HEADER PROTEIN FIBRIL 09-JAN-20 6VH7 TITLE DOUBLET TAU FIBRIL FROM CORTICOBASAL DEGENERATION HUMAN BRAIN TISSUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICROTUBULE-ASSOCIATED PROTEIN TAU; COMPND 3 CHAIN: A, B, C, E, F, G; COMPND 4 SYNONYM: NEUROFIBRILLARY TANGLE PROTEIN,PAIRED HELICAL FILAMENT-TAU, COMPND 5 PHF-TAU; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPT, MAPTL, MTBT1, TAU; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS PATHOLOGICAL AMYLOID FIBRIL, CROSS-BETA FOLD, PARALLEL BETA-SHEETS, KEYWDS 2 PROTEIN FIBRIL EXPDTA ELECTRON MICROSCOPY AUTHOR T.ARAKHAMIA,C.E.LEE,Y.CARLOMAGNO,D.M.DUONG,S.R.KUNDINGER,K.WANG, AUTHOR 2 D.WILLIAMS,M.DETURE,D.W.DICKSON,C.N.COOK,N.T.SEYFRIED,L.PETRUCELLI, AUTHOR 3 A.W.P.FITZPATRICK REVDAT 2 06-MAR-24 6VH7 1 REMARK REVDAT 1 04-MAR-20 6VH7 0 JRNL AUTH T.ARAKHAMIA,C.E.LEE,Y.CARLOMAGNO,D.M.DUONG,S.R.KUNDINGER, JRNL AUTH 2 K.WANG,D.WILLIAMS,M.DETURE,D.W.DICKSON,C.N.COOK, JRNL AUTH 3 N.T.SEYFRIED,L.PETRUCELLI,A.W.P.FITZPATRICK JRNL TITL POSTTRANSLATIONAL MODIFICATIONS MEDIATE THE STRUCTURAL JRNL TITL 2 DIVERSITY OF TAUOPATHY STRAINS. JRNL REF CELL V. 180 633 2020 JRNL REFN ISSN 1097-4172 JRNL PMID 32032505 JRNL DOI 10.1016/J.CELL.2020.01.027 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.800 REMARK 3 NUMBER OF PARTICLES : 7549 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6VH7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000246345. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : DOUBLET TAU FIBRIL FROM REMARK 245 CORTICOBASAL DEGENERATION HUMAN REMARK 245 BRAIN TISSUE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : UNSPECIFIED REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 358 69.45 60.03 REMARK 500 ASP C 358 69.42 60.01 REMARK 500 ASP E 358 69.42 60.01 REMARK 500 ASP G 358 69.42 60.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-21200 RELATED DB: EMDB REMARK 900 DOUBLET TAU FIBRIL FROM CORTICOBASAL DEGENERATION HUMAN BRAIN TISSUE DBREF 6VH7 A 274 380 UNP P10636 TAU_HUMAN 216 322 DBREF 6VH7 B 274 380 UNP P10636 TAU_HUMAN 216 322 DBREF 6VH7 C 274 380 UNP P10636 TAU_HUMAN 216 322 DBREF 6VH7 E 274 380 UNP P10636 TAU_HUMAN 216 322 DBREF 6VH7 F 274 380 UNP P10636 TAU_HUMAN 216 322 DBREF 6VH7 G 274 380 UNP P10636 TAU_HUMAN 216 322 SEQRES 1 A 107 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 A 107 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 A 107 VAL PRO GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 A 107 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 A 107 GLY ASN ILE HIS HIS LYS PRO GLY GLY GLY GLN VAL GLU SEQRES 6 A 107 VAL LYS SER GLU LYS LEU ASP PHE LYS ASP ARG VAL GLN SEQRES 7 A 107 SER LYS ILE GLY SER LEU ASP ASN ILE THR HIS VAL PRO SEQRES 8 A 107 GLY GLY GLY ASN LYS LYS ILE GLU THR HIS LYS LEU THR SEQRES 9 A 107 PHE ARG GLU SEQRES 1 B 107 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 B 107 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 B 107 VAL PRO GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 B 107 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 B 107 GLY ASN ILE HIS HIS LYS PRO GLY GLY GLY GLN VAL GLU SEQRES 6 B 107 VAL LYS SER GLU LYS LEU ASP PHE LYS ASP ARG VAL GLN SEQRES 7 B 107 SER LYS ILE GLY SER LEU ASP ASN ILE THR HIS VAL PRO SEQRES 8 B 107 GLY GLY GLY ASN LYS LYS ILE GLU THR HIS LYS LEU THR SEQRES 9 B 107 PHE ARG GLU SEQRES 1 C 107 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 C 107 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 C 107 VAL PRO GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 C 107 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 C 107 GLY ASN ILE HIS HIS LYS PRO GLY GLY GLY GLN VAL GLU SEQRES 6 C 107 VAL LYS SER GLU LYS LEU ASP PHE LYS ASP ARG VAL GLN SEQRES 7 C 107 SER LYS ILE GLY SER LEU ASP ASN ILE THR HIS VAL PRO SEQRES 8 C 107 GLY GLY GLY ASN LYS LYS ILE GLU THR HIS LYS LEU THR SEQRES 9 C 107 PHE ARG GLU SEQRES 1 E 107 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 E 107 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 E 107 VAL PRO GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 E 107 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 E 107 GLY ASN ILE HIS HIS LYS PRO GLY GLY GLY GLN VAL GLU SEQRES 6 E 107 VAL LYS SER GLU LYS LEU ASP PHE LYS ASP ARG VAL GLN SEQRES 7 E 107 SER LYS ILE GLY SER LEU ASP ASN ILE THR HIS VAL PRO SEQRES 8 E 107 GLY GLY GLY ASN LYS LYS ILE GLU THR HIS LYS LEU THR SEQRES 9 E 107 PHE ARG GLU SEQRES 1 F 107 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 F 107 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 F 107 VAL PRO GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 F 107 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 F 107 GLY ASN ILE HIS HIS LYS PRO GLY GLY GLY GLN VAL GLU SEQRES 6 F 107 VAL LYS SER GLU LYS LEU ASP PHE LYS ASP ARG VAL GLN SEQRES 7 F 107 SER LYS ILE GLY SER LEU ASP ASN ILE THR HIS VAL PRO SEQRES 8 F 107 GLY GLY GLY ASN LYS LYS ILE GLU THR HIS LYS LEU THR SEQRES 9 F 107 PHE ARG GLU SEQRES 1 G 107 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 G 107 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 G 107 VAL PRO GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 G 107 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 G 107 GLY ASN ILE HIS HIS LYS PRO GLY GLY GLY GLN VAL GLU SEQRES 6 G 107 VAL LYS SER GLU LYS LEU ASP PHE LYS ASP ARG VAL GLN SEQRES 7 G 107 SER LYS ILE GLY SER LEU ASP ASN ILE THR HIS VAL PRO SEQRES 8 G 107 GLY GLY GLY ASN LYS LYS ILE GLU THR HIS LYS LEU THR SEQRES 9 G 107 PHE ARG GLU SHEET 1 AA1 3 VAL A 275 LEU A 282 0 SHEET 2 AA1 3 VAL B 275 LEU B 282 1 O LYS B 281 N LEU A 282 SHEET 3 AA1 3 VAL C 275 LEU C 282 1 O LYS C 281 N LEU B 282 SHEET 1 AA2 3 SER A 285 HIS A 299 0 SHEET 2 AA2 3 SER B 285 HIS B 299 1 O ILE B 297 N ASN A 296 SHEET 3 AA2 3 SER C 285 HIS C 299 1 O CYS C 291 N GLY B 292 SHEET 1 AA3 3 GLY A 303 TYR A 310 0 SHEET 2 AA3 3 GLY B 303 TYR B 310 1 O GLN B 307 N VAL A 306 SHEET 3 AA3 3 GLY C 303 TYR C 310 1 O GLN C 307 N VAL B 306 SHEET 1 AA4 3 VAL A 313 LYS A 321 0 SHEET 2 AA4 3 VAL B 313 LYS B 321 1 O LYS B 317 N SER A 316 SHEET 3 AA4 3 VAL C 313 LYS C 321 1 O LYS C 317 N SER B 316 SHEET 1 AA5 3 ASN A 327 HIS A 330 0 SHEET 2 AA5 3 ASN B 327 HIS B 330 1 O HIS B 329 N ILE A 328 SHEET 3 AA5 3 ASN C 327 HIS C 330 1 O HIS C 329 N ILE B 328 SHEET 1 AA6 3 GLN A 336 PHE A 346 0 SHEET 2 AA6 3 GLN B 336 PHE B 346 1 O ASP B 345 N PHE A 346 SHEET 3 AA6 3 GLN C 336 PHE C 346 1 O LYS C 340 N SER B 341 SHEET 1 AA7 3 ARG A 349 HIS A 362 0 SHEET 2 AA7 3 ARG B 349 HIS B 362 1 O LYS B 353 N SER A 352 SHEET 3 AA7 3 ARG C 349 HIS C 362 1 O LYS C 353 N ILE B 354 SHEET 1 AA8 3 LYS A 369 ARG A 379 0 SHEET 2 AA8 3 LYS B 369 ARG B 379 1 O ARG B 379 N PHE A 378 SHEET 3 AA8 3 LYS C 369 ARG C 379 1 O ARG C 379 N PHE B 378 SHEET 1 AA9 3 VAL E 275 LEU E 282 0 SHEET 2 AA9 3 VAL F 275 LEU F 282 1 O LYS F 281 N LEU E 282 SHEET 3 AA9 3 VAL G 275 LEU G 282 1 O LYS G 281 N LEU F 282 SHEET 1 AB1 3 SER E 285 HIS E 299 0 SHEET 2 AB1 3 SER F 285 HIS F 299 1 O ILE F 297 N ASN E 296 SHEET 3 AB1 3 SER G 285 HIS G 299 1 O CYS G 291 N GLY F 292 SHEET 1 AB2 3 GLY E 303 TYR E 310 0 SHEET 2 AB2 3 GLY F 303 TYR F 310 1 O GLN F 307 N VAL E 306 SHEET 3 AB2 3 GLY G 303 TYR G 310 1 O GLN G 307 N VAL F 306 SHEET 1 AB3 3 VAL E 313 LYS E 321 0 SHEET 2 AB3 3 VAL F 313 LYS F 321 1 O LYS F 317 N SER E 316 SHEET 3 AB3 3 VAL G 313 LYS G 321 1 O LYS G 317 N SER F 316 SHEET 1 AB4 3 ASN E 327 HIS E 330 0 SHEET 2 AB4 3 ASN F 327 HIS F 330 1 O HIS F 329 N ILE E 328 SHEET 3 AB4 3 ASN G 327 HIS G 330 1 O HIS G 329 N ILE F 328 SHEET 1 AB5 3 GLN E 336 PHE E 346 0 SHEET 2 AB5 3 GLN F 336 PHE F 346 1 O ASP F 345 N PHE E 346 SHEET 3 AB5 3 GLN G 336 PHE G 346 1 O LYS G 340 N SER F 341 SHEET 1 AB6 3 ARG E 349 HIS E 362 0 SHEET 2 AB6 3 ARG F 349 HIS F 362 1 O LYS F 353 N SER E 352 SHEET 3 AB6 3 ARG G 349 HIS G 362 1 O LYS G 353 N ILE F 354 SHEET 1 AB7 3 LYS E 369 ARG E 379 0 SHEET 2 AB7 3 LYS F 369 ARG F 379 1 O ARG F 379 N PHE E 378 SHEET 3 AB7 3 LYS G 369 ARG G 379 1 O ARG G 379 N PHE F 378 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000