HEADER SIGNALING PROTEIN 13-DEC-19 6V9J TITLE EXPANDING THE CHEMICAL LANDSCAPE OF SOS1 ACTIVATORS USING FRAGMENT TITLE 2 BASED METHODS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SON OF SEVENLESS HOMOLOG 1; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: SOS-1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: GTPASE HRAS; COMPND 14 CHAIN: C; COMPND 15 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SOS1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: HRAS, HRAS1; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAS, SOS, INHIBITOR, ONCOPROTEIN, PROTEIN-PROTEIN COMPLEX, MAPK, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.PHAN,S.W.FESIK REVDAT 3 15-NOV-23 6V9J 1 REMARK REVDAT 2 11-OCT-23 6V9J 1 REMARK REVDAT 1 26-AUG-20 6V9J 0 JRNL AUTH D.SARKAR,E.T.OLEJNICZAK,J.PHAN,J.A.COKER,J.SAI,A.ARNOLD, JRNL AUTH 2 Y.BEESETTY,A.G.WATERSON,S.W.FESIK JRNL TITL DISCOVERY OF SULFONAMIDE-DERIVED AGONISTS OF SOS1-MEDIATED JRNL TITL 2 NUCLEOTIDE EXCHANGE ON RAS USING FRAGMENT-BASED METHODS. JRNL REF J.MED.CHEM. V. 63 8325 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32673492 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00511 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 148833 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.350 REMARK 3 FREE R VALUE TEST SET COUNT : 2010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.1126 - 4.2389 1.00 10944 154 0.1415 0.1415 REMARK 3 2 4.2389 - 3.3652 1.00 10624 144 0.1322 0.1300 REMARK 3 3 3.3652 - 2.9400 1.00 10557 146 0.1513 0.1513 REMARK 3 4 2.9400 - 2.6713 1.00 10508 142 0.1613 0.1710 REMARK 3 5 2.6713 - 2.4799 1.00 10478 146 0.1563 0.1840 REMARK 3 6 2.4799 - 2.3337 1.00 10452 146 0.1535 0.1535 REMARK 3 7 2.3337 - 2.2168 1.00 10441 135 0.1560 0.1871 REMARK 3 8 2.2168 - 2.1204 1.00 10446 153 0.1579 0.1848 REMARK 3 9 2.1204 - 2.0387 1.00 10420 138 0.1604 0.1972 REMARK 3 10 2.0387 - 1.9684 1.00 10406 139 0.1661 0.2104 REMARK 3 11 1.9684 - 1.9068 1.00 10421 139 0.1707 0.1986 REMARK 3 12 1.9068 - 1.8523 1.00 10378 142 0.1826 0.2063 REMARK 3 13 1.8523 - 1.8036 1.00 10407 141 0.2023 0.2493 REMARK 3 14 1.8036 - 1.7600 0.99 10341 145 0.2225 0.2533 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3581 50.1581 62.1869 REMARK 3 T TENSOR REMARK 3 T11: 0.1313 T22: 0.1483 REMARK 3 T33: 0.1544 T12: -0.0283 REMARK 3 T13: 0.0093 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.1075 L22: 0.1486 REMARK 3 L33: 0.1799 L12: 0.0850 REMARK 3 L13: 0.0783 L23: 0.1176 REMARK 3 S TENSOR REMARK 3 S11: 0.0316 S12: 0.0122 S13: 0.0186 REMARK 3 S21: -0.0202 S22: 0.0097 S23: 0.0975 REMARK 3 S31: 0.0668 S32: -0.0586 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9089 45.3289 56.2307 REMARK 3 T TENSOR REMARK 3 T11: 0.1612 T22: 0.2044 REMARK 3 T33: 0.1523 T12: -0.0550 REMARK 3 T13: 0.0186 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 0.0694 L22: 0.0427 REMARK 3 L33: 0.1058 L12: 0.0015 REMARK 3 L13: 0.1180 L23: 0.0031 REMARK 3 S TENSOR REMARK 3 S11: 0.0484 S12: -0.2372 S13: 0.0074 REMARK 3 S21: 0.1150 S22: 0.0180 S23: -0.0650 REMARK 3 S31: -0.1112 S32: 0.1566 S33: 0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7711 47.1974 72.4634 REMARK 3 T TENSOR REMARK 3 T11: 0.1946 T22: 0.2134 REMARK 3 T33: 0.1608 T12: -0.0481 REMARK 3 T13: 0.0330 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.0585 L22: 0.0125 REMARK 3 L33: 0.0444 L12: -0.0175 REMARK 3 L13: 0.0607 L23: -0.0092 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: -0.1273 S13: -0.1556 REMARK 3 S21: 0.1091 S22: -0.0417 S23: 0.0971 REMARK 3 S31: 0.0697 S32: 0.0217 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2658 52.1312 71.7064 REMARK 3 T TENSOR REMARK 3 T11: 0.2058 T22: 0.1627 REMARK 3 T33: 0.1689 T12: -0.0329 REMARK 3 T13: 0.0177 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.0658 L22: 0.0580 REMARK 3 L33: 0.1525 L12: 0.0492 REMARK 3 L13: 0.0362 L23: 0.0604 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.2005 S13: -0.0417 REMARK 3 S21: 0.2688 S22: 0.0076 S23: 0.1718 REMARK 3 S31: 0.0953 S32: 0.0009 S33: 0.0008 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2947 56.5716 78.5227 REMARK 3 T TENSOR REMARK 3 T11: 0.2350 T22: 0.2719 REMARK 3 T33: 0.1729 T12: -0.0528 REMARK 3 T13: 0.0264 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 0.0358 L22: 0.0491 REMARK 3 L33: 0.0199 L12: 0.0119 REMARK 3 L13: 0.0439 L23: 0.0211 REMARK 3 S TENSOR REMARK 3 S11: 0.0392 S12: -0.4093 S13: 0.1830 REMARK 3 S21: 0.3254 S22: -0.0013 S23: -0.0421 REMARK 3 S31: -0.0841 S32: 0.0161 S33: 0.0007 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7590 55.7272 71.1868 REMARK 3 T TENSOR REMARK 3 T11: 0.1562 T22: 0.1953 REMARK 3 T33: 0.1225 T12: -0.0461 REMARK 3 T13: -0.0073 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: 0.0601 L22: 0.0962 REMARK 3 L33: 0.0354 L12: 0.0718 REMARK 3 L13: -0.0396 L23: 0.0113 REMARK 3 S TENSOR REMARK 3 S11: 0.1225 S12: -0.2575 S13: 0.1114 REMARK 3 S21: 0.2002 S22: -0.0240 S23: 0.0950 REMARK 3 S31: -0.0506 S32: 0.0717 S33: 0.0068 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3830 66.0011 65.5997 REMARK 3 T TENSOR REMARK 3 T11: 0.1773 T22: 0.1339 REMARK 3 T33: 0.2017 T12: -0.0272 REMARK 3 T13: 0.0288 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.1340 L22: 0.1518 REMARK 3 L33: 0.0990 L12: 0.2113 REMARK 3 L13: -0.1122 L23: -0.1349 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: 0.0207 S13: 0.1562 REMARK 3 S21: -0.0321 S22: 0.0059 S23: 0.0805 REMARK 3 S31: -0.1673 S32: 0.1078 S33: -0.0003 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2428 54.1349 60.5461 REMARK 3 T TENSOR REMARK 3 T11: 0.1632 T22: 0.1869 REMARK 3 T33: 0.1588 T12: -0.0549 REMARK 3 T13: 0.0110 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.0408 L22: 0.0240 REMARK 3 L33: 0.0454 L12: -0.0360 REMARK 3 L13: -0.0488 L23: 0.0060 REMARK 3 S TENSOR REMARK 3 S11: 0.0447 S12: 0.1297 S13: 0.1102 REMARK 3 S21: 0.0617 S22: -0.1076 S23: -0.1210 REMARK 3 S31: -0.1195 S32: 0.1503 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 565 THROUGH 699 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4160 30.5617 79.7551 REMARK 3 T TENSOR REMARK 3 T11: 0.1411 T22: 0.1434 REMARK 3 T33: 0.1139 T12: -0.0190 REMARK 3 T13: 0.0005 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.1451 L22: 0.2149 REMARK 3 L33: 0.4290 L12: -0.1902 REMARK 3 L13: -0.2655 L23: 0.1656 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: -0.0288 S13: 0.0328 REMARK 3 S21: 0.0294 S22: 0.0359 S23: 0.0009 REMARK 3 S31: 0.0135 S32: 0.0977 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 700 THROUGH 818 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2901 40.1333 48.9221 REMARK 3 T TENSOR REMARK 3 T11: 0.0937 T22: 0.1159 REMARK 3 T33: 0.1245 T12: -0.0093 REMARK 3 T13: 0.0024 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.1688 L22: 0.0028 REMARK 3 L33: 0.6291 L12: 0.1193 REMARK 3 L13: -0.1432 L23: -0.1028 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: -0.0041 S13: 0.0230 REMARK 3 S21: -0.0179 S22: 0.0114 S23: 0.0424 REMARK 3 S31: -0.0528 S32: -0.0593 S33: 0.0008 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 819 THROUGH 1046 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9934 33.0923 32.0125 REMARK 3 T TENSOR REMARK 3 T11: 0.0783 T22: 0.0867 REMARK 3 T33: 0.0863 T12: -0.0231 REMARK 3 T13: 0.0113 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.1784 L22: 0.2392 REMARK 3 L33: 0.8001 L12: 0.0509 REMARK 3 L13: -0.1649 L23: -0.1529 REMARK 3 S TENSOR REMARK 3 S11: -0.0361 S12: 0.0306 S13: 0.0000 REMARK 3 S21: -0.0292 S22: 0.0192 S23: -0.0316 REMARK 3 S31: 0.0247 S32: 0.0484 S33: -0.0330 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 0 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4822 12.1459 41.6430 REMARK 3 T TENSOR REMARK 3 T11: 0.1313 T22: 0.1286 REMARK 3 T33: 0.2223 T12: 0.0221 REMARK 3 T13: -0.0019 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.0055 L22: 0.1064 REMARK 3 L33: 0.1055 L12: -0.0319 REMARK 3 L13: 0.0202 L23: -0.0719 REMARK 3 S TENSOR REMARK 3 S11: -0.0966 S12: 0.0179 S13: 0.1858 REMARK 3 S21: 0.1000 S22: 0.0459 S23: -0.1709 REMARK 3 S31: 0.0226 S32: -0.0071 S33: -0.0005 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0627 12.6498 55.7311 REMARK 3 T TENSOR REMARK 3 T11: 0.3960 T22: 0.1825 REMARK 3 T33: 0.5300 T12: 0.0199 REMARK 3 T13: -0.1688 T23: 0.0751 REMARK 3 L TENSOR REMARK 3 L11: -0.0029 L22: 0.0048 REMARK 3 L33: 0.0131 L12: -0.0092 REMARK 3 L13: -0.0042 L23: -0.0215 REMARK 3 S TENSOR REMARK 3 S11: 0.1354 S12: 0.0739 S13: -0.3016 REMARK 3 S21: 0.1921 S22: 0.1802 S23: 0.0318 REMARK 3 S31: 0.4154 S32: 0.0395 S33: 0.0013 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9744 14.1863 45.8727 REMARK 3 T TENSOR REMARK 3 T11: 0.2753 T22: 0.2902 REMARK 3 T33: 0.4575 T12: 0.0584 REMARK 3 T13: -0.1015 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: -0.0041 L22: 0.0777 REMARK 3 L33: 0.1364 L12: 0.0284 REMARK 3 L13: -0.0568 L23: -0.1083 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: -0.0636 S13: 0.0364 REMARK 3 S21: 0.0172 S22: -0.1682 S23: -0.1661 REMARK 3 S31: -0.1770 S32: 0.1857 S33: 0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3889 18.9994 36.1212 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: 0.0954 REMARK 3 T33: 0.1897 T12: 0.0002 REMARK 3 T13: 0.0174 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 0.0908 L22: 0.2302 REMARK 3 L33: 0.3229 L12: 0.0451 REMARK 3 L13: 0.0583 L23: 0.2014 REMARK 3 S TENSOR REMARK 3 S11: -0.0527 S12: -0.0178 S13: -0.0494 REMARK 3 S21: -0.0376 S22: -0.0460 S23: -0.2139 REMARK 3 S31: -0.0124 S32: 0.0066 S33: -0.0512 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2692 8.7372 31.6200 REMARK 3 T TENSOR REMARK 3 T11: 0.1438 T22: 0.1197 REMARK 3 T33: 0.1410 T12: 0.0268 REMARK 3 T13: 0.0166 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.0357 L22: 0.3946 REMARK 3 L33: 0.1178 L12: -0.0068 REMARK 3 L13: -0.0812 L23: 0.0116 REMARK 3 S TENSOR REMARK 3 S11: 0.0902 S12: 0.0617 S13: -0.0308 REMARK 3 S21: -0.1603 S22: -0.0517 S23: 0.0376 REMARK 3 S31: 0.0270 S32: 0.0240 S33: 0.0002 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7954 0.5675 44.4543 REMARK 3 T TENSOR REMARK 3 T11: 0.1535 T22: 0.1790 REMARK 3 T33: 0.3081 T12: -0.0095 REMARK 3 T13: 0.0289 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 0.0102 L22: 0.0104 REMARK 3 L33: 0.0087 L12: -0.0044 REMARK 3 L13: 0.0044 L23: -0.0091 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: -0.2290 S13: -0.0307 REMARK 3 S21: 0.0773 S22: 0.0302 S23: 0.0004 REMARK 3 S31: 0.0387 S32: -0.1542 S33: 0.0001 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 127 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9134 -0.9211 37.2003 REMARK 3 T TENSOR REMARK 3 T11: 0.1656 T22: 0.1293 REMARK 3 T33: 0.1551 T12: 0.0318 REMARK 3 T13: -0.0033 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 0.0650 L22: 0.1608 REMARK 3 L33: 0.0394 L12: -0.1154 REMARK 3 L13: 0.0380 L23: -0.0442 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: -0.0568 S13: -0.0509 REMARK 3 S21: -0.0374 S22: -0.0641 S23: 0.0359 REMARK 3 S31: 0.0389 S32: -0.0028 S33: 0.0000 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 152 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9168 3.4228 36.9149 REMARK 3 T TENSOR REMARK 3 T11: 0.1370 T22: 0.1287 REMARK 3 T33: 0.2484 T12: 0.0519 REMARK 3 T13: 0.0489 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.1575 L22: 0.1589 REMARK 3 L33: 0.5350 L12: 0.1043 REMARK 3 L13: 0.1834 L23: 0.2243 REMARK 3 S TENSOR REMARK 3 S11: 0.0485 S12: 0.0058 S13: 0.0867 REMARK 3 S21: -0.1406 S22: -0.1143 S23: -0.3836 REMARK 3 S31: 0.2713 S32: -0.0479 S33: 0.0202 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V9J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1000246038. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 148849 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.80 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.40 REMARK 200 R MERGE FOR SHELL (I) : 0.84400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NYI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 2.0 M SODIUM REMARK 280 FORMATE, PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 91.71500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 89.22450 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 91.71500 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 89.22450 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 91.71500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 89.22450 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 91.71500 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 89.22450 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 91.71500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 89.22450 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 91.71500 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 89.22450 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 91.71500 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 89.22450 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 91.71500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 91.71500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.22450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2806 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASN B 591 REMARK 465 MET B 592 REMARK 465 GLN B 593 REMARK 465 PRO B 594 REMARK 465 LYS B 595 REMARK 465 ALA B 596 REMARK 465 ARG B 744 REMARK 465 ASP B 745 REMARK 465 ASN B 746 REMARK 465 GLY B 747 REMARK 465 PRO B 748 REMARK 465 GLY B 749 REMARK 465 HIS B 750 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2261 O HOH B 2281 1.80 REMARK 500 O HOH B 2477 O HOH B 2665 1.81 REMARK 500 O HOH B 2681 O HOH B 2689 1.83 REMARK 500 O HOH B 2522 O HOH B 2624 1.88 REMARK 500 NH1 ARG C 68 O HOH C 301 1.93 REMARK 500 O2 FMT C 201 O HOH C 302 1.94 REMARK 500 O HOH C 424 O HOH C 453 1.94 REMARK 500 O HOH C 479 O HOH C 505 1.95 REMARK 500 O HOH B 2171 O HOH B 2563 1.95 REMARK 500 O HOH B 2748 O HOH B 2805 1.96 REMARK 500 O HOH B 2628 O HOH B 2711 1.97 REMARK 500 O HOH C 391 O HOH C 470 1.99 REMARK 500 O HOH B 2103 O HOH B 2205 1.99 REMARK 500 O HOH C 327 O HOH C 431 1.99 REMARK 500 O HOH B 2146 O HOH B 2509 1.99 REMARK 500 O HOH C 474 O HOH C 481 2.00 REMARK 500 O HOH A 416 O HOH A 444 2.01 REMARK 500 NH2 ARG B 982 O HOH B 2101 2.03 REMARK 500 O HOH B 2289 O HOH B 2596 2.03 REMARK 500 O HOH C 308 O HOH C 476 2.05 REMARK 500 O HOH C 303 O HOH C 437 2.05 REMARK 500 NH2 ARG C 68 O HOH C 303 2.08 REMARK 500 O HOH A 302 O HOH A 342 2.08 REMARK 500 O2 GOL B 2008 O HOH B 2102 2.09 REMARK 500 O HOH A 302 O HOH A 346 2.09 REMARK 500 O HOH B 2250 O HOH B 2471 2.09 REMARK 500 O HOH B 2114 O HOH B 2622 2.10 REMARK 500 O HOH B 2684 O HOH B 2771 2.10 REMARK 500 O HOH B 2760 O HOH B 2773 2.10 REMARK 500 O HOH B 2171 O HOH C 390 2.10 REMARK 500 O HOH C 312 O HOH C 330 2.11 REMARK 500 OE1 GLU C 49 O HOH C 304 2.11 REMARK 500 O HOH A 401 O HOH B 2620 2.11 REMARK 500 O HOH B 2437 O HOH B 2794 2.11 REMARK 500 O HOH B 2747 O HOH B 2763 2.12 REMARK 500 O HOH B 2134 O HOH B 2723 2.12 REMARK 500 O HOH A 449 O HOH A 454 2.13 REMARK 500 O HOH A 364 O HOH A 463 2.13 REMARK 500 O HOH A 354 O HOH A 461 2.13 REMARK 500 OE1 GLN A 129 O HOH A 301 2.13 REMARK 500 O HOH B 2117 O HOH B 2605 2.13 REMARK 500 O HOH A 450 O HOH A 453 2.13 REMARK 500 O HOH B 2139 O HOH B 2345 2.13 REMARK 500 OD CSO A 51 O HOH A 302 2.14 REMARK 500 NE2 GLN B 755 O HOH B 2103 2.16 REMARK 500 N GLN B 755 O HOH B 2104 2.16 REMARK 500 O HOH B 2177 O HOH B 2752 2.17 REMARK 500 O HOH B 2489 O HOH B 2736 2.17 REMARK 500 O HOH B 2453 O HOH B 2676 2.17 REMARK 500 O HOH B 2230 O HOH B 2648 2.18 REMARK 500 REMARK 500 THIS ENTRY HAS 53 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2166 O HOH C 430 3555 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -64.10 -99.19 REMARK 500 ARG A 149 -4.26 80.30 REMARK 500 HIS B 764 -118.61 -125.63 REMARK 500 HIS B 770 61.62 -102.11 REMARK 500 ASN C 26 99.95 -44.23 REMARK 500 GLU C 37 117.32 -30.58 REMARK 500 TYR C 40 18.04 -142.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN C 25 ASN C 26 143.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 83.4 REMARK 620 3 GNP A 201 O2G 173.4 90.2 REMARK 620 4 GNP A 201 O2B 92.2 174.2 94.2 REMARK 620 5 HOH A 321 O 85.8 92.2 93.0 91.4 REMARK 620 6 HOH A 358 O 88.7 88.1 92.6 87.9 174.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 87 OG1 REMARK 620 2 THR C 124 OG1 95.7 REMARK 620 3 HOH C 463 O 66.7 94.3 REMARK 620 4 HOH C 469 O 117.3 137.7 122.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QTM B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 202 DBREF 6V9J A 1 166 UNP P01112 RASH_HUMAN 1 166 DBREF 6V9J B 566 1046 UNP Q07889 SOS1_HUMAN 566 1046 DBREF 6V9J C 1 166 UNP P01112 RASH_HUMAN 1 166 SEQADV 6V9J GLY A 0 UNP P01112 EXPRESSION TAG SEQADV 6V9J ALA A 64 UNP P01112 TYR 64 CONFLICT SEQADV 6V9J GLY B 565 UNP Q07889 EXPRESSION TAG SEQADV 6V9J GLY C 0 UNP P01112 EXPRESSION TAG SEQRES 1 A 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 A 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CSO SEQRES 5 A 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU ALA SEQRES 6 A 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 A 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 A 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 A 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS SEQRES 1 B 482 GLY GLN MET ARG LEU PRO SER ALA ASP VAL TYR ARG PHE SEQRES 2 B 482 ALA GLU PRO ASP SER GLU GLU ASN ILE ILE PHE GLU GLU SEQRES 3 B 482 ASN MET GLN PRO LYS ALA GLY ILE PRO ILE ILE LYS ALA SEQRES 4 B 482 GLY THR VAL ILE LYS LEU ILE GLU ARG LEU THR TYR HIS SEQRES 5 B 482 MET TYR ALA ASP PRO ASN PHE VAL ARG THR PHE LEU THR SEQRES 6 B 482 THR TYR ARG SER PHE CYS LYS PRO GLN GLU LEU LEU SER SEQRES 7 B 482 LEU ILE ILE GLU ARG PHE GLU ILE PRO GLU PRO GLU PRO SEQRES 8 B 482 THR GLU ALA ASP ARG ILE ALA ILE GLU ASN GLY ASP GLN SEQRES 9 B 482 PRO LEU SER ALA GLU LEU LYS ARG PHE ARG LYS GLU TYR SEQRES 10 B 482 ILE GLN PRO VAL GLN LEU ARG VAL LEU ASN VAL CYS ARG SEQRES 11 B 482 HIS TRP VAL GLU HIS HIS PHE TYR ASP PHE GLU ARG ASP SEQRES 12 B 482 ALA TYR LEU LEU GLN ARG MET GLU GLU PHE ILE GLY THR SEQRES 13 B 482 VAL ARG GLY LYS ALA MET LYS LYS TRP VAL GLU SER ILE SEQRES 14 B 482 THR LYS ILE ILE GLN ARG LYS LYS ILE ALA ARG ASP ASN SEQRES 15 B 482 GLY PRO GLY HIS ASN ILE THR PHE GLN SER SER PRO PRO SEQRES 16 B 482 THR VAL GLU TRP HIS ILE SER ARG PRO GLY HIS ILE GLU SEQRES 17 B 482 THR PHE ASP LEU LEU THR LEU HIS PRO ILE GLU ILE ALA SEQRES 18 B 482 ARG GLN LEU THR LEU LEU GLU SER ASP LEU TYR ARG ALA SEQRES 19 B 482 VAL GLN PRO SER GLU LEU VAL GLY SER VAL TRP THR LYS SEQRES 20 B 482 GLU ASP LYS GLU ILE ASN SER PRO ASN LEU LEU LYS MET SEQRES 21 B 482 ILE ARG HIS THR THR ASN LEU THR LEU TRP PHE GLU LYS SEQRES 22 B 482 CYS ILE VAL GLU THR GLU ASN LEU GLU GLU ARG VAL ALA SEQRES 23 B 482 VAL VAL SER ARG ILE ILE GLU ILE LEU GLN VAL PHE GLN SEQRES 24 B 482 GLU LEU ASN ASN PHE ASN GLY VAL LEU GLU VAL VAL SER SEQRES 25 B 482 ALA MET ASN SER SER PRO VAL TYR ARG LEU ASP HIS THR SEQRES 26 B 482 PHE GLU GLN ILE PRO SER ARG GLN LYS LYS ILE LEU GLU SEQRES 27 B 482 GLU ALA HIS GLU LEU SER GLU ASP HIS TYR LYS LYS TYR SEQRES 28 B 482 LEU ALA LYS LEU ARG SER ILE ASN PRO PRO CYS VAL PRO SEQRES 29 B 482 PHE PHE GLY ILE TYR LEU THR ASN ILE LEU LYS THR GLU SEQRES 30 B 482 GLU GLY ASN PRO GLU VAL LEU LYS ARG HIS GLY LYS GLU SEQRES 31 B 482 LEU ILE ASN PHE SER LYS ARG ARG LYS VAL ALA GLU ILE SEQRES 32 B 482 THR GLY GLU ILE GLN GLN TYR GLN ASN GLN PRO TYR CYS SEQRES 33 B 482 LEU ARG VAL GLU SER ASP ILE LYS ARG PHE PHE GLU ASN SEQRES 34 B 482 LEU ASN PRO MET GLY ASN SER MET GLU LYS GLU PHE THR SEQRES 35 B 482 ASP TYR LEU PHE ASN LYS SER LEU GLU ILE GLU PRO ARG SEQRES 36 B 482 ASN PRO LYS PRO LEU PRO ARG PHE PRO LYS LYS TYR SER SEQRES 37 B 482 TYR PRO LEU LYS SER PRO GLY VAL ARG PRO SER ASN PRO SEQRES 38 B 482 ARG SEQRES 1 C 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 C 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 C 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 C 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 C 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 C 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 C 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 C 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 C 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 C 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 C 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 C 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 C 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS MODRES 6V9J CSO A 51 CYS MODIFIED RESIDUE HET CSO A 51 7 HET GNP A 201 32 HET MG A 202 1 HET QTM B2001 22 HET FMT B2002 3 HET FMT B2003 3 HET FMT B2004 3 HET FMT B2005 3 HET FMT B2006 3 HET GOL B2007 6 HET GOL B2008 6 HET FMT C 201 3 HET NA C 202 1 HETNAM CSO S-HYDROXYCYSTEINE HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM QTM 3-(2-AMINOETHYL)-4-(3-CHLORO-4-FLUOROPHENOXY)BENZENE-1- HETNAM 2 QTM SULFONAMIDE HETNAM FMT FORMIC ACID HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO C3 H7 N O3 S FORMUL 4 GNP C10 H17 N6 O13 P3 FORMUL 5 MG MG 2+ FORMUL 6 QTM C14 H14 CL F N2 O3 S FORMUL 7 FMT 6(C H2 O2) FORMUL 12 GOL 2(C3 H8 O3) FORMUL 15 NA NA 1+ FORMUL 16 HOH *1094(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLN A 61 MET A 67 5 7 HELIX 3 AA3 ARG A 68 GLY A 75 1 8 HELIX 4 AA4 ASN A 86 ASP A 92 1 7 HELIX 5 AA5 ASP A 92 ASP A 105 1 14 HELIX 6 AA6 GLU A 126 GLY A 138 1 13 HELIX 7 AA7 GLY A 151 GLN A 165 1 15 HELIX 8 AA8 TYR B 575 GLU B 579 5 5 HELIX 9 AA9 THR B 605 THR B 614 1 10 HELIX 10 AB1 ASP B 620 TYR B 631 1 12 HELIX 11 AB2 ARG B 632 PHE B 634 5 3 HELIX 12 AB3 LYS B 636 GLU B 649 1 14 HELIX 13 AB4 THR B 656 ASN B 665 1 10 HELIX 14 AB5 SER B 671 TYR B 681 1 11 HELIX 15 AB6 TYR B 681 HIS B 700 1 20 HELIX 16 AB7 PHE B 701 ASP B 707 1 7 HELIX 17 AB8 ASP B 707 THR B 720 1 14 HELIX 18 AB9 GLY B 723 ALA B 725 5 3 HELIX 19 AC1 MET B 726 ALA B 743 1 18 HELIX 20 AC2 HIS B 770 PHE B 774 5 5 HELIX 21 AC3 HIS B 780 ALA B 798 1 19 HELIX 22 AC4 GLN B 800 LYS B 811 5 12 HELIX 23 AC5 ASP B 813 SER B 818 1 6 HELIX 24 AC6 SER B 818 GLU B 841 1 24 HELIX 25 AC7 ASN B 844 LEU B 865 1 22 HELIX 26 AC8 ASN B 867 ASN B 879 1 13 HELIX 27 AC9 SER B 880 ARG B 885 1 6 HELIX 28 AD1 LEU B 886 ILE B 893 1 8 HELIX 29 AD2 PRO B 894 LEU B 907 1 14 HELIX 30 AD3 SER B 908 ARG B 920 1 13 HELIX 31 AD4 PHE B 930 GLY B 943 1 14 HELIX 32 AD5 PHE B 958 GLN B 975 1 18 HELIX 33 AD6 GLU B 984 ASN B 993 1 10 HELIX 34 AD7 MET B 1001 GLU B 1017 1 17 HELIX 35 AD8 SER C 17 GLN C 25 1 9 HELIX 36 AD9 TYR C 64 ALA C 66 5 3 HELIX 37 AE1 MET C 67 THR C 74 1 8 HELIX 38 AE2 ASN C 86 ASP C 92 1 7 HELIX 39 AE3 ASP C 92 ASP C 105 1 14 HELIX 40 AE4 GLU C 126 GLY C 138 1 13 HELIX 41 AE5 GLY C 151 GLN C 165 1 15 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O LEU A 53 N LYS A 42 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 4 ILE B 586 PHE B 588 0 SHEET 2 AA2 4 ILE B 601 GLY B 604 -1 O ALA B 603 N ILE B 587 SHEET 3 AA2 4 LYS B 953 ASN B 957 -1 O ILE B 956 N GLY B 604 SHEET 4 AA2 4 VAL B 947 ARG B 950 -1 N LEU B 948 O LEU B 955 SHEET 1 AA3 6 ARG C 41 ILE C 46 0 SHEET 2 AA3 6 GLU C 49 ASP C 57 -1 O LEU C 53 N LYS C 42 SHEET 3 AA3 6 THR C 2 GLY C 10 1 N LEU C 6 O ASP C 54 SHEET 4 AA3 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 AA3 6 MET C 111 LYS C 117 1 O ASN C 116 N PHE C 82 SHEET 6 AA3 6 TYR C 141 SER C 145 1 O THR C 144 N LYS C 117 LINK C THR A 50 N CSO A 51 1555 1555 1.32 LINK C CSO A 51 N LEU A 52 1555 1555 1.32 LINK OG SER A 17 MG MG A 202 1555 1555 2.09 LINK OG1 THR A 35 MG MG A 202 1555 1555 2.06 LINK O2G GNP A 201 MG MG A 202 1555 1555 2.05 LINK O2B GNP A 201 MG MG A 202 1555 1555 2.07 LINK MG MG A 202 O HOH A 321 1555 1555 2.08 LINK MG MG A 202 O HOH A 358 1555 1555 2.12 LINK OG1BTHR C 87 NA NA C 202 1555 1555 3.20 LINK OG1 THR C 124 NA NA C 202 1555 1555 3.15 LINK NA NA C 202 O HOH C 463 1555 1555 2.72 LINK NA NA C 202 O HOH C 469 1555 1555 2.25 CISPEP 1 PRO B 924 PRO B 925 0 10.22 CISPEP 2 ASN B 1020 PRO B 1021 0 7.08 SITE 1 AC1 31 GLY A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 31 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 31 VAL A 29 ASP A 30 GLU A 31 TYR A 32 SITE 4 AC1 31 PRO A 34 THR A 35 GLY A 60 GLN A 61 SITE 5 AC1 31 ASN A 116 LYS A 117 ASP A 119 LEU A 120 SITE 6 AC1 31 SER A 145 ALA A 146 LYS A 147 MG A 202 SITE 7 AC1 31 HOH A 321 HOH A 358 HOH A 368 HOH A 371 SITE 8 AC1 31 HOH A 373 HOH A 410 HOH A 424 SITE 1 AC2 5 SER A 17 THR A 35 GNP A 201 HOH A 321 SITE 2 AC2 5 HOH A 358 SITE 1 AC3 15 VAL B 852 MET B 878 ASN B 879 VAL B 883 SITE 2 AC3 15 TYR B 884 LEU B 886 THR B 889 PHE B 890 SITE 3 AC3 15 ILE B 893 GLU B 902 HIS B 905 HOH B2176 SITE 4 AC3 15 HOH B2327 HOH B2372 HOH B2517 SITE 1 AC4 6 GLN B 566 MET B 567 HIS B 616 MET B 617 SITE 2 AC4 6 HOH B2169 HOH B2240 SITE 1 AC5 3 ARG A 128 ARG B 767 PRO B 768 SITE 1 AC6 7 GLU A 37 MET A 67 GLN A 70 ALA B 619 SITE 2 AC6 7 ARG B 688 HOH B2145 HOH B2148 SITE 1 AC7 6 GLU B 611 TYR B 615 HIS B 616 ARG B 647 SITE 2 AC7 6 TYR B 681 HOH B2268 SITE 1 AC8 1 TYR B1031 SITE 1 AC9 5 SER B 793 ASP B 794 PRO B 978 TYR B 979 SITE 2 AC9 5 HOH B2262 SITE 1 AD1 5 ARG B 786 GLU B 864 VAL B1040 HOH B2102 SITE 2 AD1 5 HOH B2237 SITE 1 AD2 5 LEU B 938 LYS C 16 SER C 17 GLU C 62 SITE 2 AD2 5 HOH C 302 SITE 1 AD3 6 ASN C 85 ASN C 86 THR C 87 THR C 124 SITE 2 AD3 6 HOH C 463 HOH C 469 CRYST1 183.430 183.430 178.449 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005452 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005452 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005604 0.00000