HEADER IMMUNE SYSTEM 11-JAN-20 6VI2 TITLE STRUCTURE OF THE UNALIGNED FAB4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB4 LIGHT CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB4 HEAVY CHAIN; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SYNTHETIC FAB, LARGE TERMINASE, GENOME-PACKAGING, CRYSTALLIZATION KEYWDS 2 CHAPERONE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR G.CINGOLANI,R.LOKAREDDY,Y.KO REVDAT 3 11-OCT-23 6VI2 1 REMARK REVDAT 2 09-SEP-20 6VI2 1 JRNL REVDAT 1 02-SEP-20 6VI2 0 JRNL AUTH R.K.LOKAREDDY,Y.H.KO,N.HONG,S.G.DOLL,M.PADUCH,M.NIEDERWEIS, JRNL AUTH 2 A.A.KOSSIAKOFF,G.CINGOLANI JRNL TITL RECOGNITION OF AN ALPHA-HELICAL HAIRPIN IN P22 LARGE JRNL TITL 2 TERMINASE BY A SYNTHETIC ANTIBODY FRAGMENT. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 76 876 2020 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 32876063 JRNL DOI 10.1107/S2059798320009912 REMARK 2 REMARK 2 RESOLUTION. 1.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 293445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 0.680 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.9900 - 2.7700 0.99 22354 154 0.1548 0.1558 REMARK 3 2 2.7700 - 2.2000 0.99 22248 152 0.1614 0.1891 REMARK 3 3 2.2000 - 1.9200 0.99 22071 151 0.1441 0.1436 REMARK 3 4 1.9200 - 1.7500 0.99 22052 151 0.1431 0.1575 REMARK 3 5 1.7500 - 1.6200 0.98 21883 151 0.1453 0.1809 REMARK 3 6 1.6200 - 1.5300 0.98 21785 149 0.1428 0.1659 REMARK 3 7 1.5300 - 1.4500 0.98 21829 150 0.1519 0.1886 REMARK 3 8 1.4500 - 1.3900 0.98 21861 150 0.1605 0.2015 REMARK 3 9 1.3900 - 1.3300 0.98 21820 149 0.1736 0.1998 REMARK 3 10 1.3300 - 1.2900 0.98 21765 149 0.1949 0.2379 REMARK 3 11 1.2900 - 1.2500 0.98 21652 148 0.2041 0.2266 REMARK 3 12 1.2500 - 1.2100 0.95 21172 145 0.2277 0.2358 REMARK 3 13 1.2100 - 1.1800 0.78 17279 117 0.2628 0.3014 REMARK 3 14 1.1800 - 1.1500 0.52 11678 80 0.2838 0.2774 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 1296 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN B REMARK 3 SELECTION : (CHAIN D AND RESID 221 THROUGH 451) REMARK 3 ATOM PAIRS NUMBER : 1390 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VI2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000246440. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 292 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 293620 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.150 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 FOR THE DATA SET : 50.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.77900 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5EU7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 25% (W/V) REMARK 280 POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.92150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 215 REMARK 465 CYS B 216 REMARK 465 GLU B 217 REMARK 465 ILE B 218 REMARK 465 SER B 219 REMARK 465 GLU B 220 REMARK 465 CYS B 452 REMARK 465 ASP B 453 REMARK 465 LYS B 454 REMARK 465 THR B 455 REMARK 465 HIS B 456 REMARK 465 THR B 457 REMARK 465 GLU D 215 REMARK 465 CYS D 216 REMARK 465 GLU D 217 REMARK 465 LYS D 454 REMARK 465 THR D 455 REMARK 465 HIS D 456 REMARK 465 THR D 457 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 654 O HOH B 734 2.00 REMARK 500 O HOH C 564 O HOH C 566 2.04 REMARK 500 O HOH C 391 O HOH D 597 2.09 REMARK 500 O HOH C 336 O HOH C 388 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN D 232 C PRO D 233 N 0.179 REMARK 500 GLU D 384 C PRO D 385 N 0.161 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP C 17 O - C - N ANGL. DEV. = -11.2 DEGREES REMARK 500 ARG C 18 C - N - CA ANGL. DEV. = 17.4 DEGREES REMARK 500 ARG C 18 CA - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 ARG C 18 O - C - N ANGL. DEV. = 12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 30 -135.21 51.12 REMARK 500 ALA A 51 -43.89 74.50 REMARK 500 ALA A 84 172.40 179.15 REMARK 500 SER A 91 35.83 -143.24 REMARK 500 ASN A 140 66.08 60.28 REMARK 500 TYR B 329 -155.71 -137.07 REMARK 500 SER C 30 -133.02 50.30 REMARK 500 ALA C 51 -42.00 72.89 REMARK 500 SER C 91 35.21 -141.14 REMARK 500 TYR D 329 -57.61 -125.99 REMARK 500 SER D 366 44.45 -88.78 REMARK 500 THR D 367 60.76 -105.11 REMARK 500 SER D 368 118.88 -167.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 622 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH B 768 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH B 769 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH B 770 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH C 623 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH D 774 DISTANCE = 5.91 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6VHM RELATED DB: PDB REMARK 900 RELATED ID: 6VI1 RELATED DB: PDB DBREF 6VI2 A 0 214 PDB 6VI2 6VI2 0 214 DBREF 6VI2 B 215 457 PDB 6VI2 6VI2 215 457 DBREF 6VI2 C 0 214 PDB 6VI2 6VI2 0 214 DBREF 6VI2 D 215 457 PDB 6VI2 6VI2 215 457 SEQRES 1 A 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 A 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 A 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 A 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 A 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 A 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 A 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 A 215 SER VAL SER TYR MET GLY PRO LEU THR PHE GLY GLN GLY SEQRES 9 A 215 THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER SEQRES 10 A 215 VAL PHE ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER SEQRES 11 A 215 GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR SEQRES 12 A 215 PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA SEQRES 13 A 215 LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN SEQRES 14 A 215 ASP SER LYS ASP SER THR TYR SER LEU SER SER THR LEU SEQRES 15 A 215 THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR SEQRES 16 A 215 ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL SEQRES 17 A 215 THR LYS SER PHE ASN ARG GLY SEQRES 1 B 243 GLU CYS GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY SEQRES 2 B 243 GLY GLY LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER SEQRES 3 B 243 CYS ALA ALA SER GLY PHE ASN PHE TYR SER SER TYR ILE SEQRES 4 B 243 HIS TRP VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP SEQRES 5 B 243 VAL ALA SER ILE SER PRO TYR SER GLY SER THR SER TYR SEQRES 6 B 243 ALA ASP SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP SEQRES 7 B 243 THR SER LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU SEQRES 8 B 243 ARG ALA GLU ASP THR ALA VAL TYR TYR CYS ALA ARG TYR SEQRES 9 B 243 SER TRP PRO TRP VAL SER TYR LYS PRO TYR TYR GLY LEU SEQRES 10 B 243 HIS PHE SER ALA MET ASP TYR TRP GLY GLN GLY THR LEU SEQRES 11 B 243 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 12 B 243 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 13 B 243 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 14 B 243 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 15 B 243 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 16 B 243 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 17 B 243 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 18 B 243 HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU SEQRES 19 B 243 PRO LYS SER CYS ASP LYS THR HIS THR SEQRES 1 C 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 C 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 C 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 C 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 C 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 C 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 C 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 C 215 SER VAL SER TYR MET GLY PRO LEU THR PHE GLY GLN GLY SEQRES 9 C 215 THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER SEQRES 10 C 215 VAL PHE ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER SEQRES 11 C 215 GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR SEQRES 12 C 215 PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA SEQRES 13 C 215 LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN SEQRES 14 C 215 ASP SER LYS ASP SER THR TYR SER LEU SER SER THR LEU SEQRES 15 C 215 THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR SEQRES 16 C 215 ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL SEQRES 17 C 215 THR LYS SER PHE ASN ARG GLY SEQRES 1 D 243 GLU CYS GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY SEQRES 2 D 243 GLY GLY LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER SEQRES 3 D 243 CYS ALA ALA SER GLY PHE ASN PHE TYR SER SER TYR ILE SEQRES 4 D 243 HIS TRP VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP SEQRES 5 D 243 VAL ALA SER ILE SER PRO TYR SER GLY SER THR SER TYR SEQRES 6 D 243 ALA ASP SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP SEQRES 7 D 243 THR SER LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU SEQRES 8 D 243 ARG ALA GLU ASP THR ALA VAL TYR TYR CYS ALA ARG TYR SEQRES 9 D 243 SER TRP PRO TRP VAL SER TYR LYS PRO TYR TYR GLY LEU SEQRES 10 D 243 HIS PHE SER ALA MET ASP TYR TRP GLY GLN GLY THR LEU SEQRES 11 D 243 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 12 D 243 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 13 D 243 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 14 D 243 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 15 D 243 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 16 D 243 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 17 D 243 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 18 D 243 HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU SEQRES 19 D 243 PRO LYS SER CYS ASP LYS THR HIS THR FORMUL 5 HOH *1189(H2 O) HELIX 1 AA1 GLN A 79 PHE A 83 5 5 HELIX 2 AA2 SER A 123 LYS A 128 1 6 HELIX 3 AA3 LYS A 185 LYS A 190 1 6 HELIX 4 AA4 ARG B 306 THR B 310 5 5 HELIX 5 AA5 SER B 392 ALA B 394 5 3 HELIX 6 AA6 SER B 423 LEU B 425 5 3 HELIX 7 AA7 LYS B 437 ASN B 440 5 4 HELIX 8 AA8 GLN C 79 PHE C 83 5 5 HELIX 9 AA9 SER C 123 SER C 129 1 7 HELIX 10 AB1 LYS C 185 GLU C 189 1 5 HELIX 11 AB2 THR D 293 LYS D 295 5 3 HELIX 12 AB3 ARG D 306 THR D 310 5 5 HELIX 13 AB4 SER D 392 ALA D 394 5 3 HELIX 14 AB5 SER D 423 LEU D 425 5 3 HELIX 15 AB6 LYS D 437 ASN D 440 5 4 SHEET 1 AA1 4 MET A 4 SER A 7 0 SHEET 2 AA1 4 VAL A 19 ALA A 25 -1 O ARG A 24 N THR A 5 SHEET 3 AA1 4 ASP A 70 ILE A 75 -1 O PHE A 71 N CYS A 23 SHEET 4 AA1 4 PHE A 62 SER A 67 -1 N SER A 67 O ASP A 70 SHEET 1 AA2 6 SER A 10 SER A 14 0 SHEET 2 AA2 6 THR A 104 LYS A 109 1 O GLU A 107 N LEU A 11 SHEET 3 AA2 6 ALA A 84 GLN A 90 -1 N ALA A 84 O VAL A 106 SHEET 4 AA2 6 VAL A 33 GLN A 38 -1 N GLN A 38 O THR A 85 SHEET 5 AA2 6 LYS A 45 TYR A 49 -1 O LEU A 47 N TRP A 35 SHEET 6 AA2 6 SER A 53 LEU A 54 -1 O SER A 53 N TYR A 49 SHEET 1 AA3 4 SER A 10 SER A 14 0 SHEET 2 AA3 4 THR A 104 LYS A 109 1 O GLU A 107 N LEU A 11 SHEET 3 AA3 4 ALA A 84 GLN A 90 -1 N ALA A 84 O VAL A 106 SHEET 4 AA3 4 THR A 99 PHE A 100 -1 O THR A 99 N GLN A 90 SHEET 1 AA4 4 SER A 116 PHE A 120 0 SHEET 2 AA4 4 THR A 131 PHE A 141 -1 O ASN A 139 N SER A 116 SHEET 3 AA4 4 TYR A 175 SER A 184 -1 O LEU A 183 N ALA A 132 SHEET 4 AA4 4 SER A 161 VAL A 165 -1 N GLN A 162 O THR A 180 SHEET 1 AA5 4 ALA A 155 LEU A 156 0 SHEET 2 AA5 4 LYS A 147 VAL A 152 -1 N VAL A 152 O ALA A 155 SHEET 3 AA5 4 VAL A 193 THR A 199 -1 O GLU A 197 N GLN A 149 SHEET 4 AA5 4 VAL A 207 ASN A 212 -1 O VAL A 207 N VAL A 198 SHEET 1 AA6 4 GLN B 222 SER B 226 0 SHEET 2 AA6 4 LEU B 237 SER B 244 -1 O SER B 244 N GLN B 222 SHEET 3 AA6 4 THR B 297 MET B 302 -1 O MET B 302 N LEU B 237 SHEET 4 AA6 4 PHE B 287 ASP B 292 -1 N THR B 288 O GLN B 301 SHEET 1 AA7 6 LEU B 230 VAL B 231 0 SHEET 2 AA7 6 THR B 343 VAL B 347 1 O THR B 346 N VAL B 231 SHEET 3 AA7 6 ALA B 311 TYR B 318 -1 N TYR B 313 O THR B 343 SHEET 4 AA7 6 TYR B 252 GLN B 258 -1 N VAL B 256 O TYR B 314 SHEET 5 AA7 6 LEU B 264 ILE B 270 -1 O VAL B 267 N TRP B 255 SHEET 6 AA7 6 THR B 277 TYR B 279 -1 O SER B 278 N SER B 269 SHEET 1 AA8 4 LEU B 230 VAL B 231 0 SHEET 2 AA8 4 THR B 343 VAL B 347 1 O THR B 346 N VAL B 231 SHEET 3 AA8 4 ALA B 311 TYR B 318 -1 N TYR B 313 O THR B 343 SHEET 4 AA8 4 TYR B 338 TRP B 339 -1 O TYR B 338 N ARG B 317 SHEET 1 AA9 2 VAL B 323 TYR B 325 0 SHEET 2 AA9 2 LEU B 331 PHE B 333 -1 O HIS B 332 N SER B 324 SHEET 1 AB1 4 SER B 356 LEU B 360 0 SHEET 2 AB1 4 THR B 371 TYR B 381 -1 O LYS B 379 N SER B 356 SHEET 3 AB1 4 TYR B 412 PRO B 421 -1 O LEU B 414 N VAL B 378 SHEET 4 AB1 4 VAL B 399 THR B 401 -1 N HIS B 400 O VAL B 417 SHEET 1 AB2 4 SER B 356 LEU B 360 0 SHEET 2 AB2 4 THR B 371 TYR B 381 -1 O LYS B 379 N SER B 356 SHEET 3 AB2 4 TYR B 412 PRO B 421 -1 O LEU B 414 N VAL B 378 SHEET 4 AB2 4 VAL B 405 LEU B 406 -1 N VAL B 405 O SER B 413 SHEET 1 AB3 3 THR B 387 TRP B 390 0 SHEET 2 AB3 3 TYR B 430 HIS B 436 -1 O ASN B 433 N SER B 389 SHEET 3 AB3 3 THR B 441 VAL B 447 -1 O VAL B 443 N VAL B 434 SHEET 1 AB4 4 MET C 4 SER C 7 0 SHEET 2 AB4 4 VAL C 19 ALA C 25 -1 O ARG C 24 N THR C 5 SHEET 3 AB4 4 ASP C 70 ILE C 75 -1 O LEU C 73 N ILE C 21 SHEET 4 AB4 4 PHE C 62 SER C 67 -1 N SER C 65 O THR C 72 SHEET 1 AB5 6 SER C 10 ALA C 13 0 SHEET 2 AB5 6 THR C 104 ILE C 108 1 O GLU C 107 N LEU C 11 SHEET 3 AB5 6 ALA C 84 GLN C 90 -1 N ALA C 84 O VAL C 106 SHEET 4 AB5 6 VAL C 33 GLN C 38 -1 N GLN C 38 O THR C 85 SHEET 5 AB5 6 LYS C 45 TYR C 49 -1 O LEU C 47 N TRP C 35 SHEET 6 AB5 6 SER C 53 LEU C 54 -1 O SER C 53 N TYR C 49 SHEET 1 AB6 4 SER C 10 ALA C 13 0 SHEET 2 AB6 4 THR C 104 ILE C 108 1 O GLU C 107 N LEU C 11 SHEET 3 AB6 4 ALA C 84 GLN C 90 -1 N ALA C 84 O VAL C 106 SHEET 4 AB6 4 THR C 99 PHE C 100 -1 O THR C 99 N GLN C 90 SHEET 1 AB7 4 SER C 116 PHE C 120 0 SHEET 2 AB7 4 THR C 131 PHE C 141 -1 O ASN C 139 N SER C 116 SHEET 3 AB7 4 TYR C 175 SER C 184 -1 O LEU C 177 N LEU C 138 SHEET 4 AB7 4 SER C 161 VAL C 165 -1 N GLN C 162 O THR C 180 SHEET 1 AB8 4 ALA C 155 LEU C 156 0 SHEET 2 AB8 4 LYS C 147 VAL C 152 -1 N VAL C 152 O ALA C 155 SHEET 3 AB8 4 VAL C 193 THR C 199 -1 O GLU C 197 N GLN C 149 SHEET 4 AB8 4 VAL C 207 ASN C 212 -1 O VAL C 207 N VAL C 198 SHEET 1 AB9 4 GLN D 222 SER D 226 0 SHEET 2 AB9 4 LEU D 237 SER D 244 -1 O ALA D 242 N VAL D 224 SHEET 3 AB9 4 THR D 297 MET D 302 -1 O MET D 302 N LEU D 237 SHEET 4 AB9 4 PHE D 287 ASP D 292 -1 N THR D 288 O GLN D 301 SHEET 1 AC1 6 LEU D 230 VAL D 231 0 SHEET 2 AC1 6 THR D 343 VAL D 347 1 O THR D 346 N VAL D 231 SHEET 3 AC1 6 ALA D 311 TYR D 318 -1 N TYR D 313 O THR D 343 SHEET 4 AC1 6 TYR D 252 GLN D 258 -1 N VAL D 256 O TYR D 314 SHEET 5 AC1 6 LEU D 264 ILE D 270 -1 O VAL D 267 N TRP D 255 SHEET 6 AC1 6 THR D 277 TYR D 279 -1 O SER D 278 N SER D 269 SHEET 1 AC2 2 VAL D 323 LYS D 326 0 SHEET 2 AC2 2 GLY D 330 PHE D 333 -1 O HIS D 332 N SER D 324 SHEET 1 AC3 4 SER D 356 LEU D 360 0 SHEET 2 AC3 4 THR D 371 TYR D 381 -1 O LEU D 377 N PHE D 358 SHEET 3 AC3 4 TYR D 412 PRO D 421 -1 O LEU D 414 N VAL D 378 SHEET 4 AC3 4 VAL D 399 THR D 401 -1 N HIS D 400 O VAL D 417 SHEET 1 AC4 4 SER D 356 LEU D 360 0 SHEET 2 AC4 4 THR D 371 TYR D 381 -1 O LEU D 377 N PHE D 358 SHEET 3 AC4 4 TYR D 412 PRO D 421 -1 O LEU D 414 N VAL D 378 SHEET 4 AC4 4 VAL D 405 LEU D 406 -1 N VAL D 405 O SER D 413 SHEET 1 AC5 3 THR D 387 TRP D 390 0 SHEET 2 AC5 3 TYR D 430 HIS D 436 -1 O ASN D 433 N SER D 389 SHEET 3 AC5 3 THR D 441 VAL D 447 -1 O VAL D 443 N VAL D 434 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.09 SSBOND 2 CYS A 136 CYS A 196 1555 1555 2.11 SSBOND 3 CYS B 241 CYS B 315 1555 1555 2.03 SSBOND 4 CYS B 376 CYS B 432 1555 1555 2.03 SSBOND 5 CYS C 23 CYS C 88 1555 1555 2.09 SSBOND 6 CYS C 136 CYS C 196 1555 1555 2.11 SSBOND 7 CYS D 241 CYS D 315 1555 1555 2.08 SSBOND 8 CYS D 376 CYS D 432 1555 1555 2.04 CISPEP 1 SER A 7 PRO A 8 0 -7.49 CISPEP 2 TYR A 142 PRO A 143 0 0.94 CISPEP 3 TRP B 320 PRO B 321 0 -1.76 CISPEP 4 PHE B 382 PRO B 383 0 -7.39 CISPEP 5 GLU B 384 PRO B 385 0 -1.20 CISPEP 6 SER C 7 PRO C 8 0 -9.12 CISPEP 7 TYR C 142 PRO C 143 0 1.77 CISPEP 8 TRP D 320 PRO D 321 0 -0.76 CISPEP 9 PHE D 382 PRO D 383 0 -8.62 CISPEP 10 GLU D 384 PRO D 385 0 0.75 CRYST1 64.765 65.843 107.419 90.00 99.83 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015440 0.000000 0.002674 0.00000 SCALE2 0.000000 0.015188 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009448 0.00000