HEADER RNA BINDING PROTEIN 16-DEC-19 6V9U TITLE CRYSTAL STRUCTURE OF HUMAN TLR8 ECTODOMAIN BOUND TO SMALL MOLECULE TITLE 2 ANTAGONIST 14C COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 8; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TLR8, UNQ249/PRO286; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227 KEYWDS TOLL-LIKE RECEPTOR, PATTERN RECOGNITION RECEPTOR, PATHOGEN-ASSOCIATED KEYWDS 2 MOLECULAR PATTERNS, INNATE IMMUNITY, ENDOSOMAL RECEPTOR, RNA BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.A.CRITTON REVDAT 3 11-OCT-23 6V9U 1 REMARK REVDAT 2 07-OCT-20 6V9U 1 JRNL REVDAT 1 12-AUG-20 6V9U 0 JRNL AUTH C.P.MUSSARI,D.S.DODD,R.K.SREEKANTHA,L.PASUNOORI,H.WAN, JRNL AUTH 2 S.L.POSY,D.CRITTON,S.RUEPP,M.SUBRAMANIAN,A.WATSON,P.DAVIES, JRNL AUTH 3 G.L.SCHIEVEN,L.M.SALTER-CID,R.SRIVASTAVA,D.M.TAGORE, JRNL AUTH 4 S.DUDHGAONKAR,M.A.POSS,P.H.CARTER,A.J.DYCKMAN JRNL TITL DISCOVERY OF POTENT AND ORALLY BIOAVAILABLE SMALL MOLECULE JRNL TITL 2 ANTAGONISTS OF TOLL-LIKE RECEPTORS 7/8/9 (TLR7/8/9). JRNL REF ACS MED.CHEM.LETT. V. 11 1751 2020 JRNL REFN ISSN 1948-5875 JRNL PMID 32944143 JRNL DOI 10.1021/ACSMEDCHEMLETT.0C00264 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 131.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 53257 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.297 REMARK 3 R VALUE (WORKING SET) : 0.296 REMARK 3 FREE R VALUE : 0.306 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2652 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3945 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2990 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3754 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.84 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 191 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11360 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 605 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 101.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.59230 REMARK 3 B22 (A**2) : -20.12430 REMARK 3 B33 (A**2) : 18.53200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.16290 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.610 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.965 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.370 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 1.226 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.386 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.841 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.840 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 12345 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 16976 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 4214 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 300 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1824 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 12345 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1795 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 12783 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.50 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.46 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|32 - A|818 A|901 - A|921 } REMARK 3 ORIGIN FOR THE GROUP (A): -6.7671 26.4928 39.8521 REMARK 3 T TENSOR REMARK 3 T11: -0.2109 T22: -0.2230 REMARK 3 T33: -0.2681 T12: -0.0909 REMARK 3 T13: -0.1197 T23: 0.1842 REMARK 3 L TENSOR REMARK 3 L11: 3.8268 L22: 2.0216 REMARK 3 L33: 2.2438 L12: 1.7721 REMARK 3 L13: -0.7146 L23: 0.2393 REMARK 3 S TENSOR REMARK 3 S11: -0.5725 S12: 0.6512 S13: 0.1297 REMARK 3 S21: -0.5292 S22: 0.4286 S23: 0.3581 REMARK 3 S31: 0.0058 S32: -0.5210 S33: 0.1439 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|33 - B|818 B|901 - B|921 } REMARK 3 ORIGIN FOR THE GROUP (A): 28.5105 47.1619 28.8433 REMARK 3 T TENSOR REMARK 3 T11: -0.2937 T22: -0.5565 REMARK 3 T33: -0.3947 T12: -0.1430 REMARK 3 T13: -0.0893 T23: 0.0721 REMARK 3 L TENSOR REMARK 3 L11: 2.0881 L22: 2.3451 REMARK 3 L33: 2.3385 L12: 1.2527 REMARK 3 L13: -1.4172 L23: -1.2368 REMARK 3 S TENSOR REMARK 3 S11: -0.2552 S12: -0.0311 S13: 0.3841 REMARK 3 S21: -0.6170 S22: 0.3908 S23: 0.0925 REMARK 3 S31: 0.2684 S32: -0.0328 S33: -0.1357 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V9U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1000246060. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53326 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 131.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.48300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3W3G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM FORMATE, 20% (W/V) PEG REMARK 280 3,350, 10 MM PRASEODYMIUM(III) ACETATE HYDRATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 81.79500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.37650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 81.79500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.37650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 126.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 TRP A 26 REMARK 465 GLU A 27 REMARK 465 GLU A 28 REMARK 465 ASN A 29 REMARK 465 PHE A 30 REMARK 465 SER A 31 REMARK 465 LYS A 40 REMARK 465 GLN A 41 REMARK 465 ASN A 42 REMARK 465 ASP A 43 REMARK 465 VAL A 100 REMARK 465 GLN A 101 REMARK 465 HIS A 102 REMARK 465 GLN A 103 REMARK 465 ASN A 104 REMARK 465 GLY A 105 REMARK 465 ASN A 106 REMARK 465 PRO A 107 REMARK 465 GLY A 108 REMARK 465 ILE A 109 REMARK 465 GLN A 110 REMARK 465 SER A 111 REMARK 465 ASN A 112 REMARK 465 LYS A 185 REMARK 465 VAL A 186 REMARK 465 ASP A 436 REMARK 465 THR A 437 REMARK 465 ARG A 438 REMARK 465 GLN A 439 REMARK 465 SER A 440 REMARK 465 TYR A 441 REMARK 465 ALA A 442 REMARK 465 ASN A 443 REMARK 465 SER A 444 REMARK 465 SER A 445 REMARK 465 SER A 446 REMARK 465 PHE A 447 REMARK 465 GLN A 448 REMARK 465 ARG A 449 REMARK 465 HIS A 450 REMARK 465 ILE A 451 REMARK 465 ARG A 452 REMARK 465 LYS A 453 REMARK 465 ARG A 454 REMARK 465 ARG A 455 REMARK 465 SER A 456 REMARK 465 THR A 457 REMARK 465 ASP A 458 REMARK 465 PHE A 459 REMARK 465 GLU A 460 REMARK 465 GLU A 757 REMARK 465 THR A 758 REMARK 465 LYS A 759 REMARK 465 THR A 760 REMARK 465 THR A 761 REMARK 465 LEU A 819 REMARK 465 THR A 820 REMARK 465 THR A 821 REMARK 465 CYS A 822 REMARK 465 VAL A 823 REMARK 465 SER A 824 REMARK 465 ASP A 825 REMARK 465 VAL A 826 REMARK 465 THR A 827 REMARK 465 GLU A 828 REMARK 465 PHE A 829 REMARK 465 LEU A 830 REMARK 465 VAL A 831 REMARK 465 PRO A 832 REMARK 465 ARG A 833 REMARK 465 ARG B 23 REMARK 465 SER B 24 REMARK 465 PRO B 25 REMARK 465 TRP B 26 REMARK 465 GLU B 27 REMARK 465 GLU B 28 REMARK 465 ASN B 29 REMARK 465 PHE B 30 REMARK 465 SER B 31 REMARK 465 ARG B 32 REMARK 465 LYS B 40 REMARK 465 GLN B 41 REMARK 465 ASN B 42 REMARK 465 ASP B 43 REMARK 465 SER B 44 REMARK 465 VAL B 100 REMARK 465 GLN B 101 REMARK 465 HIS B 102 REMARK 465 GLN B 103 REMARK 465 ASN B 104 REMARK 465 GLY B 105 REMARK 465 ASN B 106 REMARK 465 PRO B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 109 REMARK 465 GLN B 110 REMARK 465 SER B 111 REMARK 465 ASN B 112 REMARK 465 LYS B 185 REMARK 465 VAL B 186 REMARK 465 LYS B 435 REMARK 465 ASP B 436 REMARK 465 THR B 437 REMARK 465 ARG B 438 REMARK 465 GLN B 439 REMARK 465 SER B 440 REMARK 465 TYR B 441 REMARK 465 ALA B 442 REMARK 465 ASN B 443 REMARK 465 SER B 444 REMARK 465 SER B 445 REMARK 465 SER B 446 REMARK 465 PHE B 447 REMARK 465 GLN B 448 REMARK 465 ARG B 449 REMARK 465 HIS B 450 REMARK 465 ILE B 451 REMARK 465 ARG B 452 REMARK 465 LYS B 453 REMARK 465 ARG B 454 REMARK 465 ARG B 455 REMARK 465 SER B 456 REMARK 465 THR B 457 REMARK 465 ASP B 458 REMARK 465 PHE B 459 REMARK 465 GLU B 460 REMARK 465 GLU B 757 REMARK 465 THR B 758 REMARK 465 LYS B 759 REMARK 465 THR B 760 REMARK 465 THR B 761 REMARK 465 LEU B 819 REMARK 465 THR B 820 REMARK 465 THR B 821 REMARK 465 CYS B 822 REMARK 465 VAL B 823 REMARK 465 SER B 824 REMARK 465 ASP B 825 REMARK 465 VAL B 826 REMARK 465 THR B 827 REMARK 465 GLU B 828 REMARK 465 PHE B 829 REMARK 465 LEU B 830 REMARK 465 VAL B 831 REMARK 465 PRO B 832 REMARK 465 ARG B 833 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 38 CD OE1 OE2 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 GLN A 55 CG CD OE1 NE2 REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 GLN A 87 CG CD OE1 NE2 REMARK 470 LYS A 91 CD CE NZ REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 GLN A 136 CD OE1 NE2 REMARK 470 GLN A 139 CG CD OE1 NE2 REMARK 470 GLU A 150 CG CD OE1 OE2 REMARK 470 LYS A 163 CE NZ REMARK 470 LYS A 173 CE NZ REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 LYS A 189 CD CE NZ REMARK 470 GLU A 198 CG CD OE1 OE2 REMARK 470 LYS A 219 CD CE NZ REMARK 470 ARG A 225 CD NE CZ NH1 NH2 REMARK 470 GLU A 239 CG CD OE1 OE2 REMARK 470 GLU A 240 CG CD OE1 OE2 REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 ASP A 271 CG OD1 OD2 REMARK 470 ARG A 280 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 301 CD CE NZ REMARK 470 LYS A 308 CG CD CE NZ REMARK 470 LYS A 314 CE NZ REMARK 470 ARG A 338 NE CZ NH1 NH2 REMARK 470 LYS A 365 CD CE NZ REMARK 470 ARG A 370 CZ NH1 NH2 REMARK 470 GLU A 381 CD OE1 OE2 REMARK 470 GLN A 392 CG CD OE1 NE2 REMARK 470 LYS A 412 CE NZ REMARK 470 GLU A 421 CG CD OE1 OE2 REMARK 470 LYS A 435 CG CD CE NZ REMARK 470 ARG A 472 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 476 CE NZ REMARK 470 ARG A 569 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 587 CD CE NZ REMARK 470 ASP A 601 CG OD1 OD2 REMARK 470 LYS A 602 CG CD CE NZ REMARK 470 LYS A 608 CG CD CE NZ REMARK 470 ASP A 628 CG OD1 OD2 REMARK 470 LYS A 636 CG CD CE NZ REMARK 470 LYS A 639 CG CD CE NZ REMARK 470 LYS A 652 CE NZ REMARK 470 GLU A 657 CG CD OE1 OE2 REMARK 470 LYS A 677 CG CD CE NZ REMARK 470 GLN A 685 CG CD OE1 NE2 REMARK 470 GLU A 734 CG CD OE1 OE2 REMARK 470 LYS A 739 CE NZ REMARK 470 LYS A 749 CE NZ REMARK 470 LYS A 753 CD CE NZ REMARK 470 LEU A 756 CG CD1 CD2 REMARK 470 LYS A 763 CG CD CE NZ REMARK 470 ARG A 785 CZ NH1 NH2 REMARK 470 LYS A 794 CG CD CE NZ REMARK 470 ARG A 810 CD NE CZ NH1 NH2 REMARK 470 LYS A 812 CG CD CE NZ REMARK 470 GLU A 818 CG CD OE1 OE2 REMARK 470 GLU B 38 CD OE1 OE2 REMARK 470 LYS B 39 CG CD CE NZ REMARK 470 GLU B 48 CD OE1 OE2 REMARK 470 GLN B 55 CG CD OE1 NE2 REMARK 470 GLU B 56 CG CD OE1 OE2 REMARK 470 GLN B 59 CG CD OE1 NE2 REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 GLU B 67 CG CD OE1 OE2 REMARK 470 HIS B 77 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 GLN B 84 CG CD OE1 NE2 REMARK 470 GLN B 87 CG CD OE1 NE2 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 ARG B 128 CD NE CZ NH1 NH2 REMARK 470 GLU B 129 CG CD OE1 OE2 REMARK 470 GLN B 136 CG CD OE1 NE2 REMARK 470 GLN B 139 CG CD OE1 NE2 REMARK 470 GLU B 146 CG CD OE1 OE2 REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 LYS B 163 CE NZ REMARK 470 GLU B 164 CG CD OE1 OE2 REMARK 470 ARG B 168 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 173 CE NZ REMARK 470 GLU B 188 CG CD OE1 OE2 REMARK 470 LYS B 189 CG CD CE NZ REMARK 470 GLU B 193 CG CD OE1 OE2 REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 LYS B 219 CG CD CE NZ REMARK 470 ARG B 225 CD NE CZ NH1 NH2 REMARK 470 LYS B 235 CG CD CE NZ REMARK 470 GLU B 239 CG CD OE1 OE2 REMARK 470 GLU B 240 CD OE1 OE2 REMARK 470 LYS B 243 CG CD CE NZ REMARK 470 ARG B 280 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 301 CG CD CE NZ REMARK 470 LYS B 308 CG CD CE NZ REMARK 470 LYS B 314 CE NZ REMARK 470 ARG B 338 NE CZ NH1 NH2 REMARK 470 LYS B 350 CG CD CE NZ REMARK 470 ARG B 361 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 365 CD CE NZ REMARK 470 ARG B 370 CZ NH1 NH2 REMARK 470 LYS B 412 CE NZ REMARK 470 ARG B 472 CD NE CZ NH1 NH2 REMARK 470 LYS B 476 CD CE NZ REMARK 470 LYS B 533 CE NZ REMARK 470 ARG B 569 CZ NH1 NH2 REMARK 470 LYS B 587 CD CE NZ REMARK 470 LYS B 608 CG CD CE NZ REMARK 470 LYS B 636 CG CD CE NZ REMARK 470 LYS B 639 CD CE NZ REMARK 470 LYS B 652 CE NZ REMARK 470 GLU B 657 CG CD OE1 OE2 REMARK 470 LYS B 677 CG CD CE NZ REMARK 470 GLN B 685 CG CD OE1 NE2 REMARK 470 ARG B 715 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 739 CD CE NZ REMARK 470 LYS B 749 CE NZ REMARK 470 LYS B 753 CG CD CE NZ REMARK 470 LEU B 756 CG CD1 CD2 REMARK 470 LYS B 763 CG CD CE NZ REMARK 470 GLU B 775 CG CD OE1 OE2 REMARK 470 ARG B 785 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 789 CG CD OE1 OE2 REMARK 470 HIS B 790 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 794 CG CD CE NZ REMARK 470 GLN B 809 CG CD OE1 NE2 REMARK 470 ARG B 810 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 812 CG CD CE NZ REMARK 470 GLU B 818 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 602 C - N - CA ANGL. DEV. = 16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 51 74.09 50.75 REMARK 500 LEU A 70 40.33 -105.65 REMARK 500 ASN A 180 -71.51 -88.43 REMARK 500 CYS A 181 79.36 -105.79 REMARK 500 SER A 212 88.13 -67.45 REMARK 500 SER A 214 -27.75 67.12 REMARK 500 CYS A 257 71.16 62.07 REMARK 500 PHE A 261 -159.20 -143.93 REMARK 500 PHE A 283 40.59 -109.39 REMARK 500 MET A 310 78.29 -116.66 REMARK 500 TYR A 322 56.00 -113.89 REMARK 500 LEU A 336 77.92 -117.80 REMARK 500 TYR A 348 150.51 -45.06 REMARK 500 VAL A 378 94.25 64.07 REMARK 500 ASN A 419 58.12 -140.62 REMARK 500 HIS A 464 35.93 -92.44 REMARK 500 ASP A 506 85.13 -69.52 REMARK 500 ALA A 514 53.22 38.53 REMARK 500 ASN A 540 -163.86 -125.56 REMARK 500 ARG A 541 33.28 -140.58 REMARK 500 LEU A 550 -0.65 63.61 REMARK 500 VAL A 573 -152.82 -142.64 REMARK 500 HIS A 575 98.59 60.16 REMARK 500 ASN A 618 -160.54 -108.83 REMARK 500 ASN A 674 -159.64 -109.89 REMARK 500 SER A 733 48.86 -95.17 REMARK 500 GLU A 734 -63.21 -143.89 REMARK 500 ASN A 746 -157.41 -95.42 REMARK 500 LEU A 769 13.31 -141.32 REMARK 500 THR A 777 -122.69 -128.32 REMARK 500 ARG A 797 69.71 38.82 REMARK 500 ASN B 180 -72.26 -88.29 REMARK 500 SER B 212 88.19 -67.58 REMARK 500 SER B 214 -27.90 67.03 REMARK 500 CYS B 257 71.24 62.43 REMARK 500 PHE B 261 -155.40 -144.62 REMARK 500 PHE B 283 40.73 -109.26 REMARK 500 MET B 310 78.46 -116.71 REMARK 500 TYR B 322 56.17 -114.24 REMARK 500 LEU B 336 78.01 -117.92 REMARK 500 TYR B 348 150.49 -44.79 REMARK 500 VAL B 378 94.50 64.44 REMARK 500 ASN B 419 58.46 -140.56 REMARK 500 HIS B 464 35.93 -92.83 REMARK 500 ASP B 506 85.24 -69.61 REMARK 500 ALA B 514 53.41 38.54 REMARK 500 ASN B 540 -163.05 -129.46 REMARK 500 LEU B 550 -0.36 63.28 REMARK 500 VAL B 573 -105.59 -148.91 REMARK 500 THR B 574 -58.51 -136.33 REMARK 500 REMARK 500 THIS ENTRY HAS 62 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 6V9U A 27 827 UNP Q9NR97 TLR8_HUMAN 45 845 DBREF 6V9U B 27 827 UNP Q9NR97 TLR8_HUMAN 45 845 SEQADV 6V9U ARG A 23 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U SER A 24 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U PRO A 25 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U TRP A 26 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U GLU A 828 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U PHE A 829 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U LEU A 830 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U VAL A 831 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U PRO A 832 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U ARG A 833 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U ARG B 23 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U SER B 24 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U PRO B 25 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U TRP B 26 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U GLU B 828 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U PHE B 829 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U LEU B 830 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U VAL B 831 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U PRO B 832 UNP Q9NR97 EXPRESSION TAG SEQADV 6V9U ARG B 833 UNP Q9NR97 EXPRESSION TAG SEQRES 1 A 811 ARG SER PRO TRP GLU GLU ASN PHE SER ARG SER TYR PRO SEQRES 2 A 811 CYS ASP GLU LYS LYS GLN ASN ASP SER VAL ILE ALA GLU SEQRES 3 A 811 CYS SER ASN ARG ARG LEU GLN GLU VAL PRO GLN THR VAL SEQRES 4 A 811 GLY LYS TYR VAL THR GLU LEU ASP LEU SER ASP ASN PHE SEQRES 5 A 811 ILE THR HIS ILE THR ASN GLU SER PHE GLN GLY LEU GLN SEQRES 6 A 811 ASN LEU THR LYS ILE ASN LEU ASN HIS ASN PRO ASN VAL SEQRES 7 A 811 GLN HIS GLN ASN GLY ASN PRO GLY ILE GLN SER ASN GLY SEQRES 8 A 811 LEU ASN ILE THR ASP GLY ALA PHE LEU ASN LEU LYS ASN SEQRES 9 A 811 LEU ARG GLU LEU LEU LEU GLU ASP ASN GLN LEU PRO GLN SEQRES 10 A 811 ILE PRO SER GLY LEU PRO GLU SER LEU THR GLU LEU SER SEQRES 11 A 811 LEU ILE GLN ASN ASN ILE TYR ASN ILE THR LYS GLU GLY SEQRES 12 A 811 ILE SER ARG LEU ILE ASN LEU LYS ASN LEU TYR LEU ALA SEQRES 13 A 811 TRP ASN CYS TYR PHE ASN LYS VAL CYS GLU LYS THR ASN SEQRES 14 A 811 ILE GLU ASP GLY VAL PHE GLU THR LEU THR ASN LEU GLU SEQRES 15 A 811 LEU LEU SER LEU SER PHE ASN SER LEU SER HIS VAL PRO SEQRES 16 A 811 PRO LYS LEU PRO SER SER LEU ARG LYS LEU PHE LEU SER SEQRES 17 A 811 ASN THR GLN ILE LYS TYR ILE SER GLU GLU ASP PHE LYS SEQRES 18 A 811 GLY LEU ILE ASN LEU THR LEU LEU ASP LEU SER GLY ASN SEQRES 19 A 811 CYS PRO ARG CYS PHE ASN ALA PRO PHE PRO CYS VAL PRO SEQRES 20 A 811 CYS ASP GLY GLY ALA SER ILE ASN ILE ASP ARG PHE ALA SEQRES 21 A 811 PHE GLN ASN LEU THR GLN LEU ARG TYR LEU ASN LEU SER SEQRES 22 A 811 SER THR SER LEU ARG LYS ILE ASN ALA ALA TRP PHE LYS SEQRES 23 A 811 ASN MET PRO HIS LEU LYS VAL LEU ASP LEU GLU PHE ASN SEQRES 24 A 811 TYR LEU VAL GLY GLU ILE ALA SER GLY ALA PHE LEU THR SEQRES 25 A 811 MET LEU PRO ARG LEU GLU ILE LEU ASP LEU SER PHE ASN SEQRES 26 A 811 TYR ILE LYS GLY SER TYR PRO GLN HIS ILE ASN ILE SER SEQRES 27 A 811 ARG ASN PHE SER LYS LEU LEU SER LEU ARG ALA LEU HIS SEQRES 28 A 811 LEU ARG GLY TYR VAL PHE GLN GLU LEU ARG GLU ASP ASP SEQRES 29 A 811 PHE GLN PRO LEU MET GLN LEU PRO ASN LEU SER THR ILE SEQRES 30 A 811 ASN LEU GLY ILE ASN PHE ILE LYS GLN ILE ASP PHE LYS SEQRES 31 A 811 LEU PHE GLN ASN PHE SER ASN LEU GLU ILE ILE TYR LEU SEQRES 32 A 811 SER GLU ASN ARG ILE SER PRO LEU VAL LYS ASP THR ARG SEQRES 33 A 811 GLN SER TYR ALA ASN SER SER SER PHE GLN ARG HIS ILE SEQRES 34 A 811 ARG LYS ARG ARG SER THR ASP PHE GLU PHE ASP PRO HIS SEQRES 35 A 811 SER ASN PHE TYR HIS PHE THR ARG PRO LEU ILE LYS PRO SEQRES 36 A 811 GLN CYS ALA ALA TYR GLY LYS ALA LEU ASP LEU SER LEU SEQRES 37 A 811 ASN SER ILE PHE PHE ILE GLY PRO ASN GLN PHE GLU ASN SEQRES 38 A 811 LEU PRO ASP ILE ALA CYS LEU ASN LEU SER ALA ASN SER SEQRES 39 A 811 ASN ALA GLN VAL LEU SER GLY THR GLU PHE SER ALA ILE SEQRES 40 A 811 PRO HIS VAL LYS TYR LEU ASP LEU THR ASN ASN ARG LEU SEQRES 41 A 811 ASP PHE ASP ASN ALA SER ALA LEU THR GLU LEU SER ASP SEQRES 42 A 811 LEU GLU VAL LEU ASP LEU SER TYR ASN SER HIS TYR PHE SEQRES 43 A 811 ARG ILE ALA GLY VAL THR HIS HIS LEU GLU PHE ILE GLN SEQRES 44 A 811 ASN PHE THR ASN LEU LYS VAL LEU ASN LEU SER HIS ASN SEQRES 45 A 811 ASN ILE TYR THR LEU THR ASP LYS TYR ASN LEU GLU SER SEQRES 46 A 811 LYS SER LEU VAL GLU LEU VAL PHE SER GLY ASN ARG LEU SEQRES 47 A 811 ASP ILE LEU TRP ASN ASP ASP ASP ASN ARG TYR ILE SER SEQRES 48 A 811 ILE PHE LYS GLY LEU LYS ASN LEU THR ARG LEU ASP LEU SEQRES 49 A 811 SER LEU ASN ARG LEU LYS HIS ILE PRO ASN GLU ALA PHE SEQRES 50 A 811 LEU ASN LEU PRO ALA SER LEU THR GLU LEU HIS ILE ASN SEQRES 51 A 811 ASP ASN MET LEU LYS PHE PHE ASN TRP THR LEU LEU GLN SEQRES 52 A 811 GLN PHE PRO ARG LEU GLU LEU LEU ASP LEU ARG GLY ASN SEQRES 53 A 811 LYS LEU LEU PHE LEU THR ASP SER LEU SER ASP PHE THR SEQRES 54 A 811 SER SER LEU ARG THR LEU LEU LEU SER HIS ASN ARG ILE SEQRES 55 A 811 SER HIS LEU PRO SER GLY PHE LEU SER GLU VAL SER SER SEQRES 56 A 811 LEU LYS HIS LEU ASP LEU SER SER ASN LEU LEU LYS THR SEQRES 57 A 811 ILE ASN LYS SER ALA LEU GLU THR LYS THR THR THR LYS SEQRES 58 A 811 LEU SER MET LEU GLU LEU HIS GLY ASN PRO PHE GLU CYS SEQRES 59 A 811 THR CYS ASP ILE GLY ASP PHE ARG ARG TRP MET ASP GLU SEQRES 60 A 811 HIS LEU ASN VAL LYS ILE PRO ARG LEU VAL ASP VAL ILE SEQRES 61 A 811 CYS ALA SER PRO GLY ASP GLN ARG GLY LYS SER ILE VAL SEQRES 62 A 811 SER LEU GLU LEU THR THR CYS VAL SER ASP VAL THR GLU SEQRES 63 A 811 PHE LEU VAL PRO ARG SEQRES 1 B 811 ARG SER PRO TRP GLU GLU ASN PHE SER ARG SER TYR PRO SEQRES 2 B 811 CYS ASP GLU LYS LYS GLN ASN ASP SER VAL ILE ALA GLU SEQRES 3 B 811 CYS SER ASN ARG ARG LEU GLN GLU VAL PRO GLN THR VAL SEQRES 4 B 811 GLY LYS TYR VAL THR GLU LEU ASP LEU SER ASP ASN PHE SEQRES 5 B 811 ILE THR HIS ILE THR ASN GLU SER PHE GLN GLY LEU GLN SEQRES 6 B 811 ASN LEU THR LYS ILE ASN LEU ASN HIS ASN PRO ASN VAL SEQRES 7 B 811 GLN HIS GLN ASN GLY ASN PRO GLY ILE GLN SER ASN GLY SEQRES 8 B 811 LEU ASN ILE THR ASP GLY ALA PHE LEU ASN LEU LYS ASN SEQRES 9 B 811 LEU ARG GLU LEU LEU LEU GLU ASP ASN GLN LEU PRO GLN SEQRES 10 B 811 ILE PRO SER GLY LEU PRO GLU SER LEU THR GLU LEU SER SEQRES 11 B 811 LEU ILE GLN ASN ASN ILE TYR ASN ILE THR LYS GLU GLY SEQRES 12 B 811 ILE SER ARG LEU ILE ASN LEU LYS ASN LEU TYR LEU ALA SEQRES 13 B 811 TRP ASN CYS TYR PHE ASN LYS VAL CYS GLU LYS THR ASN SEQRES 14 B 811 ILE GLU ASP GLY VAL PHE GLU THR LEU THR ASN LEU GLU SEQRES 15 B 811 LEU LEU SER LEU SER PHE ASN SER LEU SER HIS VAL PRO SEQRES 16 B 811 PRO LYS LEU PRO SER SER LEU ARG LYS LEU PHE LEU SER SEQRES 17 B 811 ASN THR GLN ILE LYS TYR ILE SER GLU GLU ASP PHE LYS SEQRES 18 B 811 GLY LEU ILE ASN LEU THR LEU LEU ASP LEU SER GLY ASN SEQRES 19 B 811 CYS PRO ARG CYS PHE ASN ALA PRO PHE PRO CYS VAL PRO SEQRES 20 B 811 CYS ASP GLY GLY ALA SER ILE ASN ILE ASP ARG PHE ALA SEQRES 21 B 811 PHE GLN ASN LEU THR GLN LEU ARG TYR LEU ASN LEU SER SEQRES 22 B 811 SER THR SER LEU ARG LYS ILE ASN ALA ALA TRP PHE LYS SEQRES 23 B 811 ASN MET PRO HIS LEU LYS VAL LEU ASP LEU GLU PHE ASN SEQRES 24 B 811 TYR LEU VAL GLY GLU ILE ALA SER GLY ALA PHE LEU THR SEQRES 25 B 811 MET LEU PRO ARG LEU GLU ILE LEU ASP LEU SER PHE ASN SEQRES 26 B 811 TYR ILE LYS GLY SER TYR PRO GLN HIS ILE ASN ILE SER SEQRES 27 B 811 ARG ASN PHE SER LYS LEU LEU SER LEU ARG ALA LEU HIS SEQRES 28 B 811 LEU ARG GLY TYR VAL PHE GLN GLU LEU ARG GLU ASP ASP SEQRES 29 B 811 PHE GLN PRO LEU MET GLN LEU PRO ASN LEU SER THR ILE SEQRES 30 B 811 ASN LEU GLY ILE ASN PHE ILE LYS GLN ILE ASP PHE LYS SEQRES 31 B 811 LEU PHE GLN ASN PHE SER ASN LEU GLU ILE ILE TYR LEU SEQRES 32 B 811 SER GLU ASN ARG ILE SER PRO LEU VAL LYS ASP THR ARG SEQRES 33 B 811 GLN SER TYR ALA ASN SER SER SER PHE GLN ARG HIS ILE SEQRES 34 B 811 ARG LYS ARG ARG SER THR ASP PHE GLU PHE ASP PRO HIS SEQRES 35 B 811 SER ASN PHE TYR HIS PHE THR ARG PRO LEU ILE LYS PRO SEQRES 36 B 811 GLN CYS ALA ALA TYR GLY LYS ALA LEU ASP LEU SER LEU SEQRES 37 B 811 ASN SER ILE PHE PHE ILE GLY PRO ASN GLN PHE GLU ASN SEQRES 38 B 811 LEU PRO ASP ILE ALA CYS LEU ASN LEU SER ALA ASN SER SEQRES 39 B 811 ASN ALA GLN VAL LEU SER GLY THR GLU PHE SER ALA ILE SEQRES 40 B 811 PRO HIS VAL LYS TYR LEU ASP LEU THR ASN ASN ARG LEU SEQRES 41 B 811 ASP PHE ASP ASN ALA SER ALA LEU THR GLU LEU SER ASP SEQRES 42 B 811 LEU GLU VAL LEU ASP LEU SER TYR ASN SER HIS TYR PHE SEQRES 43 B 811 ARG ILE ALA GLY VAL THR HIS HIS LEU GLU PHE ILE GLN SEQRES 44 B 811 ASN PHE THR ASN LEU LYS VAL LEU ASN LEU SER HIS ASN SEQRES 45 B 811 ASN ILE TYR THR LEU THR ASP LYS TYR ASN LEU GLU SER SEQRES 46 B 811 LYS SER LEU VAL GLU LEU VAL PHE SER GLY ASN ARG LEU SEQRES 47 B 811 ASP ILE LEU TRP ASN ASP ASP ASP ASN ARG TYR ILE SER SEQRES 48 B 811 ILE PHE LYS GLY LEU LYS ASN LEU THR ARG LEU ASP LEU SEQRES 49 B 811 SER LEU ASN ARG LEU LYS HIS ILE PRO ASN GLU ALA PHE SEQRES 50 B 811 LEU ASN LEU PRO ALA SER LEU THR GLU LEU HIS ILE ASN SEQRES 51 B 811 ASP ASN MET LEU LYS PHE PHE ASN TRP THR LEU LEU GLN SEQRES 52 B 811 GLN PHE PRO ARG LEU GLU LEU LEU ASP LEU ARG GLY ASN SEQRES 53 B 811 LYS LEU LEU PHE LEU THR ASP SER LEU SER ASP PHE THR SEQRES 54 B 811 SER SER LEU ARG THR LEU LEU LEU SER HIS ASN ARG ILE SEQRES 55 B 811 SER HIS LEU PRO SER GLY PHE LEU SER GLU VAL SER SER SEQRES 56 B 811 LEU LYS HIS LEU ASP LEU SER SER ASN LEU LEU LYS THR SEQRES 57 B 811 ILE ASN LYS SER ALA LEU GLU THR LYS THR THR THR LYS SEQRES 58 B 811 LEU SER MET LEU GLU LEU HIS GLY ASN PRO PHE GLU CYS SEQRES 59 B 811 THR CYS ASP ILE GLY ASP PHE ARG ARG TRP MET ASP GLU SEQRES 60 B 811 HIS LEU ASN VAL LYS ILE PRO ARG LEU VAL ASP VAL ILE SEQRES 61 B 811 CYS ALA SER PRO GLY ASP GLN ARG GLY LYS SER ILE VAL SEQRES 62 B 811 SER LEU GLU LEU THR THR CYS VAL SER ASP VAL THR GLU SEQRES 63 B 811 PHE LEU VAL PRO ARG HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET NAG A 901 14 HET NAG A 902 14 HET NAG A 908 14 HET NAG A 909 14 HET NAG A 912 14 HET NAG A 918 14 HET NAG A 919 14 HET NAG A 920 14 HET NAG A 921 14 HET QSM A 922 58 HET NAG B 901 14 HET NAG B 902 14 HET NAG B 908 14 HET NAG B 909 14 HET NAG B 913 14 HET NAG B 919 14 HET NAG B 920 14 HET NAG B 921 14 HET QSM B 922 58 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM QSM 2-(3,4-DIMETHOXYPHENYL)-5-(PIPERIDIN-4-YL)-3-(PROPAN-2- HETNAM 2 QSM YL)-1H-INDOLE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 29(C8 H15 N O6) FORMUL 3 BMA 5(C6 H12 O6) FORMUL 3 MAN 8(C6 H12 O6) FORMUL 18 QSM 2(C24 H30 N2 O2) FORMUL 28 HOH *40(H2 O) HELIX 1 AA1 ASN A 303 LYS A 308 5 6 HELIX 2 AA2 LEU A 323 SER A 329 1 7 HELIX 3 AA3 GLY A 330 LEU A 336 5 7 HELIX 4 AA4 SER A 360 LEU A 366 5 7 HELIX 5 AA5 PHE A 387 MET A 391 5 5 HELIX 6 AA6 PHE A 411 ASN A 416 1 6 HELIX 7 AA7 LYS A 476 ALA A 481 1 6 HELIX 8 AA8 SER A 565 ILE A 570 1 6 HELIX 9 AA9 GLU A 578 PHE A 583 5 6 HELIX 10 AB1 ARG A 619 TRP A 624 1 6 HELIX 11 AB2 PRO A 655 ASN A 661 1 7 HELIX 12 AB3 ASN A 680 PHE A 687 5 8 HELIX 13 AB4 SER A 706 PHE A 710 5 5 HELIX 14 AB5 ILE A 780 HIS A 790 1 11 HELIX 15 AB6 ARG A 797 VAL A 801 5 5 HELIX 16 AB7 ASN B 303 LYS B 308 5 6 HELIX 17 AB8 LEU B 323 SER B 329 1 7 HELIX 18 AB9 GLY B 330 LEU B 336 5 7 HELIX 19 AC1 SER B 360 LEU B 366 5 7 HELIX 20 AC2 GLU B 384 GLN B 388 5 5 HELIX 21 AC3 PHE B 411 PHE B 417 5 7 HELIX 22 AC4 LYS B 476 ALA B 481 1 6 HELIX 23 AC5 ASN B 564 ILE B 570 1 7 HELIX 24 AC6 PHE B 579 PHE B 583 5 5 HELIX 25 AC7 ARG B 619 TRP B 624 1 6 HELIX 26 AC8 PRO B 655 ASN B 661 1 7 HELIX 27 AC9 ASN B 680 PHE B 687 5 8 HELIX 28 AD1 SER B 706 PHE B 710 5 5 HELIX 29 AD2 ILE B 780 HIS B 790 1 11 HELIX 30 AD3 ARG B 797 VAL B 801 5 5 SHEET 1 AA128 ASP A 37 GLU A 38 0 SHEET 2 AA128 ILE A 46 GLU A 48 -1 O GLU A 48 N ASP A 37 SHEET 3 AA128 GLU A 67 ASP A 69 1 O GLU A 67 N ALA A 47 SHEET 4 AA128 LYS A 91 ASN A 93 1 O LYS A 91 N LEU A 68 SHEET 5 AA128 GLU A 129 LEU A 131 1 O LEU A 131 N ILE A 92 SHEET 6 AA128 GLU A 150 SER A 152 1 O GLU A 150 N LEU A 130 SHEET 7 AA128 ASN A 174 TYR A 176 1 O TYR A 176 N LEU A 151 SHEET 8 AA128 LEU A 205 SER A 207 1 O SER A 207 N LEU A 175 SHEET 9 AA128 LYS A 226 PHE A 228 1 O PHE A 228 N LEU A 206 SHEET 10 AA128 LEU A 250 ASP A 252 1 O ASP A 252 N LEU A 227 SHEET 11 AA128 TYR A 291 ASN A 293 1 O ASN A 293 N LEU A 251 SHEET 12 AA128 VAL A 315 ASP A 317 1 O ASP A 317 N LEU A 292 SHEET 13 AA128 ILE A 341 ASP A 343 1 O ILE A 341 N LEU A 316 SHEET 14 AA128 ALA A 371 HIS A 373 1 O HIS A 373 N LEU A 342 SHEET 15 AA128 THR A 398 ASN A 400 1 O ASN A 400 N LEU A 372 SHEET 16 AA128 ILE A 422 TYR A 424 1 O TYR A 424 N ILE A 399 SHEET 17 AA128 LYS A 484 ASP A 487 1 O ASP A 487 N ILE A 423 SHEET 18 AA128 ILE A 507 ASN A 511 1 O CYS A 509 N LEU A 486 SHEET 19 AA128 TYR A 534 ASP A 536 1 O ASP A 536 N LEU A 510 SHEET 20 AA128 VAL A 558 ASP A 560 1 O VAL A 558 N LEU A 535 SHEET 21 AA128 VAL A 588 ASN A 590 1 O ASN A 590 N LEU A 559 SHEET 22 AA128 GLU A 612 VAL A 614 1 O VAL A 614 N LEU A 589 SHEET 23 AA128 ARG A 643 ASP A 645 1 O ASP A 645 N LEU A 613 SHEET 24 AA128 GLU A 668 HIS A 670 1 O HIS A 670 N LEU A 644 SHEET 25 AA128 LEU A 692 ASP A 694 1 O ASP A 694 N LEU A 669 SHEET 26 AA128 THR A 716 LEU A 718 1 O LEU A 718 N LEU A 693 SHEET 27 AA128 HIS A 740 ASP A 742 1 O ASP A 742 N LEU A 717 SHEET 28 AA128 MET A 766 GLU A 768 1 O GLU A 768 N LEU A 741 SHEET 1 AA2 2 HIS A 77 ILE A 78 0 SHEET 2 AA2 2 ASN A 115 ILE A 116 1 O ASN A 115 N ILE A 78 SHEET 1 AA3 2 ASN A 160 ILE A 161 0 SHEET 2 AA3 2 ASN A 191 ILE A 192 1 O ASN A 191 N ILE A 161 SHEET 1 AA4 2 TYR A 236 ILE A 237 0 SHEET 2 AA4 2 ASN A 277 ILE A 278 1 O ASN A 277 N ILE A 237 SHEET 1 AA5 2 GLU A 381 LEU A 382 0 SHEET 2 AA5 2 GLN A 408 ILE A 409 1 O GLN A 408 N LEU A 382 SHEET 1 AA6 2 GLU A 606 SER A 607 0 SHEET 2 AA6 2 GLY A 637 LEU A 638 1 O GLY A 637 N SER A 607 SHEET 1 AA7 2 PHE A 774 GLU A 775 0 SHEET 2 AA7 2 CYS A 803 SER A 805 1 O ALA A 804 N PHE A 774 SHEET 1 AA828 ASP B 37 GLU B 38 0 SHEET 2 AA828 ILE B 46 GLU B 48 -1 O GLU B 48 N ASP B 37 SHEET 3 AA828 GLU B 67 ASP B 69 1 O GLU B 67 N ALA B 47 SHEET 4 AA828 LYS B 91 ASN B 93 1 O LYS B 91 N LEU B 68 SHEET 5 AA828 GLU B 129 LEU B 131 1 O LEU B 131 N ILE B 92 SHEET 6 AA828 GLU B 150 SER B 152 1 O GLU B 150 N LEU B 130 SHEET 7 AA828 ASN B 174 TYR B 176 1 O TYR B 176 N LEU B 151 SHEET 8 AA828 LEU B 205 SER B 207 1 O SER B 207 N LEU B 175 SHEET 9 AA828 LYS B 226 PHE B 228 1 O PHE B 228 N LEU B 206 SHEET 10 AA828 LEU B 250 ASP B 252 1 O ASP B 252 N LEU B 227 SHEET 11 AA828 TYR B 291 ASN B 293 1 O ASN B 293 N LEU B 251 SHEET 12 AA828 VAL B 315 ASP B 317 1 O ASP B 317 N LEU B 292 SHEET 13 AA828 ILE B 341 ASP B 343 1 O ILE B 341 N LEU B 316 SHEET 14 AA828 ALA B 371 HIS B 373 1 O HIS B 373 N LEU B 342 SHEET 15 AA828 THR B 398 ASN B 400 1 O ASN B 400 N LEU B 372 SHEET 16 AA828 ILE B 422 TYR B 424 1 O TYR B 424 N ILE B 399 SHEET 17 AA828 LYS B 484 ASP B 487 1 O ASP B 487 N ILE B 423 SHEET 18 AA828 ILE B 507 ASN B 511 1 O CYS B 509 N LEU B 486 SHEET 19 AA828 TYR B 534 ASP B 536 1 O ASP B 536 N LEU B 510 SHEET 20 AA828 VAL B 558 ASP B 560 1 O VAL B 558 N LEU B 535 SHEET 21 AA828 VAL B 588 ASN B 590 1 O ASN B 590 N LEU B 559 SHEET 22 AA828 GLU B 612 VAL B 614 1 O VAL B 614 N LEU B 589 SHEET 23 AA828 ARG B 643 ASP B 645 1 O ASP B 645 N LEU B 613 SHEET 24 AA828 GLU B 668 HIS B 670 1 O HIS B 670 N LEU B 644 SHEET 25 AA828 LEU B 692 ASP B 694 1 O ASP B 694 N LEU B 669 SHEET 26 AA828 THR B 716 LEU B 718 1 O LEU B 718 N LEU B 693 SHEET 27 AA828 HIS B 740 ASP B 742 1 O ASP B 742 N LEU B 717 SHEET 28 AA828 MET B 766 GLU B 768 1 O GLU B 768 N LEU B 741 SHEET 1 AA9 2 HIS B 77 ILE B 78 0 SHEET 2 AA9 2 ASN B 115 ILE B 116 1 O ASN B 115 N ILE B 78 SHEET 1 AB1 2 ASN B 160 ILE B 161 0 SHEET 2 AB1 2 ASN B 191 ILE B 192 1 O ASN B 191 N ILE B 161 SHEET 1 AB2 2 TYR B 236 ILE B 237 0 SHEET 2 AB2 2 ASN B 277 ILE B 278 1 O ASN B 277 N ILE B 237 SHEET 1 AB3 2 GLU B 381 LEU B 382 0 SHEET 2 AB3 2 GLN B 408 ILE B 409 1 O GLN B 408 N LEU B 382 SHEET 1 AB4 2 GLU B 606 SER B 607 0 SHEET 2 AB4 2 GLY B 637 LEU B 638 1 O GLY B 637 N SER B 607 SHEET 1 AB5 2 PHE B 774 GLU B 775 0 SHEET 2 AB5 2 CYS B 803 SER B 805 1 O ALA B 804 N PHE B 774 SSBOND 1 CYS A 36 CYS A 49 1555 1555 2.03 SSBOND 2 CYS A 181 CYS A 187 1555 1555 2.03 SSBOND 3 CYS A 257 CYS A 270 1555 1555 2.04 SSBOND 4 CYS A 260 CYS A 267 1555 1555 2.04 SSBOND 5 CYS A 479 CYS A 509 1555 1555 2.03 SSBOND 6 CYS A 776 CYS A 803 1555 1555 2.03 SSBOND 7 CYS B 36 CYS B 49 1555 1555 2.03 SSBOND 8 CYS B 181 CYS B 187 1555 1555 2.03 SSBOND 9 CYS B 257 CYS B 270 1555 1555 2.04 SSBOND 10 CYS B 260 CYS B 267 1555 1555 2.04 SSBOND 11 CYS B 479 CYS B 509 1555 1555 2.03 SSBOND 12 CYS B 776 CYS B 803 1555 1555 2.04 LINK ND2 ASN A 115 C1 NAG A 901 1555 1555 1.44 LINK ND2 ASN A 247 C1 NAG A 920 1555 1555 1.43 LINK ND2 ASN A 285 C1 NAG A 902 1555 1555 1.44 LINK ND2 ASN A 293 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 362 C1 NAG A 921 1555 1555 1.43 LINK ND2 ASN A 395 C1 NAG A 908 1555 1555 1.44 LINK ND2 ASN A 416 C1 NAG A 909 1555 1555 1.43 LINK ND2 ASN A 511 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN A 546 C1 NAG A 912 1555 1555 1.43 LINK ND2 ASN A 590 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN A 640 C1 NAG A 918 1555 1555 1.44 LINK ND2 ASN A 680 C1 NAG A 919 1555 1555 1.43 LINK ND2 ASN B 115 C1 NAG B 901 1555 1555 1.43 LINK ND2 ASN B 285 C1 NAG B 902 1555 1555 1.44 LINK ND2 ASN B 293 C1 NAG F 1 1555 1555 1.43 LINK ND2 ASN B 395 C1 NAG B 908 1555 1555 1.44 LINK ND2 ASN B 416 C1 NAG B 909 1555 1555 1.43 LINK ND2 ASN B 511 C1 NAG G 1 1555 1555 1.43 LINK ND2 ASN B 546 C1 NAG B 913 1555 1555 1.43 LINK ND2 ASN B 582 C1 NAG B 921 1555 1555 1.43 LINK ND2 ASN B 590 C1 NAG H 1 1555 1555 1.43 LINK ND2 ASN B 640 C1 NAG B 919 1555 1555 1.44 LINK ND2 ASN B 680 C1 NAG B 920 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.43 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.41 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.42 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.43 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.43 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.41 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.42 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.41 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.42 LINK O6 BMA F 3 C1 MAN F 5 1555 1555 1.39 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.43 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.43 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.42 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.41 LINK O6 BMA H 3 C1 MAN H 4 1555 1555 1.41 LINK O3 MAN H 4 C1 MAN H 5 1555 1555 1.42 CISPEP 1 TYR A 34 PRO A 35 0 -0.05 CISPEP 2 ASN A 97 PRO A 98 0 0.01 CISPEP 3 CYS A 187 GLU A 188 0 -1.82 CISPEP 4 THR A 600 ASP A 601 0 0.21 CISPEP 5 SER A 805 PRO A 806 0 0.70 CISPEP 6 TYR B 34 PRO B 35 0 0.04 CISPEP 7 ASN B 97 PRO B 98 0 -0.14 CISPEP 8 THR B 600 ASP B 601 0 -0.02 CISPEP 9 ASP B 601 LYS B 602 0 4.44 CISPEP 10 SER B 805 PRO B 806 0 0.82 CRYST1 163.590 86.753 151.399 90.00 119.80 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006113 0.000000 0.003501 0.00000 SCALE2 0.000000 0.011527 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007612 0.00000