data_6VG6 # _entry.id 6VG6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6VG6 pdb_00006vg6 10.2210/pdb6vg6/pdb WWPDB D_1000246329 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VG6 _pdbx_database_status.recvd_initial_deposition_date 2020-01-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jung, H.' 1 ? 'Lee, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochem.J. _citation.journal_id_ASTM BIJOAK _citation.journal_id_CSD 0043 _citation.journal_id_ISSN 1470-8728 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 477 _citation.language ? _citation.page_first 2859 _citation.page_last 2871 _citation.title 'Promutagenic bypass of 7,8-dihydro-8-oxoadenine by translesion synthesis DNA polymerase Dpo4.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1042/BCJ20200449 _citation.pdbx_database_id_PubMed 32686822 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jung, H.' 1 ? primary 'Lee, S.' 2 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6VG6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 52.975 _cell.length_a_esd ? _cell.length_b 97.761 _cell.length_b_esd ? _cell.length_c 101.815 _cell.length_c_esd ? _cell.volume 527288.581 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VG6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3') ; 4096.670 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*CP*AP*TP*(A38)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') ; 5387.492 2 ? ? ? ? 3 polymer man 'DNA polymerase IV' 39019.523 2 2.7.7.7 ? ? ? 4 non-polymer syn "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine" 506.196 2 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 7 water nat water 18.015 22 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Pol IV' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DG)(DG)(DG)(DG)(DA)(DA)(DG)(DG)(DA)(DT)(DT)(DC)' GGGGGAAGGATTC P,B ? 2 polydeoxyribonucleotide no yes '(DT)(DC)(DA)(DT)(A38)(DG)(DA)(DA)(DT)(DC)(DC)(DT)(DT)(DC)(DC)(DC)(DC)(DC)' TCATAGAATCCTTCCCCC T,C ? 3 'polypeptide(L)' no no ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; A,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DA n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DT n 1 12 DT n 1 13 DC n 2 1 DT n 2 2 DC n 2 3 DA n 2 4 DT n 2 5 A38 n 2 6 DG n 2 7 DA n 2 8 DA n 2 9 DT n 2 10 DC n 2 11 DC n 2 12 DT n 2 13 DT n 2 14 DC n 2 15 DC n 2 16 DC n 2 17 DC n 2 18 DC n 3 1 MET n 3 2 ILE n 3 3 VAL n 3 4 LEU n 3 5 PHE n 3 6 VAL n 3 7 ASP n 3 8 PHE n 3 9 ASP n 3 10 TYR n 3 11 PHE n 3 12 TYR n 3 13 ALA n 3 14 GLN n 3 15 VAL n 3 16 GLU n 3 17 GLU n 3 18 VAL n 3 19 LEU n 3 20 ASN n 3 21 PRO n 3 22 SER n 3 23 LEU n 3 24 LYS n 3 25 GLY n 3 26 LYS n 3 27 PRO n 3 28 VAL n 3 29 VAL n 3 30 VAL n 3 31 CYS n 3 32 VAL n 3 33 PHE n 3 34 SER n 3 35 GLY n 3 36 ARG n 3 37 PHE n 3 38 GLU n 3 39 ASP n 3 40 SER n 3 41 GLY n 3 42 ALA n 3 43 VAL n 3 44 ALA n 3 45 THR n 3 46 ALA n 3 47 ASN n 3 48 TYR n 3 49 GLU n 3 50 ALA n 3 51 ARG n 3 52 LYS n 3 53 PHE n 3 54 GLY n 3 55 VAL n 3 56 LYS n 3 57 ALA n 3 58 GLY n 3 59 ILE n 3 60 PRO n 3 61 ILE n 3 62 VAL n 3 63 GLU n 3 64 ALA n 3 65 LYS n 3 66 LYS n 3 67 ILE n 3 68 LEU n 3 69 PRO n 3 70 ASN n 3 71 ALA n 3 72 VAL n 3 73 TYR n 3 74 LEU n 3 75 PRO n 3 76 MET n 3 77 ARG n 3 78 LYS n 3 79 GLU n 3 80 VAL n 3 81 TYR n 3 82 GLN n 3 83 GLN n 3 84 VAL n 3 85 SER n 3 86 SER n 3 87 ARG n 3 88 ILE n 3 89 MET n 3 90 ASN n 3 91 LEU n 3 92 LEU n 3 93 ARG n 3 94 GLU n 3 95 TYR n 3 96 SER n 3 97 GLU n 3 98 LYS n 3 99 ILE n 3 100 GLU n 3 101 ILE n 3 102 ALA n 3 103 SER n 3 104 ILE n 3 105 ASP n 3 106 GLU n 3 107 ALA n 3 108 TYR n 3 109 LEU n 3 110 ASP n 3 111 ILE n 3 112 SER n 3 113 ASP n 3 114 LYS n 3 115 VAL n 3 116 ARG n 3 117 ASP n 3 118 TYR n 3 119 ARG n 3 120 GLU n 3 121 ALA n 3 122 TYR n 3 123 ASN n 3 124 LEU n 3 125 GLY n 3 126 LEU n 3 127 GLU n 3 128 ILE n 3 129 LYS n 3 130 ASN n 3 131 LYS n 3 132 ILE n 3 133 LEU n 3 134 GLU n 3 135 LYS n 3 136 GLU n 3 137 LYS n 3 138 ILE n 3 139 THR n 3 140 VAL n 3 141 THR n 3 142 VAL n 3 143 GLY n 3 144 ILE n 3 145 SER n 3 146 LYS n 3 147 ASN n 3 148 LYS n 3 149 VAL n 3 150 PHE n 3 151 ALA n 3 152 LYS n 3 153 ILE n 3 154 ALA n 3 155 ALA n 3 156 ASP n 3 157 MET n 3 158 ALA n 3 159 LYS n 3 160 PRO n 3 161 ASN n 3 162 GLY n 3 163 ILE n 3 164 LYS n 3 165 VAL n 3 166 ILE n 3 167 ASP n 3 168 ASP n 3 169 GLU n 3 170 GLU n 3 171 VAL n 3 172 LYS n 3 173 ARG n 3 174 LEU n 3 175 ILE n 3 176 ARG n 3 177 GLU n 3 178 LEU n 3 179 ASP n 3 180 ILE n 3 181 ALA n 3 182 ASP n 3 183 VAL n 3 184 PRO n 3 185 GLY n 3 186 ILE n 3 187 GLY n 3 188 ASN n 3 189 ILE n 3 190 THR n 3 191 ALA n 3 192 GLU n 3 193 LYS n 3 194 LEU n 3 195 LYS n 3 196 LYS n 3 197 LEU n 3 198 GLY n 3 199 ILE n 3 200 ASN n 3 201 LYS n 3 202 LEU n 3 203 VAL n 3 204 ASP n 3 205 THR n 3 206 LEU n 3 207 SER n 3 208 ILE n 3 209 GLU n 3 210 PHE n 3 211 ASP n 3 212 LYS n 3 213 LEU n 3 214 LYS n 3 215 GLY n 3 216 MET n 3 217 ILE n 3 218 GLY n 3 219 GLU n 3 220 ALA n 3 221 LYS n 3 222 ALA n 3 223 LYS n 3 224 TYR n 3 225 LEU n 3 226 ILE n 3 227 SER n 3 228 LEU n 3 229 ALA n 3 230 ARG n 3 231 ASP n 3 232 GLU n 3 233 TYR n 3 234 ASN n 3 235 GLU n 3 236 PRO n 3 237 ILE n 3 238 ARG n 3 239 THR n 3 240 ARG n 3 241 VAL n 3 242 ARG n 3 243 LYS n 3 244 SER n 3 245 ILE n 3 246 GLY n 3 247 ARG n 3 248 ILE n 3 249 VAL n 3 250 THR n 3 251 MET n 3 252 LYS n 3 253 ARG n 3 254 ASN n 3 255 SER n 3 256 ARG n 3 257 ASN n 3 258 LEU n 3 259 GLU n 3 260 GLU n 3 261 ILE n 3 262 LYS n 3 263 PRO n 3 264 TYR n 3 265 LEU n 3 266 PHE n 3 267 ARG n 3 268 ALA n 3 269 ILE n 3 270 GLU n 3 271 GLU n 3 272 SER n 3 273 TYR n 3 274 TYR n 3 275 LYS n 3 276 LEU n 3 277 ASP n 3 278 LYS n 3 279 ARG n 3 280 ILE n 3 281 PRO n 3 282 LYS n 3 283 ALA n 3 284 ILE n 3 285 HIS n 3 286 VAL n 3 287 VAL n 3 288 ALA n 3 289 VAL n 3 290 THR n 3 291 GLU n 3 292 ASP n 3 293 LEU n 3 294 ASP n 3 295 ILE n 3 296 VAL n 3 297 SER n 3 298 ARG n 3 299 GLY n 3 300 ARG n 3 301 THR n 3 302 PHE n 3 303 PRO n 3 304 HIS n 3 305 GLY n 3 306 ILE n 3 307 SER n 3 308 LYS n 3 309 GLU n 3 310 THR n 3 311 ALA n 3 312 TYR n 3 313 SER n 3 314 GLU n 3 315 SER n 3 316 VAL n 3 317 LYS n 3 318 LEU n 3 319 LEU n 3 320 GLN n 3 321 LYS n 3 322 ILE n 3 323 LEU n 3 324 GLU n 3 325 GLU n 3 326 ASP n 3 327 GLU n 3 328 ARG n 3 329 LYS n 3 330 ILE n 3 331 ARG n 3 332 ARG n 3 333 ILE n 3 334 GLY n 3 335 VAL n 3 336 ARG n 3 337 PHE n 3 338 SER n 3 339 LYS n 3 340 PHE n 3 341 ILE n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 341 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ;dbh, SSOP1_2570, SULA_0242, SULB_0243, SULC_0242, SULG_01230, SULH_01230, SULI_01230, SULM_01230, SULN_01230, SULO_01240, SULZ_01250 ; _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 13 'Homo sapiens' Human 9606 ? 2 1 sample 1 18 'Homo sapiens' Human 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6VG6 6VG6 ? 1 ? 1 2 PDB 6VG6 6VG6 ? 2 ? 1 3 UNP A0A0E3K6E9_SACSO A0A0E3K6E9 ? 3 ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6VG6 P 1 ? 13 ? 6VG6 1 ? 13 ? 1 13 2 2 6VG6 T 1 ? 18 ? 6VG6 1 ? 18 ? 1 18 3 3 6VG6 A 1 ? 341 ? A0A0E3K6E9 1 ? 341 ? 1 341 4 1 6VG6 B 1 ? 13 ? 6VG6 1 ? 13 ? 1 13 5 2 6VG6 C 1 ? 18 ? 6VG6 1 ? 18 ? 1 18 6 3 6VG6 D 1 ? 341 ? A0A0E3K6E9 1 ? 341 ? 1 341 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A38 'DNA linking' n ;8-OXY DEOXYADENOSINE-5'-MONOPHOSPHATE ; ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XG4 non-polymer . "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine" ? 'C10 H17 N6 O12 P3' 506.196 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VG6 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;16% PEG3350 50 mM Tris 100 mM Magnesium acetate ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-04-06 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6VG6 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.08 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19085 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.059 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.08 _reflns_shell.d_res_low 3.14 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1027 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.461 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.486 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 72.88 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VG6 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.08 _refine.ls_d_res_low 45.15 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19085 _refine.ls_number_reflns_R_free 980 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.75 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.3021 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2544 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1JX4 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.08 _refine_hist.d_res_low 45.15 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 6772 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 5486 _refine_hist.pdbx_number_atoms_nucleic_acid 1186 _refine_hist.pdbx_number_atoms_ligand 78 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0045 ? 6964 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.7763 ? 9612 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0539 ? 1096 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0037 ? 1006 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 25.7428 ? 2866 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.08 _refine_ls_shell.d_res_low 3.24 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 113 _refine_ls_shell.number_reflns_R_work 2531 _refine_ls_shell.percent_reflns_obs 98 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4329 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3683 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6VG6 _struct.title 'Crystal structure of DPO4 with 8-oxoadenine (oxoA) and dGTP*' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VG6 _struct_keywords.text 'Y-family DNA polymerase, Translesion synthesis, TRANSFERASE, TRANSFERASE-DNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 5 ? K N N 6 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 7 ? P N N 7 ? Q N N 7 ? R N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR C 10 ? LEU C 19 ? TYR A 10 LEU A 19 1 ? 10 HELX_P HELX_P2 AA2 ASN C 20 ? LYS C 24 ? ASN A 20 LYS A 24 5 ? 5 HELX_P HELX_P3 AA3 ASN C 47 ? LYS C 52 ? ASN A 47 LYS A 52 1 ? 6 HELX_P HELX_P4 AA4 VAL C 62 ? LEU C 68 ? VAL A 62 LEU A 68 1 ? 7 HELX_P HELX_P5 AA5 ARG C 77 ? ARG C 93 ? ARG A 77 ARG A 93 1 ? 17 HELX_P HELX_P6 AA6 GLU C 94 ? SER C 96 ? GLU A 94 SER A 96 5 ? 3 HELX_P HELX_P7 AA7 ASP C 117 ? GLU C 136 ? ASP A 117 GLU A 136 1 ? 20 HELX_P HELX_P8 AA8 ASN C 147 ? LYS C 159 ? ASN A 147 LYS A 159 1 ? 13 HELX_P HELX_P9 AA9 ASP C 167 ? LEU C 178 ? ASP A 167 LEU A 178 1 ? 12 HELX_P HELX_P10 AB1 ASP C 179 ? VAL C 183 ? ASP A 179 VAL A 183 5 ? 5 HELX_P HELX_P11 AB2 GLY C 187 ? LYS C 196 ? GLY A 187 LYS A 196 1 ? 10 HELX_P HELX_P12 AB3 VAL C 203 ? ILE C 208 ? VAL A 203 ILE A 208 1 ? 6 HELX_P HELX_P13 AB4 GLU C 209 ? GLY C 218 ? GLU A 209 GLY A 218 1 ? 10 HELX_P HELX_P14 AB5 GLY C 218 ? ARG C 230 ? GLY A 218 ARG A 230 1 ? 13 HELX_P HELX_P15 AB6 ASN C 257 ? ASP C 277 ? ASN A 257 ASP A 277 1 ? 21 HELX_P HELX_P16 AB7 SER C 307 ? ASP C 326 ? SER A 307 ASP A 326 1 ? 20 HELX_P HELX_P17 AB8 TYR F 10 ? ASN F 20 ? TYR D 10 ASN D 20 1 ? 11 HELX_P HELX_P18 AB9 PRO F 21 ? LYS F 24 ? PRO D 21 LYS D 24 5 ? 4 HELX_P HELX_P19 AC1 ASN F 47 ? LYS F 52 ? ASN D 47 LYS D 52 1 ? 6 HELX_P HELX_P20 AC2 PRO F 60 ? LEU F 68 ? PRO D 60 LEU D 68 1 ? 9 HELX_P HELX_P21 AC3 ARG F 77 ? ARG F 93 ? ARG D 77 ARG D 93 1 ? 17 HELX_P HELX_P22 AC4 ASP F 117 ? GLU F 136 ? ASP D 117 GLU D 136 1 ? 20 HELX_P HELX_P23 AC5 ASN F 147 ? LYS F 159 ? ASN D 147 LYS D 159 1 ? 13 HELX_P HELX_P24 AC6 ASP F 167 ? ILE F 175 ? ASP D 167 ILE D 175 1 ? 9 HELX_P HELX_P25 AC7 ASP F 179 ? VAL F 183 ? ASP D 179 VAL D 183 5 ? 5 HELX_P HELX_P26 AC8 GLY F 187 ? LEU F 197 ? GLY D 187 LEU D 197 1 ? 11 HELX_P HELX_P27 AC9 VAL F 203 ? ILE F 208 ? VAL D 203 ILE D 208 1 ? 6 HELX_P HELX_P28 AD1 GLU F 209 ? GLY F 218 ? GLU D 209 GLY D 218 1 ? 10 HELX_P HELX_P29 AD2 GLY F 218 ? ARG F 230 ? GLY D 218 ARG D 230 1 ? 13 HELX_P HELX_P30 AD3 ASN F 257 ? ASP F 277 ? ASN D 257 ASP D 277 1 ? 21 HELX_P HELX_P31 AD4 SER F 307 ? ASP F 326 ? SER D 307 ASP D 326 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DT 4 "O3'" ? ? ? 1_555 B A38 5 P ? ? T DT 4 T A38 5 1_555 ? ? ? ? ? ? ? 1.693 ? ? covale2 covale one ? B A38 5 "O3'" ? ? ? 1_555 B DG 6 P ? ? T A38 5 T DG 6 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale3 covale both ? E DT 4 "O3'" ? ? ? 1_555 E A38 5 P ? ? C DT 4 C A38 5 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale4 covale one ? E A38 5 "O3'" ? ? ? 1_555 E DG 6 P ? ? C A38 5 C DG 6 1_555 ? ? ? ? ? ? ? 1.559 ? ? metalc1 metalc ? ? A DC 13 "O5'" ? ? ? 1_555 H MG . MG ? ? P DC 13 P MG 102 1_555 ? ? ? ? ? ? ? 2.500 ? ? metalc2 metalc ? ? G XG4 . O1A ? ? ? 1_555 H MG . MG ? ? P XG4 101 P MG 102 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc3 metalc ? ? G XG4 . O1B ? ? ? 1_555 J MG . MG ? ? P XG4 101 A MG 402 1_555 ? ? ? ? ? ? ? 1.868 ? ? metalc4 metalc ? ? H MG . MG ? ? ? 1_555 C ASP 105 OD1 ? ? P MG 102 A ASP 105 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc5 metalc ? ? H MG . MG ? ? ? 1_555 C GLU 106 OE1 ? ? P MG 102 A GLU 106 1_555 ? ? ? ? ? ? ? 1.998 ? ? metalc6 metalc ? ? C ASP 7 OD1 ? ? ? 1_555 J MG . MG ? ? A ASP 7 A MG 402 1_555 ? ? ? ? ? ? ? 1.966 ? ? metalc7 metalc ? ? C PHE 8 O ? ? ? 1_555 J MG . MG ? ? A PHE 8 A MG 402 1_555 ? ? ? ? ? ? ? 1.819 ? ? metalc8 metalc ? ? C ASP 105 OD2 ? ? ? 1_555 J MG . MG ? ? A ASP 105 A MG 402 1_555 ? ? ? ? ? ? ? 1.912 ? ? metalc9 metalc ? ? F ASP 7 OD2 ? ? ? 1_555 M MG . MG ? ? D ASP 7 D MG 403 1_555 ? ? ? ? ? ? ? 2.870 ? ? metalc10 metalc ? ? F ASP 7 OD1 ? ? ? 1_555 N MG . MG ? ? D ASP 7 D MG 404 1_555 ? ? ? ? ? ? ? 1.978 ? ? metalc11 metalc ? ? F PHE 8 O ? ? ? 1_555 N MG . MG ? ? D PHE 8 D MG 404 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc12 metalc ? ? F ASP 105 OD1 ? ? ? 1_555 M MG . MG ? ? D ASP 105 D MG 403 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc13 metalc ? ? F ASP 105 OD2 ? ? ? 1_555 N MG . MG ? ? D ASP 105 D MG 404 1_555 ? ? ? ? ? ? ? 1.877 ? ? metalc14 metalc ? ? F GLU 106 OE2 ? ? ? 1_555 M MG . MG ? ? D GLU 106 D MG 403 1_555 ? ? ? ? ? ? ? 2.084 ? ? metalc15 metalc ? ? L XG4 . O1A ? ? ? 1_555 M MG . MG ? ? D XG4 402 D MG 403 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc16 metalc ? ? L XG4 . O1A ? ? ? 1_555 N MG . MG ? ? D XG4 402 D MG 404 1_555 ? ? ? ? ? ? ? 2.932 ? ? metalc17 metalc ? ? L XG4 . O1B ? ? ? 1_555 N MG . MG ? ? D XG4 402 D MG 404 1_555 ? ? ? ? ? ? ? 2.425 ? ? hydrog1 hydrog ? ? D DG 1 N1 ? ? ? 1_555 E DC 18 N3 ? ? B DG 1 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D DG 1 N2 ? ? ? 1_555 E DC 18 O2 ? ? B DG 1 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D DG 1 O6 ? ? ? 1_555 E DC 18 N4 ? ? B DG 1 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D DG 2 N1 ? ? ? 1_555 E DC 17 N3 ? ? B DG 2 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D DG 2 N2 ? ? ? 1_555 E DC 17 O2 ? ? B DG 2 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D DG 2 O6 ? ? ? 1_555 E DC 17 N4 ? ? B DG 2 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D DG 3 N1 ? ? ? 1_555 E DC 16 N3 ? ? B DG 3 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D DG 3 N2 ? ? ? 1_555 E DC 16 O2 ? ? B DG 3 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D DG 3 O6 ? ? ? 1_555 E DC 16 N4 ? ? B DG 3 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D DG 4 N2 ? ? ? 1_555 E DC 15 O2 ? ? B DG 4 C DC 15 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog11 hydrog ? ? D DG 5 N1 ? ? ? 1_555 E DC 14 N3 ? ? B DG 5 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D DG 5 N2 ? ? ? 1_555 E DC 14 O2 ? ? B DG 5 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DG 5 O6 ? ? ? 1_555 E DC 14 N4 ? ? B DG 5 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D DA 6 N6 ? ? ? 1_555 E DT 12 O4 ? ? B DA 6 C DT 12 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog15 hydrog ? ? D DA 7 N1 ? ? ? 1_555 E DT 12 N3 ? ? B DA 7 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D DA 7 N6 ? ? ? 1_555 E DT 12 O4 ? ? B DA 7 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D DG 8 N1 ? ? ? 1_555 E DC 11 N3 ? ? B DG 8 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D DG 8 N2 ? ? ? 1_555 E DC 11 O2 ? ? B DG 8 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D DG 8 O6 ? ? ? 1_555 E DC 11 N4 ? ? B DG 8 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? D DG 9 N1 ? ? ? 1_555 E DC 10 N3 ? ? B DG 9 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D DG 9 N2 ? ? ? 1_555 E DC 10 O2 ? ? B DG 9 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DG 9 O6 ? ? ? 1_555 E DC 10 N4 ? ? B DG 9 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D DA 10 N1 ? ? ? 1_555 E DT 9 N3 ? ? B DA 10 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? D DA 10 N6 ? ? ? 1_555 E DT 9 O4 ? ? B DA 10 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D DT 12 N3 ? ? ? 1_555 E DA 7 N1 ? ? B DT 12 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D DT 12 O4 ? ? ? 1_555 E DA 7 N6 ? ? B DT 12 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D DC 13 N3 ? ? ? 1_555 E DG 6 N2 ? ? B DC 13 C DG 6 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog28 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 18 N3 ? ? P DG 1 T DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 18 O2 ? ? P DG 1 T DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 18 N4 ? ? P DG 1 T DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 17 N3 ? ? P DG 2 T DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 17 O2 ? ? P DG 2 T DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 17 N4 ? ? P DG 2 T DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 16 N3 ? ? P DG 3 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 16 O2 ? ? P DG 3 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 16 N4 ? ? P DG 3 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 15 N3 ? ? P DG 4 T DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 15 O2 ? ? P DG 4 T DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 15 N4 ? ? P DG 4 T DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 14 N3 ? ? P DG 5 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 14 O2 ? ? P DG 5 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 14 N4 ? ? P DG 5 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 13 O4 ? ? P DA 6 T DT 13 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog44 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 12 N3 ? ? P DA 7 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 12 O4 ? ? P DA 7 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 11 N3 ? ? P DG 8 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 11 O2 ? ? P DG 8 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 11 N4 ? ? P DG 8 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 10 N3 ? ? P DG 9 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 10 O2 ? ? P DG 9 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 10 N4 ? ? P DG 9 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 9 N3 ? ? P DA 10 T DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 9 O4 ? ? P DA 10 T DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 8 N1 ? ? P DT 11 T DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 8 N6 ? ? P DT 11 T DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 7 N1 ? ? P DT 12 T DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 7 N6 ? ? P DT 12 T DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 6 N1 ? ? P DC 13 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 6 O6 ? ? P DC 13 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 6 N2 ? ? P DC 13 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 159 C . ? LYS 159 A PRO 160 C ? PRO 160 A 1 0.52 2 LYS 159 F . ? LYS 159 D PRO 160 F ? PRO 160 D 1 -2.41 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 4 ? AA4 ? 5 ? AA5 ? 3 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? parallel AA5 1 2 ? anti-parallel AA5 2 3 ? parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE C 99 ? ILE C 101 ? ILE A 99 ILE A 101 AA1 2 GLU C 106 ? ASP C 110 ? GLU A 106 ASP A 110 AA1 3 VAL C 3 ? PHE C 8 ? VAL A 3 PHE A 8 AA1 4 VAL C 140 ? SER C 145 ? VAL A 140 SER A 145 AA1 5 ILE C 163 ? VAL C 165 ? ILE A 163 VAL A 165 AA2 1 GLY C 41 ? ALA C 46 ? GLY A 41 ALA A 46 AA2 2 VAL C 28 ? PHE C 33 ? VAL A 28 PHE A 33 AA2 3 VAL C 72 ? PRO C 75 ? VAL A 72 PRO A 75 AA3 1 SER C 244 ? SER C 255 ? SER A 244 SER A 255 AA3 2 ILE C 330 ? PHE C 340 ? ILE A 330 PHE A 340 AA3 3 PRO C 281 ? THR C 290 ? PRO A 281 THR A 290 AA3 4 ILE C 295 ? THR C 301 ? ILE A 295 THR A 301 AA4 1 ILE F 99 ? SER F 103 ? ILE D 99 SER D 103 AA4 2 GLU F 106 ? ASP F 110 ? GLU D 106 ASP D 110 AA4 3 VAL F 3 ? PHE F 8 ? VAL D 3 PHE D 8 AA4 4 VAL F 140 ? SER F 145 ? VAL D 140 SER D 145 AA4 5 ILE F 163 ? VAL F 165 ? ILE D 163 VAL D 165 AA5 1 GLY F 41 ? ALA F 46 ? GLY D 41 ALA D 46 AA5 2 VAL F 28 ? PHE F 33 ? VAL D 28 PHE D 33 AA5 3 VAL F 72 ? PRO F 75 ? VAL D 72 PRO D 75 AA6 1 SER F 244 ? SER F 255 ? SER D 244 SER D 255 AA6 2 ILE F 330 ? SER F 338 ? ILE D 330 SER D 338 AA6 3 ALA F 283 ? THR F 290 ? ALA D 283 THR D 290 AA6 4 ILE F 295 ? THR F 301 ? ILE D 295 THR D 301 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU C 100 ? N GLU A 100 O TYR C 108 ? O TYR A 108 AA1 2 3 O LEU C 109 ? O LEU A 109 N LEU C 4 ? N LEU A 4 AA1 3 4 N PHE C 5 ? N PHE A 5 O GLY C 143 ? O GLY A 143 AA1 4 5 N ILE C 144 ? N ILE A 144 O LYS C 164 ? O LYS A 164 AA2 1 2 O ALA C 42 ? O ALA A 42 N VAL C 32 ? N VAL A 32 AA2 2 3 N CYS C 31 ? N CYS A 31 O LEU C 74 ? O LEU A 74 AA3 1 2 N ILE C 245 ? N ILE A 245 O PHE C 337 ? O PHE A 337 AA3 2 3 O ARG C 336 ? O ARG A 336 N HIS C 285 ? N HIS A 285 AA3 3 4 N VAL C 286 ? N VAL A 286 O ARG C 298 ? O ARG A 298 AA4 1 2 N GLU F 100 ? N GLU D 100 O TYR F 108 ? O TYR D 108 AA4 2 3 O LEU F 109 ? O LEU D 109 N LEU F 4 ? N LEU D 4 AA4 3 4 N PHE F 5 ? N PHE D 5 O GLY F 143 ? O GLY D 143 AA4 4 5 N VAL F 142 ? N VAL D 142 O LYS F 164 ? O LYS D 164 AA5 1 2 O THR F 45 ? O THR D 45 N VAL F 30 ? N VAL D 30 AA5 2 3 N CYS F 31 ? N CYS D 31 O LEU F 74 ? O LEU D 74 AA6 1 2 N ILE F 245 ? N ILE D 245 O PHE F 337 ? O PHE D 337 AA6 2 3 O ARG F 336 ? O ARG D 336 N HIS F 285 ? N HIS D 285 AA6 3 4 N VAL F 286 ? N VAL D 286 O ARG F 298 ? O ARG D 298 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software P XG4 101 ? 17 'binding site for residue XG4 P 101' AC2 Software P MG 102 ? 5 'binding site for residue MG P 102' AC3 Software A GOL 401 ? 6 'binding site for residue GOL A 401' AC4 Software A MG 402 ? 4 'binding site for residue MG A 402' AC5 Software D GOL 401 ? 4 'binding site for residue GOL D 401' AC6 Software D XG4 402 ? 15 'binding site for residue XG4 D 402' AC7 Software D MG 403 ? 6 'binding site for residue MG D 403' AC8 Software D MG 404 ? 5 'binding site for residue MG D 404' AC9 Software C DT 4 ? 11 'binding site for Di-nucleotide DT C 4 and A38 C 5' AD1 Software C A38 5 ? 14 'binding site for Di-nucleotide A38 C 5 and DG C 6' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ASP C 7 ? ASP A 7 . ? 1_555 ? 2 AC1 17 PHE C 8 ? PHE A 8 . ? 1_555 ? 3 AC1 17 TYR C 10 ? TYR A 10 . ? 1_555 ? 4 AC1 17 PHE C 11 ? PHE A 11 . ? 1_555 ? 5 AC1 17 TYR C 12 ? TYR A 12 . ? 1_555 ? 6 AC1 17 ALA C 44 ? ALA A 44 . ? 1_555 ? 7 AC1 17 THR C 45 ? THR A 45 . ? 1_555 ? 8 AC1 17 TYR C 48 ? TYR A 48 . ? 1_555 ? 9 AC1 17 ARG C 51 ? ARG A 51 . ? 1_555 ? 10 AC1 17 MET C 76 ? MET A 76 . ? 1_555 ? 11 AC1 17 ASP C 105 ? ASP A 105 . ? 1_555 ? 12 AC1 17 LYS C 159 ? LYS A 159 . ? 1_555 ? 13 AC1 17 MG J . ? MG A 402 . ? 1_555 ? 14 AC1 17 DC A 13 ? DC P 13 . ? 1_555 ? 15 AC1 17 MG H . ? MG P 102 . ? 1_555 ? 16 AC1 17 A38 B 5 ? A38 T 5 . ? 1_555 ? 17 AC1 17 DG B 6 ? DG T 6 . ? 1_555 ? 18 AC2 5 ASP C 7 ? ASP A 7 . ? 1_555 ? 19 AC2 5 ASP C 105 ? ASP A 105 . ? 1_555 ? 20 AC2 5 GLU C 106 ? GLU A 106 . ? 1_555 ? 21 AC2 5 DC A 13 ? DC P 13 . ? 1_555 ? 22 AC2 5 XG4 G . ? XG4 P 101 . ? 1_555 ? 23 AC3 6 ASP C 156 ? ASP A 156 . ? 1_555 ? 24 AC3 6 ALA C 181 ? ALA A 181 . ? 1_555 ? 25 AC3 6 ASP C 182 ? ASP A 182 . ? 1_555 ? 26 AC3 6 VAL C 183 ? VAL A 183 . ? 1_555 ? 27 AC3 6 ILE C 186 ? ILE A 186 . ? 1_555 ? 28 AC3 6 DT A 12 ? DT P 12 . ? 1_555 ? 29 AC4 4 ASP C 7 ? ASP A 7 . ? 1_555 ? 30 AC4 4 PHE C 8 ? PHE A 8 . ? 1_555 ? 31 AC4 4 ASP C 105 ? ASP A 105 . ? 1_555 ? 32 AC4 4 XG4 G . ? XG4 P 101 . ? 1_555 ? 33 AC5 4 ASP F 156 ? ASP D 156 . ? 1_555 ? 34 AC5 4 ALA F 181 ? ALA D 181 . ? 1_555 ? 35 AC5 4 VAL F 183 ? VAL D 183 . ? 1_555 ? 36 AC5 4 ILE F 186 ? ILE D 186 . ? 1_555 ? 37 AC6 15 DC D 13 ? DC B 13 . ? 1_555 ? 38 AC6 15 A38 E 5 ? A38 C 5 . ? 1_555 ? 39 AC6 15 DG E 6 ? DG C 6 . ? 1_555 ? 40 AC6 15 ASP F 7 ? ASP D 7 . ? 1_555 ? 41 AC6 15 PHE F 8 ? PHE D 8 . ? 1_555 ? 42 AC6 15 TYR F 10 ? TYR D 10 . ? 1_555 ? 43 AC6 15 TYR F 12 ? TYR D 12 . ? 1_555 ? 44 AC6 15 THR F 45 ? THR D 45 . ? 1_555 ? 45 AC6 15 TYR F 48 ? TYR D 48 . ? 1_555 ? 46 AC6 15 ARG F 51 ? ARG D 51 . ? 1_555 ? 47 AC6 15 MET F 76 ? MET D 76 . ? 1_555 ? 48 AC6 15 ASP F 105 ? ASP D 105 . ? 1_555 ? 49 AC6 15 LYS F 159 ? LYS D 159 . ? 1_555 ? 50 AC6 15 MG M . ? MG D 403 . ? 1_555 ? 51 AC6 15 MG N . ? MG D 404 . ? 1_555 ? 52 AC7 6 DC D 13 ? DC B 13 . ? 1_555 ? 53 AC7 6 ASP F 7 ? ASP D 7 . ? 1_555 ? 54 AC7 6 ASP F 105 ? ASP D 105 . ? 1_555 ? 55 AC7 6 GLU F 106 ? GLU D 106 . ? 1_555 ? 56 AC7 6 XG4 L . ? XG4 D 402 . ? 1_555 ? 57 AC7 6 MG N . ? MG D 404 . ? 1_555 ? 58 AC8 5 ASP F 7 ? ASP D 7 . ? 1_555 ? 59 AC8 5 PHE F 8 ? PHE D 8 . ? 1_555 ? 60 AC8 5 ASP F 105 ? ASP D 105 . ? 1_555 ? 61 AC8 5 XG4 L . ? XG4 D 402 . ? 1_555 ? 62 AC8 5 MG M . ? MG D 403 . ? 1_555 ? 63 AC9 11 DA E 3 ? DA C 3 . ? 1_555 ? 64 AC9 11 DG E 6 ? DG C 6 . ? 1_555 ? 65 AC9 11 SER F 34 ? SER D 34 . ? 1_555 ? 66 AC9 11 PHE F 37 ? PHE D 37 . ? 1_555 ? 67 AC9 11 SER F 40 ? SER D 40 . ? 1_555 ? 68 AC9 11 GLY F 41 ? GLY D 41 . ? 1_555 ? 69 AC9 11 ALA F 42 ? ALA D 42 . ? 1_555 ? 70 AC9 11 PRO F 60 ? PRO D 60 . ? 1_555 ? 71 AC9 11 ARG F 331 ? ARG D 331 . ? 1_555 ? 72 AC9 11 ARG F 332 ? ARG D 332 . ? 1_555 ? 73 AC9 11 XG4 L . ? XG4 D 402 . ? 1_555 ? 74 AD1 14 DT D 12 ? DT B 12 . ? 1_555 ? 75 AD1 14 DC D 13 ? DC B 13 . ? 1_555 ? 76 AD1 14 DT E 4 ? DT C 4 . ? 1_555 ? 77 AD1 14 DA E 7 ? DA C 7 . ? 1_555 ? 78 AD1 14 SER F 34 ? SER D 34 . ? 1_555 ? 79 AD1 14 GLY F 41 ? GLY D 41 . ? 1_555 ? 80 AD1 14 ALA F 42 ? ALA D 42 . ? 1_555 ? 81 AD1 14 ARG F 247 ? ARG D 247 . ? 1_555 ? 82 AD1 14 ILE F 248 ? ILE D 248 . ? 1_555 ? 83 AD1 14 VAL F 249 ? VAL D 249 . ? 1_555 ? 84 AD1 14 THR F 250 ? THR D 250 . ? 1_555 ? 85 AD1 14 ARG F 331 ? ARG D 331 . ? 1_555 ? 86 AD1 14 ARG F 332 ? ARG D 332 . ? 1_555 ? 87 AD1 14 XG4 L . ? XG4 D 402 . ? 1_555 ? # _atom_sites.entry_id 6VG6 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.018877 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010229 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009822 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG P . n A 1 2 DG 2 2 2 DG DG P . n A 1 3 DG 3 3 3 DG DG P . n A 1 4 DG 4 4 4 DG DG P . n A 1 5 DG 5 5 5 DG DG P . n A 1 6 DA 6 6 6 DA DA P . n A 1 7 DA 7 7 7 DA DA P . n A 1 8 DG 8 8 8 DG DG P . n A 1 9 DG 9 9 9 DG DG P . n A 1 10 DA 10 10 10 DA DA P . n A 1 11 DT 11 11 11 DT DT P . n A 1 12 DT 12 12 12 DT DT P . n A 1 13 DC 13 13 13 DC DC P . n B 2 1 DT 1 1 ? ? ? T . n B 2 2 DC 2 2 ? ? ? T . n B 2 3 DA 3 3 3 DA DA T . n B 2 4 DT 4 4 4 DT DT T . n B 2 5 A38 5 5 5 A38 LAG T . n B 2 6 DG 6 6 6 DG DG T . n B 2 7 DA 7 7 7 DA DA T . n B 2 8 DA 8 8 8 DA DA T . n B 2 9 DT 9 9 9 DT DT T . n B 2 10 DC 10 10 10 DC DC T . n B 2 11 DC 11 11 11 DC DC T . n B 2 12 DT 12 12 12 DT DT T . n B 2 13 DT 13 13 13 DT DT T . n B 2 14 DC 14 14 14 DC DC T . n B 2 15 DC 15 15 15 DC DC T . n B 2 16 DC 16 16 16 DC DC T . n B 2 17 DC 17 17 17 DC DC T . n B 2 18 DC 18 18 18 DC DC T . n C 3 1 MET 1 1 1 MET MET A . n C 3 2 ILE 2 2 2 ILE ILE A . n C 3 3 VAL 3 3 3 VAL VAL A . n C 3 4 LEU 4 4 4 LEU LEU A . n C 3 5 PHE 5 5 5 PHE PHE A . n C 3 6 VAL 6 6 6 VAL VAL A . n C 3 7 ASP 7 7 7 ASP ASP A . n C 3 8 PHE 8 8 8 PHE PHE A . n C 3 9 ASP 9 9 9 ASP ASP A . n C 3 10 TYR 10 10 10 TYR TYR A . n C 3 11 PHE 11 11 11 PHE PHE A . n C 3 12 TYR 12 12 12 TYR TYR A . n C 3 13 ALA 13 13 13 ALA ALA A . n C 3 14 GLN 14 14 14 GLN GLN A . n C 3 15 VAL 15 15 15 VAL VAL A . n C 3 16 GLU 16 16 16 GLU GLU A . n C 3 17 GLU 17 17 17 GLU GLU A . n C 3 18 VAL 18 18 18 VAL VAL A . n C 3 19 LEU 19 19 19 LEU LEU A . n C 3 20 ASN 20 20 20 ASN ASN A . n C 3 21 PRO 21 21 21 PRO PRO A . n C 3 22 SER 22 22 22 SER SER A . n C 3 23 LEU 23 23 23 LEU LEU A . n C 3 24 LYS 24 24 24 LYS LYS A . n C 3 25 GLY 25 25 25 GLY GLY A . n C 3 26 LYS 26 26 26 LYS LYS A . n C 3 27 PRO 27 27 27 PRO PRO A . n C 3 28 VAL 28 28 28 VAL VAL A . n C 3 29 VAL 29 29 29 VAL VAL A . n C 3 30 VAL 30 30 30 VAL VAL A . n C 3 31 CYS 31 31 31 CYS CYS A . n C 3 32 VAL 32 32 32 VAL VAL A . n C 3 33 PHE 33 33 33 PHE PHE A . n C 3 34 SER 34 34 34 SER SER A . n C 3 35 GLY 35 35 35 GLY GLY A . n C 3 36 ARG 36 36 36 ARG ARG A . n C 3 37 PHE 37 37 37 PHE PHE A . n C 3 38 GLU 38 38 38 GLU GLU A . n C 3 39 ASP 39 39 39 ASP ASP A . n C 3 40 SER 40 40 40 SER SER A . n C 3 41 GLY 41 41 41 GLY GLY A . n C 3 42 ALA 42 42 42 ALA ALA A . n C 3 43 VAL 43 43 43 VAL VAL A . n C 3 44 ALA 44 44 44 ALA ALA A . n C 3 45 THR 45 45 45 THR THR A . n C 3 46 ALA 46 46 46 ALA ALA A . n C 3 47 ASN 47 47 47 ASN ASN A . n C 3 48 TYR 48 48 48 TYR TYR A . n C 3 49 GLU 49 49 49 GLU GLU A . n C 3 50 ALA 50 50 50 ALA ALA A . n C 3 51 ARG 51 51 51 ARG ARG A . n C 3 52 LYS 52 52 52 LYS LYS A . n C 3 53 PHE 53 53 53 PHE PHE A . n C 3 54 GLY 54 54 54 GLY GLY A . n C 3 55 VAL 55 55 55 VAL VAL A . n C 3 56 LYS 56 56 56 LYS LYS A . n C 3 57 ALA 57 57 57 ALA ALA A . n C 3 58 GLY 58 58 58 GLY GLY A . n C 3 59 ILE 59 59 59 ILE ILE A . n C 3 60 PRO 60 60 60 PRO PRO A . n C 3 61 ILE 61 61 61 ILE ILE A . n C 3 62 VAL 62 62 62 VAL VAL A . n C 3 63 GLU 63 63 63 GLU GLU A . n C 3 64 ALA 64 64 64 ALA ALA A . n C 3 65 LYS 65 65 65 LYS LYS A . n C 3 66 LYS 66 66 66 LYS LYS A . n C 3 67 ILE 67 67 67 ILE ILE A . n C 3 68 LEU 68 68 68 LEU LEU A . n C 3 69 PRO 69 69 69 PRO PRO A . n C 3 70 ASN 70 70 70 ASN ASN A . n C 3 71 ALA 71 71 71 ALA ALA A . n C 3 72 VAL 72 72 72 VAL VAL A . n C 3 73 TYR 73 73 73 TYR TYR A . n C 3 74 LEU 74 74 74 LEU LEU A . n C 3 75 PRO 75 75 75 PRO PRO A . n C 3 76 MET 76 76 76 MET MET A . n C 3 77 ARG 77 77 77 ARG ARG A . n C 3 78 LYS 78 78 78 LYS LYS A . n C 3 79 GLU 79 79 79 GLU GLU A . n C 3 80 VAL 80 80 80 VAL VAL A . n C 3 81 TYR 81 81 81 TYR TYR A . n C 3 82 GLN 82 82 82 GLN GLN A . n C 3 83 GLN 83 83 83 GLN GLN A . n C 3 84 VAL 84 84 84 VAL VAL A . n C 3 85 SER 85 85 85 SER SER A . n C 3 86 SER 86 86 86 SER SER A . n C 3 87 ARG 87 87 87 ARG ARG A . n C 3 88 ILE 88 88 88 ILE ILE A . n C 3 89 MET 89 89 89 MET MET A . n C 3 90 ASN 90 90 90 ASN ASN A . n C 3 91 LEU 91 91 91 LEU LEU A . n C 3 92 LEU 92 92 92 LEU LEU A . n C 3 93 ARG 93 93 93 ARG ARG A . n C 3 94 GLU 94 94 94 GLU GLU A . n C 3 95 TYR 95 95 95 TYR TYR A . n C 3 96 SER 96 96 96 SER SER A . n C 3 97 GLU 97 97 97 GLU GLU A . n C 3 98 LYS 98 98 98 LYS LYS A . n C 3 99 ILE 99 99 99 ILE ILE A . n C 3 100 GLU 100 100 100 GLU GLU A . n C 3 101 ILE 101 101 101 ILE ILE A . n C 3 102 ALA 102 102 102 ALA ALA A . n C 3 103 SER 103 103 103 SER SER A . n C 3 104 ILE 104 104 104 ILE ILE A . n C 3 105 ASP 105 105 105 ASP ASP A . n C 3 106 GLU 106 106 106 GLU GLU A . n C 3 107 ALA 107 107 107 ALA ALA A . n C 3 108 TYR 108 108 108 TYR TYR A . n C 3 109 LEU 109 109 109 LEU LEU A . n C 3 110 ASP 110 110 110 ASP ASP A . n C 3 111 ILE 111 111 111 ILE ILE A . n C 3 112 SER 112 112 112 SER SER A . n C 3 113 ASP 113 113 113 ASP ASP A . n C 3 114 LYS 114 114 114 LYS LYS A . n C 3 115 VAL 115 115 115 VAL VAL A . n C 3 116 ARG 116 116 116 ARG ARG A . n C 3 117 ASP 117 117 117 ASP ASP A . n C 3 118 TYR 118 118 118 TYR TYR A . n C 3 119 ARG 119 119 119 ARG ARG A . n C 3 120 GLU 120 120 120 GLU GLU A . n C 3 121 ALA 121 121 121 ALA ALA A . n C 3 122 TYR 122 122 122 TYR TYR A . n C 3 123 ASN 123 123 123 ASN ASN A . n C 3 124 LEU 124 124 124 LEU LEU A . n C 3 125 GLY 125 125 125 GLY GLY A . n C 3 126 LEU 126 126 126 LEU LEU A . n C 3 127 GLU 127 127 127 GLU GLU A . n C 3 128 ILE 128 128 128 ILE ILE A . n C 3 129 LYS 129 129 129 LYS LYS A . n C 3 130 ASN 130 130 130 ASN ASN A . n C 3 131 LYS 131 131 131 LYS LYS A . n C 3 132 ILE 132 132 132 ILE ILE A . n C 3 133 LEU 133 133 133 LEU LEU A . n C 3 134 GLU 134 134 134 GLU GLU A . n C 3 135 LYS 135 135 135 LYS LYS A . n C 3 136 GLU 136 136 136 GLU GLU A . n C 3 137 LYS 137 137 137 LYS LYS A . n C 3 138 ILE 138 138 138 ILE ILE A . n C 3 139 THR 139 139 139 THR THR A . n C 3 140 VAL 140 140 140 VAL VAL A . n C 3 141 THR 141 141 141 THR THR A . n C 3 142 VAL 142 142 142 VAL VAL A . n C 3 143 GLY 143 143 143 GLY GLY A . n C 3 144 ILE 144 144 144 ILE ILE A . n C 3 145 SER 145 145 145 SER SER A . n C 3 146 LYS 146 146 146 LYS LYS A . n C 3 147 ASN 147 147 147 ASN ASN A . n C 3 148 LYS 148 148 148 LYS LYS A . n C 3 149 VAL 149 149 149 VAL VAL A . n C 3 150 PHE 150 150 150 PHE PHE A . n C 3 151 ALA 151 151 151 ALA ALA A . n C 3 152 LYS 152 152 152 LYS LYS A . n C 3 153 ILE 153 153 153 ILE ILE A . n C 3 154 ALA 154 154 154 ALA ALA A . n C 3 155 ALA 155 155 155 ALA ALA A . n C 3 156 ASP 156 156 156 ASP ASP A . n C 3 157 MET 157 157 157 MET MET A . n C 3 158 ALA 158 158 158 ALA ALA A . n C 3 159 LYS 159 159 159 LYS LYS A . n C 3 160 PRO 160 160 160 PRO PRO A . n C 3 161 ASN 161 161 161 ASN ASN A . n C 3 162 GLY 162 162 162 GLY GLY A . n C 3 163 ILE 163 163 163 ILE ILE A . n C 3 164 LYS 164 164 164 LYS LYS A . n C 3 165 VAL 165 165 165 VAL VAL A . n C 3 166 ILE 166 166 166 ILE ILE A . n C 3 167 ASP 167 167 167 ASP ASP A . n C 3 168 ASP 168 168 168 ASP ASP A . n C 3 169 GLU 169 169 169 GLU GLU A . n C 3 170 GLU 170 170 170 GLU GLU A . n C 3 171 VAL 171 171 171 VAL VAL A . n C 3 172 LYS 172 172 172 LYS LYS A . n C 3 173 ARG 173 173 173 ARG ARG A . n C 3 174 LEU 174 174 174 LEU LEU A . n C 3 175 ILE 175 175 175 ILE ILE A . n C 3 176 ARG 176 176 176 ARG ARG A . n C 3 177 GLU 177 177 177 GLU GLU A . n C 3 178 LEU 178 178 178 LEU LEU A . n C 3 179 ASP 179 179 179 ASP ASP A . n C 3 180 ILE 180 180 180 ILE ILE A . n C 3 181 ALA 181 181 181 ALA ALA A . n C 3 182 ASP 182 182 182 ASP ASP A . n C 3 183 VAL 183 183 183 VAL VAL A . n C 3 184 PRO 184 184 184 PRO PRO A . n C 3 185 GLY 185 185 185 GLY GLY A . n C 3 186 ILE 186 186 186 ILE ILE A . n C 3 187 GLY 187 187 187 GLY GLY A . n C 3 188 ASN 188 188 188 ASN ASN A . n C 3 189 ILE 189 189 189 ILE ILE A . n C 3 190 THR 190 190 190 THR THR A . n C 3 191 ALA 191 191 191 ALA ALA A . n C 3 192 GLU 192 192 192 GLU GLU A . n C 3 193 LYS 193 193 193 LYS LYS A . n C 3 194 LEU 194 194 194 LEU LEU A . n C 3 195 LYS 195 195 195 LYS LYS A . n C 3 196 LYS 196 196 196 LYS LYS A . n C 3 197 LEU 197 197 197 LEU LEU A . n C 3 198 GLY 198 198 198 GLY GLY A . n C 3 199 ILE 199 199 199 ILE ILE A . n C 3 200 ASN 200 200 200 ASN ASN A . n C 3 201 LYS 201 201 201 LYS LYS A . n C 3 202 LEU 202 202 202 LEU LEU A . n C 3 203 VAL 203 203 203 VAL VAL A . n C 3 204 ASP 204 204 204 ASP ASP A . n C 3 205 THR 205 205 205 THR THR A . n C 3 206 LEU 206 206 206 LEU LEU A . n C 3 207 SER 207 207 207 SER SER A . n C 3 208 ILE 208 208 208 ILE ILE A . n C 3 209 GLU 209 209 209 GLU GLU A . n C 3 210 PHE 210 210 210 PHE PHE A . n C 3 211 ASP 211 211 211 ASP ASP A . n C 3 212 LYS 212 212 212 LYS LYS A . n C 3 213 LEU 213 213 213 LEU LEU A . n C 3 214 LYS 214 214 214 LYS LYS A . n C 3 215 GLY 215 215 215 GLY GLY A . n C 3 216 MET 216 216 216 MET MET A . n C 3 217 ILE 217 217 217 ILE ILE A . n C 3 218 GLY 218 218 218 GLY GLY A . n C 3 219 GLU 219 219 219 GLU GLU A . n C 3 220 ALA 220 220 220 ALA ALA A . n C 3 221 LYS 221 221 221 LYS LYS A . n C 3 222 ALA 222 222 222 ALA ALA A . n C 3 223 LYS 223 223 223 LYS LYS A . n C 3 224 TYR 224 224 224 TYR TYR A . n C 3 225 LEU 225 225 225 LEU LEU A . n C 3 226 ILE 226 226 226 ILE ILE A . n C 3 227 SER 227 227 227 SER SER A . n C 3 228 LEU 228 228 228 LEU LEU A . n C 3 229 ALA 229 229 229 ALA ALA A . n C 3 230 ARG 230 230 230 ARG ARG A . n C 3 231 ASP 231 231 231 ASP ASP A . n C 3 232 GLU 232 232 232 GLU GLU A . n C 3 233 TYR 233 233 233 TYR TYR A . n C 3 234 ASN 234 234 234 ASN ASN A . n C 3 235 GLU 235 235 235 GLU GLU A . n C 3 236 PRO 236 236 236 PRO PRO A . n C 3 237 ILE 237 237 237 ILE ILE A . n C 3 238 ARG 238 238 238 ARG ARG A . n C 3 239 THR 239 239 239 THR THR A . n C 3 240 ARG 240 240 240 ARG ARG A . n C 3 241 VAL 241 241 241 VAL VAL A . n C 3 242 ARG 242 242 242 ARG ARG A . n C 3 243 LYS 243 243 243 LYS LYS A . n C 3 244 SER 244 244 244 SER SER A . n C 3 245 ILE 245 245 245 ILE ILE A . n C 3 246 GLY 246 246 246 GLY GLY A . n C 3 247 ARG 247 247 247 ARG ARG A . n C 3 248 ILE 248 248 248 ILE ILE A . n C 3 249 VAL 249 249 249 VAL VAL A . n C 3 250 THR 250 250 250 THR THR A . n C 3 251 MET 251 251 251 MET MET A . n C 3 252 LYS 252 252 252 LYS LYS A . n C 3 253 ARG 253 253 253 ARG ARG A . n C 3 254 ASN 254 254 254 ASN ASN A . n C 3 255 SER 255 255 255 SER SER A . n C 3 256 ARG 256 256 256 ARG ARG A . n C 3 257 ASN 257 257 257 ASN ASN A . n C 3 258 LEU 258 258 258 LEU LEU A . n C 3 259 GLU 259 259 259 GLU GLU A . n C 3 260 GLU 260 260 260 GLU GLU A . n C 3 261 ILE 261 261 261 ILE ILE A . n C 3 262 LYS 262 262 262 LYS LYS A . n C 3 263 PRO 263 263 263 PRO PRO A . n C 3 264 TYR 264 264 264 TYR TYR A . n C 3 265 LEU 265 265 265 LEU LEU A . n C 3 266 PHE 266 266 266 PHE PHE A . n C 3 267 ARG 267 267 267 ARG ARG A . n C 3 268 ALA 268 268 268 ALA ALA A . n C 3 269 ILE 269 269 269 ILE ILE A . n C 3 270 GLU 270 270 270 GLU GLU A . n C 3 271 GLU 271 271 271 GLU GLU A . n C 3 272 SER 272 272 272 SER SER A . n C 3 273 TYR 273 273 273 TYR TYR A . n C 3 274 TYR 274 274 274 TYR TYR A . n C 3 275 LYS 275 275 275 LYS LYS A . n C 3 276 LEU 276 276 276 LEU LEU A . n C 3 277 ASP 277 277 277 ASP ASP A . n C 3 278 LYS 278 278 278 LYS LYS A . n C 3 279 ARG 279 279 279 ARG ARG A . n C 3 280 ILE 280 280 280 ILE ILE A . n C 3 281 PRO 281 281 281 PRO PRO A . n C 3 282 LYS 282 282 282 LYS LYS A . n C 3 283 ALA 283 283 283 ALA ALA A . n C 3 284 ILE 284 284 284 ILE ILE A . n C 3 285 HIS 285 285 285 HIS HIS A . n C 3 286 VAL 286 286 286 VAL VAL A . n C 3 287 VAL 287 287 287 VAL VAL A . n C 3 288 ALA 288 288 288 ALA ALA A . n C 3 289 VAL 289 289 289 VAL VAL A . n C 3 290 THR 290 290 290 THR THR A . n C 3 291 GLU 291 291 291 GLU GLU A . n C 3 292 ASP 292 292 292 ASP ASP A . n C 3 293 LEU 293 293 293 LEU LEU A . n C 3 294 ASP 294 294 294 ASP ASP A . n C 3 295 ILE 295 295 295 ILE ILE A . n C 3 296 VAL 296 296 296 VAL VAL A . n C 3 297 SER 297 297 297 SER SER A . n C 3 298 ARG 298 298 298 ARG ARG A . n C 3 299 GLY 299 299 299 GLY GLY A . n C 3 300 ARG 300 300 300 ARG ARG A . n C 3 301 THR 301 301 301 THR THR A . n C 3 302 PHE 302 302 302 PHE PHE A . n C 3 303 PRO 303 303 303 PRO PRO A . n C 3 304 HIS 304 304 304 HIS HIS A . n C 3 305 GLY 305 305 305 GLY GLY A . n C 3 306 ILE 306 306 306 ILE ILE A . n C 3 307 SER 307 307 307 SER SER A . n C 3 308 LYS 308 308 308 LYS LYS A . n C 3 309 GLU 309 309 309 GLU GLU A . n C 3 310 THR 310 310 310 THR THR A . n C 3 311 ALA 311 311 311 ALA ALA A . n C 3 312 TYR 312 312 312 TYR TYR A . n C 3 313 SER 313 313 313 SER SER A . n C 3 314 GLU 314 314 314 GLU GLU A . n C 3 315 SER 315 315 315 SER SER A . n C 3 316 VAL 316 316 316 VAL VAL A . n C 3 317 LYS 317 317 317 LYS LYS A . n C 3 318 LEU 318 318 318 LEU LEU A . n C 3 319 LEU 319 319 319 LEU LEU A . n C 3 320 GLN 320 320 320 GLN GLN A . n C 3 321 LYS 321 321 321 LYS LYS A . n C 3 322 ILE 322 322 322 ILE ILE A . n C 3 323 LEU 323 323 323 LEU LEU A . n C 3 324 GLU 324 324 324 GLU GLU A . n C 3 325 GLU 325 325 325 GLU GLU A . n C 3 326 ASP 326 326 326 ASP ASP A . n C 3 327 GLU 327 327 327 GLU GLU A . n C 3 328 ARG 328 328 328 ARG ARG A . n C 3 329 LYS 329 329 329 LYS LYS A . n C 3 330 ILE 330 330 330 ILE ILE A . n C 3 331 ARG 331 331 331 ARG ARG A . n C 3 332 ARG 332 332 332 ARG ARG A . n C 3 333 ILE 333 333 333 ILE ILE A . n C 3 334 GLY 334 334 334 GLY GLY A . n C 3 335 VAL 335 335 335 VAL VAL A . n C 3 336 ARG 336 336 336 ARG ARG A . n C 3 337 PHE 337 337 337 PHE PHE A . n C 3 338 SER 338 338 338 SER SER A . n C 3 339 LYS 339 339 339 LYS LYS A . n C 3 340 PHE 340 340 340 PHE PHE A . n C 3 341 ILE 341 341 341 ILE ILE A . n D 1 1 DG 1 1 1 DG DG B . n D 1 2 DG 2 2 2 DG DG B . n D 1 3 DG 3 3 3 DG DG B . n D 1 4 DG 4 4 4 DG DG B . n D 1 5 DG 5 5 5 DG DG B . n D 1 6 DA 6 6 6 DA DA B . n D 1 7 DA 7 7 7 DA DA B . n D 1 8 DG 8 8 8 DG DG B . n D 1 9 DG 9 9 9 DG DG B . n D 1 10 DA 10 10 10 DA DA B . n D 1 11 DT 11 11 11 DT DT B . n D 1 12 DT 12 12 12 DT DT B . n D 1 13 DC 13 13 13 DC DC B . n E 2 1 DT 1 1 ? ? ? C . n E 2 2 DC 2 2 ? ? ? C . n E 2 3 DA 3 3 3 DA DA C . n E 2 4 DT 4 4 4 DT DT C . n E 2 5 A38 5 5 5 A38 LAG C . n E 2 6 DG 6 6 6 DG DG C . n E 2 7 DA 7 7 7 DA DA C . n E 2 8 DA 8 8 8 DA DA C . n E 2 9 DT 9 9 9 DT DT C . n E 2 10 DC 10 10 10 DC DC C . n E 2 11 DC 11 11 11 DC DC C . n E 2 12 DT 12 12 12 DT DT C . n E 2 13 DT 13 13 13 DT DT C . n E 2 14 DC 14 14 14 DC DC C . n E 2 15 DC 15 15 15 DC DC C . n E 2 16 DC 16 16 16 DC DC C . n E 2 17 DC 17 17 17 DC DC C . n E 2 18 DC 18 18 18 DC DC C . n F 3 1 MET 1 1 1 MET MET D . n F 3 2 ILE 2 2 2 ILE ILE D . n F 3 3 VAL 3 3 3 VAL VAL D . n F 3 4 LEU 4 4 4 LEU LEU D . n F 3 5 PHE 5 5 5 PHE PHE D . n F 3 6 VAL 6 6 6 VAL VAL D . n F 3 7 ASP 7 7 7 ASP ASP D . n F 3 8 PHE 8 8 8 PHE PHE D . n F 3 9 ASP 9 9 9 ASP ASP D . n F 3 10 TYR 10 10 10 TYR TYR D . n F 3 11 PHE 11 11 11 PHE PHE D . n F 3 12 TYR 12 12 12 TYR TYR D . n F 3 13 ALA 13 13 13 ALA ALA D . n F 3 14 GLN 14 14 14 GLN GLN D . n F 3 15 VAL 15 15 15 VAL VAL D . n F 3 16 GLU 16 16 16 GLU GLU D . n F 3 17 GLU 17 17 17 GLU GLU D . n F 3 18 VAL 18 18 18 VAL VAL D . n F 3 19 LEU 19 19 19 LEU LEU D . n F 3 20 ASN 20 20 20 ASN ASN D . n F 3 21 PRO 21 21 21 PRO PRO D . n F 3 22 SER 22 22 22 SER SER D . n F 3 23 LEU 23 23 23 LEU LEU D . n F 3 24 LYS 24 24 24 LYS LYS D . n F 3 25 GLY 25 25 25 GLY GLY D . n F 3 26 LYS 26 26 26 LYS LYS D . n F 3 27 PRO 27 27 27 PRO PRO D . n F 3 28 VAL 28 28 28 VAL VAL D . n F 3 29 VAL 29 29 29 VAL VAL D . n F 3 30 VAL 30 30 30 VAL VAL D . n F 3 31 CYS 31 31 31 CYS CYS D . n F 3 32 VAL 32 32 32 VAL VAL D . n F 3 33 PHE 33 33 33 PHE PHE D . n F 3 34 SER 34 34 34 SER SER D . n F 3 35 GLY 35 35 35 GLY GLY D . n F 3 36 ARG 36 36 36 ARG ARG D . n F 3 37 PHE 37 37 37 PHE PHE D . n F 3 38 GLU 38 38 38 GLU GLU D . n F 3 39 ASP 39 39 39 ASP ASP D . n F 3 40 SER 40 40 40 SER SER D . n F 3 41 GLY 41 41 41 GLY GLY D . n F 3 42 ALA 42 42 42 ALA ALA D . n F 3 43 VAL 43 43 43 VAL VAL D . n F 3 44 ALA 44 44 44 ALA ALA D . n F 3 45 THR 45 45 45 THR THR D . n F 3 46 ALA 46 46 46 ALA ALA D . n F 3 47 ASN 47 47 47 ASN ASN D . n F 3 48 TYR 48 48 48 TYR TYR D . n F 3 49 GLU 49 49 49 GLU GLU D . n F 3 50 ALA 50 50 50 ALA ALA D . n F 3 51 ARG 51 51 51 ARG ARG D . n F 3 52 LYS 52 52 52 LYS LYS D . n F 3 53 PHE 53 53 53 PHE PHE D . n F 3 54 GLY 54 54 54 GLY GLY D . n F 3 55 VAL 55 55 55 VAL VAL D . n F 3 56 LYS 56 56 56 LYS LYS D . n F 3 57 ALA 57 57 57 ALA ALA D . n F 3 58 GLY 58 58 58 GLY GLY D . n F 3 59 ILE 59 59 59 ILE ILE D . n F 3 60 PRO 60 60 60 PRO PRO D . n F 3 61 ILE 61 61 61 ILE ILE D . n F 3 62 VAL 62 62 62 VAL VAL D . n F 3 63 GLU 63 63 63 GLU GLU D . n F 3 64 ALA 64 64 64 ALA ALA D . n F 3 65 LYS 65 65 65 LYS LYS D . n F 3 66 LYS 66 66 66 LYS LYS D . n F 3 67 ILE 67 67 67 ILE ILE D . n F 3 68 LEU 68 68 68 LEU LEU D . n F 3 69 PRO 69 69 69 PRO PRO D . n F 3 70 ASN 70 70 70 ASN ASN D . n F 3 71 ALA 71 71 71 ALA ALA D . n F 3 72 VAL 72 72 72 VAL VAL D . n F 3 73 TYR 73 73 73 TYR TYR D . n F 3 74 LEU 74 74 74 LEU LEU D . n F 3 75 PRO 75 75 75 PRO PRO D . n F 3 76 MET 76 76 76 MET MET D . n F 3 77 ARG 77 77 77 ARG ARG D . n F 3 78 LYS 78 78 78 LYS LYS D . n F 3 79 GLU 79 79 79 GLU GLU D . n F 3 80 VAL 80 80 80 VAL VAL D . n F 3 81 TYR 81 81 81 TYR TYR D . n F 3 82 GLN 82 82 82 GLN GLN D . n F 3 83 GLN 83 83 83 GLN GLN D . n F 3 84 VAL 84 84 84 VAL VAL D . n F 3 85 SER 85 85 85 SER SER D . n F 3 86 SER 86 86 86 SER SER D . n F 3 87 ARG 87 87 87 ARG ARG D . n F 3 88 ILE 88 88 88 ILE ILE D . n F 3 89 MET 89 89 89 MET MET D . n F 3 90 ASN 90 90 90 ASN ASN D . n F 3 91 LEU 91 91 91 LEU LEU D . n F 3 92 LEU 92 92 92 LEU LEU D . n F 3 93 ARG 93 93 93 ARG ARG D . n F 3 94 GLU 94 94 94 GLU GLU D . n F 3 95 TYR 95 95 95 TYR TYR D . n F 3 96 SER 96 96 96 SER SER D . n F 3 97 GLU 97 97 97 GLU GLU D . n F 3 98 LYS 98 98 98 LYS LYS D . n F 3 99 ILE 99 99 99 ILE ILE D . n F 3 100 GLU 100 100 100 GLU GLU D . n F 3 101 ILE 101 101 101 ILE ILE D . n F 3 102 ALA 102 102 102 ALA ALA D . n F 3 103 SER 103 103 103 SER SER D . n F 3 104 ILE 104 104 104 ILE ILE D . n F 3 105 ASP 105 105 105 ASP ASP D . n F 3 106 GLU 106 106 106 GLU GLU D . n F 3 107 ALA 107 107 107 ALA ALA D . n F 3 108 TYR 108 108 108 TYR TYR D . n F 3 109 LEU 109 109 109 LEU LEU D . n F 3 110 ASP 110 110 110 ASP ASP D . n F 3 111 ILE 111 111 111 ILE ILE D . n F 3 112 SER 112 112 112 SER SER D . n F 3 113 ASP 113 113 113 ASP ASP D . n F 3 114 LYS 114 114 114 LYS LYS D . n F 3 115 VAL 115 115 115 VAL VAL D . n F 3 116 ARG 116 116 116 ARG ARG D . n F 3 117 ASP 117 117 117 ASP ASP D . n F 3 118 TYR 118 118 118 TYR TYR D . n F 3 119 ARG 119 119 119 ARG ARG D . n F 3 120 GLU 120 120 120 GLU GLU D . n F 3 121 ALA 121 121 121 ALA ALA D . n F 3 122 TYR 122 122 122 TYR TYR D . n F 3 123 ASN 123 123 123 ASN ASN D . n F 3 124 LEU 124 124 124 LEU LEU D . n F 3 125 GLY 125 125 125 GLY GLY D . n F 3 126 LEU 126 126 126 LEU LEU D . n F 3 127 GLU 127 127 127 GLU GLU D . n F 3 128 ILE 128 128 128 ILE ILE D . n F 3 129 LYS 129 129 129 LYS LYS D . n F 3 130 ASN 130 130 130 ASN ASN D . n F 3 131 LYS 131 131 131 LYS LYS D . n F 3 132 ILE 132 132 132 ILE ILE D . n F 3 133 LEU 133 133 133 LEU LEU D . n F 3 134 GLU 134 134 134 GLU GLU D . n F 3 135 LYS 135 135 135 LYS LYS D . n F 3 136 GLU 136 136 136 GLU GLU D . n F 3 137 LYS 137 137 137 LYS LYS D . n F 3 138 ILE 138 138 138 ILE ILE D . n F 3 139 THR 139 139 139 THR THR D . n F 3 140 VAL 140 140 140 VAL VAL D . n F 3 141 THR 141 141 141 THR THR D . n F 3 142 VAL 142 142 142 VAL VAL D . n F 3 143 GLY 143 143 143 GLY GLY D . n F 3 144 ILE 144 144 144 ILE ILE D . n F 3 145 SER 145 145 145 SER SER D . n F 3 146 LYS 146 146 146 LYS LYS D . n F 3 147 ASN 147 147 147 ASN ASN D . n F 3 148 LYS 148 148 148 LYS LYS D . n F 3 149 VAL 149 149 149 VAL VAL D . n F 3 150 PHE 150 150 150 PHE PHE D . n F 3 151 ALA 151 151 151 ALA ALA D . n F 3 152 LYS 152 152 152 LYS LYS D . n F 3 153 ILE 153 153 153 ILE ILE D . n F 3 154 ALA 154 154 154 ALA ALA D . n F 3 155 ALA 155 155 155 ALA ALA D . n F 3 156 ASP 156 156 156 ASP ASP D . n F 3 157 MET 157 157 157 MET MET D . n F 3 158 ALA 158 158 158 ALA ALA D . n F 3 159 LYS 159 159 159 LYS LYS D . n F 3 160 PRO 160 160 160 PRO PRO D . n F 3 161 ASN 161 161 161 ASN ASN D . n F 3 162 GLY 162 162 162 GLY GLY D . n F 3 163 ILE 163 163 163 ILE ILE D . n F 3 164 LYS 164 164 164 LYS LYS D . n F 3 165 VAL 165 165 165 VAL VAL D . n F 3 166 ILE 166 166 166 ILE ILE D . n F 3 167 ASP 167 167 167 ASP ASP D . n F 3 168 ASP 168 168 168 ASP ASP D . n F 3 169 GLU 169 169 169 GLU GLU D . n F 3 170 GLU 170 170 170 GLU GLU D . n F 3 171 VAL 171 171 171 VAL VAL D . n F 3 172 LYS 172 172 172 LYS LYS D . n F 3 173 ARG 173 173 173 ARG ARG D . n F 3 174 LEU 174 174 174 LEU LEU D . n F 3 175 ILE 175 175 175 ILE ILE D . n F 3 176 ARG 176 176 176 ARG ARG D . n F 3 177 GLU 177 177 177 GLU GLU D . n F 3 178 LEU 178 178 178 LEU LEU D . n F 3 179 ASP 179 179 179 ASP ASP D . n F 3 180 ILE 180 180 180 ILE ILE D . n F 3 181 ALA 181 181 181 ALA ALA D . n F 3 182 ASP 182 182 182 ASP ASP D . n F 3 183 VAL 183 183 183 VAL VAL D . n F 3 184 PRO 184 184 184 PRO PRO D . n F 3 185 GLY 185 185 185 GLY GLY D . n F 3 186 ILE 186 186 186 ILE ILE D . n F 3 187 GLY 187 187 187 GLY GLY D . n F 3 188 ASN 188 188 188 ASN ASN D . n F 3 189 ILE 189 189 189 ILE ILE D . n F 3 190 THR 190 190 190 THR THR D . n F 3 191 ALA 191 191 191 ALA ALA D . n F 3 192 GLU 192 192 192 GLU GLU D . n F 3 193 LYS 193 193 193 LYS LYS D . n F 3 194 LEU 194 194 194 LEU LEU D . n F 3 195 LYS 195 195 195 LYS LYS D . n F 3 196 LYS 196 196 196 LYS LYS D . n F 3 197 LEU 197 197 197 LEU LEU D . n F 3 198 GLY 198 198 198 GLY GLY D . n F 3 199 ILE 199 199 199 ILE ILE D . n F 3 200 ASN 200 200 200 ASN ASN D . n F 3 201 LYS 201 201 201 LYS LYS D . n F 3 202 LEU 202 202 202 LEU LEU D . n F 3 203 VAL 203 203 203 VAL VAL D . n F 3 204 ASP 204 204 204 ASP ASP D . n F 3 205 THR 205 205 205 THR THR D . n F 3 206 LEU 206 206 206 LEU LEU D . n F 3 207 SER 207 207 207 SER SER D . n F 3 208 ILE 208 208 208 ILE ILE D . n F 3 209 GLU 209 209 209 GLU GLU D . n F 3 210 PHE 210 210 210 PHE PHE D . n F 3 211 ASP 211 211 211 ASP ASP D . n F 3 212 LYS 212 212 212 LYS LYS D . n F 3 213 LEU 213 213 213 LEU LEU D . n F 3 214 LYS 214 214 214 LYS LYS D . n F 3 215 GLY 215 215 215 GLY GLY D . n F 3 216 MET 216 216 216 MET MET D . n F 3 217 ILE 217 217 217 ILE ILE D . n F 3 218 GLY 218 218 218 GLY GLY D . n F 3 219 GLU 219 219 219 GLU GLU D . n F 3 220 ALA 220 220 220 ALA ALA D . n F 3 221 LYS 221 221 221 LYS LYS D . n F 3 222 ALA 222 222 222 ALA ALA D . n F 3 223 LYS 223 223 223 LYS LYS D . n F 3 224 TYR 224 224 224 TYR TYR D . n F 3 225 LEU 225 225 225 LEU LEU D . n F 3 226 ILE 226 226 226 ILE ILE D . n F 3 227 SER 227 227 227 SER SER D . n F 3 228 LEU 228 228 228 LEU LEU D . n F 3 229 ALA 229 229 229 ALA ALA D . n F 3 230 ARG 230 230 230 ARG ARG D . n F 3 231 ASP 231 231 231 ASP ASP D . n F 3 232 GLU 232 232 232 GLU GLU D . n F 3 233 TYR 233 233 233 TYR TYR D . n F 3 234 ASN 234 234 234 ASN ASN D . n F 3 235 GLU 235 235 235 GLU GLU D . n F 3 236 PRO 236 236 236 PRO PRO D . n F 3 237 ILE 237 237 237 ILE ILE D . n F 3 238 ARG 238 238 238 ARG ARG D . n F 3 239 THR 239 239 239 THR THR D . n F 3 240 ARG 240 240 240 ARG ARG D . n F 3 241 VAL 241 241 241 VAL VAL D . n F 3 242 ARG 242 242 242 ARG ARG D . n F 3 243 LYS 243 243 243 LYS LYS D . n F 3 244 SER 244 244 244 SER SER D . n F 3 245 ILE 245 245 245 ILE ILE D . n F 3 246 GLY 246 246 246 GLY GLY D . n F 3 247 ARG 247 247 247 ARG ARG D . n F 3 248 ILE 248 248 248 ILE ILE D . n F 3 249 VAL 249 249 249 VAL VAL D . n F 3 250 THR 250 250 250 THR THR D . n F 3 251 MET 251 251 251 MET MET D . n F 3 252 LYS 252 252 252 LYS LYS D . n F 3 253 ARG 253 253 253 ARG ARG D . n F 3 254 ASN 254 254 254 ASN ASN D . n F 3 255 SER 255 255 255 SER SER D . n F 3 256 ARG 256 256 256 ARG ARG D . n F 3 257 ASN 257 257 257 ASN ASN D . n F 3 258 LEU 258 258 258 LEU LEU D . n F 3 259 GLU 259 259 259 GLU GLU D . n F 3 260 GLU 260 260 260 GLU GLU D . n F 3 261 ILE 261 261 261 ILE ILE D . n F 3 262 LYS 262 262 262 LYS LYS D . n F 3 263 PRO 263 263 263 PRO PRO D . n F 3 264 TYR 264 264 264 TYR TYR D . n F 3 265 LEU 265 265 265 LEU LEU D . n F 3 266 PHE 266 266 266 PHE PHE D . n F 3 267 ARG 267 267 267 ARG ARG D . n F 3 268 ALA 268 268 268 ALA ALA D . n F 3 269 ILE 269 269 269 ILE ILE D . n F 3 270 GLU 270 270 270 GLU GLU D . n F 3 271 GLU 271 271 271 GLU GLU D . n F 3 272 SER 272 272 272 SER SER D . n F 3 273 TYR 273 273 273 TYR TYR D . n F 3 274 TYR 274 274 274 TYR TYR D . n F 3 275 LYS 275 275 275 LYS LYS D . n F 3 276 LEU 276 276 276 LEU LEU D . n F 3 277 ASP 277 277 277 ASP ASP D . n F 3 278 LYS 278 278 278 LYS LYS D . n F 3 279 ARG 279 279 279 ARG ARG D . n F 3 280 ILE 280 280 280 ILE ILE D . n F 3 281 PRO 281 281 281 PRO PRO D . n F 3 282 LYS 282 282 282 LYS LYS D . n F 3 283 ALA 283 283 283 ALA ALA D . n F 3 284 ILE 284 284 284 ILE ILE D . n F 3 285 HIS 285 285 285 HIS HIS D . n F 3 286 VAL 286 286 286 VAL VAL D . n F 3 287 VAL 287 287 287 VAL VAL D . n F 3 288 ALA 288 288 288 ALA ALA D . n F 3 289 VAL 289 289 289 VAL VAL D . n F 3 290 THR 290 290 290 THR THR D . n F 3 291 GLU 291 291 291 GLU GLU D . n F 3 292 ASP 292 292 292 ASP ASP D . n F 3 293 LEU 293 293 293 LEU LEU D . n F 3 294 ASP 294 294 294 ASP ASP D . n F 3 295 ILE 295 295 295 ILE ILE D . n F 3 296 VAL 296 296 296 VAL VAL D . n F 3 297 SER 297 297 297 SER SER D . n F 3 298 ARG 298 298 298 ARG ARG D . n F 3 299 GLY 299 299 299 GLY GLY D . n F 3 300 ARG 300 300 300 ARG ARG D . n F 3 301 THR 301 301 301 THR THR D . n F 3 302 PHE 302 302 302 PHE PHE D . n F 3 303 PRO 303 303 303 PRO PRO D . n F 3 304 HIS 304 304 304 HIS HIS D . n F 3 305 GLY 305 305 305 GLY GLY D . n F 3 306 ILE 306 306 306 ILE ILE D . n F 3 307 SER 307 307 307 SER SER D . n F 3 308 LYS 308 308 308 LYS LYS D . n F 3 309 GLU 309 309 309 GLU GLU D . n F 3 310 THR 310 310 310 THR THR D . n F 3 311 ALA 311 311 311 ALA ALA D . n F 3 312 TYR 312 312 312 TYR TYR D . n F 3 313 SER 313 313 313 SER SER D . n F 3 314 GLU 314 314 314 GLU GLU D . n F 3 315 SER 315 315 315 SER SER D . n F 3 316 VAL 316 316 316 VAL VAL D . n F 3 317 LYS 317 317 317 LYS LYS D . n F 3 318 LEU 318 318 318 LEU LEU D . n F 3 319 LEU 319 319 319 LEU LEU D . n F 3 320 GLN 320 320 320 GLN GLN D . n F 3 321 LYS 321 321 321 LYS LYS D . n F 3 322 ILE 322 322 322 ILE ILE D . n F 3 323 LEU 323 323 323 LEU LEU D . n F 3 324 GLU 324 324 324 GLU GLU D . n F 3 325 GLU 325 325 325 GLU GLU D . n F 3 326 ASP 326 326 326 ASP ASP D . n F 3 327 GLU 327 327 327 GLU GLU D . n F 3 328 ARG 328 328 328 ARG ARG D . n F 3 329 LYS 329 329 329 LYS LYS D . n F 3 330 ILE 330 330 330 ILE ILE D . n F 3 331 ARG 331 331 331 ARG ARG D . n F 3 332 ARG 332 332 332 ARG ARG D . n F 3 333 ILE 333 333 333 ILE ILE D . n F 3 334 GLY 334 334 334 GLY GLY D . n F 3 335 VAL 335 335 335 VAL VAL D . n F 3 336 ARG 336 336 336 ARG ARG D . n F 3 337 PHE 337 337 337 PHE PHE D . n F 3 338 SER 338 338 338 SER SER D . n F 3 339 LYS 339 339 339 LYS LYS D . n F 3 340 PHE 340 340 340 PHE PHE D . n F 3 341 ILE 341 341 341 ILE ILE D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 XG4 1 101 1 XG4 XG4 P . H 5 MG 1 102 4 MG MG P . I 6 GOL 1 401 401 GOL GOL A . J 5 MG 1 402 5 MG MG A . K 6 GOL 1 401 401 GOL GOL D . L 4 XG4 1 402 2 XG4 XG4 D . M 5 MG 1 403 1 MG MG D . N 5 MG 1 404 2 MG MG D . O 7 HOH 1 201 2 HOH HOH P . P 7 HOH 1 501 25 HOH HOH A . P 7 HOH 2 502 20 HOH HOH A . P 7 HOH 3 503 23 HOH HOH A . P 7 HOH 4 504 27 HOH HOH A . P 7 HOH 5 505 12 HOH HOH A . P 7 HOH 6 506 5 HOH HOH A . P 7 HOH 7 507 22 HOH HOH A . P 7 HOH 8 508 6 HOH HOH A . P 7 HOH 9 509 19 HOH HOH A . P 7 HOH 10 510 26 HOH HOH A . P 7 HOH 11 511 21 HOH HOH A . P 7 HOH 12 512 4 HOH HOH A . P 7 HOH 13 513 15 HOH HOH A . Q 7 HOH 1 101 30 HOH HOH C . Q 7 HOH 2 102 9 HOH HOH C . R 7 HOH 1 501 28 HOH HOH D . R 7 HOH 2 502 7 HOH HOH D . R 7 HOH 3 503 8 HOH HOH D . R 7 HOH 4 504 10 HOH HOH D . R 7 HOH 5 505 29 HOH HOH D . R 7 HOH 6 506 11 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I,J,O,P 2 1 D,E,F,K,L,M,N,Q,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5620 ? 1 MORE -39 ? 1 'SSA (A^2)' 20050 ? 2 'ABSA (A^2)' 5700 ? 2 MORE -39 ? 2 'SSA (A^2)' 19780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O5'" ? A DC 13 ? P DC 13 ? 1_555 MG ? H MG . ? P MG 102 ? 1_555 O1A ? G XG4 . ? P XG4 101 ? 1_555 114.5 ? 2 "O5'" ? A DC 13 ? P DC 13 ? 1_555 MG ? H MG . ? P MG 102 ? 1_555 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 123.9 ? 3 O1A ? G XG4 . ? P XG4 101 ? 1_555 MG ? H MG . ? P MG 102 ? 1_555 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 95.9 ? 4 "O5'" ? A DC 13 ? P DC 13 ? 1_555 MG ? H MG . ? P MG 102 ? 1_555 OE1 ? C GLU 106 ? A GLU 106 ? 1_555 92.4 ? 5 O1A ? G XG4 . ? P XG4 101 ? 1_555 MG ? H MG . ? P MG 102 ? 1_555 OE1 ? C GLU 106 ? A GLU 106 ? 1_555 132.1 ? 6 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 MG ? H MG . ? P MG 102 ? 1_555 OE1 ? C GLU 106 ? A GLU 106 ? 1_555 100.7 ? 7 O1B ? G XG4 . ? P XG4 101 ? 1_555 MG ? J MG . ? A MG 402 ? 1_555 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 122.5 ? 8 O1B ? G XG4 . ? P XG4 101 ? 1_555 MG ? J MG . ? A MG 402 ? 1_555 O ? C PHE 8 ? A PHE 8 ? 1_555 105.1 ? 9 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 MG ? J MG . ? A MG 402 ? 1_555 O ? C PHE 8 ? A PHE 8 ? 1_555 100.8 ? 10 O1B ? G XG4 . ? P XG4 101 ? 1_555 MG ? J MG . ? A MG 402 ? 1_555 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 97.8 ? 11 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 MG ? J MG . ? A MG 402 ? 1_555 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 101.6 ? 12 O ? C PHE 8 ? A PHE 8 ? 1_555 MG ? J MG . ? A MG 402 ? 1_555 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 131.7 ? 13 OD2 ? F ASP 7 ? D ASP 7 ? 1_555 MG ? M MG . ? D MG 403 ? 1_555 OD1 ? F ASP 105 ? D ASP 105 ? 1_555 122.1 ? 14 OD2 ? F ASP 7 ? D ASP 7 ? 1_555 MG ? M MG . ? D MG 403 ? 1_555 OE2 ? F GLU 106 ? D GLU 106 ? 1_555 68.7 ? 15 OD1 ? F ASP 105 ? D ASP 105 ? 1_555 MG ? M MG . ? D MG 403 ? 1_555 OE2 ? F GLU 106 ? D GLU 106 ? 1_555 136.2 ? 16 OD2 ? F ASP 7 ? D ASP 7 ? 1_555 MG ? M MG . ? D MG 403 ? 1_555 O1A ? L XG4 . ? D XG4 402 ? 1_555 89.6 ? 17 OD1 ? F ASP 105 ? D ASP 105 ? 1_555 MG ? M MG . ? D MG 403 ? 1_555 O1A ? L XG4 . ? D XG4 402 ? 1_555 88.9 ? 18 OE2 ? F GLU 106 ? D GLU 106 ? 1_555 MG ? M MG . ? D MG 403 ? 1_555 O1A ? L XG4 . ? D XG4 402 ? 1_555 134.9 ? 19 OD1 ? F ASP 7 ? D ASP 7 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O ? F PHE 8 ? D PHE 8 ? 1_555 91.8 ? 20 OD1 ? F ASP 7 ? D ASP 7 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 OD2 ? F ASP 105 ? D ASP 105 ? 1_555 155.8 ? 21 O ? F PHE 8 ? D PHE 8 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 OD2 ? F ASP 105 ? D ASP 105 ? 1_555 110.4 ? 22 OD1 ? F ASP 7 ? D ASP 7 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O1A ? L XG4 . ? D XG4 402 ? 1_555 99.1 ? 23 O ? F PHE 8 ? D PHE 8 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O1A ? L XG4 . ? D XG4 402 ? 1_555 154.4 ? 24 OD2 ? F ASP 105 ? D ASP 105 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O1A ? L XG4 . ? D XG4 402 ? 1_555 64.9 ? 25 OD1 ? F ASP 7 ? D ASP 7 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O1B ? L XG4 . ? D XG4 402 ? 1_555 109.8 ? 26 O ? F PHE 8 ? D PHE 8 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O1B ? L XG4 . ? D XG4 402 ? 1_555 91.8 ? 27 OD2 ? F ASP 105 ? D ASP 105 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O1B ? L XG4 . ? D XG4 402 ? 1_555 79.9 ? 28 O1A ? L XG4 . ? D XG4 402 ? 1_555 MG ? N MG . ? D MG 404 ? 1_555 O1B ? L XG4 . ? D XG4 402 ? 1_555 62.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-01-06 2 'Structure model' 1 1 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_entry_details.entry_id 6VG6 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OH D TYR 273 ? ? O D ILE 306 ? ? 2.13 2 1 O2P T A38 5 ? ? NH1 A ARG 331 ? ? 2.15 3 1 NH1 D ARG 173 ? ? OE1 D GLU 177 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" T DT 4 ? ? P T A38 5 ? ? 1.693 1.607 0.086 0.012 Y 2 1 "O3'" T DG 6 ? ? P T DA 7 ? ? 1.516 1.607 -0.091 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" P DA 6 ? ? "C2'" P DA 6 ? ? "C1'" P DA 6 ? ? 97.34 102.40 -5.06 0.80 N 2 1 "O4'" P DA 6 ? ? "C1'" P DA 6 ? ? N9 P DA 6 ? ? 110.84 108.30 2.54 0.30 N 3 1 "O4'" P DT 12 ? ? "C1'" P DT 12 ? ? N1 P DT 12 ? ? 110.47 108.30 2.17 0.30 N 4 1 "C3'" T DT 4 ? ? "O3'" T DT 4 ? ? P T A38 5 ? ? 136.16 119.70 16.46 1.20 Y 5 1 "O3'" T DT 4 ? ? P T A38 5 ? ? "O5'" T A38 5 ? ? 146.68 104.00 42.68 1.90 Y 6 1 "O3'" T A38 5 ? ? P T DG 6 ? ? "O5'" T DG 6 ? ? 85.00 104.00 -19.00 1.90 Y 7 1 "O3'" T A38 5 ? ? P T DG 6 ? ? OP2 T DG 6 ? ? 144.72 110.50 34.22 1.10 Y 8 1 "O5'" T DG 6 ? ? P T DG 6 ? ? OP2 T DG 6 ? ? 97.65 105.70 -8.05 0.90 N 9 1 "C3'" C DT 4 ? ? "O3'" C DT 4 ? ? P C A38 5 ? ? 135.29 119.70 15.59 1.20 Y 10 1 "O3'" C DT 4 ? ? P C A38 5 ? ? "O5'" C A38 5 ? ? 133.83 104.00 29.83 1.90 Y 11 1 "C3'" C A38 5 ? ? "O3'" C A38 5 ? ? P C DG 6 ? ? 153.35 119.70 33.65 1.20 Y 12 1 "O3'" C A38 5 ? ? P C DG 6 ? ? "O5'" C DG 6 ? ? 79.14 104.00 -24.86 1.90 Y 13 1 "O3'" C A38 5 ? ? P C DG 6 ? ? OP2 C DG 6 ? ? 125.23 110.50 14.73 1.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 10 ? ? 27.85 64.03 2 1 LYS A 24 ? ? -57.16 109.26 3 1 PHE A 53 ? ? -81.54 33.92 4 1 GLU A 94 ? ? -69.12 6.49 5 1 ARG A 116 ? ? -153.75 12.87 6 1 SER A 145 ? ? -156.80 -159.85 7 1 ASN A 234 ? ? -60.43 -108.27 8 1 GLU A 235 ? ? 63.62 108.71 9 1 PRO A 236 ? ? -100.32 -168.33 10 1 LEU A 276 ? ? -68.89 -73.80 11 1 ASP A 277 ? ? 52.96 97.03 12 1 LYS A 278 ? ? 77.21 -7.08 13 1 ARG A 300 ? ? -171.74 146.55 14 1 TYR D 10 ? ? 23.39 69.29 15 1 PHE D 53 ? ? -85.73 43.33 16 1 SER D 96 ? ? -173.46 145.72 17 1 SER D 103 ? ? -162.45 -158.37 18 1 SER D 145 ? ? -165.67 -153.35 19 1 ASP D 277 ? ? 57.21 90.39 20 1 LYS D 278 ? ? 75.89 -0.39 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 T DT 1 ? B DT 1 2 1 Y 1 T DC 2 ? B DC 2 3 1 Y 1 C DT 1 ? E DT 1 4 1 Y 1 C DC 2 ? E DC 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A38 O3P O N N 1 A38 P P N N 2 A38 O1P O N N 3 A38 O2P O N N 4 A38 "O5'" O N N 5 A38 "C5'" C N N 6 A38 "C4'" C N R 7 A38 "O4'" O N N 8 A38 "C3'" C N S 9 A38 "O3'" O N N 10 A38 "C2'" C N N 11 A38 "C1'" C N R 12 A38 N9 N N N 13 A38 C8 C N N 14 A38 N7 N N N 15 A38 C5 C Y N 16 A38 C6 C Y N 17 A38 N6 N N N 18 A38 N1 N Y N 19 A38 C2 C Y N 20 A38 N3 N Y N 21 A38 C4 C Y N 22 A38 O O N N 23 A38 H3P H N N 24 A38 H2P H N N 25 A38 "H5'1" H N N 26 A38 "H5'2" H N N 27 A38 "H4'" H N N 28 A38 "H3'" H N N 29 A38 HA H N N 30 A38 "H2'1" H N N 31 A38 "H2'2" H N N 32 A38 "H1'" H N N 33 A38 H7 H N N 34 A38 H6N1 H N N 35 A38 H6N2 H N N 36 A38 H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 GOL C1 C N N 317 GOL O1 O N N 318 GOL C2 C N N 319 GOL O2 O N N 320 GOL C3 C N N 321 GOL O3 O N N 322 GOL H11 H N N 323 GOL H12 H N N 324 GOL HO1 H N N 325 GOL H2 H N N 326 GOL HO2 H N N 327 GOL H31 H N N 328 GOL H32 H N N 329 GOL HO3 H N N 330 HIS N N N N 331 HIS CA C N S 332 HIS C C N N 333 HIS O O N N 334 HIS CB C N N 335 HIS CG C Y N 336 HIS ND1 N Y N 337 HIS CD2 C Y N 338 HIS CE1 C Y N 339 HIS NE2 N Y N 340 HIS OXT O N N 341 HIS H H N N 342 HIS H2 H N N 343 HIS HA H N N 344 HIS HB2 H N N 345 HIS HB3 H N N 346 HIS HD1 H N N 347 HIS HD2 H N N 348 HIS HE1 H N N 349 HIS HE2 H N N 350 HIS HXT H N N 351 HOH O O N N 352 HOH H1 H N N 353 HOH H2 H N N 354 ILE N N N N 355 ILE CA C N S 356 ILE C C N N 357 ILE O O N N 358 ILE CB C N S 359 ILE CG1 C N N 360 ILE CG2 C N N 361 ILE CD1 C N N 362 ILE OXT O N N 363 ILE H H N N 364 ILE H2 H N N 365 ILE HA H N N 366 ILE HB H N N 367 ILE HG12 H N N 368 ILE HG13 H N N 369 ILE HG21 H N N 370 ILE HG22 H N N 371 ILE HG23 H N N 372 ILE HD11 H N N 373 ILE HD12 H N N 374 ILE HD13 H N N 375 ILE HXT H N N 376 LEU N N N N 377 LEU CA C N S 378 LEU C C N N 379 LEU O O N N 380 LEU CB C N N 381 LEU CG C N N 382 LEU CD1 C N N 383 LEU CD2 C N N 384 LEU OXT O N N 385 LEU H H N N 386 LEU H2 H N N 387 LEU HA H N N 388 LEU HB2 H N N 389 LEU HB3 H N N 390 LEU HG H N N 391 LEU HD11 H N N 392 LEU HD12 H N N 393 LEU HD13 H N N 394 LEU HD21 H N N 395 LEU HD22 H N N 396 LEU HD23 H N N 397 LEU HXT H N N 398 LYS N N N N 399 LYS CA C N S 400 LYS C C N N 401 LYS O O N N 402 LYS CB C N N 403 LYS CG C N N 404 LYS CD C N N 405 LYS CE C N N 406 LYS NZ N N N 407 LYS OXT O N N 408 LYS H H N N 409 LYS H2 H N N 410 LYS HA H N N 411 LYS HB2 H N N 412 LYS HB3 H N N 413 LYS HG2 H N N 414 LYS HG3 H N N 415 LYS HD2 H N N 416 LYS HD3 H N N 417 LYS HE2 H N N 418 LYS HE3 H N N 419 LYS HZ1 H N N 420 LYS HZ2 H N N 421 LYS HZ3 H N N 422 LYS HXT H N N 423 MET N N N N 424 MET CA C N S 425 MET C C N N 426 MET O O N N 427 MET CB C N N 428 MET CG C N N 429 MET SD S N N 430 MET CE C N N 431 MET OXT O N N 432 MET H H N N 433 MET H2 H N N 434 MET HA H N N 435 MET HB2 H N N 436 MET HB3 H N N 437 MET HG2 H N N 438 MET HG3 H N N 439 MET HE1 H N N 440 MET HE2 H N N 441 MET HE3 H N N 442 MET HXT H N N 443 MG MG MG N N 444 PHE N N N N 445 PHE CA C N S 446 PHE C C N N 447 PHE O O N N 448 PHE CB C N N 449 PHE CG C Y N 450 PHE CD1 C Y N 451 PHE CD2 C Y N 452 PHE CE1 C Y N 453 PHE CE2 C Y N 454 PHE CZ C Y N 455 PHE OXT O N N 456 PHE H H N N 457 PHE H2 H N N 458 PHE HA H N N 459 PHE HB2 H N N 460 PHE HB3 H N N 461 PHE HD1 H N N 462 PHE HD2 H N N 463 PHE HE1 H N N 464 PHE HE2 H N N 465 PHE HZ H N N 466 PHE HXT H N N 467 PRO N N N N 468 PRO CA C N S 469 PRO C C N N 470 PRO O O N N 471 PRO CB C N N 472 PRO CG C N N 473 PRO CD C N N 474 PRO OXT O N N 475 PRO H H N N 476 PRO HA H N N 477 PRO HB2 H N N 478 PRO HB3 H N N 479 PRO HG2 H N N 480 PRO HG3 H N N 481 PRO HD2 H N N 482 PRO HD3 H N N 483 PRO HXT H N N 484 SER N N N N 485 SER CA C N S 486 SER C C N N 487 SER O O N N 488 SER CB C N N 489 SER OG O N N 490 SER OXT O N N 491 SER H H N N 492 SER H2 H N N 493 SER HA H N N 494 SER HB2 H N N 495 SER HB3 H N N 496 SER HG H N N 497 SER HXT H N N 498 THR N N N N 499 THR CA C N S 500 THR C C N N 501 THR O O N N 502 THR CB C N R 503 THR OG1 O N N 504 THR CG2 C N N 505 THR OXT O N N 506 THR H H N N 507 THR H2 H N N 508 THR HA H N N 509 THR HB H N N 510 THR HG1 H N N 511 THR HG21 H N N 512 THR HG22 H N N 513 THR HG23 H N N 514 THR HXT H N N 515 TYR N N N N 516 TYR CA C N S 517 TYR C C N N 518 TYR O O N N 519 TYR CB C N N 520 TYR CG C Y N 521 TYR CD1 C Y N 522 TYR CD2 C Y N 523 TYR CE1 C Y N 524 TYR CE2 C Y N 525 TYR CZ C Y N 526 TYR OH O N N 527 TYR OXT O N N 528 TYR H H N N 529 TYR H2 H N N 530 TYR HA H N N 531 TYR HB2 H N N 532 TYR HB3 H N N 533 TYR HD1 H N N 534 TYR HD2 H N N 535 TYR HE1 H N N 536 TYR HE2 H N N 537 TYR HH H N N 538 TYR HXT H N N 539 VAL N N N N 540 VAL CA C N S 541 VAL C C N N 542 VAL O O N N 543 VAL CB C N N 544 VAL CG1 C N N 545 VAL CG2 C N N 546 VAL OXT O N N 547 VAL H H N N 548 VAL H2 H N N 549 VAL HA H N N 550 VAL HB H N N 551 VAL HG11 H N N 552 VAL HG12 H N N 553 VAL HG13 H N N 554 VAL HG21 H N N 555 VAL HG22 H N N 556 VAL HG23 H N N 557 VAL HXT H N N 558 XG4 N1 N N N 559 XG4 C2 C N N 560 XG4 N2 N N N 561 XG4 N3 N N N 562 XG4 C4 C Y N 563 XG4 C5 C Y N 564 XG4 C6 C N N 565 XG4 O6 O N N 566 XG4 N7 N Y N 567 XG4 C8 C Y N 568 XG4 N9 N Y N 569 XG4 PA P N N 570 XG4 PB P N N 571 XG4 PG P N N 572 XG4 "C1'" C N R 573 XG4 O1A O N N 574 XG4 O1B O N N 575 XG4 O1G O N N 576 XG4 "C2'" C N N 577 XG4 O2A O N N 578 XG4 O2B O N N 579 XG4 O2G O N N 580 XG4 "C3'" C N S 581 XG4 "O3'" O N N 582 XG4 N3A N N N 583 XG4 O3B O N N 584 XG4 O3G O N N 585 XG4 "C4'" C N R 586 XG4 "O4'" O N N 587 XG4 "C5'" C N N 588 XG4 "O5'" O N N 589 XG4 HN1 H N N 590 XG4 HN2 H N N 591 XG4 HN2A H N N 592 XG4 H8 H N N 593 XG4 "H1'" H N N 594 XG4 "H2'" H N N 595 XG4 "H2'A" H N N 596 XG4 HO2A H N N 597 XG4 HO2B H N N 598 XG4 HO2G H N N 599 XG4 "H3'" H N N 600 XG4 "HO3'" H N N 601 XG4 HN3A H N N 602 XG4 HO3G H N N 603 XG4 "H4'" H N N 604 XG4 "H5'" H N N 605 XG4 "H5'A" H N N 606 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A38 O3P P sing N N 1 A38 O3P H3P sing N N 2 A38 P O1P doub N N 3 A38 P O2P sing N N 4 A38 P "O5'" sing N N 5 A38 O2P H2P sing N N 6 A38 "O5'" "C5'" sing N N 7 A38 "C5'" "C4'" sing N N 8 A38 "C5'" "H5'1" sing N N 9 A38 "C5'" "H5'2" sing N N 10 A38 "C4'" "O4'" sing N N 11 A38 "C4'" "C3'" sing N N 12 A38 "C4'" "H4'" sing N N 13 A38 "O4'" "C1'" sing N N 14 A38 "C3'" "O3'" sing N N 15 A38 "C3'" "C2'" sing N N 16 A38 "C3'" "H3'" sing N N 17 A38 "O3'" HA sing N N 18 A38 "C2'" "C1'" sing N N 19 A38 "C2'" "H2'1" sing N N 20 A38 "C2'" "H2'2" sing N N 21 A38 "C1'" N9 sing N N 22 A38 "C1'" "H1'" sing N N 23 A38 N9 C8 sing N N 24 A38 N9 C4 sing N N 25 A38 C8 N7 sing N N 26 A38 C8 O doub N N 27 A38 N7 C5 sing N N 28 A38 N7 H7 sing N N 29 A38 C5 C6 doub Y N 30 A38 C5 C4 sing Y N 31 A38 C6 N6 sing N N 32 A38 C6 N1 sing Y N 33 A38 N6 H6N1 sing N N 34 A38 N6 H6N2 sing N N 35 A38 N1 C2 doub Y N 36 A38 C2 N3 sing Y N 37 A38 C2 H2 sing N N 38 A38 N3 C4 doub Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 DA OP3 P sing N N 122 DA OP3 HOP3 sing N N 123 DA P OP1 doub N N 124 DA P OP2 sing N N 125 DA P "O5'" sing N N 126 DA OP2 HOP2 sing N N 127 DA "O5'" "C5'" sing N N 128 DA "C5'" "C4'" sing N N 129 DA "C5'" "H5'" sing N N 130 DA "C5'" "H5''" sing N N 131 DA "C4'" "O4'" sing N N 132 DA "C4'" "C3'" sing N N 133 DA "C4'" "H4'" sing N N 134 DA "O4'" "C1'" sing N N 135 DA "C3'" "O3'" sing N N 136 DA "C3'" "C2'" sing N N 137 DA "C3'" "H3'" sing N N 138 DA "O3'" "HO3'" sing N N 139 DA "C2'" "C1'" sing N N 140 DA "C2'" "H2'" sing N N 141 DA "C2'" "H2''" sing N N 142 DA "C1'" N9 sing N N 143 DA "C1'" "H1'" sing N N 144 DA N9 C8 sing Y N 145 DA N9 C4 sing Y N 146 DA C8 N7 doub Y N 147 DA C8 H8 sing N N 148 DA N7 C5 sing Y N 149 DA C5 C6 sing Y N 150 DA C5 C4 doub Y N 151 DA C6 N6 sing N N 152 DA C6 N1 doub Y N 153 DA N6 H61 sing N N 154 DA N6 H62 sing N N 155 DA N1 C2 sing Y N 156 DA C2 N3 doub Y N 157 DA C2 H2 sing N N 158 DA N3 C4 sing Y N 159 DC OP3 P sing N N 160 DC OP3 HOP3 sing N N 161 DC P OP1 doub N N 162 DC P OP2 sing N N 163 DC P "O5'" sing N N 164 DC OP2 HOP2 sing N N 165 DC "O5'" "C5'" sing N N 166 DC "C5'" "C4'" sing N N 167 DC "C5'" "H5'" sing N N 168 DC "C5'" "H5''" sing N N 169 DC "C4'" "O4'" sing N N 170 DC "C4'" "C3'" sing N N 171 DC "C4'" "H4'" sing N N 172 DC "O4'" "C1'" sing N N 173 DC "C3'" "O3'" sing N N 174 DC "C3'" "C2'" sing N N 175 DC "C3'" "H3'" sing N N 176 DC "O3'" "HO3'" sing N N 177 DC "C2'" "C1'" sing N N 178 DC "C2'" "H2'" sing N N 179 DC "C2'" "H2''" sing N N 180 DC "C1'" N1 sing N N 181 DC "C1'" "H1'" sing N N 182 DC N1 C2 sing N N 183 DC N1 C6 sing N N 184 DC C2 O2 doub N N 185 DC C2 N3 sing N N 186 DC N3 C4 doub N N 187 DC C4 N4 sing N N 188 DC C4 C5 sing N N 189 DC N4 H41 sing N N 190 DC N4 H42 sing N N 191 DC C5 C6 doub N N 192 DC C5 H5 sing N N 193 DC C6 H6 sing N N 194 DG OP3 P sing N N 195 DG OP3 HOP3 sing N N 196 DG P OP1 doub N N 197 DG P OP2 sing N N 198 DG P "O5'" sing N N 199 DG OP2 HOP2 sing N N 200 DG "O5'" "C5'" sing N N 201 DG "C5'" "C4'" sing N N 202 DG "C5'" "H5'" sing N N 203 DG "C5'" "H5''" sing N N 204 DG "C4'" "O4'" sing N N 205 DG "C4'" "C3'" sing N N 206 DG "C4'" "H4'" sing N N 207 DG "O4'" "C1'" sing N N 208 DG "C3'" "O3'" sing N N 209 DG "C3'" "C2'" sing N N 210 DG "C3'" "H3'" sing N N 211 DG "O3'" "HO3'" sing N N 212 DG "C2'" "C1'" sing N N 213 DG "C2'" "H2'" sing N N 214 DG "C2'" "H2''" sing N N 215 DG "C1'" N9 sing N N 216 DG "C1'" "H1'" sing N N 217 DG N9 C8 sing Y N 218 DG N9 C4 sing Y N 219 DG C8 N7 doub Y N 220 DG C8 H8 sing N N 221 DG N7 C5 sing Y N 222 DG C5 C6 sing N N 223 DG C5 C4 doub Y N 224 DG C6 O6 doub N N 225 DG C6 N1 sing N N 226 DG N1 C2 sing N N 227 DG N1 H1 sing N N 228 DG C2 N2 sing N N 229 DG C2 N3 doub N N 230 DG N2 H21 sing N N 231 DG N2 H22 sing N N 232 DG N3 C4 sing N N 233 DT OP3 P sing N N 234 DT OP3 HOP3 sing N N 235 DT P OP1 doub N N 236 DT P OP2 sing N N 237 DT P "O5'" sing N N 238 DT OP2 HOP2 sing N N 239 DT "O5'" "C5'" sing N N 240 DT "C5'" "C4'" sing N N 241 DT "C5'" "H5'" sing N N 242 DT "C5'" "H5''" sing N N 243 DT "C4'" "O4'" sing N N 244 DT "C4'" "C3'" sing N N 245 DT "C4'" "H4'" sing N N 246 DT "O4'" "C1'" sing N N 247 DT "C3'" "O3'" sing N N 248 DT "C3'" "C2'" sing N N 249 DT "C3'" "H3'" sing N N 250 DT "O3'" "HO3'" sing N N 251 DT "C2'" "C1'" sing N N 252 DT "C2'" "H2'" sing N N 253 DT "C2'" "H2''" sing N N 254 DT "C1'" N1 sing N N 255 DT "C1'" "H1'" sing N N 256 DT N1 C2 sing N N 257 DT N1 C6 sing N N 258 DT C2 O2 doub N N 259 DT C2 N3 sing N N 260 DT N3 C4 sing N N 261 DT N3 H3 sing N N 262 DT C4 O4 doub N N 263 DT C4 C5 sing N N 264 DT C5 C7 sing N N 265 DT C5 C6 doub N N 266 DT C7 H71 sing N N 267 DT C7 H72 sing N N 268 DT C7 H73 sing N N 269 DT C6 H6 sing N N 270 GLN N CA sing N N 271 GLN N H sing N N 272 GLN N H2 sing N N 273 GLN CA C sing N N 274 GLN CA CB sing N N 275 GLN CA HA sing N N 276 GLN C O doub N N 277 GLN C OXT sing N N 278 GLN CB CG sing N N 279 GLN CB HB2 sing N N 280 GLN CB HB3 sing N N 281 GLN CG CD sing N N 282 GLN CG HG2 sing N N 283 GLN CG HG3 sing N N 284 GLN CD OE1 doub N N 285 GLN CD NE2 sing N N 286 GLN NE2 HE21 sing N N 287 GLN NE2 HE22 sing N N 288 GLN OXT HXT sing N N 289 GLU N CA sing N N 290 GLU N H sing N N 291 GLU N H2 sing N N 292 GLU CA C sing N N 293 GLU CA CB sing N N 294 GLU CA HA sing N N 295 GLU C O doub N N 296 GLU C OXT sing N N 297 GLU CB CG sing N N 298 GLU CB HB2 sing N N 299 GLU CB HB3 sing N N 300 GLU CG CD sing N N 301 GLU CG HG2 sing N N 302 GLU CG HG3 sing N N 303 GLU CD OE1 doub N N 304 GLU CD OE2 sing N N 305 GLU OE2 HE2 sing N N 306 GLU OXT HXT sing N N 307 GLY N CA sing N N 308 GLY N H sing N N 309 GLY N H2 sing N N 310 GLY CA C sing N N 311 GLY CA HA2 sing N N 312 GLY CA HA3 sing N N 313 GLY C O doub N N 314 GLY C OXT sing N N 315 GLY OXT HXT sing N N 316 GOL C1 O1 sing N N 317 GOL C1 C2 sing N N 318 GOL C1 H11 sing N N 319 GOL C1 H12 sing N N 320 GOL O1 HO1 sing N N 321 GOL C2 O2 sing N N 322 GOL C2 C3 sing N N 323 GOL C2 H2 sing N N 324 GOL O2 HO2 sing N N 325 GOL C3 O3 sing N N 326 GOL C3 H31 sing N N 327 GOL C3 H32 sing N N 328 GOL O3 HO3 sing N N 329 HIS N CA sing N N 330 HIS N H sing N N 331 HIS N H2 sing N N 332 HIS CA C sing N N 333 HIS CA CB sing N N 334 HIS CA HA sing N N 335 HIS C O doub N N 336 HIS C OXT sing N N 337 HIS CB CG sing N N 338 HIS CB HB2 sing N N 339 HIS CB HB3 sing N N 340 HIS CG ND1 sing Y N 341 HIS CG CD2 doub Y N 342 HIS ND1 CE1 doub Y N 343 HIS ND1 HD1 sing N N 344 HIS CD2 NE2 sing Y N 345 HIS CD2 HD2 sing N N 346 HIS CE1 NE2 sing Y N 347 HIS CE1 HE1 sing N N 348 HIS NE2 HE2 sing N N 349 HIS OXT HXT sing N N 350 HOH O H1 sing N N 351 HOH O H2 sing N N 352 ILE N CA sing N N 353 ILE N H sing N N 354 ILE N H2 sing N N 355 ILE CA C sing N N 356 ILE CA CB sing N N 357 ILE CA HA sing N N 358 ILE C O doub N N 359 ILE C OXT sing N N 360 ILE CB CG1 sing N N 361 ILE CB CG2 sing N N 362 ILE CB HB sing N N 363 ILE CG1 CD1 sing N N 364 ILE CG1 HG12 sing N N 365 ILE CG1 HG13 sing N N 366 ILE CG2 HG21 sing N N 367 ILE CG2 HG22 sing N N 368 ILE CG2 HG23 sing N N 369 ILE CD1 HD11 sing N N 370 ILE CD1 HD12 sing N N 371 ILE CD1 HD13 sing N N 372 ILE OXT HXT sing N N 373 LEU N CA sing N N 374 LEU N H sing N N 375 LEU N H2 sing N N 376 LEU CA C sing N N 377 LEU CA CB sing N N 378 LEU CA HA sing N N 379 LEU C O doub N N 380 LEU C OXT sing N N 381 LEU CB CG sing N N 382 LEU CB HB2 sing N N 383 LEU CB HB3 sing N N 384 LEU CG CD1 sing N N 385 LEU CG CD2 sing N N 386 LEU CG HG sing N N 387 LEU CD1 HD11 sing N N 388 LEU CD1 HD12 sing N N 389 LEU CD1 HD13 sing N N 390 LEU CD2 HD21 sing N N 391 LEU CD2 HD22 sing N N 392 LEU CD2 HD23 sing N N 393 LEU OXT HXT sing N N 394 LYS N CA sing N N 395 LYS N H sing N N 396 LYS N H2 sing N N 397 LYS CA C sing N N 398 LYS CA CB sing N N 399 LYS CA HA sing N N 400 LYS C O doub N N 401 LYS C OXT sing N N 402 LYS CB CG sing N N 403 LYS CB HB2 sing N N 404 LYS CB HB3 sing N N 405 LYS CG CD sing N N 406 LYS CG HG2 sing N N 407 LYS CG HG3 sing N N 408 LYS CD CE sing N N 409 LYS CD HD2 sing N N 410 LYS CD HD3 sing N N 411 LYS CE NZ sing N N 412 LYS CE HE2 sing N N 413 LYS CE HE3 sing N N 414 LYS NZ HZ1 sing N N 415 LYS NZ HZ2 sing N N 416 LYS NZ HZ3 sing N N 417 LYS OXT HXT sing N N 418 MET N CA sing N N 419 MET N H sing N N 420 MET N H2 sing N N 421 MET CA C sing N N 422 MET CA CB sing N N 423 MET CA HA sing N N 424 MET C O doub N N 425 MET C OXT sing N N 426 MET CB CG sing N N 427 MET CB HB2 sing N N 428 MET CB HB3 sing N N 429 MET CG SD sing N N 430 MET CG HG2 sing N N 431 MET CG HG3 sing N N 432 MET SD CE sing N N 433 MET CE HE1 sing N N 434 MET CE HE2 sing N N 435 MET CE HE3 sing N N 436 MET OXT HXT sing N N 437 PHE N CA sing N N 438 PHE N H sing N N 439 PHE N H2 sing N N 440 PHE CA C sing N N 441 PHE CA CB sing N N 442 PHE CA HA sing N N 443 PHE C O doub N N 444 PHE C OXT sing N N 445 PHE CB CG sing N N 446 PHE CB HB2 sing N N 447 PHE CB HB3 sing N N 448 PHE CG CD1 doub Y N 449 PHE CG CD2 sing Y N 450 PHE CD1 CE1 sing Y N 451 PHE CD1 HD1 sing N N 452 PHE CD2 CE2 doub Y N 453 PHE CD2 HD2 sing N N 454 PHE CE1 CZ doub Y N 455 PHE CE1 HE1 sing N N 456 PHE CE2 CZ sing Y N 457 PHE CE2 HE2 sing N N 458 PHE CZ HZ sing N N 459 PHE OXT HXT sing N N 460 PRO N CA sing N N 461 PRO N CD sing N N 462 PRO N H sing N N 463 PRO CA C sing N N 464 PRO CA CB sing N N 465 PRO CA HA sing N N 466 PRO C O doub N N 467 PRO C OXT sing N N 468 PRO CB CG sing N N 469 PRO CB HB2 sing N N 470 PRO CB HB3 sing N N 471 PRO CG CD sing N N 472 PRO CG HG2 sing N N 473 PRO CG HG3 sing N N 474 PRO CD HD2 sing N N 475 PRO CD HD3 sing N N 476 PRO OXT HXT sing N N 477 SER N CA sing N N 478 SER N H sing N N 479 SER N H2 sing N N 480 SER CA C sing N N 481 SER CA CB sing N N 482 SER CA HA sing N N 483 SER C O doub N N 484 SER C OXT sing N N 485 SER CB OG sing N N 486 SER CB HB2 sing N N 487 SER CB HB3 sing N N 488 SER OG HG sing N N 489 SER OXT HXT sing N N 490 THR N CA sing N N 491 THR N H sing N N 492 THR N H2 sing N N 493 THR CA C sing N N 494 THR CA CB sing N N 495 THR CA HA sing N N 496 THR C O doub N N 497 THR C OXT sing N N 498 THR CB OG1 sing N N 499 THR CB CG2 sing N N 500 THR CB HB sing N N 501 THR OG1 HG1 sing N N 502 THR CG2 HG21 sing N N 503 THR CG2 HG22 sing N N 504 THR CG2 HG23 sing N N 505 THR OXT HXT sing N N 506 TYR N CA sing N N 507 TYR N H sing N N 508 TYR N H2 sing N N 509 TYR CA C sing N N 510 TYR CA CB sing N N 511 TYR CA HA sing N N 512 TYR C O doub N N 513 TYR C OXT sing N N 514 TYR CB CG sing N N 515 TYR CB HB2 sing N N 516 TYR CB HB3 sing N N 517 TYR CG CD1 doub Y N 518 TYR CG CD2 sing Y N 519 TYR CD1 CE1 sing Y N 520 TYR CD1 HD1 sing N N 521 TYR CD2 CE2 doub Y N 522 TYR CD2 HD2 sing N N 523 TYR CE1 CZ doub Y N 524 TYR CE1 HE1 sing N N 525 TYR CE2 CZ sing Y N 526 TYR CE2 HE2 sing N N 527 TYR CZ OH sing N N 528 TYR OH HH sing N N 529 TYR OXT HXT sing N N 530 VAL N CA sing N N 531 VAL N H sing N N 532 VAL N H2 sing N N 533 VAL CA C sing N N 534 VAL CA CB sing N N 535 VAL CA HA sing N N 536 VAL C O doub N N 537 VAL C OXT sing N N 538 VAL CB CG1 sing N N 539 VAL CB CG2 sing N N 540 VAL CB HB sing N N 541 VAL CG1 HG11 sing N N 542 VAL CG1 HG12 sing N N 543 VAL CG1 HG13 sing N N 544 VAL CG2 HG21 sing N N 545 VAL CG2 HG22 sing N N 546 VAL CG2 HG23 sing N N 547 VAL OXT HXT sing N N 548 XG4 C2 N1 sing N N 549 XG4 N1 C6 sing N N 550 XG4 N1 HN1 sing N N 551 XG4 N3 C2 doub N N 552 XG4 N2 C2 sing N N 553 XG4 N2 HN2 sing N N 554 XG4 N2 HN2A sing N N 555 XG4 N3 C4 sing N N 556 XG4 N9 C4 sing Y N 557 XG4 C4 C5 doub Y N 558 XG4 C5 N7 sing Y N 559 XG4 C5 C6 sing N N 560 XG4 C6 O6 doub N N 561 XG4 C8 N7 doub Y N 562 XG4 N9 C8 sing Y N 563 XG4 C8 H8 sing N N 564 XG4 "C1'" N9 sing N N 565 XG4 "O5'" PA sing N N 566 XG4 O1A PA doub N N 567 XG4 PA O2A sing N N 568 XG4 PA N3A sing N N 569 XG4 O1B PB doub N N 570 XG4 N3A PB sing N N 571 XG4 PB O2B sing N N 572 XG4 PB O3B sing N N 573 XG4 O1G PG doub N N 574 XG4 PG O3B sing N N 575 XG4 PG O2G sing N N 576 XG4 PG O3G sing N N 577 XG4 "O4'" "C1'" sing N N 578 XG4 "C1'" "C2'" sing N N 579 XG4 "C1'" "H1'" sing N N 580 XG4 "C2'" "C3'" sing N N 581 XG4 "C2'" "H2'" sing N N 582 XG4 "C2'" "H2'A" sing N N 583 XG4 O2A HO2A sing N N 584 XG4 O2B HO2B sing N N 585 XG4 O2G HO2G sing N N 586 XG4 "C4'" "C3'" sing N N 587 XG4 "C3'" "O3'" sing N N 588 XG4 "C3'" "H3'" sing N N 589 XG4 "O3'" "HO3'" sing N N 590 XG4 N3A HN3A sing N N 591 XG4 O3G HO3G sing N N 592 XG4 "O4'" "C4'" sing N N 593 XG4 "C4'" "C5'" sing N N 594 XG4 "C4'" "H4'" sing N N 595 XG4 "C5'" "O5'" sing N N 596 XG4 "C5'" "H5'" sing N N 597 XG4 "C5'" "H5'A" sing N N 598 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6VG6 'double helix' 6VG6 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 18 1_555 -0.411 -0.328 -0.099 4.132 -17.205 -2.653 1 P_DG1:DC18_T P 1 ? T 18 ? 19 1 1 A DG 2 1_555 B DC 17 1_555 -0.235 0.155 0.618 24.720 -7.481 6.732 2 P_DG2:DC17_T P 2 ? T 17 ? 19 1 1 A DG 3 1_555 B DC 16 1_555 -0.420 -0.269 0.552 0.090 4.916 -14.781 3 P_DG3:DC16_T P 3 ? T 16 ? 19 1 1 A DG 4 1_555 B DC 15 1_555 0.312 -0.251 0.260 0.126 -3.729 -6.745 4 P_DG4:DC15_T P 4 ? T 15 ? 19 1 1 A DG 5 1_555 B DC 14 1_555 0.520 0.094 0.042 -8.234 -6.361 -13.274 5 P_DG5:DC14_T P 5 ? T 14 ? 19 1 1 A DA 6 1_555 B DT 13 1_555 -1.025 0.438 0.402 -12.643 -10.421 -11.968 6 P_DA6:DT13_T P 6 ? T 13 ? ? ? 1 A DA 7 1_555 B DT 12 1_555 0.103 0.149 1.074 -15.612 -8.856 -3.251 7 P_DA7:DT12_T P 7 ? T 12 ? 20 1 1 A DG 8 1_555 B DC 11 1_555 -0.139 0.249 0.698 6.138 -21.129 7.769 8 P_DG8:DC11_T P 8 ? T 11 ? 19 1 1 A DG 9 1_555 B DC 10 1_555 0.309 -0.104 0.417 -0.796 -27.231 2.793 9 P_DG9:DC10_T P 9 ? T 10 ? 19 1 1 A DA 10 1_555 B DT 9 1_555 1.244 -0.025 0.527 3.477 -20.194 7.191 10 P_DA10:DT9_T P 10 ? T 9 ? 20 1 1 A DT 11 1_555 B DA 8 1_555 -0.714 0.302 0.267 9.064 -0.570 9.020 11 P_DT11:DA8_T P 11 ? T 8 ? 20 1 1 A DT 12 1_555 B DA 7 1_555 -0.619 0.128 -0.871 36.510 -7.762 8.850 12 P_DT12:DA7_T P 12 ? T 7 ? 20 1 1 A DC 13 1_555 B DG 6 1_555 0.022 -0.193 -1.042 32.699 -35.050 29.012 13 P_DC13:DG6_T P 13 ? T 6 ? 19 1 1 D DG 1 1_555 E DC 18 1_555 -0.437 -0.338 -0.045 10.043 -21.154 -2.737 14 B_DG1:DC18_C B 1 ? C 18 ? 19 1 1 D DG 2 1_555 E DC 17 1_555 -0.174 0.249 0.745 24.850 -7.014 7.366 15 B_DG2:DC17_C B 2 ? C 17 ? 19 1 1 D DG 3 1_555 E DC 16 1_555 -0.443 -0.192 0.290 1.449 4.676 -12.088 16 B_DG3:DC16_C B 3 ? C 16 ? 19 1 1 D DG 4 1_555 E DC 15 1_555 0.813 0.591 0.257 -10.259 -18.589 4.366 17 B_DG4:DC15_C B 4 ? C 15 ? ? 1 1 D DG 5 1_555 E DC 14 1_555 0.834 0.710 -0.227 -5.155 -5.409 -2.956 18 B_DG5:DC14_C B 5 ? C 14 ? 19 1 1 D DA 7 1_555 E DT 12 1_555 0.706 -0.107 1.041 -5.124 -16.835 4.864 19 B_DA7:DT12_C B 7 ? C 12 ? 20 1 1 D DG 8 1_555 E DC 11 1_555 -0.258 0.122 0.867 11.356 -11.720 8.063 20 B_DG8:DC11_C B 8 ? C 11 ? 19 1 1 D DG 9 1_555 E DC 10 1_555 0.177 -0.058 0.109 -2.449 -32.904 5.608 21 B_DG9:DC10_C B 9 ? C 10 ? 19 1 1 D DA 10 1_555 E DT 9 1_555 0.815 0.226 0.221 -0.073 -22.715 11.912 22 B_DA10:DT9_C B 10 ? C 9 ? 20 1 1 D DT 12 1_555 E DA 7 1_555 -0.722 0.012 -1.085 31.720 -16.749 10.792 23 B_DT12:DA7_C B 12 ? C 7 ? 20 1 1 D DC 13 1_555 E DG 6 1_555 -0.915 0.419 -0.118 15.612 -28.056 22.511 24 B_DC13:DG6_C B 13 ? C 6 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 18 1_555 A DG 2 1_555 B DC 17 1_555 1.351 -0.459 3.122 -4.157 -4.885 31.559 -0.009 -3.134 2.960 -8.867 7.546 32.188 1 PP_DG1DG2:DC17DC18_TT P 1 ? T 18 ? P 2 ? T 17 ? 1 A DG 2 1_555 B DC 17 1_555 A DG 3 1_555 B DC 16 1_555 -1.619 -1.247 4.071 -7.102 5.281 36.919 -2.774 1.342 4.092 8.195 11.021 37.929 2 PP_DG2DG3:DC16DC17_TT P 2 ? T 17 ? P 3 ? T 16 ? 1 A DG 3 1_555 B DC 16 1_555 A DG 4 1_555 B DC 15 1_555 0.922 -0.875 3.339 2.929 3.066 38.367 -1.710 -1.026 3.321 4.648 -4.441 38.592 3 PP_DG3DG4:DC15DC16_TT P 3 ? T 16 ? P 4 ? T 15 ? 1 A DG 4 1_555 B DC 15 1_555 A DG 5 1_555 B DC 14 1_555 -0.710 -0.668 3.522 -1.029 3.225 30.335 -1.955 1.131 3.456 6.138 1.959 30.519 4 PP_DG4DG5:DC14DC15_TT P 4 ? T 15 ? P 5 ? T 14 ? 1 A DG 5 1_555 B DC 14 1_555 A DA 6 1_555 B DT 13 1_555 -0.508 -0.379 3.336 -3.232 6.085 31.342 -1.799 0.329 3.241 11.097 5.893 32.072 5 PP_DG5DA6:DT13DC14_TT P 5 ? T 14 ? P 6 ? T 13 ? 1 A DA 6 1_555 B DT 13 1_555 A DA 7 1_555 B DT 12 1_555 -0.426 -0.547 3.310 -6.234 3.631 42.663 -1.102 -0.040 3.283 4.949 8.495 43.241 6 PP_DA6DA7:DT12DT13_TT P 6 ? T 13 ? P 7 ? T 12 ? 1 A DA 7 1_555 B DT 12 1_555 A DG 8 1_555 B DC 11 1_555 -0.027 -0.402 3.179 7.070 -12.551 38.839 0.770 0.792 3.108 -18.133 -10.214 41.328 7 PP_DA7DG8:DC11DT12_TT P 7 ? T 12 ? P 8 ? T 11 ? 1 A DG 8 1_555 B DC 11 1_555 A DG 9 1_555 B DC 10 1_555 -0.106 -0.714 3.448 3.095 4.173 35.184 -1.803 0.644 3.323 6.857 -5.085 35.554 8 PP_DG8DG9:DC10DC11_TT P 8 ? T 11 ? P 9 ? T 10 ? 1 A DG 9 1_555 B DC 10 1_555 A DA 10 1_555 B DT 9 1_555 0.275 0.061 3.186 0.118 6.389 35.174 -0.800 -0.431 3.149 10.465 -0.194 35.732 9 PP_DG9DA10:DT9DC10_TT P 9 ? T 10 ? P 10 ? T 9 ? 1 A DA 10 1_555 B DT 9 1_555 A DT 11 1_555 B DA 8 1_555 0.440 -0.803 3.166 -0.132 -1.175 26.153 -1.462 -1.006 3.196 -2.594 0.292 26.180 10 PP_DA10DT11:DA8DT9_TT P 10 ? T 9 ? P 11 ? T 8 ? 1 A DT 11 1_555 B DA 8 1_555 A DT 12 1_555 B DA 7 1_555 0.562 -0.152 2.564 9.907 7.187 21.598 -2.128 1.137 2.416 17.487 -24.106 24.789 11 PP_DT11DT12:DA7DA8_TT P 11 ? T 8 ? P 12 ? T 7 ? 1 A DT 12 1_555 B DA 7 1_555 A DC 13 1_555 B DG 6 1_555 0.790 0.502 3.193 8.201 13.756 33.453 -1.132 -0.099 3.249 22.375 -13.339 36.990 12 PP_DT12DC13:DG6DA7_TT P 12 ? T 7 ? P 13 ? T 6 ? 1 D DG 1 1_555 E DC 18 1_555 D DG 2 1_555 E DC 17 1_555 1.417 -0.577 3.232 -5.059 -4.675 32.742 -0.254 -3.272 3.037 -8.180 8.852 33.439 13 BB_DG1DG2:DC17DC18_CC B 1 ? C 18 ? B 2 ? C 17 ? 1 D DG 2 1_555 E DC 17 1_555 D DG 3 1_555 E DC 16 1_555 -1.564 -1.196 4.175 -3.400 3.267 35.750 -2.527 1.908 4.179 5.292 5.509 36.050 14 BB_DG2DG3:DC16DC17_CC B 2 ? C 17 ? B 3 ? C 16 ? 1 D DG 3 1_555 E DC 16 1_555 D DG 4 1_555 E DC 15 1_555 1.325 -0.376 3.627 4.231 -0.219 44.509 -0.472 -1.306 3.733 -0.288 -5.571 44.700 15 BB_DG3DG4:DC15DC16_CC B 3 ? C 16 ? B 4 ? C 15 ? 1 D DG 4 1_555 E DC 15 1_555 D DG 5 1_555 E DC 14 1_555 -1.115 -0.531 3.082 4.119 10.317 30.143 -2.623 2.681 2.594 19.044 -7.604 32.080 16 BB_DG4DG5:DC14DC15_CC B 4 ? C 15 ? B 5 ? C 14 ? 1 D DG 5 1_555 E DC 14 1_555 D DA 7 1_555 E DT 12 1_555 -0.701 -0.611 6.565 -3.489 8.208 72.433 -1.050 0.362 6.498 6.920 2.941 72.905 17 BB_DG5DA7:DT12DC14_CC B 5 ? C 14 ? B 7 ? C 12 ? 1 D DA 7 1_555 E DT 12 1_555 D DG 8 1_555 E DC 11 1_555 0.145 -0.368 2.948 0.801 -6.930 34.310 0.341 -0.131 2.967 -11.598 -1.340 34.991 18 BB_DA7DG8:DC11DT12_CC B 7 ? C 12 ? B 8 ? C 11 ? 1 D DG 8 1_555 E DC 11 1_555 D DG 9 1_555 E DC 10 1_555 -0.082 -0.505 3.866 10.069 3.522 35.468 -1.352 1.720 3.644 5.625 -16.085 36.988 19 BB_DG8DG9:DC10DC11_CC B 8 ? C 11 ? B 9 ? C 10 ? 1 D DG 9 1_555 E DC 10 1_555 D DA 10 1_555 E DT 9 1_555 0.381 0.321 3.248 0.194 7.263 31.987 -0.687 -0.641 3.243 12.971 -0.347 32.780 20 BB_DG9DA10:DT9DC10_CC B 9 ? C 10 ? B 10 ? C 9 ? 1 D DA 10 1_555 E DT 9 1_555 D DT 12 1_555 E DA 7 1_555 0.354 -0.152 5.837 8.642 12.002 51.475 -1.530 0.587 5.661 13.504 -9.723 53.418 21 BB_DA10DT12:DA7DT9_CC B 10 ? C 9 ? B 12 ? C 7 ? 1 D DT 12 1_555 E DA 7 1_555 D DC 13 1_555 E DG 6 1_555 0.483 0.265 3.616 -5.179 14.945 32.405 -1.953 -1.608 3.307 25.007 8.666 35.966 22 BB_DT12DC13:DG6DA7_CC B 12 ? C 7 ? B 13 ? C 6 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine" XG4 5 'MAGNESIUM ION' MG 6 GLYCEROL GOL 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JX4 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.crystal_system monoclinic _space_group.name_H-M_alt 'P 1 21 1' _space_group.IT_number 4 _space_group.name_Hall 'P 2yb' _space_group.id 1 #