data_6VKJ # _entry.id 6VKJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6VKJ pdb_00006vkj 10.2210/pdb6vkj/pdb WWPDB D_1000245615 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VKJ _pdbx_database_status.recvd_initial_deposition_date 2020-01-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Roy, S.' 1 ? 'Wang, B.' 2 ? 'Tian, Y.' 3 ? 'Yin, Q.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of the G domain of human guanylate-binding protein 2 (hGBP2) in complex with GDP' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Roy, S.' 1 ? primary 'Wang, B.' 2 ? primary 'Tian, Y.' 3 ? primary 'Yin, Q.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6VKJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 87.951 _cell.length_a_esd ? _cell.length_b 87.951 _cell.length_b_esd ? _cell.length_c 105.279 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VKJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Guanylate-binding protein 2' 34010.930 1 3.6.5.- ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 water nat water 18.015 130 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GTP-binding protein 2,HuGBP-2,Guanine nucleotide-binding protein 2,Interferon-induced guanylate-binding protein 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;INLPGPMSLIDNTKGQLVVNPEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKKNGFSLGSTVKSHTKGIWMWCVP HPKKPEHTLVLLDTEGLGDIEKGDNENDSWIFALAILLSSTFVYNSMGTINQQAMDQLHYVTELTDRIKANSSPGNNSVD DSADFVSFFPAFVWTLRDFTLELEVDGEPITADDYLELSLKLRKGTDKKSKSFNDPRLCIRKFFPKRKCFVFDWPAPKKY LAHLEQLKEEELNPDFIEQVAEFCSYILSHSNVKTLSGGIPVNGPRLESLVLTYVNAISSGDLPC ; _entity_poly.pdbx_seq_one_letter_code_can ;INLPGPMSLIDNTKGQLVVNPEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKKNGFSLGSTVKSHTKGIWMWCVP HPKKPEHTLVLLDTEGLGDIEKGDNENDSWIFALAILLSSTFVYNSMGTINQQAMDQLHYVTELTDRIKANSSPGNNSVD DSADFVSFFPAFVWTLRDFTLELEVDGEPITADDYLELSLKLRKGTDKKSKSFNDPRLCIRKFFPKRKCFVFDWPAPKKY LAHLEQLKEEELNPDFIEQVAEFCSYILSHSNVKTLSGGIPVNGPRLESLVLTYVNAISSGDLPC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ASN n 1 3 LEU n 1 4 PRO n 1 5 GLY n 1 6 PRO n 1 7 MET n 1 8 SER n 1 9 LEU n 1 10 ILE n 1 11 ASP n 1 12 ASN n 1 13 THR n 1 14 LYS n 1 15 GLY n 1 16 GLN n 1 17 LEU n 1 18 VAL n 1 19 VAL n 1 20 ASN n 1 21 PRO n 1 22 GLU n 1 23 ALA n 1 24 LEU n 1 25 LYS n 1 26 ILE n 1 27 LEU n 1 28 SER n 1 29 ALA n 1 30 ILE n 1 31 THR n 1 32 GLN n 1 33 PRO n 1 34 VAL n 1 35 VAL n 1 36 VAL n 1 37 VAL n 1 38 ALA n 1 39 ILE n 1 40 VAL n 1 41 GLY n 1 42 LEU n 1 43 TYR n 1 44 ARG n 1 45 THR n 1 46 GLY n 1 47 LYS n 1 48 SER n 1 49 TYR n 1 50 LEU n 1 51 MET n 1 52 ASN n 1 53 LYS n 1 54 LEU n 1 55 ALA n 1 56 GLY n 1 57 LYS n 1 58 LYS n 1 59 ASN n 1 60 GLY n 1 61 PHE n 1 62 SER n 1 63 LEU n 1 64 GLY n 1 65 SER n 1 66 THR n 1 67 VAL n 1 68 LYS n 1 69 SER n 1 70 HIS n 1 71 THR n 1 72 LYS n 1 73 GLY n 1 74 ILE n 1 75 TRP n 1 76 MET n 1 77 TRP n 1 78 CYS n 1 79 VAL n 1 80 PRO n 1 81 HIS n 1 82 PRO n 1 83 LYS n 1 84 LYS n 1 85 PRO n 1 86 GLU n 1 87 HIS n 1 88 THR n 1 89 LEU n 1 90 VAL n 1 91 LEU n 1 92 LEU n 1 93 ASP n 1 94 THR n 1 95 GLU n 1 96 GLY n 1 97 LEU n 1 98 GLY n 1 99 ASP n 1 100 ILE n 1 101 GLU n 1 102 LYS n 1 103 GLY n 1 104 ASP n 1 105 ASN n 1 106 GLU n 1 107 ASN n 1 108 ASP n 1 109 SER n 1 110 TRP n 1 111 ILE n 1 112 PHE n 1 113 ALA n 1 114 LEU n 1 115 ALA n 1 116 ILE n 1 117 LEU n 1 118 LEU n 1 119 SER n 1 120 SER n 1 121 THR n 1 122 PHE n 1 123 VAL n 1 124 TYR n 1 125 ASN n 1 126 SER n 1 127 MET n 1 128 GLY n 1 129 THR n 1 130 ILE n 1 131 ASN n 1 132 GLN n 1 133 GLN n 1 134 ALA n 1 135 MET n 1 136 ASP n 1 137 GLN n 1 138 LEU n 1 139 HIS n 1 140 TYR n 1 141 VAL n 1 142 THR n 1 143 GLU n 1 144 LEU n 1 145 THR n 1 146 ASP n 1 147 ARG n 1 148 ILE n 1 149 LYS n 1 150 ALA n 1 151 ASN n 1 152 SER n 1 153 SER n 1 154 PRO n 1 155 GLY n 1 156 ASN n 1 157 ASN n 1 158 SER n 1 159 VAL n 1 160 ASP n 1 161 ASP n 1 162 SER n 1 163 ALA n 1 164 ASP n 1 165 PHE n 1 166 VAL n 1 167 SER n 1 168 PHE n 1 169 PHE n 1 170 PRO n 1 171 ALA n 1 172 PHE n 1 173 VAL n 1 174 TRP n 1 175 THR n 1 176 LEU n 1 177 ARG n 1 178 ASP n 1 179 PHE n 1 180 THR n 1 181 LEU n 1 182 GLU n 1 183 LEU n 1 184 GLU n 1 185 VAL n 1 186 ASP n 1 187 GLY n 1 188 GLU n 1 189 PRO n 1 190 ILE n 1 191 THR n 1 192 ALA n 1 193 ASP n 1 194 ASP n 1 195 TYR n 1 196 LEU n 1 197 GLU n 1 198 LEU n 1 199 SER n 1 200 LEU n 1 201 LYS n 1 202 LEU n 1 203 ARG n 1 204 LYS n 1 205 GLY n 1 206 THR n 1 207 ASP n 1 208 LYS n 1 209 LYS n 1 210 SER n 1 211 LYS n 1 212 SER n 1 213 PHE n 1 214 ASN n 1 215 ASP n 1 216 PRO n 1 217 ARG n 1 218 LEU n 1 219 CYS n 1 220 ILE n 1 221 ARG n 1 222 LYS n 1 223 PHE n 1 224 PHE n 1 225 PRO n 1 226 LYS n 1 227 ARG n 1 228 LYS n 1 229 CYS n 1 230 PHE n 1 231 VAL n 1 232 PHE n 1 233 ASP n 1 234 TRP n 1 235 PRO n 1 236 ALA n 1 237 PRO n 1 238 LYS n 1 239 LYS n 1 240 TYR n 1 241 LEU n 1 242 ALA n 1 243 HIS n 1 244 LEU n 1 245 GLU n 1 246 GLN n 1 247 LEU n 1 248 LYS n 1 249 GLU n 1 250 GLU n 1 251 GLU n 1 252 LEU n 1 253 ASN n 1 254 PRO n 1 255 ASP n 1 256 PHE n 1 257 ILE n 1 258 GLU n 1 259 GLN n 1 260 VAL n 1 261 ALA n 1 262 GLU n 1 263 PHE n 1 264 CYS n 1 265 SER n 1 266 TYR n 1 267 ILE n 1 268 LEU n 1 269 SER n 1 270 HIS n 1 271 SER n 1 272 ASN n 1 273 VAL n 1 274 LYS n 1 275 THR n 1 276 LEU n 1 277 SER n 1 278 GLY n 1 279 GLY n 1 280 ILE n 1 281 PRO n 1 282 VAL n 1 283 ASN n 1 284 GLY n 1 285 PRO n 1 286 ARG n 1 287 LEU n 1 288 GLU n 1 289 SER n 1 290 LEU n 1 291 VAL n 1 292 LEU n 1 293 THR n 1 294 TYR n 1 295 VAL n 1 296 ASN n 1 297 ALA n 1 298 ILE n 1 299 SER n 1 300 SER n 1 301 GLY n 1 302 ASP n 1 303 LEU n 1 304 PRO n 1 305 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 305 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GBP2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GBP2_HUMAN _struct_ref.pdbx_db_accession P32456 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;INLPGPMSLIDNTKGQLVVNPEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKKNGFSLGSTVKSHTKGIWMWCVP HPKKPEHTLVLLDTEGLGDIEKGDNENDSWIFALAILLSSTFVYNSMGTINQQAMDQLHYVTELTDRIKANSSPGNNSVD DSADFVSFFPAFVWTLRDFTLELEVDGEPITADDYLELSLKLRKGTDKKSKSFNDPRLCIRKFFPKRKCFVFDWPAPKKY LAHLEQLKEEELNPDFIEQVAEFCSYILSHSNVKTLSGGIPVNGPRLESLVLTYVNAISSGDLPC ; _struct_ref.pdbx_align_begin 5 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6VKJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 305 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32456 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 309 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 309 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VKJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.04M KH2PO4, 12% PEG 8000, 18% glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-07-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.920126 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS-II BEAMLINE 17-ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.920126 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID-1 _diffrn_source.pdbx_synchrotron_site NSLS-II # _reflns.B_iso_Wilson_estimate 39.80 _reflns.entry_id 6VKJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.105 _reflns.d_resolution_low 45.17 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 45429 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.31 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.320 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.255 _reflns.pdbx_Rpim_I_all 0.081 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.985 _reflns.pdbx_CC_star 0.996 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.105 _reflns_shell.d_res_low 2.181 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 4533 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.471 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.603 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.482 _reflns_shell.pdbx_CC_star 0.806 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 144.030 _refine.B_iso_mean 54.1373 _refine.B_iso_min 21.490 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VKJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1050 _refine.ls_d_res_low 45.1680 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24391 _refine.ls_number_reflns_R_free 2000 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.2600 _refine.ls_percent_reflns_R_free 8.2000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1845 _refine.ls_R_factor_R_free 0.2260 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1809 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2B92:A _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.2600 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.1050 _refine_hist.d_res_low 45.1680 _refine_hist.number_atoms_solvent 130 _refine_hist.number_atoms_total 2562 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 305 _refine_hist.pdbx_B_iso_mean_ligand 51.61 _refine_hist.pdbx_B_iso_mean_solvent 30.00 _refine_hist.pdbx_number_atoms_protein 2394 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1050 2.1576 . . 125 1400 89.0000 . . . 0.3339 0.0000 0.2743 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1576 2.2160 . . 141 1583 100.0000 . . . 0.2705 0.0000 0.2345 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2160 2.2812 . . 141 1577 100.0000 . . . 0.3100 0.0000 0.2214 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2812 2.3548 . . 141 1586 100.0000 . . . 0.2637 0.0000 0.2112 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3548 2.4389 . . 144 1594 100.0000 . . . 0.2623 0.0000 0.2083 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4389 2.5366 . . 140 1573 100.0000 . . . 0.2250 0.0000 0.1947 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5366 2.6520 . . 143 1597 100.0000 . . . 0.2360 0.0000 0.1860 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6520 2.7918 . . 141 1588 100.0000 . . . 0.2633 0.0000 0.1938 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7918 2.9667 . . 143 1608 100.0000 . . . 0.2484 0.0000 0.2000 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9667 3.1957 . . 145 1616 100.0000 . . . 0.2374 0.0000 0.1973 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1957 3.5172 . . 145 1624 100.0000 . . . 0.2364 0.0000 0.1824 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5172 4.0259 . . 145 1622 100.0000 . . . 0.1986 0.0000 0.1621 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0259 5.0711 . . 148 1658 100.0000 . . . 0.2048 0.0000 0.1399 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.0711 45.1680 . . 158 1765 100.0000 . . . 0.1970 0.0000 0.1829 . . . . . . . . . . . # _struct.entry_id 6VKJ _struct.title 'Crystal structure of the G domain of human guanylate-binding protein 2 (hGBP2) in complex with GDP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VKJ _struct_keywords.text 'large GTPase; immune signaling; NTPase; guanylate binding, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 20 ? ALA A 29 ? ASN A 24 ALA A 33 1 ? 10 HELX_P HELX_P2 AA2 GLY A 46 ? GLY A 56 ? GLY A 50 GLY A 60 1 ? 11 HELX_P HELX_P3 AA3 SER A 62 ? VAL A 67 ? SER A 66 VAL A 71 1 ? 6 HELX_P HELX_P4 AA4 ASP A 99 ? GLY A 103 ? ASP A 103 GLY A 107 5 ? 5 HELX_P HELX_P5 AA5 SER A 109 ? SER A 119 ? SER A 113 SER A 123 1 ? 11 HELX_P HELX_P6 AA6 ASN A 131 ? ASN A 151 ? ASN A 135 ASN A 155 1 ? 21 HELX_P HELX_P7 AA7 SER A 162 ? PHE A 169 ? SER A 166 PHE A 173 1 ? 8 HELX_P HELX_P8 AA8 THR A 191 ? LYS A 201 ? THR A 195 LYS A 205 1 ? 11 HELX_P HELX_P9 AA9 PHE A 213 ? PHE A 224 ? PHE A 217 PHE A 228 1 ? 12 HELX_P HELX_P10 AB1 PRO A 237 ? LEU A 247 ? PRO A 241 LEU A 251 5 ? 11 HELX_P HELX_P11 AB2 LYS A 248 ? LEU A 252 ? LYS A 252 LEU A 256 5 ? 5 HELX_P HELX_P12 AB3 ASN A 253 ? SER A 271 ? ASN A 257 SER A 275 1 ? 19 HELX_P HELX_P13 AB4 ASN A 283 ? SER A 300 ? ASN A 287 SER A 304 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 18 ? VAL A 19 ? VAL A 22 VAL A 23 AA1 2 MET A 7 ? ASP A 11 ? MET A 11 ASP A 15 AA1 3 GLY A 73 ? PRO A 80 ? GLY A 77 PRO A 84 AA1 4 THR A 88 ? GLU A 95 ? THR A 92 GLU A 99 AA1 5 VAL A 34 ? VAL A 40 ? VAL A 38 VAL A 44 AA1 6 THR A 121 ? MET A 127 ? THR A 125 MET A 131 AA1 7 ALA A 171 ? ARG A 177 ? ALA A 175 ARG A 181 AA1 8 ARG A 227 ? VAL A 231 ? ARG A 231 VAL A 235 AA2 1 GLU A 184 ? VAL A 185 ? GLU A 188 VAL A 189 AA2 2 GLU A 188 ? PRO A 189 ? GLU A 192 PRO A 193 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 18 ? O VAL A 22 N ASP A 11 ? N ASP A 15 AA1 2 3 N MET A 7 ? N MET A 11 O MET A 76 ? O MET A 80 AA1 3 4 N TRP A 75 ? N TRP A 79 O ASP A 93 ? O ASP A 97 AA1 4 5 O VAL A 90 ? O VAL A 94 N VAL A 35 ? N VAL A 39 AA1 5 6 N ALA A 38 ? N ALA A 42 O VAL A 123 ? O VAL A 127 AA1 6 7 N TYR A 124 ? N TYR A 128 O THR A 175 ? O THR A 179 AA1 7 8 N LEU A 176 ? N LEU A 180 O PHE A 230 ? O PHE A 234 AA2 1 2 N VAL A 185 ? N VAL A 189 O GLU A 188 ? O GLU A 192 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GDP _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 16 _struct_site.details 'binding site for residue GDP A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ARG A 44 ? ARG A 48 . ? 1_555 ? 2 AC1 16 THR A 45 ? THR A 49 . ? 1_555 ? 3 AC1 16 GLY A 46 ? GLY A 50 . ? 1_555 ? 4 AC1 16 LYS A 47 ? LYS A 51 . ? 1_555 ? 5 AC1 16 SER A 48 ? SER A 52 . ? 1_555 ? 6 AC1 16 TYR A 49 ? TYR A 53 . ? 1_555 ? 7 AC1 16 GLY A 64 ? GLY A 68 . ? 1_555 ? 8 AC1 16 GLU A 95 ? GLU A 99 . ? 1_555 ? 9 AC1 16 MET A 127 ? MET A 131 . ? 1_555 ? 10 AC1 16 ARG A 177 ? ARG A 181 . ? 1_555 ? 11 AC1 16 ASP A 178 ? ASP A 182 . ? 1_555 ? 12 AC1 16 PRO A 235 ? PRO A 239 . ? 1_555 ? 13 AC1 16 LEU A 241 ? LEU A 245 . ? 1_555 ? 14 AC1 16 ALA A 242 ? ALA A 246 . ? 1_555 ? 15 AC1 16 LEU A 244 ? LEU A 248 . ? 1_555 ? 16 AC1 16 HOH C . ? HOH A 511 . ? 1_555 ? # _atom_sites.entry_id 6VKJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011370 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011370 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009499 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 5 5 ILE ILE A . n A 1 2 ASN 2 6 6 ASN ASN A . n A 1 3 LEU 3 7 7 LEU LEU A . n A 1 4 PRO 4 8 8 PRO PRO A . n A 1 5 GLY 5 9 9 GLY GLY A . n A 1 6 PRO 6 10 10 PRO PRO A . n A 1 7 MET 7 11 11 MET MET A . n A 1 8 SER 8 12 12 SER SER A . n A 1 9 LEU 9 13 13 LEU LEU A . n A 1 10 ILE 10 14 14 ILE ILE A . n A 1 11 ASP 11 15 15 ASP ASP A . n A 1 12 ASN 12 16 16 ASN ASN A . n A 1 13 THR 13 17 17 THR THR A . n A 1 14 LYS 14 18 18 LYS LYS A . n A 1 15 GLY 15 19 19 GLY GLY A . n A 1 16 GLN 16 20 20 GLN GLN A . n A 1 17 LEU 17 21 21 LEU LEU A . n A 1 18 VAL 18 22 22 VAL VAL A . n A 1 19 VAL 19 23 23 VAL VAL A . n A 1 20 ASN 20 24 24 ASN ASN A . n A 1 21 PRO 21 25 25 PRO PRO A . n A 1 22 GLU 22 26 26 GLU GLU A . n A 1 23 ALA 23 27 27 ALA ALA A . n A 1 24 LEU 24 28 28 LEU LEU A . n A 1 25 LYS 25 29 29 LYS LYS A . n A 1 26 ILE 26 30 30 ILE ILE A . n A 1 27 LEU 27 31 31 LEU LEU A . n A 1 28 SER 28 32 32 SER SER A . n A 1 29 ALA 29 33 33 ALA ALA A . n A 1 30 ILE 30 34 34 ILE ILE A . n A 1 31 THR 31 35 35 THR THR A . n A 1 32 GLN 32 36 36 GLN GLN A . n A 1 33 PRO 33 37 37 PRO PRO A . n A 1 34 VAL 34 38 38 VAL VAL A . n A 1 35 VAL 35 39 39 VAL VAL A . n A 1 36 VAL 36 40 40 VAL VAL A . n A 1 37 VAL 37 41 41 VAL VAL A . n A 1 38 ALA 38 42 42 ALA ALA A . n A 1 39 ILE 39 43 43 ILE ILE A . n A 1 40 VAL 40 44 44 VAL VAL A . n A 1 41 GLY 41 45 45 GLY GLY A . n A 1 42 LEU 42 46 46 LEU LEU A . n A 1 43 TYR 43 47 47 TYR TYR A . n A 1 44 ARG 44 48 48 ARG ARG A . n A 1 45 THR 45 49 49 THR THR A . n A 1 46 GLY 46 50 50 GLY GLY A . n A 1 47 LYS 47 51 51 LYS LYS A . n A 1 48 SER 48 52 52 SER SER A . n A 1 49 TYR 49 53 53 TYR TYR A . n A 1 50 LEU 50 54 54 LEU LEU A . n A 1 51 MET 51 55 55 MET MET A . n A 1 52 ASN 52 56 56 ASN ASN A . n A 1 53 LYS 53 57 57 LYS LYS A . n A 1 54 LEU 54 58 58 LEU LEU A . n A 1 55 ALA 55 59 59 ALA ALA A . n A 1 56 GLY 56 60 60 GLY GLY A . n A 1 57 LYS 57 61 61 LYS LYS A . n A 1 58 LYS 58 62 62 LYS LYS A . n A 1 59 ASN 59 63 63 ASN ASN A . n A 1 60 GLY 60 64 64 GLY GLY A . n A 1 61 PHE 61 65 65 PHE PHE A . n A 1 62 SER 62 66 66 SER SER A . n A 1 63 LEU 63 67 67 LEU LEU A . n A 1 64 GLY 64 68 68 GLY GLY A . n A 1 65 SER 65 69 69 SER SER A . n A 1 66 THR 66 70 70 THR THR A . n A 1 67 VAL 67 71 71 VAL VAL A . n A 1 68 LYS 68 72 72 LYS LYS A . n A 1 69 SER 69 73 73 SER SER A . n A 1 70 HIS 70 74 74 HIS HIS A . n A 1 71 THR 71 75 75 THR THR A . n A 1 72 LYS 72 76 76 LYS LYS A . n A 1 73 GLY 73 77 77 GLY GLY A . n A 1 74 ILE 74 78 78 ILE ILE A . n A 1 75 TRP 75 79 79 TRP TRP A . n A 1 76 MET 76 80 80 MET MET A . n A 1 77 TRP 77 81 81 TRP TRP A . n A 1 78 CYS 78 82 82 CYS CYS A . n A 1 79 VAL 79 83 83 VAL VAL A . n A 1 80 PRO 80 84 84 PRO PRO A . n A 1 81 HIS 81 85 85 HIS HIS A . n A 1 82 PRO 82 86 86 PRO PRO A . n A 1 83 LYS 83 87 87 LYS LYS A . n A 1 84 LYS 84 88 88 LYS LYS A . n A 1 85 PRO 85 89 89 PRO PRO A . n A 1 86 GLU 86 90 90 GLU GLU A . n A 1 87 HIS 87 91 91 HIS HIS A . n A 1 88 THR 88 92 92 THR THR A . n A 1 89 LEU 89 93 93 LEU LEU A . n A 1 90 VAL 90 94 94 VAL VAL A . n A 1 91 LEU 91 95 95 LEU LEU A . n A 1 92 LEU 92 96 96 LEU LEU A . n A 1 93 ASP 93 97 97 ASP ASP A . n A 1 94 THR 94 98 98 THR THR A . n A 1 95 GLU 95 99 99 GLU GLU A . n A 1 96 GLY 96 100 100 GLY GLY A . n A 1 97 LEU 97 101 101 LEU LEU A . n A 1 98 GLY 98 102 102 GLY GLY A . n A 1 99 ASP 99 103 103 ASP ASP A . n A 1 100 ILE 100 104 104 ILE ILE A . n A 1 101 GLU 101 105 105 GLU GLU A . n A 1 102 LYS 102 106 106 LYS LYS A . n A 1 103 GLY 103 107 107 GLY GLY A . n A 1 104 ASP 104 108 108 ASP ASP A . n A 1 105 ASN 105 109 109 ASN ASN A . n A 1 106 GLU 106 110 110 GLU GLU A . n A 1 107 ASN 107 111 111 ASN ASN A . n A 1 108 ASP 108 112 112 ASP ASP A . n A 1 109 SER 109 113 113 SER SER A . n A 1 110 TRP 110 114 114 TRP TRP A . n A 1 111 ILE 111 115 115 ILE ILE A . n A 1 112 PHE 112 116 116 PHE PHE A . n A 1 113 ALA 113 117 117 ALA ALA A . n A 1 114 LEU 114 118 118 LEU LEU A . n A 1 115 ALA 115 119 119 ALA ALA A . n A 1 116 ILE 116 120 120 ILE ILE A . n A 1 117 LEU 117 121 121 LEU LEU A . n A 1 118 LEU 118 122 122 LEU LEU A . n A 1 119 SER 119 123 123 SER SER A . n A 1 120 SER 120 124 124 SER SER A . n A 1 121 THR 121 125 125 THR THR A . n A 1 122 PHE 122 126 126 PHE PHE A . n A 1 123 VAL 123 127 127 VAL VAL A . n A 1 124 TYR 124 128 128 TYR TYR A . n A 1 125 ASN 125 129 129 ASN ASN A . n A 1 126 SER 126 130 130 SER SER A . n A 1 127 MET 127 131 131 MET MET A . n A 1 128 GLY 128 132 132 GLY GLY A . n A 1 129 THR 129 133 133 THR THR A . n A 1 130 ILE 130 134 134 ILE ILE A . n A 1 131 ASN 131 135 135 ASN ASN A . n A 1 132 GLN 132 136 136 GLN GLN A . n A 1 133 GLN 133 137 137 GLN GLN A . n A 1 134 ALA 134 138 138 ALA ALA A . n A 1 135 MET 135 139 139 MET MET A . n A 1 136 ASP 136 140 140 ASP ASP A . n A 1 137 GLN 137 141 141 GLN GLN A . n A 1 138 LEU 138 142 142 LEU LEU A . n A 1 139 HIS 139 143 143 HIS HIS A . n A 1 140 TYR 140 144 144 TYR TYR A . n A 1 141 VAL 141 145 145 VAL VAL A . n A 1 142 THR 142 146 146 THR THR A . n A 1 143 GLU 143 147 147 GLU GLU A . n A 1 144 LEU 144 148 148 LEU LEU A . n A 1 145 THR 145 149 149 THR THR A . n A 1 146 ASP 146 150 150 ASP ASP A . n A 1 147 ARG 147 151 151 ARG ARG A . n A 1 148 ILE 148 152 152 ILE ILE A . n A 1 149 LYS 149 153 153 LYS LYS A . n A 1 150 ALA 150 154 154 ALA ALA A . n A 1 151 ASN 151 155 155 ASN ASN A . n A 1 152 SER 152 156 156 SER SER A . n A 1 153 SER 153 157 157 SER SER A . n A 1 154 PRO 154 158 158 PRO PRO A . n A 1 155 GLY 155 159 159 GLY GLY A . n A 1 156 ASN 156 160 160 ASN ASN A . n A 1 157 ASN 157 161 161 ASN ASN A . n A 1 158 SER 158 162 162 SER SER A . n A 1 159 VAL 159 163 163 VAL VAL A . n A 1 160 ASP 160 164 164 ASP ASP A . n A 1 161 ASP 161 165 165 ASP ASP A . n A 1 162 SER 162 166 166 SER SER A . n A 1 163 ALA 163 167 167 ALA ALA A . n A 1 164 ASP 164 168 168 ASP ASP A . n A 1 165 PHE 165 169 169 PHE PHE A . n A 1 166 VAL 166 170 170 VAL VAL A . n A 1 167 SER 167 171 171 SER SER A . n A 1 168 PHE 168 172 172 PHE PHE A . n A 1 169 PHE 169 173 173 PHE PHE A . n A 1 170 PRO 170 174 174 PRO PRO A . n A 1 171 ALA 171 175 175 ALA ALA A . n A 1 172 PHE 172 176 176 PHE PHE A . n A 1 173 VAL 173 177 177 VAL VAL A . n A 1 174 TRP 174 178 178 TRP TRP A . n A 1 175 THR 175 179 179 THR THR A . n A 1 176 LEU 176 180 180 LEU LEU A . n A 1 177 ARG 177 181 181 ARG ARG A . n A 1 178 ASP 178 182 182 ASP ASP A . n A 1 179 PHE 179 183 183 PHE PHE A . n A 1 180 THR 180 184 184 THR THR A . n A 1 181 LEU 181 185 185 LEU LEU A . n A 1 182 GLU 182 186 186 GLU GLU A . n A 1 183 LEU 183 187 187 LEU LEU A . n A 1 184 GLU 184 188 188 GLU GLU A . n A 1 185 VAL 185 189 189 VAL VAL A . n A 1 186 ASP 186 190 190 ASP ASP A . n A 1 187 GLY 187 191 191 GLY GLY A . n A 1 188 GLU 188 192 192 GLU GLU A . n A 1 189 PRO 189 193 193 PRO PRO A . n A 1 190 ILE 190 194 194 ILE ILE A . n A 1 191 THR 191 195 195 THR THR A . n A 1 192 ALA 192 196 196 ALA ALA A . n A 1 193 ASP 193 197 197 ASP ASP A . n A 1 194 ASP 194 198 198 ASP ASP A . n A 1 195 TYR 195 199 199 TYR TYR A . n A 1 196 LEU 196 200 200 LEU LEU A . n A 1 197 GLU 197 201 201 GLU GLU A . n A 1 198 LEU 198 202 202 LEU LEU A . n A 1 199 SER 199 203 203 SER SER A . n A 1 200 LEU 200 204 204 LEU LEU A . n A 1 201 LYS 201 205 205 LYS LYS A . n A 1 202 LEU 202 206 206 LEU LEU A . n A 1 203 ARG 203 207 207 ARG ARG A . n A 1 204 LYS 204 208 208 LYS LYS A . n A 1 205 GLY 205 209 209 GLY GLY A . n A 1 206 THR 206 210 210 THR THR A . n A 1 207 ASP 207 211 211 ASP ASP A . n A 1 208 LYS 208 212 212 LYS LYS A . n A 1 209 LYS 209 213 213 LYS LYS A . n A 1 210 SER 210 214 214 SER SER A . n A 1 211 LYS 211 215 215 LYS LYS A . n A 1 212 SER 212 216 216 SER SER A . n A 1 213 PHE 213 217 217 PHE PHE A . n A 1 214 ASN 214 218 218 ASN ASN A . n A 1 215 ASP 215 219 219 ASP ASP A . n A 1 216 PRO 216 220 220 PRO PRO A . n A 1 217 ARG 217 221 221 ARG ARG A . n A 1 218 LEU 218 222 222 LEU LEU A . n A 1 219 CYS 219 223 223 CYS CYS A . n A 1 220 ILE 220 224 224 ILE ILE A . n A 1 221 ARG 221 225 225 ARG ARG A . n A 1 222 LYS 222 226 226 LYS LYS A . n A 1 223 PHE 223 227 227 PHE PHE A . n A 1 224 PHE 224 228 228 PHE PHE A . n A 1 225 PRO 225 229 229 PRO PRO A . n A 1 226 LYS 226 230 230 LYS LYS A . n A 1 227 ARG 227 231 231 ARG ARG A . n A 1 228 LYS 228 232 232 LYS LYS A . n A 1 229 CYS 229 233 233 CYS CYS A . n A 1 230 PHE 230 234 234 PHE PHE A . n A 1 231 VAL 231 235 235 VAL VAL A . n A 1 232 PHE 232 236 236 PHE PHE A . n A 1 233 ASP 233 237 237 ASP ASP A . n A 1 234 TRP 234 238 238 TRP TRP A . n A 1 235 PRO 235 239 239 PRO PRO A . n A 1 236 ALA 236 240 240 ALA ALA A . n A 1 237 PRO 237 241 241 PRO PRO A . n A 1 238 LYS 238 242 242 LYS LYS A . n A 1 239 LYS 239 243 243 LYS LYS A . n A 1 240 TYR 240 244 244 TYR TYR A . n A 1 241 LEU 241 245 245 LEU LEU A . n A 1 242 ALA 242 246 246 ALA ALA A . n A 1 243 HIS 243 247 247 HIS HIS A . n A 1 244 LEU 244 248 248 LEU LEU A . n A 1 245 GLU 245 249 249 GLU GLU A . n A 1 246 GLN 246 250 250 GLN GLN A . n A 1 247 LEU 247 251 251 LEU LEU A . n A 1 248 LYS 248 252 252 LYS LYS A . n A 1 249 GLU 249 253 253 GLU GLU A . n A 1 250 GLU 250 254 254 GLU GLU A . n A 1 251 GLU 251 255 255 GLU GLU A . n A 1 252 LEU 252 256 256 LEU LEU A . n A 1 253 ASN 253 257 257 ASN ASN A . n A 1 254 PRO 254 258 258 PRO PRO A . n A 1 255 ASP 255 259 259 ASP ASP A . n A 1 256 PHE 256 260 260 PHE PHE A . n A 1 257 ILE 257 261 261 ILE ILE A . n A 1 258 GLU 258 262 262 GLU GLU A . n A 1 259 GLN 259 263 263 GLN GLN A . n A 1 260 VAL 260 264 264 VAL VAL A . n A 1 261 ALA 261 265 265 ALA ALA A . n A 1 262 GLU 262 266 266 GLU GLU A . n A 1 263 PHE 263 267 267 PHE PHE A . n A 1 264 CYS 264 268 268 CYS CYS A . n A 1 265 SER 265 269 269 SER SER A . n A 1 266 TYR 266 270 270 TYR TYR A . n A 1 267 ILE 267 271 271 ILE ILE A . n A 1 268 LEU 268 272 272 LEU LEU A . n A 1 269 SER 269 273 273 SER SER A . n A 1 270 HIS 270 274 274 HIS HIS A . n A 1 271 SER 271 275 275 SER SER A . n A 1 272 ASN 272 276 276 ASN ASN A . n A 1 273 VAL 273 277 277 VAL VAL A . n A 1 274 LYS 274 278 278 LYS LYS A . n A 1 275 THR 275 279 279 THR THR A . n A 1 276 LEU 276 280 280 LEU LEU A . n A 1 277 SER 277 281 281 SER SER A . n A 1 278 GLY 278 282 282 GLY GLY A . n A 1 279 GLY 279 283 283 GLY GLY A . n A 1 280 ILE 280 284 284 ILE ILE A . n A 1 281 PRO 281 285 285 PRO PRO A . n A 1 282 VAL 282 286 286 VAL VAL A . n A 1 283 ASN 283 287 287 ASN ASN A . n A 1 284 GLY 284 288 288 GLY GLY A . n A 1 285 PRO 285 289 289 PRO PRO A . n A 1 286 ARG 286 290 290 ARG ARG A . n A 1 287 LEU 287 291 291 LEU LEU A . n A 1 288 GLU 288 292 292 GLU GLU A . n A 1 289 SER 289 293 293 SER SER A . n A 1 290 LEU 290 294 294 LEU LEU A . n A 1 291 VAL 291 295 295 VAL VAL A . n A 1 292 LEU 292 296 296 LEU LEU A . n A 1 293 THR 293 297 297 THR THR A . n A 1 294 TYR 294 298 298 TYR TYR A . n A 1 295 VAL 295 299 299 VAL VAL A . n A 1 296 ASN 296 300 300 ASN ASN A . n A 1 297 ALA 297 301 301 ALA ALA A . n A 1 298 ILE 298 302 302 ILE ILE A . n A 1 299 SER 299 303 303 SER SER A . n A 1 300 SER 300 304 304 SER SER A . n A 1 301 GLY 301 305 305 GLY GLY A . n A 1 302 ASP 302 306 306 ASP ASP A . n A 1 303 LEU 303 307 307 LEU LEU A . n A 1 304 PRO 304 308 308 PRO PRO A . n A 1 305 CYS 305 309 309 CYS CYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 401 1 GDP GDP A . C 3 HOH 1 501 49 HOH HOH A . C 3 HOH 2 502 54 HOH HOH A . C 3 HOH 3 503 60 HOH HOH A . C 3 HOH 4 504 18 HOH HOH A . C 3 HOH 5 505 25 HOH HOH A . C 3 HOH 6 506 31 HOH HOH A . C 3 HOH 7 507 73 HOH HOH A . C 3 HOH 8 508 50 HOH HOH A . C 3 HOH 9 509 40 HOH HOH A . C 3 HOH 10 510 7 HOH HOH A . C 3 HOH 11 511 3 HOH HOH A . C 3 HOH 12 512 83 HOH HOH A . C 3 HOH 13 513 6 HOH HOH A . C 3 HOH 14 514 2 HOH HOH A . C 3 HOH 15 515 105 HOH HOH A . C 3 HOH 16 516 43 HOH HOH A . C 3 HOH 17 517 80 HOH HOH A . C 3 HOH 18 518 4 HOH HOH A . C 3 HOH 19 519 20 HOH HOH A . C 3 HOH 20 520 16 HOH HOH A . C 3 HOH 21 521 17 HOH HOH A . C 3 HOH 22 522 52 HOH HOH A . C 3 HOH 23 523 110 HOH HOH A . C 3 HOH 24 524 14 HOH HOH A . C 3 HOH 25 525 61 HOH HOH A . C 3 HOH 26 526 44 HOH HOH A . C 3 HOH 27 527 33 HOH HOH A . C 3 HOH 28 528 28 HOH HOH A . C 3 HOH 29 529 92 HOH HOH A . C 3 HOH 30 530 8 HOH HOH A . C 3 HOH 31 531 35 HOH HOH A . C 3 HOH 32 532 112 HOH HOH A . C 3 HOH 33 533 55 HOH HOH A . C 3 HOH 34 534 76 HOH HOH A . C 3 HOH 35 535 5 HOH HOH A . C 3 HOH 36 536 51 HOH HOH A . C 3 HOH 37 537 1 HOH HOH A . C 3 HOH 38 538 19 HOH HOH A . C 3 HOH 39 539 24 HOH HOH A . C 3 HOH 40 540 15 HOH HOH A . C 3 HOH 41 541 108 HOH HOH A . C 3 HOH 42 542 100 HOH HOH A . C 3 HOH 43 543 48 HOH HOH A . C 3 HOH 44 544 104 HOH HOH A . C 3 HOH 45 545 13 HOH HOH A . C 3 HOH 46 546 26 HOH HOH A . C 3 HOH 47 547 90 HOH HOH A . C 3 HOH 48 548 22 HOH HOH A . C 3 HOH 49 549 125 HOH HOH A . C 3 HOH 50 550 21 HOH HOH A . C 3 HOH 51 551 106 HOH HOH A . C 3 HOH 52 552 79 HOH HOH A . C 3 HOH 53 553 29 HOH HOH A . C 3 HOH 54 554 87 HOH HOH A . C 3 HOH 55 555 34 HOH HOH A . C 3 HOH 56 556 101 HOH HOH A . C 3 HOH 57 557 124 HOH HOH A . C 3 HOH 58 558 9 HOH HOH A . C 3 HOH 59 559 32 HOH HOH A . C 3 HOH 60 560 47 HOH HOH A . C 3 HOH 61 561 45 HOH HOH A . C 3 HOH 62 562 36 HOH HOH A . C 3 HOH 63 563 63 HOH HOH A . C 3 HOH 64 564 10 HOH HOH A . C 3 HOH 65 565 39 HOH HOH A . C 3 HOH 66 566 72 HOH HOH A . C 3 HOH 67 567 69 HOH HOH A . C 3 HOH 68 568 98 HOH HOH A . C 3 HOH 69 569 11 HOH HOH A . C 3 HOH 70 570 123 HOH HOH A . C 3 HOH 71 571 42 HOH HOH A . C 3 HOH 72 572 57 HOH HOH A . C 3 HOH 73 573 81 HOH HOH A . C 3 HOH 74 574 70 HOH HOH A . C 3 HOH 75 575 12 HOH HOH A . C 3 HOH 76 576 115 HOH HOH A . C 3 HOH 77 577 65 HOH HOH A . C 3 HOH 78 578 75 HOH HOH A . C 3 HOH 79 579 23 HOH HOH A . C 3 HOH 80 580 111 HOH HOH A . C 3 HOH 81 581 86 HOH HOH A . C 3 HOH 82 582 85 HOH HOH A . C 3 HOH 83 583 97 HOH HOH A . C 3 HOH 84 584 113 HOH HOH A . C 3 HOH 85 585 27 HOH HOH A . C 3 HOH 86 586 53 HOH HOH A . C 3 HOH 87 587 62 HOH HOH A . C 3 HOH 88 588 68 HOH HOH A . C 3 HOH 89 589 41 HOH HOH A . C 3 HOH 90 590 59 HOH HOH A . C 3 HOH 91 591 30 HOH HOH A . C 3 HOH 92 592 71 HOH HOH A . C 3 HOH 93 593 118 HOH HOH A . C 3 HOH 94 594 37 HOH HOH A . C 3 HOH 95 595 56 HOH HOH A . C 3 HOH 96 596 103 HOH HOH A . C 3 HOH 97 597 74 HOH HOH A . C 3 HOH 98 598 95 HOH HOH A . C 3 HOH 99 599 130 HOH HOH A . C 3 HOH 100 600 107 HOH HOH A . C 3 HOH 101 601 131 HOH HOH A . C 3 HOH 102 602 46 HOH HOH A . C 3 HOH 103 603 91 HOH HOH A . C 3 HOH 104 604 128 HOH HOH A . C 3 HOH 105 605 67 HOH HOH A . C 3 HOH 106 606 94 HOH HOH A . C 3 HOH 107 607 127 HOH HOH A . C 3 HOH 108 608 77 HOH HOH A . C 3 HOH 109 609 38 HOH HOH A . C 3 HOH 110 610 99 HOH HOH A . C 3 HOH 111 611 96 HOH HOH A . C 3 HOH 112 612 102 HOH HOH A . C 3 HOH 113 613 89 HOH HOH A . C 3 HOH 114 614 84 HOH HOH A . C 3 HOH 115 615 78 HOH HOH A . C 3 HOH 116 616 117 HOH HOH A . C 3 HOH 117 617 129 HOH HOH A . C 3 HOH 118 618 116 HOH HOH A . C 3 HOH 119 619 119 HOH HOH A . C 3 HOH 120 620 114 HOH HOH A . C 3 HOH 121 621 121 HOH HOH A . C 3 HOH 122 622 82 HOH HOH A . C 3 HOH 123 623 64 HOH HOH A . C 3 HOH 124 624 122 HOH HOH A . C 3 HOH 125 625 93 HOH HOH A . C 3 HOH 126 626 66 HOH HOH A . C 3 HOH 127 627 88 HOH HOH A . C 3 HOH 128 628 58 HOH HOH A . C 3 HOH 129 629 126 HOH HOH A . C 3 HOH 130 630 109 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-01-27 2 'Structure model' 1 1 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.6339 _pdbx_refine_tls.origin_y 29.8233 _pdbx_refine_tls.origin_z -18.5552 _pdbx_refine_tls.T[1][1] 0.2061 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0304 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0400 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.2731 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0184 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.2033 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 3.3815 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.5454 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.0511 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 2.0246 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.0697 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 2.3553 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.0250 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0340 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.1043 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0947 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0079 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0397 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.1748 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0760 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0247 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 5 ? ? A 309 ? all 2 'X-RAY DIFFRACTION' 1 ? ? C 1 ? ? C 1 ? all 3 'X-RAY DIFFRACTION' 1 ? ? D 1 ? ? D 131 ? all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16_3549 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 6VKJ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CE A LYS 232 ? ? CZ A PHE 234 ? ? 1.91 2 1 NZ A LYS 232 ? ? CG A TYR 270 ? ? 1.92 3 1 NZ A LYS 232 ? ? CZ A PHE 234 ? ? 1.98 4 1 CG A LEU 93 ? ? O A HOH 552 ? ? 2.01 5 1 O A PHE 217 ? ? O A HOH 501 ? ? 2.02 6 1 NH1 A ARG 221 ? ? O A HOH 501 ? ? 2.02 7 1 NZ A LYS 76 ? ? O A HOH 502 ? ? 2.02 8 1 CD1 A ILE 5 ? ? O A HOH 582 ? ? 2.13 9 1 CB A THR 125 ? ? O A HOH 506 ? ? 2.16 10 1 CB A LEU 294 ? ? O A HOH 566 ? ? 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 211 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 211 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 211 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.17 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation 17.17 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 18 ? ? -105.19 62.12 2 1 SER A 66 ? ? -140.74 49.05 3 1 THR A 210 ? ? -39.84 133.15 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R00AI108793 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GDP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GDP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2B92 _pdbx_initial_refinement_model.details 2B92:A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #