HEADER VIRAL PROTEIN 09-DEC-19 6V7V TITLE STRUCTURE OF A PHAGE-ENCODED QUORUM SENSING ANTI-ACTIVATOR, AQS1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUORUM SENSING ANTI-ACTIVATOR AQS1; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS VIRUS DMS3; SOURCE 3 ORGANISM_TAXID: 389469; SOURCE 4 GENE: DMS3-3; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS PROPHAGE PROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.SHAH,T.F.MORAES,K.L.MAXWELL REVDAT 3 11-OCT-23 6V7V 1 REMARK REVDAT 2 30-JUN-21 6V7V 1 JRNL REVDAT 1 16-DEC-20 6V7V 0 JRNL AUTH M.SHAH,V.L.TAYLOR,D.BONA,Y.TSAO,S.Y.STANLEY, JRNL AUTH 2 S.M.PIMENTEL-ELARDO,M.MCCALLUM,J.BONDY-DENOMY,P.L.HOWELL, JRNL AUTH 3 J.R.NODWELL,A.R.DAVIDSON,T.F.MORAES,K.L.MAXWELL JRNL TITL A PHAGE-ENCODED ANTI-ACTIVATOR INHIBITS QUORUM SENSING IN JRNL TITL 2 PSEUDOMONAS AERUGINOSA. JRNL REF MOL.CELL V. 81 571 2021 JRNL REFN ISSN 1097-2765 JRNL PMID 33412111 JRNL DOI 10.1016/J.MOLCEL.2020.12.011 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 24440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1221 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1700 - 5.9100 0.99 2674 139 0.1681 0.2107 REMARK 3 2 5.9100 - 4.6900 1.00 2643 135 0.1764 0.1918 REMARK 3 3 4.6900 - 4.1000 1.00 2648 138 0.1622 0.1962 REMARK 3 4 4.1000 - 3.7300 0.99 2686 139 0.1667 0.2017 REMARK 3 5 3.7300 - 3.4600 1.00 2684 141 0.1820 0.2583 REMARK 3 6 3.4600 - 3.2500 0.99 2669 144 0.2107 0.2199 REMARK 3 7 3.2500 - 3.0900 0.99 2580 138 0.2278 0.2740 REMARK 3 8 3.0900 - 2.9600 0.99 2696 142 0.2268 0.2891 REMARK 3 9 2.9600 - 2.8400 0.99 2669 140 0.2328 0.2506 REMARK 3 10 2.8400 - 2.7500 0.99 2567 136 0.2382 0.2782 REMARK 3 11 2.7500 - 2.6600 0.98 2644 141 0.2324 0.2636 REMARK 3 12 2.6600 - 2.5800 0.99 2696 142 0.2448 0.2980 REMARK 3 13 2.5800 - 2.5200 0.99 2591 130 0.2380 0.2723 REMARK 3 14 2.5200 - 2.4500 0.98 2613 139 0.2708 0.3300 REMARK 3 15 2.4500 - 2.4000 0.98 2608 139 0.2711 0.3042 REMARK 3 16 2.4000 - 2.3500 0.98 2619 134 0.2705 0.3145 REMARK 3 17 2.3500 - 2.3000 0.98 2667 138 0.3057 0.3372 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.279 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2776 REMARK 3 ANGLE : 0.784 3777 REMARK 3 CHIRALITY : 0.039 446 REMARK 3 PLANARITY : 0.005 486 REMARK 3 DIHEDRAL : 8.111 1667 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:63) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8851 -36.7333 50.0664 REMARK 3 T TENSOR REMARK 3 T11: 0.2847 T22: 0.2495 REMARK 3 T33: 0.1597 T12: -0.0302 REMARK 3 T13: -0.0256 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 1.8961 L22: 4.9159 REMARK 3 L33: 4.6070 L12: 1.8762 REMARK 3 L13: -1.1089 L23: -2.6145 REMARK 3 S TENSOR REMARK 3 S11: 0.1581 S12: -0.1442 S13: 0.1272 REMARK 3 S21: 0.1459 S22: -0.2483 S23: -0.1094 REMARK 3 S31: -0.4945 S32: 0.4444 S33: 0.0593 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 1:62) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4988 -33.7521 39.2886 REMARK 3 T TENSOR REMARK 3 T11: 0.3383 T22: 0.2635 REMARK 3 T33: 0.1001 T12: -0.0374 REMARK 3 T13: -0.0005 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 7.5365 L22: 7.6117 REMARK 3 L33: 4.2877 L12: -2.8453 REMARK 3 L13: 1.2612 L23: -2.2382 REMARK 3 S TENSOR REMARK 3 S11: 0.0479 S12: 0.2478 S13: 0.0100 REMARK 3 S21: -0.1415 S22: -0.0813 S23: -0.0522 REMARK 3 S31: -0.0766 S32: 0.2289 S33: 0.0323 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN C AND RESID 1:62) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4406 -29.9547 25.5922 REMARK 3 T TENSOR REMARK 3 T11: 0.3690 T22: 0.2587 REMARK 3 T33: 0.1530 T12: 0.0069 REMARK 3 T13: -0.0027 T23: 0.0359 REMARK 3 L TENSOR REMARK 3 L11: 4.2718 L22: 4.5378 REMARK 3 L33: 3.2720 L12: -3.6552 REMARK 3 L13: -1.5583 L23: 1.2933 REMARK 3 S TENSOR REMARK 3 S11: -0.0257 S12: 0.1291 S13: -0.2321 REMARK 3 S21: 0.1370 S22: -0.0759 S23: 0.0258 REMARK 3 S31: 0.5080 S32: 0.1361 S33: 0.1005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN D AND RESID 2:62) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9111 -31.1923 14.7948 REMARK 3 T TENSOR REMARK 3 T11: 0.3062 T22: 0.2268 REMARK 3 T33: 0.1246 T12: 0.0364 REMARK 3 T13: 0.0004 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 7.5932 L22: 2.5647 REMARK 3 L33: 6.3795 L12: 0.1319 REMARK 3 L13: -3.3238 L23: 0.2733 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: 0.0789 S13: 0.1579 REMARK 3 S21: -0.0206 S22: 0.0570 S23: 0.0717 REMARK 3 S31: 0.3842 S32: -0.1734 S33: -0.0467 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN E AND RESID 1:62) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2442 -32.5617 1.2074 REMARK 3 T TENSOR REMARK 3 T11: 0.2966 T22: 0.2873 REMARK 3 T33: 0.1736 T12: 0.0210 REMARK 3 T13: 0.0171 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 3.0116 L22: 0.9535 REMARK 3 L33: 4.3936 L12: 1.2957 REMARK 3 L13: 1.5919 L23: 0.7935 REMARK 3 S TENSOR REMARK 3 S11: -0.2391 S12: -0.3851 S13: 0.1536 REMARK 3 S21: -0.0728 S22: 0.0499 S23: 0.1113 REMARK 3 S31: -0.1281 S32: -0.6807 S33: 0.1508 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN F AND RESID 2:62) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6342 -34.1843 -9.5160 REMARK 3 T TENSOR REMARK 3 T11: 0.2293 T22: 0.2657 REMARK 3 T33: 0.1061 T12: 0.0155 REMARK 3 T13: -0.0223 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 5.3662 L22: 5.4942 REMARK 3 L33: 6.6403 L12: 3.5917 REMARK 3 L13: 1.8684 L23: 2.2565 REMARK 3 S TENSOR REMARK 3 S11: -0.1584 S12: 0.0653 S13: -0.0431 REMARK 3 S21: 0.1214 S22: 0.2144 S23: -0.0996 REMARK 3 S31: -0.0710 S32: -0.0062 S33: -0.0220 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V7V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1000245782. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 105 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24477 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 45.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6V7U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRI-SODIUM CITRATE, PH 5.5, 15% REMARK 280 ETHANOL, 0.2M LITHIUM SULPHATE AND 15% GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.36500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.06000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.36500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.06000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 64 REMARK 465 GLY A 65 REMARK 465 GLY A 66 REMARK 465 ASP A 67 REMARK 465 HIS A 68 REMARK 465 GLU A 69 REMARK 465 THR B 29 REMARK 465 ASP B 30 REMARK 465 GLU B 31 REMARK 465 SER B 32 REMARK 465 THR B 33 REMARK 465 VAL B 34 REMARK 465 ALA B 63 REMARK 465 VAL B 64 REMARK 465 GLY B 65 REMARK 465 GLY B 66 REMARK 465 ASP B 67 REMARK 465 HIS B 68 REMARK 465 GLU B 69 REMARK 465 ALA C 63 REMARK 465 VAL C 64 REMARK 465 GLY C 65 REMARK 465 GLY C 66 REMARK 465 ASP C 67 REMARK 465 HIS C 68 REMARK 465 GLU C 69 REMARK 465 MET D 1 REMARK 465 THR D 29 REMARK 465 ASP D 30 REMARK 465 GLU D 31 REMARK 465 SER D 32 REMARK 465 THR D 33 REMARK 465 VAL D 34 REMARK 465 ALA D 63 REMARK 465 VAL D 64 REMARK 465 GLY D 65 REMARK 465 GLY D 66 REMARK 465 ASP D 67 REMARK 465 HIS D 68 REMARK 465 GLU D 69 REMARK 465 ALA E 63 REMARK 465 VAL E 64 REMARK 465 GLY E 65 REMARK 465 GLY E 66 REMARK 465 ASP E 67 REMARK 465 HIS E 68 REMARK 465 GLU E 69 REMARK 465 MET F 1 REMARK 465 THR F 29 REMARK 465 ASP F 30 REMARK 465 GLU F 31 REMARK 465 SER F 32 REMARK 465 THR F 33 REMARK 465 VAL F 34 REMARK 465 ALA F 63 REMARK 465 VAL F 64 REMARK 465 GLY F 65 REMARK 465 GLY F 66 REMARK 465 ASP F 67 REMARK 465 HIS F 68 REMARK 465 GLU F 69 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 61 NH1 NH2 REMARK 470 LYS A 62 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 61 NE ARG A 61 CZ 0.174 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 61 CD - NE - CZ ANGL. DEV. = -10.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG D 61 31.66 -87.51 REMARK 500 ARG F 61 73.05 -119.84 REMARK 500 REMARK 500 REMARK: NULL DBREF 6V7V A 1 69 UNP A0SML3 A0SML3_9CAUD 1 69 DBREF 6V7V B 1 69 UNP A0SML3 A0SML3_9CAUD 1 69 DBREF 6V7V C 1 69 UNP A0SML3 A0SML3_9CAUD 1 69 DBREF 6V7V D 1 69 UNP A0SML3 A0SML3_9CAUD 1 69 DBREF 6V7V E 1 69 UNP A0SML3 A0SML3_9CAUD 1 69 DBREF 6V7V F 1 69 UNP A0SML3 A0SML3_9CAUD 1 69 SEQADV 6V7V ALA A 24 UNP A0SML3 LYS 24 ENGINEERED MUTATION SEQADV 6V7V ALA A 25 UNP A0SML3 GLU 25 ENGINEERED MUTATION SEQADV 6V7V ALA B 24 UNP A0SML3 LYS 24 ENGINEERED MUTATION SEQADV 6V7V ALA B 25 UNP A0SML3 GLU 25 ENGINEERED MUTATION SEQADV 6V7V ALA C 24 UNP A0SML3 LYS 24 ENGINEERED MUTATION SEQADV 6V7V ALA C 25 UNP A0SML3 GLU 25 ENGINEERED MUTATION SEQADV 6V7V ALA D 24 UNP A0SML3 LYS 24 ENGINEERED MUTATION SEQADV 6V7V ALA D 25 UNP A0SML3 GLU 25 ENGINEERED MUTATION SEQADV 6V7V ALA E 24 UNP A0SML3 LYS 24 ENGINEERED MUTATION SEQADV 6V7V ALA E 25 UNP A0SML3 GLU 25 ENGINEERED MUTATION SEQADV 6V7V ALA F 24 UNP A0SML3 LYS 24 ENGINEERED MUTATION SEQADV 6V7V ALA F 25 UNP A0SML3 GLU 25 ENGINEERED MUTATION SEQRES 1 A 69 MET THR ASN THR ASP LEU LYS PRO LEU LEU ASP ASN LEU SEQRES 2 A 69 ARG ASN ALA THR GLU PHE TRP ASN LEU VAL ALA ALA ALA SEQRES 3 A 69 SER ALA THR ASP GLU SER THR VAL HIS ASN ARG SER TYR SEQRES 4 A 69 ARG ASP ALA LEU ASP TRP LEU GLU SER ALA ALA LEU ALA SEQRES 5 A 69 LEU GLY ASP ALA LEU ILE ALA GLN ARG LYS ALA VAL GLY SEQRES 6 A 69 GLY ASP HIS GLU SEQRES 1 B 69 MET THR ASN THR ASP LEU LYS PRO LEU LEU ASP ASN LEU SEQRES 2 B 69 ARG ASN ALA THR GLU PHE TRP ASN LEU VAL ALA ALA ALA SEQRES 3 B 69 SER ALA THR ASP GLU SER THR VAL HIS ASN ARG SER TYR SEQRES 4 B 69 ARG ASP ALA LEU ASP TRP LEU GLU SER ALA ALA LEU ALA SEQRES 5 B 69 LEU GLY ASP ALA LEU ILE ALA GLN ARG LYS ALA VAL GLY SEQRES 6 B 69 GLY ASP HIS GLU SEQRES 1 C 69 MET THR ASN THR ASP LEU LYS PRO LEU LEU ASP ASN LEU SEQRES 2 C 69 ARG ASN ALA THR GLU PHE TRP ASN LEU VAL ALA ALA ALA SEQRES 3 C 69 SER ALA THR ASP GLU SER THR VAL HIS ASN ARG SER TYR SEQRES 4 C 69 ARG ASP ALA LEU ASP TRP LEU GLU SER ALA ALA LEU ALA SEQRES 5 C 69 LEU GLY ASP ALA LEU ILE ALA GLN ARG LYS ALA VAL GLY SEQRES 6 C 69 GLY ASP HIS GLU SEQRES 1 D 69 MET THR ASN THR ASP LEU LYS PRO LEU LEU ASP ASN LEU SEQRES 2 D 69 ARG ASN ALA THR GLU PHE TRP ASN LEU VAL ALA ALA ALA SEQRES 3 D 69 SER ALA THR ASP GLU SER THR VAL HIS ASN ARG SER TYR SEQRES 4 D 69 ARG ASP ALA LEU ASP TRP LEU GLU SER ALA ALA LEU ALA SEQRES 5 D 69 LEU GLY ASP ALA LEU ILE ALA GLN ARG LYS ALA VAL GLY SEQRES 6 D 69 GLY ASP HIS GLU SEQRES 1 E 69 MET THR ASN THR ASP LEU LYS PRO LEU LEU ASP ASN LEU SEQRES 2 E 69 ARG ASN ALA THR GLU PHE TRP ASN LEU VAL ALA ALA ALA SEQRES 3 E 69 SER ALA THR ASP GLU SER THR VAL HIS ASN ARG SER TYR SEQRES 4 E 69 ARG ASP ALA LEU ASP TRP LEU GLU SER ALA ALA LEU ALA SEQRES 5 E 69 LEU GLY ASP ALA LEU ILE ALA GLN ARG LYS ALA VAL GLY SEQRES 6 E 69 GLY ASP HIS GLU SEQRES 1 F 69 MET THR ASN THR ASP LEU LYS PRO LEU LEU ASP ASN LEU SEQRES 2 F 69 ARG ASN ALA THR GLU PHE TRP ASN LEU VAL ALA ALA ALA SEQRES 3 F 69 SER ALA THR ASP GLU SER THR VAL HIS ASN ARG SER TYR SEQRES 4 F 69 ARG ASP ALA LEU ASP TRP LEU GLU SER ALA ALA LEU ALA SEQRES 5 F 69 LEU GLY ASP ALA LEU ILE ALA GLN ARG LYS ALA VAL GLY SEQRES 6 F 69 GLY ASP HIS GLU FORMUL 7 HOH *100(H2 O) HELIX 1 AA1 THR A 2 SER A 27 1 26 HELIX 2 AA2 GLU A 31 LYS A 62 1 32 HELIX 3 AA3 THR B 2 ALA B 28 1 27 HELIX 4 AA4 ASN B 36 ARG B 61 1 26 HELIX 5 AA5 THR C 2 SER C 27 1 26 HELIX 6 AA6 GLU C 31 LYS C 62 1 32 HELIX 7 AA7 ASN D 3 SER D 27 1 25 HELIX 8 AA8 ASN D 36 ARG D 61 1 26 HELIX 9 AA9 THR E 2 SER E 27 1 26 HELIX 10 AB1 GLU E 31 ARG E 61 1 31 HELIX 11 AB2 ASN F 3 SER F 27 1 25 HELIX 12 AB3 ASN F 36 GLN F 60 1 25 CRYST1 114.730 66.120 73.210 90.00 90.03 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008716 0.000000 0.000005 0.00000 SCALE2 0.000000 0.015124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013659 0.00000