ALA B . n B 2 71 ASP 71 153 153 ASP ASP B . n B 2 72 ASP 72 154 154 ASP ASP B . n B 2 73 LEU 73 155 155 LEU LEU B . n B 2 74 GLN 74 156 156 GLN GLN B . n B 2 75 LYS 75 157 157 LYS LYS B . n B 2 76 ARG 76 158 158 ARG ARG B . n B 2 77 LEU 77 159 159 LEU LEU B . n B 2 78 ALA 78 160 160 ALA ALA B . n B 2 79 VAL 79 161 161 VAL VAL B . n B 2 80 TYR 80 162 162 TYR TYR B . n B 2 81 GLN 81 163 163 GLN GLN B . n B 2 82 ALA 82 164 164 ALA ALA B . n B 2 83 GLY 83 165 165 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 1 401 401 PO4 PO4 A . D 4 HOH 1 501 212 HOH HOH A . D 4 HOH 2 502 281 HOH HOH A . D 4 HOH 3 503 17 HOH HOH A . D 4 HOH 4 504 223 HOH HOH A . D 4 HOH 5 505 350 HOH HOH A . D 4 HOH 6 506 225 HOH HOH A . D 4 HOH 7 507 218 HOH HOH A . D 4 HOH 8 508 3 HOH HOH A . D 4 HOH 9 509 280 HOH HOH A . D 4 HOH 10 510 266 HOH HOH A . D 4 HOH 11 511 284 HOH HOH A . D 4 HOH 12 512 302 HOH HOH A . D 4 HOH 13 513 2 HOH HOH A . D 4 HOH 14 514 4 HOH HOH A . D 4 HOH 15 515 261 HOH HOH A . D 4 HOH 16 516 278 HOH HOH A . D 4 HOH 17 517 204 HOH HOH A . D 4 HOH 18 518 201 HOH HOH A . D 4 HOH 19 519 206 HOH HOH A . D 4 HOH 20 520 240 HOH HOH A . D 4 HOH 21 521 220 HOH HOH A . D 4 HOH 22 522 328 HOH HOH A . D 4 HOH 23 523 346 HOH HOH A . D 4 HOH 24 524 216 HOH HOH A . D 4 HOH 25 525 236 HOH HOH A . D 4 HOH 26 526 320 HOH HOH A . D 4 HOH 27 527 274 HOH HOH A . D 4 HOH 28 528 330 HOH HOH A . D 4 HOH 29 529 275 HOH HOH A . D 4 HOH 30 530 246 HOH HOH A . D 4 HOH 31 531 244 HOH HOH A . D 4 HOH 32 532 7 HOH HOH A . D 4 HOH 33 533 324 HOH HOH A . D 4 HOH 34 534 252 HOH HOH A . D 4 HOH 35 535 29 HOH HOH A . D 4 HOH 36 536 28 HOH HOH A . D 4 HOH 37 537 293 HOH HOH A . D 4 HOH 38 538 304 HOH HOH A . D 4 HOH 39 539 251 HOH HOH A . D 4 HOH 40 540 342 HOH HOH A . D 4 HOH 41 541 24 HOH HOH A . D 4 HOH 42 542 42 HOH HOH A . D 4 HOH 43 543 26 HOH HOH A . D 4 HOH 44 544 22 HOH HOH A . D 4 HOH 45 545 287 HOH HOH A . E 4 HOH 1 501 33 HOH HOH B . E 4 HOH 2 502 345 HOH HOH B . E 4 HOH 3 503 271 HOH HOH B . E 4 HOH 4 504 30 HOH HOH B . E 4 HOH 5 505 16 HOH HOH B . E 4 HOH 6 506 200 HOH HOH B . E 4 HOH 7 507 305 HOH HOH B . E 4 HOH 8 508 202 HOH HOH B . E 4 HOH 9 509 231 HOH HOH B . E 4 HOH 10 510 203 HOH HOH B . E 4 HOH 11 511 39 HOH HOH B . E 4 HOH 12 512 207 HOH HOH B . E 4 HOH 13 513 205 HOH HOH B . E 4 HOH 14 514 259 HOH HOH B . E 4 HOH 15 515 35 HOH HOH B . E 4 HOH 16 516 344 HOH HOH B . E 4 HOH 17 517 247 HOH HOH B . E 4 HOH 18 518 292 HOH HOH B . E 4 HOH 19 519 254 HOH HOH B . E 4 HOH 20 520 267 HOH HOH B . E 4 HOH 21 521 228 HOH HOH B . E 4 HOH 22 522 226 HOH HOH B . E 4 HOH 23 523 34 HOH HOH B . E 4 HOH 24 524 253 HOH HOH B . E 4 HOH 25 525 209 HOH HOH B . E 4 HOH 26 526 23 HOH HOH B . E 4 HOH 27 527 296 HOH HOH B . E 4 HOH 28 528 318 HOH HOH B . E 4 HOH 29 529 235 HOH HOH B . E 4 HOH 30 530 27 HOH HOH B . E 4 HOH 31 531 44 HOH HOH B . E 4 HOH 32 532 36 HOH HOH B . E 4 HOH 33 533 272 HOH HOH B . E 4 HOH 34 534 45 HOH HOH B . E 4 HOH 35 535 41 HOH HOH B . E 4 HOH 36 536 276 HOH HOH B . E 4 HOH 37 537 40 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3260 ? 1 MORE -35 ? 1 'SSA (A^2)' 8900 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-03-11 2 'Structure model' 1 1 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 24.0876 _pdbx_refine_tls.origin_y 39.3224 _pdbx_refine_tls.origin_z 59.0140 _pdbx_refine_tls.T[1][1] 0.0376 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0064 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0165 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.1289 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0056 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0111 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 1.0419 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.4290 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -1.1919 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.9472 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.4546 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 1.3723 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0522 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0512 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0576 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.1852 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0121 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0825 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0542 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0902 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0643 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 18 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 401 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0253 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? SDMS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 6V7M _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 ALA _pdbx_validate_rmsd_bond.auth_seq_id_1 164 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 GLY _pdbx_validate_rmsd_bond.auth_seq_id_2 165 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.596 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.260 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 19 ? ? -104.92 -87.47 2 1 GLN A 21 ? ? -109.58 -154.34 3 1 SER A 22 ? ? -109.19 -160.54 4 1 VAL B 85 ? ? -111.28 74.13 5 1 ALA B 86 ? ? 75.90 102.12 6 1 LEU B 93 ? ? -140.24 -14.45 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 542 ? 6.60 . 2 1 O ? A HOH 543 ? 8.00 . 3 1 O ? A HOH 544 ? 8.82 . 4 1 O ? A HOH 545 ? 19.43 . 5 1 O ? B HOH 532 ? 5.83 . 6 1 O ? B HOH 533 ? 6.75 . 7 1 O ? B HOH 534 ? 8.56 . 8 1 O ? B HOH 535 ? 8.84 . 9 1 O ? B HOH 536 ? 9.00 . 10 1 O ? B HOH 537 ? 10.27 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -17 ? A MET 1 2 1 Y 1 A LYS -16 ? A LYS 2 3 1 Y 1 A VAL -15 ? A VAL 3 4 1 Y 1 A LEU -14 ? A LEU 4 5 1 Y 1 A TRP -13 ? A TRP 5 6 1 Y 1 A ALA -12 ? A ALA 6 7 1 Y 1 A ALA -11 ? A ALA 7 8 1 Y 1 A LEU -10 ? A LEU 8 9 1 Y 1 A LEU -9 ? A LEU 9 10 1 Y 1 A VAL -8 ? A VAL 10 11 1 Y 1 A THR -7 ? A THR 11 12 1 Y 1 A PHE -6 ? A PHE 12 13 1 Y 1 A LEU -5 ? A LEU 13 14 1 Y 1 A ALA -4 ? A ALA 14 15 1 Y 1 A GLY -3 ? A GLY 15 16 1 Y 1 A CYS -2 ? A CYS 16 17 1 Y 1 A GLN -1 ? A GLN 17 18 1 Y 1 A ALA 0 ? A ALA 18 19 1 Y 1 A LYS 1 ? A LYS 19 20 1 Y 1 A VAL 2 ? A VAL 20 21 1 Y 1 A GLU 3 ? A GLU 21 22 1 Y 1 A GLN 4 ? A GLN 22 23 1 Y 1 A ALA 5 ? A ALA 23 24 1 Y 1 A VAL 6 ? A VAL 24 25 1 Y 1 A GLU 7 ? A GLU 25 26 1 Y 1 A THR 8 ? A THR 26 27 1 Y 1 A GLU 9 ? A GLU 27 28 1 Y 1 A PRO 10 ? A PRO 28 29 1 Y 1 A GLU 11 ? A GLU 29 30 1 Y 1 A PRO 12 ? A PRO 30 31 1 Y 1 A GLU 13 ? A GLU 31 32 1 Y 1 A LEU 14 ? A LEU 32 33 1 Y 1 A ARG 15 ? A ARG 33 34 1 Y 1 A GLN 16 ? A GLN 34 35 1 Y 1 A GLN 17 ? A GLN 35 36 1 Y 1 A LEU 82 ? A LEU 100 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 CYS N N N N 57 CYS CA C N R 58 CYS C C N N 59 CYS O O N N 60 CYS CB C N N 61 CYS SG S N N 62 CYS OXT O N N 63 CYS H H N N 64 CYS H2 H N N 65 CYS HA H N N 66 CYS HB2 H N N 67 CYS HB3 H N N 68 CYS HG H N N 69 CYS HXT H N N 70 GLN N N N N 71 GLN CA C N S 72 GLN C C N N 73 GLN O O N N 74 GLN CB C N N 75 GLN CG C N N 76 GLN CD C N N 77 GLN OE1 O N N 78 GLN NE2 N N N 79 GLN OXT O N N 80 GLN H H N N 81 GLN H2 H N N 82 GLN HA H N N 83 GLN HB2 H N N 84 GLN HB3 H N N 85 GLN HG2 H N N 86 GLN HG3 H N N 87 GLN HE21 H N N 88 GLN HE22 H N N 89 GLN HXT H N N 90 GLU N N N N 91 GLU CA C N S 92 GLU C C N N 93 GLU O O N N 94 GLU CB C N N 95 GLU CG C N N 96 GLU CD C N N 97 GLU OE1 O N N 98 GLU OE2 O N N 99 GLU OXT O N N 100 GLU H H N N 101 GLU H2 H N N 102 GLU HA H N N 103 GLU HB2 H N N 104 GLU HB3 H N N 105 GLU HG2 H N N 106 GLU HG3 H N N 107 GLU HE2 H N N 108 GLU HXT H N N 109 GLY N N N N 110 GLY CA C N N 111 GLY C C N N 112 GLY O O N N 113 GLY OXT O N N 114 GLY H H N N 115 GLY H2 H N N 116 GLY HA2 H N N 117 GLY HA3 H N N 118 GLY HXT H N N 119 HIS N N N N 120 HIS CA C N S 121 HIS C C N N 122 HIS O O N N 123 HIS CB C N N 124 HIS CG C Y N 125 HIS ND1 N Y N 126 HIS CD2 C Y N 127 HIS CE1 C Y N 128 HIS NE2 N Y N 129 HIS OXT O N N 130 HIS H H N N 131 HIS H2 H N N 132 HIS HA H N N 133 HIS HB2 H N N 134 HIS HB3 H N N 135 HIS HD1 H N N 136 HIS HD2 H N N 137 HIS HE1 H N N 138 HIS HE2 H N N 139 HIS HXT H N N 140 HOH O O N N 141 HOH H1 H N N 142 HOH H2 H N N 143 LEU N N N N 144 LEU CA C N S 145 LEU C C N N 146 LEU O O N N 147 LEU CB C N N 148 LEU CG C N N 149 LEU CD1 C N N 150 LEU CD2 C N N 151 LEU OXT O N N 152 LEU H H N N 153 LEU H2 H N N 154 LEU HA H N N 155 LEU HB2 H N N 156 LEU HB3 H N N 157 LEU HG H N N 158 LEU HD11 H N N 159 LEU HD12 H N N 160 LEU HD13 H N N 161 LEU HD21 H N N 162 LEU HD22 H N N 163 LEU HD23 H N N 164 LEU HXT H N N 165 LYS N N N N 166 LYS CA C N S 167 LYS C C N N 168 LYS O O N N 169 LYS CB C N N 170 LYS CG C N N 171 LYS CD C N N 172 LYS CE C N N 173 LYS NZ N N N 174 LYS OXT O N N 175 LYS H H N N 176 LYS H2 H N N 177 LYS HA H N N 178 LYS HB2 H N N 179 LYS HB3 H N N 180 LYS HG2 H N N 181 LYS HG3 H N N 182 LYS HD2 H N N 183 LYS HD3 H N N 184 LYS HE2 H N N 185 LYS HE3 H N N 186 LYS HZ1 H N N 187 LYS HZ2 H N N 188 LYS HZ3 H N N 189 LYS HXT H N N 190 MET N N N N 191 MET CA C N S 192 MET C C N N 193 MET O O N N 194 MET CB C N N 195 MET CG C N N 196 MET SD S N N 197 MET CE C N N 198 MET OXT O N N 199 MET H H N N 200 MET H2 H N N 201 MET HA H N N 202 MET HB2 H N N 203 MET HB3 H N N 204 MET HG2 H N N 205 MET HG3 H N N 206 MET HE1 H N N 207 MET HE2 H N N 208 MET HE3 H N N 209 MET HXT H N N 210 PHE N N N N 211 PHE CA C N S 212 PHE C C N N 213 PHE O O N N 214 PHE CB C N N 215 PHE CG C Y N 216 PHE CD1 C Y N 217 PHE CD2 C Y N 218 PHE CE1 C Y N 219 PHE CE2 C Y N 220 PHE CZ C Y N 221 PHE OXT O N N 222 PHE H H N N 223 PHE H2 H N N 224 PHE HA H N N 225 PHE HB2 H N N 226 PHE HB3 H N N 227 PHE HD1 H N N 228 PHE HD2 H N N 229 PHE HE1 H N N 230 PHE HE2 H N N 231 PHE HZ H N N 232 PHE HXT H N N 233 PO4 P P N N 234 PO4 O1 O N N 235 PO4 O2 O N N 236 PO4 O3 O N N 237 PO4 O4 O N N 238 PRO N N N N 239 PRO CA C N S 240 PRO C C N N 241 PRO O O N N 242 PRO CB C N N 243 PRO CG C N N 244 PRO CD C N N 245 PRO OXT O N N 246 PRO H H N N 247 PRO HA H N N 248 PRO HB2 H N N 249 PRO HB3 H N N 250 PRO HG2 H N N 251 PRO HG3 H N N 252 PRO HD2 H N N 253 PRO HD3 H N N 254 PRO HXT H N N 255 SER N N N N 256 SER CA C N S 257 SER C C N N 258 SER O O N N 259 SER CB C N N 260 SER OG O N N 261 SER OXT O N N 262 SER H H N N 263 SER H2 H N N 264 SER HA H N N 265 SER HB2 H N N 266 SER HB3 H N N 267 SER HG H N N 268 SER HXT H N N 269 THR N N N N 270 THR CA C N S 271 THR C C N N 272 THR O O N N 273 THR CB C N R 274 THR OG1 O N N 275 THR CG2 C N N 276 THR OXT O N N 277 THR H H N N 278 THR H2 H N N 279 THR HA H N N 280 THR HB H N N 281 THR HG1 H N N 282 THR HG21 H N N 283 THR HG22 H N N 284 THR HG23 H N N 285 THR HXT H N N 286 TRP N N N N 287 TRP CA C N S 288 TRP C C N N 289 TRP O O N N 290 TRP CB C N N 291 TRP CG C Y N 292 TRP CD1 C Y N 293 TRP CD2 C Y N 294 TRP NE1 N Y N 295 TRP CE2 C Y N 296 TRP CE3 C Y N 297 TRP CZ2 C Y N 298 TRP CZ3 C Y N 299 TRP CH2 C Y N 300 TRP OXT O N N 301 TRP H H N N 302 TRP H2 H N N 303 TRP HA H N N 304 TRP HB2 H N N 305 TRP HB3 H N N 306 TRP HD1 H N N 307 TRP HE1 H N N 308 TRP HE3 H N N 309 TRP HZ2 H N N 310 TRP HZ3 H N N 311 TRP HH2 H N N 312 TRP HXT H N N 313 TYR N N N N 314 TYR CA C N S 315 TYR C C N N 316 TYR O O N N 317 TYR CB C N N 318 TYR CG C Y N 319 TYR CD1 C Y N 320 TYR CD2 C Y N 321 TYR CE1 C Y N 322 TYR CE2 C Y N 323 TYR CZ C Y N 324 TYR OH O N N 325 TYR OXT O N N 326 TYR H H N N 327 TYR H2 H N N 328 TYR HA H N N 329 TYR HB2 H N N 330 TYR HB3 H N N 331 TYR HD1 H N N 332 TYR HD2 H N N 333 TYR HE1 H N N 334 TYR HE2 H N N 335 TYR HH H N N 336 TYR HXT H N N 337 VAL N N N N 338 VAL CA C N S 339 VAL C C N N 340 VAL O O N N 341 VAL CB C N N 342 VAL CG1 C N N 343 VAL CG2 C N N 344 VAL OXT O N N 345 VAL H H N N 346 VAL H2 H N N 347 VAL HA H N N 348 VAL HB H N N 349 VAL HG11 H N N 350 VAL HG12 H N N 351 VAL HG13 H N N 352 VAL HG21 H N N 353 VAL HG22 H N N 354 VAL HG23 H N N 355 VAL HXT H N N 356 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 CYS N CA sing N N 54 CYS N H sing N N 55 CYS N H2 sing N N 56 CYS CA C sing N N 57 CYS CA CB sing N N 58 CYS CA HA sing N N 59 CYS C O doub N N 60 CYS C OXT sing N N 61 CYS CB SG sing N N 62 CYS CB HB2 sing N N 63 CYS CB HB3 sing N N 64 CYS SG HG sing N N 65 CYS OXT HXT sing N N 66 GLN N CA sing N N 67 GLN N H sing N N 68 GLN N H2 sing N N 69 GLN CA C sing N N 70 GLN CA CB sing N N 71 GLN CA HA sing N N 72 GLN C O doub N N 73 GLN C OXT sing N N 74 GLN CB CG sing N N 75 GLN CB HB2 sing N N 76 GLN CB HB3 sing N N 77 GLN CG CD sing N N 78 GLN CG HG2 sing N N 79 GLN CG HG3 sing N N 80 GLN CD OE1 doub N N 81 GLN CD NE2 sing N N 82 GLN NE2 HE21 sing N N 83 GLN NE2 HE22 sing N N 84 GLN OXT HXT sing N N 85 GLU N CA sing N N 86 GLU N H sing N N 87 GLU N H2 sing N N 88 GLU CA C sing N N 89 GLU CA CB sing N N 90 GLU CA HA sing N N 91 GLU C O doub N N 92 GLU C OXT sing N N 93 GLU CB CG sing N N 94 GLU CB HB2 sing N N 95 GLU CB HB3 sing N N 96 GLU CG CD sing N N 97 GLU CG HG2 sing N N 98 GLU CG HG3 sing N N 99 GLU CD OE1 doub N N 100 GLU CD OE2 sing N N 101 GLU OE2 HE2 sing N N 102 GLU OXT HXT sing N N 103 GLY N CA sing N N 104 GLY N H sing N N 105 GLY N H2 sing N N 106 GLY CA C sing N N 107 GLY CA HA2 sing N N 108 GLY CA HA3 sing N N 109 GLY C O doub N N 110 GLY C OXT sing N N 111 GLY OXT HXT sing N N 112 HIS N CA sing N N 113 HIS N H sing N N 114 HIS N H2 sing N N 115 HIS CA C sing N N 116 HIS CA CB sing N N 117 HIS CA HA sing N N 118 HIS C O doub N N 119 HIS C OXT sing N N 120 HIS CB CG sing N N 121 HIS CB HB2 sing N N 122 HIS CB HB3 sing N N 123 HIS CG ND1 sing Y N 124 HIS CG CD2 doub Y N 125 HIS ND1 CE1 doub Y N 126 HIS ND1 HD1 sing N N 127 HIS CD2 NE2 sing Y N 128 HIS CD2 HD2 sing N N 129 HIS CE1 NE2 sing Y N 130 HIS CE1 HE1 sing N N 131 HIS NE2 HE2 sing N N 132 HIS OXT HXT sing N N 133 HOH O H1 sing N N 134 HOH O H2 sing N N 135 LEU N CA sing N N 136 LEU N H sing N N 137 LEU N H2 sing N N 138 LEU CA C sing N N 139 LEU CA CB sing N N 140 LEU CA HA sing N N 141 LEU C O doub N N 142 LEU C OXT sing N N 143 LEU CB CG sing N N 144 LEU CB HB2 sing N N 145 LEU CB HB3 sing N N 146 LEU CG CD1 sing N N 147 LEU CG CD2 sing N N 148 LEU CG HG sing N N 149 LEU CD1 HD11 sing N N 150 LEU CD1 HD12 sing N N 151 LEU CD1 HD13 sing N N 152 LEU CD2 HD21 sing N N 153 LEU CD2 HD22 sing N N 154 LEU CD2 HD23 sing N N 155 LEU OXT HXT sing N N 156 LYS N CA sing N N 157 LYS N H sing N N 158 LYS N H2 sing N N 159 LYS CA C sing N N 160 LYS CA CB sing N N 161 LYS CA HA sing N N 162 LYS C O doub N N 163 LYS C OXT sing N N 164 LYS CB CG sing N N 165 LYS CB HB2 sing N N 166 LYS CB HB3 sing N N 167 LYS CG CD sing N N 168 LYS CG HG2 sing N N 169 LYS CG HG3 sing N N 170 LYS CD CE sing N N 171 LYS CD HD2 sing N N 172 LYS CD HD3 sing N N 173 LYS CE NZ sing N N 174 LYS CE HE2 sing N N 175 LYS CE HE3 sing N N 176 LYS NZ HZ1 sing N N 177 LYS NZ HZ2 sing N N 178 LYS NZ HZ3 sing N N 179 LYS OXT HXT sing N N 180 MET N CA sing N N 181 MET N H sing N N 182 MET N H2 sing N N 183 MET CA C sing N N 184 MET CA CB sing N N 185 MET CA HA sing N N 186 MET C O doub N N 187 MET C OXT sing N N 188 MET CB CG sing N N 189 MET CB HB2 sing N N 190 MET CB HB3 sing N N 191 MET CG SD sing N N 192 MET CG HG2 sing N N 193 MET CG HG3 sing N N 194 MET SD CE sing N N 195 MET CE HE1 sing N N 196 MET CE HE2 sing N N 197 MET CE HE3 sing N N 198 MET OXT HXT sing N N 199 PHE N CA sing N N 200 PHE N H sing N N 201 PHE N H2 sing N N 202 PHE CA C sing N N 203 PHE CA CB sing N N 204 PHE CA HA sing N N 205 PHE C O doub N N 206 PHE C OXT sing N N 207 PHE CB CG sing N N 208 PHE CB HB2 sing N N 209 PHE CB HB3 sing N N 210 PHE CG CD1 doub Y N 211 PHE CG CD2 sing Y N 212 PHE CD1 CE1 sing Y N 213 PHE CD1 HD1 sing N N 214 PHE CD2 CE2 doub Y N 215 PHE CD2 HD2 sing N N 216 PHE CE1 CZ doub Y N 217 PHE CE1 HE1 sing N N 218 PHE CE2 CZ sing Y N 219 PHE CE2 HE2 sing N N 220 PHE CZ HZ sing N N 221 PHE OXT HXT sing N N 222 PO4 P O1 doub N N 223 PO4 P O2 sing N N 224 PO4 P O3 sing N N 225 PO4 P O4 sing N N 226 PRO N CA sing N N 227 PRO N CD sing N N 228 PRO N H sing N N 229 PRO CA C sing N N 230 PRO CA CB sing N N 231 PRO CA HA sing N N 232 PRO C O doub N N 233 PRO C OXT sing N N 234 PRO CB CG sing N N 235 PRO CB HB2 sing N N 236 PRO CB HB3 sing N N 237 PRO CG CD sing N N 238 PRO CG HG2 sing N N 239 PRO CG HG3 sing N N 240 PRO CD HD2 sing N N 241 PRO CD HD3 sing N N 242 PRO OXT HXT sing N N 243 SER N CA sing N N 244 SER N H sing N N 245 SER N H2 sing N N 246 SER CA C sing N N 247 SER CA CB sing N N 248 SER CA HA sing N N 249 SER C O doub N N 250 SER C OXT sing N N 251 SER CB OG sing N N 252 SER CB HB2 sing N N 253 SER CB HB3 sing N N 254 SER OG HG sing N N 255 SER OXT HXT sing N N 256 THR N CA sing N N 257 THR N H sing N N 258 THR N H2 sing N N 259 THR CA C sing N N 260 THR CA CB sing N N 261 THR CA HA sing N N 262 THR C O doub N N 263 THR C OXT sing N N 264 THR CB OG1 sing N N 265 THR CB CG2 sing N N 266 THR CB HB sing N N 267 THR OG1 HG1 sing N N 268 THR CG2 HG21 sing N N 269 THR CG2 HG22 sing N N 270 THR CG2 HG23 sing N N 271 THR OXT HXT sing N N 272 TRP N CA sing N N 273 TRP N H sing N N 274 TRP N H2 sing N N 275 TRP CA C sing N N 276 TRP CA CB sing N N 277 TRP CA HA sing N N 278 TRP C O doub N N 279 TRP C OXT sing N N 280 TRP CB CG sing N N 281 TRP CB HB2 sing N N 282 TRP CB HB3 sing N N 283 TRP CG CD1 doub Y N 284 TRP CG CD2 sing Y N 285 TRP CD1 NE1 sing Y N 286 TRP CD1 HD1 sing N N 287 TRP CD2 CE2 doub Y N 288 TRP CD2 CE3 sing Y N 289 TRP NE1 CE2 sing Y N 290 TRP NE1 HE1 sing N N 291 TRP CE2 CZ2 sing Y N 292 TRP CE3 CZ3 doub Y N 293 TRP CE3 HE3 sing N N 294 TRP CZ2 CH2 doub Y N 295 TRP CZ2 HZ2 sing N N 296 TRP CZ3 CH2 sing Y N 297 TRP CZ3 HZ3 sing N N 298 TRP CH2 HH2 sing N N 299 TRP OXT HXT sing N N 300 TYR N CA sing N N 301 TYR N H sing N N 302 TYR N H2 sing N N 303 TYR CA C sing N N 304 TYR CA CB sing N N 305 TYR CA HA sing N N 306 TYR C O doub N N 307 TYR C OXT sing N N 308 TYR CB CG sing N N 309 TYR CB HB2 sing N N 310 TYR CB HB3 sing N N 311 TYR CG CD1 doub Y N 312 TYR CG CD2 sing Y N 313 TYR CD1 CE1 sing Y N 314 TYR CD1 HD1 sing N N 315 TYR CD2 CE2 doub Y N 316 TYR CD2 HD2 sing N N 317 TYR CE1 CZ doub Y N 318 TYR CE1 HE1 sing N N 319 TYR CE2 CZ sing Y N 320 TYR CE2 HE2 sing N N 321 TYR CZ OH sing N N 322 TYR OH HH sing N N 323 TYR OXT HXT sing N N 324 VAL N CA sing N N 325 VAL N H sing N N 326 VAL N H2 sing N N 327 VAL CA C sing N N 328 VAL CA CB sing N N 329 VAL CA HA sing N N 330 VAL C O doub N N 331 VAL C OXT sing N N 332 VAL CB CG1 sing N N 333 VAL CB CG2 sing N N 334 VAL CB HB sing N N 335 VAL CG1 HG11 sing N N 336 VAL CG1 HG12 sing N N 337 VAL CG1 HG13 sing N N 338 VAL CG2 HG21 sing N N 339 VAL CG2 HG22 sing N N 340 VAL CG2 HG23 sing N N 341 VAL OXT HXT sing N N 342 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHATE ION' PO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1NFN _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'prepared from natural source - human serum' #