data_6V9B # _entry.id 6V9B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6V9B pdb_00006v9b 10.2210/pdb6v9b/pdb WWPDB D_1000246020 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-05-20 2 'Structure model' 1 1 2020-07-22 3 'Structure model' 1 2 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6V9B _pdbx_database_status.recvd_initial_deposition_date 2019-12-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Trachman, R.J.' 1 ? ;Ferre-D'Amare, A.R. ; 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 0969-2126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 28 _citation.language ? _citation.page_first 776 _citation.page_last 785.e3 _citation.title 'Structure-Guided Engineering of the Homodimeric Mango-IV Fluorescence Turn-on Aptamer Yields an RNA FRET Pair.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2020.04.007 _citation.pdbx_database_id_PubMed 32386573 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Trachman 3rd, R.J.' 1 ? primary 'Cojocaru, R.' 2 ? primary 'Wu, D.' 3 ? primary 'Piszczek, G.' 4 ? primary 'Ryckelynck, M.' 5 ? primary 'Unrau, P.J.' 6 ? primary ;Ferre-D'Amare, A.R. ; 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (28-MER)' 9233.559 2 ? ? ? ? 2 non-polymer syn '~{N}-methyl-2-[2-[(~{E})-(1-methylquinolin-4-ylidene)methyl]-1,3-benzothiazol-3-yl]ethanamide' 362.468 3 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 4 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AUCGAGGGAGUGGUGAGGAUGAGGCGAU _entity_poly.pdbx_seq_one_letter_code_can AUCGAGGGAGUGGUGAGGAUGAGGCGAU _entity_poly.pdbx_strand_id B,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '~{N}-methyl-2-[2-[(~{E})-(1-methylquinolin-4-ylidene)methyl]-1,3-benzothiazol-3-yl]ethanamide' QSA 3 'POTASSIUM ION' K # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 U n 1 3 C n 1 4 G n 1 5 A n 1 6 G n 1 7 G n 1 8 G n 1 9 A n 1 10 G n 1 11 U n 1 12 G n 1 13 G n 1 14 U n 1 15 G n 1 16 A n 1 17 G n 1 18 G n 1 19 A n 1 20 U n 1 21 G n 1 22 A n 1 23 G n 1 24 G n 1 25 C n 1 26 G n 1 27 A n 1 28 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 28 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 QSA non-polymer . '~{N}-methyl-2-[2-[(~{E})-(1-methylquinolin-4-ylidene)methyl]-1,3-benzothiazol-3-yl]ethanamide' ? 'C21 H20 N3 O S 1' 362.468 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 1 1 A A B . n A 1 2 U 2 2 2 U U B . n A 1 3 C 3 3 3 C C B . n A 1 4 G 4 4 4 G G B . n A 1 5 A 5 5 5 A A B . n A 1 6 G 6 6 6 G G B . n A 1 7 G 7 7 7 G G B . n A 1 8 G 8 8 8 G G B . n A 1 9 A 9 9 9 A A B . n A 1 10 G 10 10 10 G G B . n A 1 11 U 11 11 11 U U B . n A 1 12 G 12 12 12 G G B . n A 1 13 G 13 13 13 G G B . n A 1 14 U 14 14 14 U U B . n A 1 15 G 15 15 15 G G B . n A 1 16 A 16 16 16 A A B . n A 1 17 G 17 17 17 G G B . n A 1 18 G 18 18 18 G G B . n A 1 19 A 19 19 19 A A B . n A 1 20 U 20 20 20 U U B . n A 1 21 G 21 21 21 G G B . n A 1 22 A 22 22 22 A A B . n A 1 23 G 23 23 23 G G B . n A 1 24 G 24 24 24 G G B . n A 1 25 C 25 25 25 C C B . n A 1 26 G 26 26 26 G G B . n A 1 27 A 27 27 27 A A B . n A 1 28 U 28 28 28 U U B . n B 1 1 A 1 1 1 A A D . n B 1 2 U 2 2 2 U U D . n B 1 3 C 3 3 3 C C D . n B 1 4 G 4 4 4 G G D . n B 1 5 A 5 5 5 A A D . n B 1 6 G 6 6 6 G G D . n B 1 7 G 7 7 7 G G D . n B 1 8 G 8 8 8 G G D . n B 1 9 A 9 9 9 A A D . n B 1 10 G 10 10 10 G G D . n B 1 11 U 11 11 11 U U D . n B 1 12 G 12 12 12 G G D . n B 1 13 G 13 13 13 G G D . n B 1 14 U 14 14 14 U U D . n B 1 15 G 15 15 15 G G D . n B 1 16 A 16 16 16 A A D . n B 1 17 G 17 17 17 G G D . n B 1 18 G 18 18 18 G G D . n B 1 19 A 19 19 19 A A D . n B 1 20 U 20 20 20 U U D . n B 1 21 G 21 21 21 G G D . n B 1 22 A 22 22 22 A A D . n B 1 23 G 23 23 23 G G D . n B 1 24 G 24 24 24 G G D . n B 1 25 C 25 25 25 C C D . n B 1 26 G 26 26 26 G G D . n B 1 27 A 27 27 27 A A D . n B 1 28 U 28 28 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QSA 1 101 101 QSA TO1 B . D 2 QSA 1 102 201 QSA TO1 B . E 3 K 1 103 1 K K B . F 3 K 1 104 2 K K B . G 2 QSA 1 101 101 QSA TO1 D . H 3 K 1 102 3 K K D . I 3 K 1 103 4 K K D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B U 20 ? "O2'" ? A U 20 "O2'" 2 1 Y 1 B U 20 ? N1 ? A U 20 N1 3 1 Y 1 B U 20 ? C2 ? A U 20 C2 4 1 Y 1 B U 20 ? O2 ? A U 20 O2 5 1 Y 1 B U 20 ? N3 ? A U 20 N3 6 1 Y 1 B U 20 ? C4 ? A U 20 C4 7 1 Y 1 B U 20 ? O4 ? A U 20 O4 8 1 Y 1 B U 20 ? C5 ? A U 20 C5 9 1 Y 1 B U 20 ? C6 ? A U 20 C6 10 1 Y 1 D U 20 ? "O4'" ? B U 20 "O4'" 11 1 Y 1 D U 20 ? "C2'" ? B U 20 "C2'" 12 1 Y 1 D U 20 ? "O2'" ? B U 20 "O2'" 13 1 Y 1 D U 20 ? "C1'" ? B U 20 "C1'" 14 1 Y 1 D U 20 ? N1 ? B U 20 N1 15 1 Y 1 D U 20 ? C2 ? B U 20 C2 16 1 Y 1 D U 20 ? O2 ? B U 20 O2 17 1 Y 1 D U 20 ? N3 ? B U 20 N3 18 1 Y 1 D U 20 ? C4 ? B U 20 C4 19 1 Y 1 D U 20 ? O4 ? B U 20 O4 20 1 Y 1 D U 20 ? C5 ? B U 20 C5 21 1 Y 1 D U 20 ? C6 ? B U 20 C6 22 1 Y 1 D A 27 ? "C4'" ? B A 27 "C4'" 23 1 Y 1 D A 27 ? "O4'" ? B A 27 "O4'" 24 1 Y 1 D A 27 ? "C3'" ? B A 27 "C3'" 25 1 Y 1 D A 27 ? "O3'" ? B A 27 "O3'" 26 1 Y 1 D A 27 ? "C2'" ? B A 27 "C2'" 27 1 Y 1 D A 27 ? "O2'" ? B A 27 "O2'" 28 1 Y 1 D A 27 ? "C1'" ? B A 27 "C1'" 29 1 Y 1 D A 27 ? N9 ? B A 27 N9 30 1 Y 1 D A 27 ? C8 ? B A 27 C8 31 1 Y 1 D A 27 ? N7 ? B A 27 N7 32 1 Y 1 D A 27 ? C5 ? B A 27 C5 33 1 Y 1 D A 27 ? C6 ? B A 27 C6 34 1 Y 1 D A 27 ? N6 ? B A 27 N6 35 1 Y 1 D A 27 ? N1 ? B A 27 N1 36 1 Y 1 D A 27 ? C2 ? B A 27 C2 37 1 Y 1 D A 27 ? N3 ? B A 27 N3 38 1 Y 1 D A 27 ? C4 ? B A 27 C4 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6V9B _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.953 _cell.length_a_esd ? _cell.length_b 48.953 _cell.length_b_esd ? _cell.length_c 123.349 _cell.length_c_esd ? _cell.volume 255991.113 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V9B _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ;P 31 2" ; _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6V9B _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Tris-HCl pH 8.5, 0.01 M CoCl2, 1.65-1.75 M NH4SO4, 0.01-0.015 M Phenol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-12-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.495 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.495 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 67.09 _reflns.entry_id 6V9B _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.35 _reflns.d_resolution_low 42.40 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12961 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.97 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.2 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 50.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.97 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.39 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 721 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.42 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 69.55 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6V9B _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.40 _refine.ls_d_res_low 42.39 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12960 _refine.ls_number_reflns_R_free 1300 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.97 _refine.ls_percent_reflns_R_free 10.03 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2082 _refine.ls_R_factor_R_free 0.2437 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2041 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.1240 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4216 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 42.39 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1250 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1246 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0115 ? 1428 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 3.1473 ? 2214 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0724 ? 263 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0088 ? 64 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 21.8313 ? 652 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.40 2.50 . . 154 1320 100.00 . . . 0.3713 . 0.3137 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.50 2.61 . . 140 1277 100.00 . . . 0.3733 . 0.2849 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.61 2.75 . . 146 1290 100.00 . . . 0.3912 . 0.2931 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.75 2.92 . . 140 1296 99.93 . . . 0.3362 . 0.2832 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.92 3.14 . . 148 1290 100.00 . . . 0.2685 . 0.2408 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.15 3.46 . . 146 1289 100.00 . . . 0.2412 . 0.1872 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.46 3.96 . . 134 1293 100.00 . . . 0.2466 . 0.1971 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.96 4.99 . . 154 1305 99.93 . . . 0.2205 . 0.1914 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.99 42.39 . . 138 1300 99.86 . . . 0.1952 . 0.1713 . . . . . . . . . . . # _struct.entry_id 6V9B _struct.title 'Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6V9B _struct_keywords.text 'RNA, aptamer, fluorescence' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 3 ? I N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6V9B _struct_ref.pdbx_db_accession 6V9B _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6V9B B 1 ? 28 ? 6V9B 1 ? 28 ? 1 28 2 1 6V9B D 1 ? 28 ? 6V9B 1 ? 28 ? 1 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1580 ? 1 MORE 6 ? 1 'SSA (A^2)' 9460 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'assay for oligomerization' _pdbx_struct_assembly_auth_evidence.details ;Constant Velocity AUC Size exclusion chromotography ; # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 7 O6 ? ? ? 1_555 F K . K ? ? B G 7 B K 104 1_555 ? ? ? ? ? ? ? 2.612 ? ? metalc2 metalc ? ? A G 8 O6 ? ? ? 1_555 E K . K ? ? B G 8 B K 103 1_555 ? ? ? ? ? ? ? 2.899 ? ? metalc3 metalc ? ? A G 8 O6 ? ? ? 1_555 F K . K ? ? B G 8 B K 104 1_555 ? ? ? ? ? ? ? 3.031 ? ? metalc4 metalc ? ? A G 10 O6 ? ? ? 1_555 E K . K ? ? B G 10 B K 103 1_555 ? ? ? ? ? ? ? 2.880 ? ? metalc5 metalc ? ? A G 12 O6 ? ? ? 1_555 F K . K ? ? B G 12 B K 104 1_555 ? ? ? ? ? ? ? 2.572 ? ? metalc6 metalc ? ? A G 13 O6 ? ? ? 1_555 E K . K ? ? B G 13 B K 103 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc7 metalc ? ? A G 13 O6 ? ? ? 1_555 F K . K ? ? B G 13 B K 104 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc8 metalc ? ? A G 15 O6 ? ? ? 1_555 E K . K ? ? B G 15 B K 103 1_555 ? ? ? ? ? ? ? 2.844 ? ? metalc9 metalc ? ? A G 17 O6 ? ? ? 1_555 F K . K ? ? B G 17 B K 104 1_555 ? ? ? ? ? ? ? 2.904 ? ? metalc10 metalc ? ? A G 18 O6 ? ? ? 1_555 E K . K ? ? B G 18 B K 103 1_555 ? ? ? ? ? ? ? 2.934 ? ? metalc11 metalc ? ? A G 18 O6 ? ? ? 1_555 F K . K ? ? B G 18 B K 104 1_555 ? ? ? ? ? ? ? 3.254 ? ? metalc12 metalc ? ? A G 21 O6 ? ? ? 1_555 E K . K ? ? B G 21 B K 103 1_555 ? ? ? ? ? ? ? 2.624 ? ? metalc13 metalc ? ? A G 23 O6 ? ? ? 1_555 F K . K ? ? B G 23 B K 104 1_555 ? ? ? ? ? ? ? 2.651 ? ? metalc14 metalc ? ? A G 24 O6 ? ? ? 1_555 E K . K ? ? B G 24 B K 103 1_555 ? ? ? ? ? ? ? 2.890 ? ? metalc15 metalc ? ? A G 24 O6 ? ? ? 1_555 F K . K ? ? B G 24 B K 104 1_555 ? ? ? ? ? ? ? 2.884 ? ? metalc16 metalc ? ? A G 26 O6 ? ? ? 1_555 E K . K ? ? B G 26 B K 103 1_555 ? ? ? ? ? ? ? 2.748 ? ? metalc17 metalc ? ? B G 7 O6 ? ? ? 1_555 H K . K ? ? D G 7 D K 102 1_555 ? ? ? ? ? ? ? 2.656 ? ? metalc18 metalc ? ? B G 8 O6 ? ? ? 1_555 H K . K ? ? D G 8 D K 102 1_555 ? ? ? ? ? ? ? 2.924 ? ? metalc19 metalc ? ? B G 8 O6 ? ? ? 1_555 I K . K ? ? D G 8 D K 103 1_555 ? ? ? ? ? ? ? 2.846 ? ? metalc20 metalc ? ? B G 10 O6 ? ? ? 1_555 I K . K ? ? D G 10 D K 103 1_555 ? ? ? ? ? ? ? 2.887 ? ? metalc21 metalc ? ? B G 12 O6 ? ? ? 1_555 H K . K ? ? D G 12 D K 102 1_555 ? ? ? ? ? ? ? 2.649 ? ? metalc22 metalc ? ? B G 13 O6 ? ? ? 1_555 H K . K ? ? D G 13 D K 102 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc23 metalc ? ? B G 13 O6 ? ? ? 1_555 I K . K ? ? D G 13 D K 103 1_555 ? ? ? ? ? ? ? 2.761 ? ? metalc24 metalc ? ? B G 15 O6 ? ? ? 1_555 I K . K ? ? D G 15 D K 103 1_555 ? ? ? ? ? ? ? 2.852 ? ? metalc25 metalc ? ? B G 17 O6 ? ? ? 1_555 H K . K ? ? D G 17 D K 102 1_555 ? ? ? ? ? ? ? 2.743 ? ? metalc26 metalc ? ? B G 18 O6 ? ? ? 1_555 H K . K ? ? D G 18 D K 102 1_555 ? ? ? ? ? ? ? 2.868 ? ? metalc27 metalc ? ? B G 18 O6 ? ? ? 1_555 I K . K ? ? D G 18 D K 103 1_555 ? ? ? ? ? ? ? 2.952 ? ? metalc28 metalc ? ? B G 21 O6 ? ? ? 1_555 I K . K ? ? D G 21 D K 103 1_555 ? ? ? ? ? ? ? 2.726 ? ? metalc29 metalc ? ? B G 23 O6 ? ? ? 1_555 H K . K ? ? D G 23 D K 102 1_555 ? ? ? ? ? ? ? 2.763 ? ? metalc30 metalc ? ? B G 24 O6 ? ? ? 1_555 H K . K ? ? D G 24 D K 102 1_555 ? ? ? ? ? ? ? 2.780 ? ? metalc31 metalc ? ? B G 24 O6 ? ? ? 1_555 I K . K ? ? D G 24 D K 103 1_555 ? ? ? ? ? ? ? 2.860 ? ? metalc32 metalc ? ? B G 26 O6 ? ? ? 1_555 I K . K ? ? D G 26 D K 103 1_555 ? ? ? ? ? ? ? 2.838 ? ? hydrog1 hydrog ? ? A A 1 N1 ? ? ? 1_555 B G 6 N1 ? ? B A 1 D G 6 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog2 hydrog ? ? A A 1 N6 ? ? ? 1_555 B G 6 O6 ? ? B A 1 D G 6 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog3 hydrog ? ? A U 2 N3 ? ? ? 1_555 B A 5 N1 ? ? B U 2 D A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 O4 ? ? ? 1_555 B A 5 N6 ? ? B U 2 D A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 3 N3 ? ? ? 1_555 B G 4 N1 ? ? B C 3 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 N4 ? ? ? 1_555 B G 4 O6 ? ? B C 3 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 O2 ? ? ? 1_555 B G 4 N2 ? ? B C 3 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 3 N3 ? ? B G 4 D C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 3 O2 ? ? B G 4 D C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 3 N4 ? ? B G 4 D C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 5 N1 ? ? ? 1_555 B U 2 N3 ? ? B A 5 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N6 ? ? ? 1_555 B U 2 O4 ? ? B A 5 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 6 N1 ? ? ? 1_555 B A 1 N1 ? ? B G 6 D A 1 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A G 6 O6 ? ? ? 1_555 B A 1 N6 ? ? B G 6 D A 1 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog15 hydrog ? ? A G 7 N1 ? ? ? 1_555 A G 12 O6 ? ? B G 7 B G 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A G 7 N2 ? ? ? 1_555 A G 12 N7 ? ? B G 7 B G 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 7 N7 ? ? ? 1_555 A G 23 N2 ? ? B G 7 B G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 A G 23 N1 ? ? B G 7 B G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A G 8 N1 ? ? ? 1_555 A G 13 O6 ? ? B G 8 B G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A G 8 N2 ? ? ? 1_555 A G 13 N7 ? ? B G 8 B G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A G 8 N7 ? ? ? 1_555 A G 24 N2 ? ? B G 8 B G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A G 24 N1 ? ? B G 8 B G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A G 10 N7 ? ? ? 1_555 A G 15 N2 ? ? B G 10 B G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A G 10 O6 ? ? ? 1_555 A G 15 N1 ? ? B G 10 B G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A G 10 N1 ? ? ? 1_555 A G 26 O6 ? ? B G 10 B G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 26 N7 ? ? B G 10 B G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A G 12 N1 ? ? ? 1_555 A G 17 O6 ? ? B G 12 B G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A G 12 N2 ? ? ? 1_555 A G 17 N7 ? ? B G 12 B G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A G 13 N1 ? ? ? 1_555 A G 18 O6 ? ? B G 13 B G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A G 13 N2 ? ? ? 1_555 A G 18 N7 ? ? B G 13 B G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? A G 15 N7 ? ? ? 1_555 A G 21 N2 ? ? B G 15 B G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? A G 15 O6 ? ? ? 1_555 A G 21 N1 ? ? B G 15 B G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? A G 17 N1 ? ? ? 1_555 A G 23 O6 ? ? B G 17 B G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? A G 17 N2 ? ? ? 1_555 A G 23 N7 ? ? B G 17 B G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? A G 18 N1 ? ? ? 1_555 A G 24 O6 ? ? B G 18 B G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? A G 18 N2 ? ? ? 1_555 A G 24 N7 ? ? B G 18 B G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? A G 21 N7 ? ? ? 1_555 A G 26 N2 ? ? B G 21 B G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? A G 21 O6 ? ? ? 1_555 A G 26 N1 ? ? B G 21 B G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? B G 7 N1 ? ? ? 1_555 B G 12 O6 ? ? D G 7 D G 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? B G 7 N2 ? ? ? 1_555 B G 12 N7 ? ? D G 7 D G 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? B G 7 N7 ? ? ? 1_555 B G 23 N2 ? ? D G 7 D G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? B G 7 O6 ? ? ? 1_555 B G 23 N1 ? ? D G 7 D G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? B G 8 N1 ? ? ? 1_555 B G 13 O6 ? ? D G 8 D G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog44 hydrog ? ? B G 8 N2 ? ? ? 1_555 B G 13 N7 ? ? D G 8 D G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog45 hydrog ? ? B G 8 N7 ? ? ? 1_555 B G 24 N2 ? ? D G 8 D G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog46 hydrog ? ? B G 8 O6 ? ? ? 1_555 B G 24 N1 ? ? D G 8 D G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog47 hydrog ? ? B G 10 N7 ? ? ? 1_555 B G 15 N2 ? ? D G 10 D G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog48 hydrog ? ? B G 10 O6 ? ? ? 1_555 B G 15 N1 ? ? D G 10 D G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog49 hydrog ? ? B G 10 N1 ? ? ? 1_555 B G 26 O6 ? ? D G 10 D G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog50 hydrog ? ? B G 10 N2 ? ? ? 1_555 B G 26 N7 ? ? D G 10 D G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog51 hydrog ? ? B G 12 N1 ? ? ? 1_555 B G 17 O6 ? ? D G 12 D G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog52 hydrog ? ? B G 12 N2 ? ? ? 1_555 B G 17 N7 ? ? D G 12 D G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog53 hydrog ? ? B G 13 N1 ? ? ? 1_555 B G 18 O6 ? ? D G 13 D G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog54 hydrog ? ? B G 13 N2 ? ? ? 1_555 B G 18 N7 ? ? D G 13 D G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog55 hydrog ? ? B G 15 N7 ? ? ? 1_555 B G 21 N2 ? ? D G 15 D G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog56 hydrog ? ? B G 15 O6 ? ? ? 1_555 B G 21 N1 ? ? D G 15 D G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog57 hydrog ? ? B G 17 N1 ? ? ? 1_555 B G 23 O6 ? ? D G 17 D G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog58 hydrog ? ? B G 17 N2 ? ? ? 1_555 B G 23 N7 ? ? D G 17 D G 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog59 hydrog ? ? B G 18 N1 ? ? ? 1_555 B G 24 O6 ? ? D G 18 D G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog60 hydrog ? ? B G 18 N2 ? ? ? 1_555 B G 24 N7 ? ? D G 18 D G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog61 hydrog ? ? B G 21 N7 ? ? ? 1_555 B G 26 N2 ? ? D G 21 D G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog62 hydrog ? ? B G 21 O6 ? ? ? 1_555 B G 26 N1 ? ? D G 21 D G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 7 ? B G 7 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 8 ? B G 8 ? 1_555 66.7 ? 2 O6 ? A G 7 ? B G 7 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 12 ? B G 12 ? 1_555 83.1 ? 3 O6 ? A G 8 ? B G 8 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 12 ? B G 12 ? 1_555 83.8 ? 4 O6 ? A G 7 ? B G 7 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 13 ? B G 13 ? 1_555 127.5 ? 5 O6 ? A G 8 ? B G 8 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 13 ? B G 13 ? 1_555 66.3 ? 6 O6 ? A G 12 ? B G 12 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 13 ? B G 13 ? 1_555 70.0 ? 7 O6 ? A G 7 ? B G 7 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 17 ? B G 17 ? 1_555 133.6 ? 8 O6 ? A G 8 ? B G 8 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 17 ? B G 17 ? 1_555 149.0 ? 9 O6 ? A G 12 ? B G 12 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 17 ? B G 17 ? 1_555 77.5 ? 10 O6 ? A G 13 ? B G 13 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 17 ? B G 17 ? 1_555 84.1 ? 11 O6 ? A G 7 ? B G 7 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 145.4 ? 12 O6 ? A G 8 ? B G 8 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 100.0 ? 13 O6 ? A G 12 ? B G 12 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 128.8 ? 14 O6 ? A G 13 ? B G 13 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 65.5 ? 15 O6 ? A G 17 ? B G 17 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 74.0 ? 16 O6 ? A G 7 ? B G 7 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 23 ? B G 23 ? 1_555 82.5 ? 17 O6 ? A G 8 ? B G 8 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 23 ? B G 23 ? 1_555 132.6 ? 18 O6 ? A G 12 ? B G 12 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 23 ? B G 23 ? 1_555 128.6 ? 19 O6 ? A G 13 ? B G 13 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 23 ? B G 23 ? 1_555 149.0 ? 20 O6 ? A G 17 ? B G 17 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 23 ? B G 23 ? 1_555 77.8 ? 21 O6 ? A G 18 ? B G 18 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 23 ? B G 23 ? 1_555 85.2 ? 22 O6 ? A G 7 ? B G 7 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 81.4 ? 23 O6 ? A G 8 ? B G 8 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 65.7 ? 24 O6 ? A G 12 ? B G 12 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 149.3 ? 25 O6 ? A G 13 ? B G 13 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 99.4 ? 26 O6 ? A G 17 ? B G 17 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 131.3 ? 27 O6 ? A G 18 ? B G 18 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 64.2 ? 28 O6 ? A G 23 ? B G 23 ? 1_555 K ? F K . ? B K 104 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 75.1 ? 29 O6 ? A G 8 ? B G 8 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 10 ? B G 10 ? 1_555 87.7 ? 30 O6 ? A G 8 ? B G 8 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 13 ? B G 13 ? 1_555 68.7 ? 31 O6 ? A G 10 ? B G 10 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 13 ? B G 13 ? 1_555 87.6 ? 32 O6 ? A G 8 ? B G 8 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 15 ? B G 15 ? 1_555 156.0 ? 33 O6 ? A G 10 ? B G 10 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 15 ? B G 15 ? 1_555 75.8 ? 34 O6 ? A G 13 ? B G 13 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 15 ? B G 15 ? 1_555 92.9 ? 35 O6 ? A G 8 ? B G 8 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 111.3 ? 36 O6 ? A G 10 ? B G 10 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 142.0 ? 37 O6 ? A G 13 ? B G 13 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 70.8 ? 38 O6 ? A G 15 ? B G 15 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 18 ? B G 18 ? 1_555 74.6 ? 39 O6 ? A G 8 ? B G 8 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 21 ? B G 21 ? 1_555 135.8 ? 40 O6 ? A G 10 ? B G 10 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 21 ? B G 21 ? 1_555 105.3 ? 41 O6 ? A G 13 ? B G 13 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 21 ? B G 21 ? 1_555 151.3 ? 42 O6 ? A G 15 ? B G 15 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 21 ? B G 21 ? 1_555 66.6 ? 43 O6 ? A G 18 ? B G 18 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 21 ? B G 21 ? 1_555 84.1 ? 44 O6 ? A G 8 ? B G 8 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 67.4 ? 45 O6 ? A G 10 ? B G 10 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 148.3 ? 46 O6 ? A G 13 ? B G 13 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 100.4 ? 47 O6 ? A G 15 ? B G 15 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 133.5 ? 48 O6 ? A G 18 ? B G 18 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 68.4 ? 49 O6 ? A G 21 ? B G 21 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 24 ? B G 24 ? 1_555 82.2 ? 50 O6 ? A G 8 ? B G 8 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 26 ? B G 26 ? 1_555 71.9 ? 51 O6 ? A G 10 ? B G 10 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 26 ? B G 26 ? 1_555 67.0 ? 52 O6 ? A G 13 ? B G 13 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 26 ? B G 26 ? 1_555 133.5 ? 53 O6 ? A G 15 ? B G 15 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 26 ? B G 26 ? 1_555 115.7 ? 54 O6 ? A G 18 ? B G 18 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 26 ? B G 26 ? 1_555 149.1 ? 55 O6 ? A G 21 ? B G 21 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 26 ? B G 26 ? 1_555 75.0 ? 56 O6 ? A G 24 ? B G 24 ? 1_555 K ? E K . ? B K 103 ? 1_555 O6 ? A G 26 ? B G 26 ? 1_555 86.1 ? 57 O6 ? B G 7 ? D G 7 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 8 ? D G 8 ? 1_555 74.3 ? 58 O6 ? B G 7 ? D G 7 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 12 ? D G 12 ? 1_555 79.6 ? 59 O6 ? B G 8 ? D G 8 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 12 ? D G 12 ? 1_555 84.4 ? 60 O6 ? B G 7 ? D G 7 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 13 ? D G 13 ? 1_555 131.8 ? 61 O6 ? B G 8 ? D G 8 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 13 ? D G 13 ? 1_555 65.7 ? 62 O6 ? B G 12 ? D G 12 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 13 ? D G 13 ? 1_555 71.0 ? 63 O6 ? B G 7 ? D G 7 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 17 ? D G 17 ? 1_555 126.8 ? 64 O6 ? B G 8 ? D G 8 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 17 ? D G 17 ? 1_555 148.6 ? 65 O6 ? B G 12 ? D G 12 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 17 ? D G 17 ? 1_555 78.3 ? 66 O6 ? B G 13 ? D G 13 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 17 ? D G 17 ? 1_555 83.9 ? 67 O6 ? B G 7 ? D G 7 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 150.7 ? 68 O6 ? B G 8 ? D G 8 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 105.2 ? 69 O6 ? B G 12 ? D G 12 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 129.7 ? 70 O6 ? B G 13 ? D G 13 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 69.1 ? 71 O6 ? B G 17 ? D G 17 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 68.3 ? 72 O6 ? B G 7 ? D G 7 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 23 ? D G 23 ? 1_555 76.0 ? 73 O6 ? B G 8 ? D G 8 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 23 ? D G 23 ? 1_555 136.0 ? 74 O6 ? B G 12 ? D G 12 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 23 ? D G 23 ? 1_555 121.0 ? 75 O6 ? B G 13 ? D G 13 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 23 ? D G 23 ? 1_555 152.2 ? 76 O6 ? B G 17 ? D G 17 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 23 ? D G 23 ? 1_555 75.3 ? 77 O6 ? B G 18 ? D G 18 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 23 ? D G 23 ? 1_555 86.1 ? 78 O6 ? B G 7 ? D G 7 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 85.5 ? 79 O6 ? B G 8 ? D G 8 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 67.7 ? 80 O6 ? B G 12 ? D G 12 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 151.1 ? 81 O6 ? B G 13 ? D G 13 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 102.4 ? 82 O6 ? B G 17 ? D G 17 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 129.9 ? 83 O6 ? B G 18 ? D G 18 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 68.1 ? 84 O6 ? B G 23 ? D G 23 ? 1_555 K ? H K . ? D K 102 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 78.3 ? 85 O6 ? B G 8 ? D G 8 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 10 ? D G 10 ? 1_555 88.0 ? 86 O6 ? B G 8 ? D G 8 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 13 ? D G 13 ? 1_555 68.0 ? 87 O6 ? B G 10 ? D G 10 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 13 ? D G 13 ? 1_555 85.3 ? 88 O6 ? B G 8 ? D G 8 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 15 ? D G 15 ? 1_555 158.1 ? 89 O6 ? B G 10 ? D G 10 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 15 ? D G 15 ? 1_555 75.4 ? 90 O6 ? B G 13 ? D G 13 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 15 ? D G 15 ? 1_555 96.1 ? 91 O6 ? B G 8 ? D G 8 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 105.1 ? 92 O6 ? B G 10 ? D G 10 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 143.3 ? 93 O6 ? B G 13 ? D G 13 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 69.1 ? 94 O6 ? B G 15 ? D G 15 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 18 ? D G 18 ? 1_555 81.5 ? 95 O6 ? B G 8 ? D G 8 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 21 ? D G 21 ? 1_555 132.6 ? 96 O6 ? B G 10 ? D G 10 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 21 ? D G 21 ? 1_555 107.2 ? 97 O6 ? B G 13 ? D G 13 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 21 ? D G 21 ? 1_555 154.7 ? 98 O6 ? B G 15 ? D G 15 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 21 ? D G 21 ? 1_555 67.2 ? 99 O6 ? B G 18 ? D G 18 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 21 ? D G 21 ? 1_555 89.0 ? 100 O6 ? B G 8 ? D G 8 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 67.7 ? 101 O6 ? B G 10 ? D G 10 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 148.5 ? 102 O6 ? B G 13 ? D G 13 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 102.7 ? 103 O6 ? B G 15 ? D G 15 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 132.6 ? 104 O6 ? B G 18 ? D G 18 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 65.9 ? 105 O6 ? B G 21 ? D G 21 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 24 ? D G 24 ? 1_555 78.3 ? 106 O6 ? B G 8 ? D G 8 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 26 ? D G 26 ? 1_555 75.5 ? 107 O6 ? B G 10 ? D G 10 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 26 ? D G 26 ? 1_555 66.6 ? 108 O6 ? B G 13 ? D G 13 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 26 ? D G 26 ? 1_555 134.4 ? 109 O6 ? B G 15 ? D G 15 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 26 ? D G 26 ? 1_555 109.5 ? 110 O6 ? B G 18 ? D G 18 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 26 ? D G 26 ? 1_555 149.5 ? 111 O6 ? B G 21 ? D G 21 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 26 ? D G 26 ? 1_555 70.7 ? 112 O6 ? B G 24 ? D G 24 ? 1_555 K ? I K . ? D K 103 ? 1_555 O6 ? B G 26 ? D G 26 ? 1_555 87.2 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B QSA 101 ? 3 'binding site for residue QSA B 101' AC2 Software B QSA 102 ? 5 'binding site for residue QSA B 102' AC3 Software B K 103 ? 9 'binding site for residue K B 103' AC4 Software B K 104 ? 9 'binding site for residue K B 104' AC5 Software D QSA 101 ? 6 'binding site for residue QSA D 101' AC6 Software D K 102 ? 9 'binding site for residue K D 102' AC7 Software D K 103 ? 9 'binding site for residue K D 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 A A 9 ? A B 9 . ? 1_555 ? 2 AC1 3 C A 25 ? C B 25 . ? 1_555 ? 3 AC1 3 QSA D . ? QSA B 102 . ? 1_555 ? 4 AC2 5 G A 10 ? G B 10 . ? 1_555 ? 5 AC2 5 A A 19 ? A B 19 . ? 1_555 ? 6 AC2 5 G A 21 ? G B 21 . ? 1_555 ? 7 AC2 5 G A 26 ? G B 26 . ? 1_555 ? 8 AC2 5 QSA C . ? QSA B 101 . ? 1_555 ? 9 AC3 9 G A 8 ? G B 8 . ? 1_555 ? 10 AC3 9 G A 10 ? G B 10 . ? 1_555 ? 11 AC3 9 G A 13 ? G B 13 . ? 1_555 ? 12 AC3 9 G A 15 ? G B 15 . ? 1_555 ? 13 AC3 9 G A 18 ? G B 18 . ? 1_555 ? 14 AC3 9 G A 21 ? G B 21 . ? 1_555 ? 15 AC3 9 G A 24 ? G B 24 . ? 1_555 ? 16 AC3 9 G A 26 ? G B 26 . ? 1_555 ? 17 AC3 9 K F . ? K B 104 . ? 1_555 ? 18 AC4 9 G A 7 ? G B 7 . ? 1_555 ? 19 AC4 9 G A 8 ? G B 8 . ? 1_555 ? 20 AC4 9 G A 12 ? G B 12 . ? 1_555 ? 21 AC4 9 G A 13 ? G B 13 . ? 1_555 ? 22 AC4 9 G A 17 ? G B 17 . ? 1_555 ? 23 AC4 9 G A 18 ? G B 18 . ? 1_555 ? 24 AC4 9 G A 23 ? G B 23 . ? 1_555 ? 25 AC4 9 G A 24 ? G B 24 . ? 1_555 ? 26 AC4 9 K E . ? K B 103 . ? 1_555 ? 27 AC5 6 A B 9 ? A D 9 . ? 1_555 ? 28 AC5 6 G B 10 ? G D 10 . ? 1_555 ? 29 AC5 6 U B 14 ? U D 14 . ? 1_555 ? 30 AC5 6 G B 15 ? G D 15 . ? 1_555 ? 31 AC5 6 G B 21 ? G D 21 . ? 1_555 ? 32 AC5 6 G B 26 ? G D 26 . ? 1_555 ? 33 AC6 9 G B 7 ? G D 7 . ? 1_555 ? 34 AC6 9 G B 8 ? G D 8 . ? 1_555 ? 35 AC6 9 G B 12 ? G D 12 . ? 1_555 ? 36 AC6 9 G B 13 ? G D 13 . ? 1_555 ? 37 AC6 9 G B 17 ? G D 17 . ? 1_555 ? 38 AC6 9 G B 18 ? G D 18 . ? 1_555 ? 39 AC6 9 G B 23 ? G D 23 . ? 1_555 ? 40 AC6 9 G B 24 ? G D 24 . ? 1_555 ? 41 AC6 9 K I . ? K D 103 . ? 1_555 ? 42 AC7 9 G B 8 ? G D 8 . ? 1_555 ? 43 AC7 9 G B 10 ? G D 10 . ? 1_555 ? 44 AC7 9 G B 13 ? G D 13 . ? 1_555 ? 45 AC7 9 G B 15 ? G D 15 . ? 1_555 ? 46 AC7 9 G B 18 ? G D 18 . ? 1_555 ? 47 AC7 9 G B 21 ? G D 21 . ? 1_555 ? 48 AC7 9 G B 24 ? G D 24 . ? 1_555 ? 49 AC7 9 G B 26 ? G D 26 . ? 1_555 ? 50 AC7 9 K H . ? K D 102 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 D _pdbx_validate_rmsd_angle.auth_comp_id_1 A _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 D _pdbx_validate_rmsd_angle.auth_comp_id_2 A _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 D _pdbx_validate_rmsd_angle.auth_comp_id_3 A _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 118.61 _pdbx_validate_rmsd_angle.angle_target_value 108.50 _pdbx_validate_rmsd_angle.angle_deviation 10.11 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+1/3 3 -x+y,-x,z+2/3 4 x-y,-y,-z+2/3 5 -x,-x+y,-z+1/3 6 y,x,-z # _pdbx_entry_details.entry_id 6V9B _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id D _pdbx_unobs_or_zero_occ_residues.auth_comp_id U _pdbx_unobs_or_zero_occ_residues.auth_seq_id 28 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id U _pdbx_unobs_or_zero_occ_residues.label_seq_id 28 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 K K K N N 111 QSA C10 C N N 112 QSA C11 C N N 113 QSA C01 C N N 114 QSA C03 C N N 115 QSA C05 C N N 116 QSA C07 C Y N 117 QSA C08 C N N 118 QSA C09 C N N 119 QSA C13 C N N 120 QSA C14 C Y N 121 QSA C15 C Y N 122 QSA C16 C Y N 123 QSA C17 C Y N 124 QSA C18 C Y N 125 QSA C19 C Y N 126 QSA C21 C Y N 127 QSA C22 C Y N 128 QSA C23 C Y N 129 QSA C24 C Y N 130 QSA C25 C Y N 131 QSA C26 C Y N 132 QSA N02 N N N 133 QSA N06 N Y N 134 QSA N12 N N N 135 QSA O04 O N N 136 QSA S20 S Y N 137 QSA H1 H N N 138 QSA H2 H N N 139 QSA H3 H N N 140 QSA H4 H N N 141 QSA H5 H N N 142 QSA H6 H N N 143 QSA H7 H N N 144 QSA H8 H N N 145 QSA H10 H N N 146 QSA H11 H N N 147 QSA H12 H N N 148 QSA H13 H N N 149 QSA H14 H N N 150 QSA H15 H N N 151 QSA H16 H N N 152 QSA H17 H N N 153 QSA H18 H N N 154 QSA H19 H N N 155 QSA H20 H N N 156 QSA H21 H N N 157 U OP3 O N N 158 U P P N N 159 U OP1 O N N 160 U OP2 O N N 161 U "O5'" O N N 162 U "C5'" C N N 163 U "C4'" C N R 164 U "O4'" O N N 165 U "C3'" C N S 166 U "O3'" O N N 167 U "C2'" C N R 168 U "O2'" O N N 169 U "C1'" C N R 170 U N1 N N N 171 U C2 C N N 172 U O2 O N N 173 U N3 N N N 174 U C4 C N N 175 U O4 O N N 176 U C5 C N N 177 U C6 C N N 178 U HOP3 H N N 179 U HOP2 H N N 180 U "H5'" H N N 181 U "H5''" H N N 182 U "H4'" H N N 183 U "H3'" H N N 184 U "HO3'" H N N 185 U "H2'" H N N 186 U "HO2'" H N N 187 U "H1'" H N N 188 U H3 H N N 189 U H5 H N N 190 U H6 H N N 191 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 QSA C23 C22 doub Y N 116 QSA C23 C24 sing Y N 117 QSA C22 C21 sing Y N 118 QSA C24 C25 doub Y N 119 QSA O04 C03 doub N N 120 QSA C21 C26 doub Y N 121 QSA C21 S20 sing Y N 122 QSA C25 C26 sing Y N 123 QSA C26 N06 sing Y N 124 QSA S20 C07 sing Y N 125 QSA C01 N02 sing N N 126 QSA C03 N02 sing N N 127 QSA C03 C05 sing N N 128 QSA N06 C07 doub Y N 129 QSA N06 C05 sing N N 130 QSA C07 C08 sing N N 131 QSA C10 C11 doub N N 132 QSA C10 C09 sing N N 133 QSA C11 N12 sing N N 134 QSA C08 C09 doub N E 135 QSA C09 C19 sing N N 136 QSA N12 C13 sing N N 137 QSA N12 C14 sing N N 138 QSA C19 C14 doub Y N 139 QSA C19 C18 sing Y N 140 QSA C14 C15 sing Y N 141 QSA C18 C17 doub Y N 142 QSA C15 C16 doub Y N 143 QSA C17 C16 sing Y N 144 QSA C10 H1 sing N N 145 QSA C11 H2 sing N N 146 QSA C01 H3 sing N N 147 QSA C01 H4 sing N N 148 QSA C01 H5 sing N N 149 QSA C05 H6 sing N N 150 QSA C05 H7 sing N N 151 QSA C08 H8 sing N N 152 QSA C13 H10 sing N N 153 QSA C13 H11 sing N N 154 QSA C13 H12 sing N N 155 QSA C15 H13 sing N N 156 QSA C16 H14 sing N N 157 QSA C17 H15 sing N N 158 QSA C18 H16 sing N N 159 QSA C22 H17 sing N N 160 QSA C23 H18 sing N N 161 QSA C24 H19 sing N N 162 QSA C25 H20 sing N N 163 QSA N02 H21 sing N N 164 U OP3 P sing N N 165 U OP3 HOP3 sing N N 166 U P OP1 doub N N 167 U P OP2 sing N N 168 U P "O5'" sing N N 169 U OP2 HOP2 sing N N 170 U "O5'" "C5'" sing N N 171 U "C5'" "C4'" sing N N 172 U "C5'" "H5'" sing N N 173 U "C5'" "H5''" sing N N 174 U "C4'" "O4'" sing N N 175 U "C4'" "C3'" sing N N 176 U "C4'" "H4'" sing N N 177 U "O4'" "C1'" sing N N 178 U "C3'" "O3'" sing N N 179 U "C3'" "C2'" sing N N 180 U "C3'" "H3'" sing N N 181 U "O3'" "HO3'" sing N N 182 U "C2'" "O2'" sing N N 183 U "C2'" "C1'" sing N N 184 U "C2'" "H2'" sing N N 185 U "O2'" "HO2'" sing N N 186 U "C1'" N1 sing N N 187 U "C1'" "H1'" sing N N 188 U N1 C2 sing N N 189 U N1 C6 sing N N 190 U C2 O2 doub N N 191 U C2 N3 sing N N 192 U N3 C4 sing N N 193 U N3 H3 sing N N 194 U C4 O4 doub N N 195 U C4 C5 sing N N 196 U C5 C6 doub N N 197 U C5 H5 sing N N 198 U C6 H6 sing N N 199 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6V9B 'double helix' 6V9B 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 26 1_555 A G 10 1_555 -1.311 -3.593 0.363 -2.229 -10.450 90.975 1 B_G26:G10_B B 26 ? B 10 ? 6 3 1 A G 18 1_555 A G 24 1_555 1.630 3.390 0.398 -6.986 -1.230 -88.850 2 B_G18:G24_B B 18 ? B 24 ? 6 3 1 B G 26 1_555 B G 10 1_555 -1.432 -3.490 0.304 -2.632 -5.090 91.706 3 D_G26:G10_D D 26 ? D 10 ? 6 3 1 B G 21 1_555 B G 15 1_555 1.537 3.162 0.139 3.951 3.863 -92.639 4 D_G21:G15_D D 21 ? D 15 ? 6 3 1 B G 18 1_555 B G 24 1_555 1.483 3.370 0.119 -4.145 -0.467 -89.606 5 D_G18:G24_D D 18 ? D 24 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 26 1_555 A G 10 1_555 A G 18 1_555 A G 24 1_555 -0.466 3.257 2.003 173.886 16.442 27.744 1.544 1.143 0.329 8.412 -88.963 174.817 1 BB_G26G18:G24G10_BB B 26 ? B 10 ? B 18 ? B 24 ? 1 B G 26 1_555 B G 10 1_555 B G 21 1_555 B G 15 1_555 1.762 3.452 0.119 -3.279 -1.696 -178.416 -1.726 0.881 0.121 0.848 -1.640 -178.417 2 DD_G26G21:G15G10_DD D 26 ? D 10 ? D 21 ? D 15 ? 1 B G 21 1_555 B G 15 1_555 B G 18 1_555 B G 24 1_555 3.303 1.280 -2.978 11.877 -175.162 -41.824 -1.691 1.581 -0.080 89.004 6.035 -175.856 3 DD_G21G18:G24G15_DD D 21 ? D 15 ? D 18 ? D 24 ? # _space_group.name_H-M_alt 'P 31 2 1' _space_group.name_Hall ;P 31 2" ; _space_group.IT_number 152 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 6V9B _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.020428 _atom_sites.fract_transf_matrix[1][2] 0.011794 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023588 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008107 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 16.37977 2.54835 ? ? 4.54127 84.28225 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_