HEADER PROTEIN TRANSPORT 10-JAN-20 6VHR TITLE STRUCTURE OF PE5-PPE4-ESPG3 COMPLEX FROM THE TYPE VII (ESX-3) TITLE 2 SECRETION SYSTEM, SPACE GROUP I422 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PE FAMILY IMMUNOMODULATOR PE5; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PPE FAMILY PROTEIN PPE4; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: FRAGMENT RESIDUES 1-178; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ESX-3 SECRETION-ASSOCIATED PROTEIN ESPG3; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: FRAGMENT RESIDUES 5-290 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 ATCC: 25618; SOURCE 7 GENE: PE5, RV0285, LH57_01560; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PRSF-NT; SOURCE 14 MOL_ID: 2; SOURCE 15 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 16 H37RV); SOURCE 17 ORGANISM_TAXID: 83332; SOURCE 18 STRAIN: ATCC 25618 / H37RV; SOURCE 19 ATCC: 25618; SOURCE 20 GENE: PPE4, RV0286; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 22 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 23 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 24 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 25 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 26 EXPRESSION_SYSTEM_PLASMID: PRSF-NT; SOURCE 27 MOL_ID: 3; SOURCE 28 ORGANISM_SCIENTIFIC: MYCOBACTERIUM MARINUM (STRAIN ATCC BAA-535 / SOURCE 29 M); SOURCE 30 ORGANISM_TAXID: 216594; SOURCE 31 STRAIN: ATCC BAA-535 / M; SOURCE 32 ATCC: BAA-535; SOURCE 33 GENE: MMAR_0548; SOURCE 34 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 35 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 36 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 37 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 38 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 39 EXPRESSION_SYSTEM_PLASMID: PCDF-21D KEYWDS CHAPERONE, PROTEIN SECRETION, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Z.A.WILLIAMSON,K.V.KOROTKOV REVDAT 3 11-OCT-23 6VHR 1 REMARK REVDAT 2 23-SEP-20 6VHR 1 JRNL REVDAT 1 29-JAN-20 6VHR 0 JRNL AUTH Z.A.WILLIAMSON,C.T.CHATON,W.A.CIOCCA,N.KOROTKOVA, JRNL AUTH 2 K.V.KOROTKOV JRNL TITL PE5-PPE4-ESPG3HETEROTRIMER STRUCTURE FROM MYCOBACTERIAL JRNL TITL 2 ESX-3 SECRETION SYSTEM GIVES INSIGHT INTO COGNATE SUBSTRATE JRNL TITL 3 RECOGNITION BY ESX SYSTEMS. JRNL REF J.BIOL.CHEM. V. 295 12706 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32675282 JRNL DOI 10.1074/JBC.RA120.012698 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.300 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 19335 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.7270 - 7.5333 1.00 2875 178 0.1820 0.2141 REMARK 3 2 7.5333 - 5.9885 1.00 2899 145 0.2503 0.3122 REMARK 3 3 5.9885 - 5.2342 1.00 2889 129 0.2856 0.2634 REMARK 3 4 5.2342 - 4.7568 1.00 2917 141 0.2622 0.2822 REMARK 3 5 4.7568 - 4.4166 1.00 2869 156 0.2456 0.2798 REMARK 3 6 4.4166 - 4.1566 1.00 2888 162 0.2623 0.2587 REMARK 3 7 4.1566 - 3.9487 0.99 2917 129 0.2871 0.2853 REMARK 3 8 3.9487 - 3.7770 1.00 2880 149 0.3068 0.3213 REMARK 3 9 3.7770 - 3.6317 1.00 2848 161 0.3183 0.3146 REMARK 3 10 3.6317 - 3.5065 1.00 2904 137 0.3293 0.3639 REMARK 3 11 3.5065 - 3.3970 0.99 2887 120 0.3546 0.4149 REMARK 3 12 3.3970 - 3.3000 0.99 2909 132 0.4028 0.4273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.560 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 125.5 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 190.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3729 REMARK 3 ANGLE : 0.503 5121 REMARK 3 CHIRALITY : 0.037 604 REMARK 3 PLANARITY : 0.004 666 REMARK 3 DIHEDRAL : 7.735 2176 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VHR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000246428. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR: LIQUID NITROGEN REMARK 200 COOLED; SAGITALLY FOCUSING 2ND REMARK 200 CRYSTAL, ROSENBAUM-ROCK VERTICAL REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 26, 2018 REMARK 200 BUILT=20180319 REMARK 200 DATA SCALING SOFTWARE : XSCALE VERSION JAN 26, 2018 REMARK 200 BUILT=20180319 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19380 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 35.727 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.29 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.53 REMARK 200 R MERGE FOR SHELL (I) : 2.18200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 2G38, 4L4W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M SODIUM CHLORIDE, 0.1M BIS-TRIS, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 109.54500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 52.21500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 109.54500 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 52.21500 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 109.54500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 52.21500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 109.54500 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 52.21500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 109.54500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 52.21500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 109.54500 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 52.21500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 109.54500 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 52.21500 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 109.54500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 109.54500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 52.21500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 MET A 5 REMARK 465 VAL A 79 REMARK 465 GLY A 80 REMARK 465 GLU A 81 REMARK 465 SER A 82 REMARK 465 GLY A 83 REMARK 465 ALA A 84 REMARK 465 SER A 85 REMARK 465 TYR A 86 REMARK 465 LEU A 87 REMARK 465 ALA A 88 REMARK 465 GLY A 89 REMARK 465 ASP A 90 REMARK 465 ALA A 91 REMARK 465 ALA A 92 REMARK 465 ALA A 93 REMARK 465 ALA A 94 REMARK 465 ALA A 95 REMARK 465 THR A 96 REMARK 465 TYR A 97 REMARK 465 GLY A 98 REMARK 465 VAL A 99 REMARK 465 VAL A 100 REMARK 465 GLY A 101 REMARK 465 GLY A 102 REMARK 465 MET B 1 REMARK 465 GLN B 61 REMARK 465 GLY B 62 REMARK 465 PRO B 63 REMARK 465 PRO B 169 REMARK 465 ARG B 170 REMARK 465 THR B 171 REMARK 465 VAL B 172 REMARK 465 PRO B 173 REMARK 465 ALA B 174 REMARK 465 PRO B 175 REMARK 465 THR B 176 REMARK 465 VAL B 177 REMARK 465 MET B 178 REMARK 465 MET C 3 REMARK 465 ALA C 4 REMARK 465 PRO C 5 REMARK 465 GLY C 92 REMARK 465 THR C 93 REMARK 465 GLY C 94 REMARK 465 ASN C 95 REMARK 465 GLY C 96 REMARK 465 GLY C 97 REMARK 465 GLU C 98 REMARK 465 ALA C 109 REMARK 465 GLY C 110 REMARK 465 ILE C 111 REMARK 465 MET C 112 REMARK 465 GLY C 113 REMARK 465 LYS C 114 REMARK 465 ALA C 115 REMARK 465 GLY C 116 REMARK 465 LYS C 117 REMARK 465 ALA C 118 REMARK 465 HIS C 119 REMARK 465 PRO C 120 REMARK 465 SER C 121 REMARK 465 GLY C 286 REMARK 465 GLN C 287 REMARK 465 ARG C 288 REMARK 465 LEU C 289 REMARK 465 SER C 290 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 64 OG REMARK 470 ARG C 43 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN B 132 O GLY C 232 1.52 REMARK 500 O LEU C 31 HH11 ARG C 129 1.56 REMARK 500 HG1 THR C 11 OD1 ASN C 14 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 -174.81 -69.13 REMARK 500 GLU A 8 -71.97 -82.53 REMARK 500 ALA A 37 78.20 -112.87 REMARK 500 LEU B 52 170.56 -59.40 REMARK 500 TRP B 58 66.38 -63.66 REMARK 500 ALA B 65 71.43 -118.70 REMARK 500 PHE B 128 -57.38 -126.23 REMARK 500 ALA C 7 -159.57 -162.22 REMARK 500 ASP C 39 134.75 -174.01 REMARK 500 SER C 61 -151.82 -72.79 REMARK 500 ASP C 63 -65.26 -104.82 REMARK 500 ASN C 130 49.36 -89.71 REMARK 500 ALA C 131 -9.16 73.04 REMARK 500 GLN C 132 -24.76 -148.58 REMARK 500 MET C 139 -166.29 -122.85 REMARK 500 LEU C 155 -167.05 -70.91 REMARK 500 TYR C 192 41.76 -79.88 REMARK 500 PHE C 207 52.27 -93.69 REMARK 500 PRO C 210 79.86 -69.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6UUJ RELATED DB: PDB REMARK 900 SAME COMPLEX IN SPACE GROUP P212121 DBREF 6VHR A 6 102 UNP L7N695 PE05_MYCTU 6 102 DBREF 6VHR B 1 178 UNP P9WI43 PPE04_MYCTU 1 178 DBREF 6VHR C 5 290 UNP B2HNX0 B2HNX0_MYCMM 5 290 SEQADV 6VHR GLY A 3 UNP L7N695 EXPRESSION TAG SEQADV 6VHR ALA A 4 UNP L7N695 EXPRESSION TAG SEQADV 6VHR MET A 5 UNP L7N695 EXPRESSION TAG SEQADV 6VHR MET C 3 UNP B2HNX0 INITIATING METHIONINE SEQADV 6VHR ALA C 4 UNP B2HNX0 EXPRESSION TAG SEQRES 1 A 100 GLY ALA MET VAL PRO GLU GLY LEU ALA ALA ALA SER ALA SEQRES 2 A 100 ALA VAL GLU ALA LEU THR ALA ARG LEU ALA ALA ALA HIS SEQRES 3 A 100 ALA SER ALA ALA PRO VAL ILE THR ALA VAL VAL PRO PRO SEQRES 4 A 100 ALA ALA ASP PRO VAL SER LEU GLN THR ALA ALA GLY PHE SEQRES 5 A 100 SER ALA GLN GLY VAL GLU HIS ALA VAL VAL THR ALA GLU SEQRES 6 A 100 GLY VAL GLU GLU LEU GLY ARG ALA GLY VAL GLY VAL GLY SEQRES 7 A 100 GLU SER GLY ALA SER TYR LEU ALA GLY ASP ALA ALA ALA SEQRES 8 A 100 ALA ALA THR TYR GLY VAL VAL GLY GLY SEQRES 1 B 178 MET ALA ALA PRO ILE TRP MET ALA SER PRO PRO GLU VAL SEQRES 2 B 178 HIS SER ALA LEU LEU SER ASN GLY PRO GLY PRO GLY SER SEQRES 3 B 178 LEU VAL ALA ALA ALA THR ALA TRP SER GLN LEU SER ALA SEQRES 4 B 178 GLU TYR ALA SER THR ALA ALA GLU LEU SER GLY LEU LEU SEQRES 5 B 178 GLY ALA VAL PRO GLY TRP ALA TRP GLN GLY PRO SER ALA SEQRES 6 B 178 GLU TRP TYR VAL ALA ALA HIS LEU PRO TYR VAL ALA TRP SEQRES 7 B 178 LEU THR GLN ALA SER ALA ASP ALA ALA GLY ALA ALA ALA SEQRES 8 B 178 GLN HIS GLU ALA ALA ALA ALA ALA TYR THR THR ALA LEU SEQRES 9 B 178 ALA ALA MET PRO THR LEU ALA GLU LEU ALA ALA ASN HIS SEQRES 10 B 178 VAL ILE HIS THR VAL LEU VAL ALA THR ASN PHE PHE GLY SEQRES 11 B 178 ILE ASN THR ILE PRO ILE THR LEU ASN GLU ALA ASP TYR SEQRES 12 B 178 VAL ARG MET TRP LEU GLN ALA ALA ALA VAL MET GLY LEU SEQRES 13 B 178 TYR GLN ALA ALA SER GLY ALA ALA LEU ALA SER ALA PRO SEQRES 14 B 178 ARG THR VAL PRO ALA PRO THR VAL MET SEQRES 1 C 288 MET ALA PRO ASN ALA VAL GLU LEU THR VAL GLU ASN ALA SEQRES 2 C 288 TRP PHE ILE ALA GLU MET VAL GLY ALA GLY THR PHE PRO SEQRES 3 C 288 TRP VAL LEU ALA ILE THR THR PRO TYR SER ASP GLU ALA SEQRES 4 C 288 GLN ARG SER ALA PHE PHE ALA ARG GLN ARG ASP GLU LEU SEQRES 5 C 288 THR GLN LEU GLY LEU LEU SER SER ASP GLY VAL VAL ASN SEQRES 6 C 288 PRO ALA VAL ALA GLU TRP ILE LYS VAL VAL CYS PHE PRO SEQRES 7 C 288 GLU ARG TRP LEU ASP LEU ARG TYR VAL GLY PRO GLY THR SEQRES 8 C 288 GLY ASN GLY GLY GLU ASP LEU LEU ARG GLY ILE VAL ALA SEQRES 9 C 288 GLN SER ALA GLY ILE MET GLY LYS ALA GLY LYS ALA HIS SEQRES 10 C 288 PRO SER PHE ASN THR VAL VAL ALA LEU ARG ASN ALA GLN SEQRES 11 C 288 LEU VAL THR PHE THR ALA MET ASP ILE ASP ASP PRO ARG SEQRES 12 C 288 ALA LEU VAL PRO VAL LEU GLY VAL GLY LEU SER ALA ARG SEQRES 13 C 288 PRO PRO ALA ARG PHE GLU GLU PHE SER MET PRO MET ARG SEQRES 14 C 288 VAL GLY ALA ARG ALA ASP GLU ARG LEU ARG SER GLY GLU SEQRES 15 C 288 SER LEU ASP GLU VAL LEU ASP TYR LEU GLY ILE PRO VAL SEQRES 16 C 288 SER ALA ARG PRO VAL VAL GLN ALA VAL PHE SER GLY PRO SEQRES 17 C 288 ARG SER TYR VAL GLU ILE VAL ALA GLY CYS ASN ARG ASP SEQRES 18 C 288 GLY GLU HIS THR THR THR ASP VAL GLY LEU SER ILE VAL SEQRES 19 C 288 ASP THR THR ALA GLY ARG VAL LEU VAL SER PRO SER ARG SEQRES 20 C 288 ALA PHE ASP GLY GLU TRP VAL SER THR PHE SER ALA GLY SEQRES 21 C 288 THR PRO PHE ALA THR ALA VAL ALA ILE ASP GLN LEU ILE SEQRES 22 C 288 ALA ASN LEU PRO ASP GLY GLN TRP PHE PRO GLY GLN ARG SEQRES 23 C 288 LEU SER HELIX 1 AA1 LEU A 10 ALA A 31 1 22 HELIX 2 AA2 ALA A 31 THR A 36 1 6 HELIX 3 AA3 ASP A 44 ARG A 74 1 31 HELIX 4 AA4 PRO B 10 ASN B 20 1 11 HELIX 5 AA5 PRO B 24 GLY B 50 1 27 HELIX 6 AA6 GLU B 66 LEU B 73 1 8 HELIX 7 AA7 PRO B 74 ALA B 105 1 32 HELIX 8 AA8 THR B 109 THR B 126 1 18 HELIX 9 AA9 PHE B 128 ASN B 132 5 5 HELIX 10 AB1 ILE B 134 LEU B 165 1 32 HELIX 11 AB2 VAL C 12 GLY C 23 1 12 HELIX 12 AB3 ASP C 39 ALA C 41 5 3 HELIX 13 AB4 GLN C 42 GLY C 58 1 17 HELIX 14 AB5 ASN C 67 PHE C 79 1 13 HELIX 15 AB6 ASP C 143 VAL C 148 5 6 HELIX 16 AB7 MET C 170 ARG C 181 1 12 HELIX 17 AB8 ALA C 199 VAL C 206 1 8 HELIX 18 AB9 PHE C 265 ASN C 277 1 13 SHEET 1 AA110 VAL C 8 THR C 11 0 SHEET 2 AA110 LEU C 133 MET C 139 -1 O VAL C 134 N LEU C 10 SHEET 3 AA110 THR C 124 ARG C 129 -1 N THR C 124 O MET C 139 SHEET 4 AA110 LEU C 100 GLN C 107 -1 N ARG C 102 O ARG C 129 SHEET 5 AA110 ARG C 82 VAL C 89 -1 N TYR C 88 O LEU C 101 SHEET 6 AA110 SER C 212 CYS C 220 -1 O VAL C 217 N ASP C 85 SHEET 7 AA110 LEU C 233 ASP C 237 -1 O LEU C 233 N ILE C 216 SHEET 8 AA110 ARG C 242 ARG C 249 -1 O VAL C 243 N VAL C 236 SHEET 9 AA110 TRP C 255 ALA C 261 -1 O THR C 258 N SER C 246 SHEET 10 AA110 PHE C 166 PRO C 169 -1 N PHE C 166 O PHE C 259 SHEET 1 AA2 7 VAL C 8 THR C 11 0 SHEET 2 AA2 7 LEU C 133 MET C 139 -1 O VAL C 134 N LEU C 10 SHEET 3 AA2 7 THR C 124 ARG C 129 -1 N THR C 124 O MET C 139 SHEET 4 AA2 7 LEU C 100 GLN C 107 -1 N ARG C 102 O ARG C 129 SHEET 5 AA2 7 ARG C 82 VAL C 89 -1 N TYR C 88 O LEU C 101 SHEET 6 AA2 7 SER C 212 CYS C 220 -1 O VAL C 217 N ASP C 85 SHEET 7 AA2 7 THR C 227 THR C 228 -1 O THR C 227 N CYS C 220 CRYST1 219.090 219.090 104.430 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009576 0.00000