data_6VLH # _entry.id 6VLH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.337 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6VLH WWPDB D_1000246621 # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 6VKA _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VLH _pdbx_database_status.recvd_initial_deposition_date 2020-01-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gorman, M.A.' 1 0000-0003-3438-8245 'Parker, M.W.' 2 0000-0002-3101-1138 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'HIV Integrase core domain (IN) in complex with dimeric spanning inhibitor' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Scanlon, M.' 1 0000-0002-9230-7506 primary 'Gorman, M.A.' 2 0000-0003-3438-8245 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6VLH _cell.details ? _cell.formula_units_Z ? _cell.length_a 46.306 _cell.length_a_esd ? _cell.length_b 46.306 _cell.length_b_esd ? _cell.length_c 139.148 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VLH _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Integrase 17872.305 2 2.7.7.49 Q53E,C56S,G124S,A125T,W131E,V151I,F185K,Q209E 'core domain (UNP residues 50-211)' ? 2 non-polymer man 'IODIDE ION' 126.904 6 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 9 ? ? ? ? 4 non-polymer syn ;(2-{[3-(4-{2-[(3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}benzene-1-carbonyl)amino]ethyl}piperazine-1-carbonyl)phenyl]ethynyl}-5-methyl-1-benzofuran-3-yl)acetic acid ; 761.817 1 ? ? ? ? 5 water nat water 18.015 54 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSMHGEVDSSPGIWQLD(CSO)THLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTS TTVKAACEWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDI IATDIETK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMHGEVDSSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVK AACEWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATD IETK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 HIS n 1 5 GLY n 1 6 GLU n 1 7 VAL n 1 8 ASP n 1 9 SER n 1 10 SER n 1 11 PRO n 1 12 GLY n 1 13 ILE n 1 14 TRP n 1 15 GLN n 1 16 LEU n 1 17 ASP n 1 18 CSO n 1 19 THR n 1 20 HIS n 1 21 LEU n 1 22 GLU n 1 23 GLY n 1 24 LYS n 1 25 VAL n 1 26 ILE n 1 27 LEU n 1 28 VAL n 1 29 ALA n 1 30 VAL n 1 31 HIS n 1 32 VAL n 1 33 ALA n 1 34 SER n 1 35 GLY n 1 36 TYR n 1 37 ILE n 1 38 GLU n 1 39 ALA n 1 40 GLU n 1 41 VAL n 1 42 ILE n 1 43 PRO n 1 44 ALA n 1 45 GLU n 1 46 THR n 1 47 GLY n 1 48 GLN n 1 49 GLU n 1 50 THR n 1 51 ALA n 1 52 TYR n 1 53 PHE n 1 54 LEU n 1 55 LEU n 1 56 LYS n 1 57 LEU n 1 58 ALA n 1 59 GLY n 1 60 ARG n 1 61 TRP n 1 62 PRO n 1 63 VAL n 1 64 LYS n 1 65 THR n 1 66 VAL n 1 67 HIS n 1 68 THR n 1 69 ASP n 1 70 ASN n 1 71 GLY n 1 72 SER n 1 73 ASN n 1 74 PHE n 1 75 THR n 1 76 SER n 1 77 THR n 1 78 THR n 1 79 VAL n 1 80 LYS n 1 81 ALA n 1 82 ALA n 1 83 CYS n 1 84 GLU n 1 85 TRP n 1 86 ALA n 1 87 GLY n 1 88 ILE n 1 89 LYS n 1 90 GLN n 1 91 GLU n 1 92 PHE n 1 93 GLY n 1 94 ILE n 1 95 PRO n 1 96 TYR n 1 97 ASN n 1 98 PRO n 1 99 GLN n 1 100 SER n 1 101 GLN n 1 102 GLY n 1 103 VAL n 1 104 ILE n 1 105 GLU n 1 106 SER n 1 107 MET n 1 108 ASN n 1 109 LYS n 1 110 GLU n 1 111 LEU n 1 112 LYS n 1 113 LYS n 1 114 ILE n 1 115 ILE n 1 116 GLY n 1 117 GLN n 1 118 VAL n 1 119 ARG n 1 120 ASP n 1 121 GLN n 1 122 ALA n 1 123 GLU n 1 124 HIS n 1 125 LEU n 1 126 LYS n 1 127 THR n 1 128 ALA n 1 129 VAL n 1 130 GLN n 1 131 MET n 1 132 ALA n 1 133 VAL n 1 134 PHE n 1 135 ILE n 1 136 HIS n 1 137 ASN n 1 138 LYS n 1 139 LYS n 1 140 ARG n 1 141 LYS n 1 142 GLY n 1 143 GLY n 1 144 ILE n 1 145 GLY n 1 146 GLY n 1 147 TYR n 1 148 SER n 1 149 ALA n 1 150 GLY n 1 151 GLU n 1 152 ARG n 1 153 ILE n 1 154 VAL n 1 155 ASP n 1 156 ILE n 1 157 ILE n 1 158 ALA n 1 159 THR n 1 160 ASP n 1 161 ILE n 1 162 GLU n 1 163 THR n 1 164 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 164 _entity_src_gen.gene_src_common_name HIV-1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code F2WR39_9HIV1 _struct_ref.pdbx_db_accession F2WR39 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA CWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQ TK ; _struct_ref.pdbx_align_begin 50 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6VLH A 3 ? 164 ? F2WR39 50 ? 211 ? 50 211 2 1 6VLH B 3 ? 164 ? F2WR39 50 ? 211 ? 50 211 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6VLH GLY A 1 ? UNP F2WR39 ? ? 'expression tag' 48 1 1 6VLH SER A 2 ? UNP F2WR39 ? ? 'expression tag' 49 2 1 6VLH GLU A 6 ? UNP F2WR39 GLN 53 'engineered mutation' 53 3 1 6VLH SER A 9 ? UNP F2WR39 CYS 56 'engineered mutation' 56 4 1 6VLH GLU A 84 ? UNP F2WR39 TRP 131 'engineered mutation' 131 5 1 6VLH LYS A 138 ? UNP F2WR39 PHE 185 'engineered mutation' 185 6 1 6VLH GLU A 162 ? UNP F2WR39 GLN 209 'engineered mutation' 209 7 2 6VLH GLY B 1 ? UNP F2WR39 ? ? 'expression tag' 48 8 2 6VLH SER B 2 ? UNP F2WR39 ? ? 'expression tag' 49 9 2 6VLH GLU B 6 ? UNP F2WR39 GLN 53 'engineered mutation' 53 10 2 6VLH SER B 9 ? UNP F2WR39 CYS 56 'engineered mutation' 56 11 2 6VLH GLU B 84 ? UNP F2WR39 TRP 131 'engineered mutation' 131 12 2 6VLH LYS B 138 ? UNP F2WR39 PHE 185 'engineered mutation' 185 13 2 6VLH GLU B 162 ? UNP F2WR39 GLN 209 'engineered mutation' 209 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 R2A non-polymer . ;(2-{[3-(4-{2-[(3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}benzene-1-carbonyl)amino]ethyl}piperazine-1-carbonyl)phenyl]ethynyl}-5-methyl-1-benzofuran-3-yl)acetic acid ; ? 'C46 H39 N3 O8' 761.817 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VLH _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.8 M ammonium sulfate, 100 mM potassium iodide' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-08-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.96 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate 32.3 _reflns.entry_id 6VLH _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.036 _reflns.d_resolution_low 46.38 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18621 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.0 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.06 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.059 _reflns.pdbx_Rpim_I_all 0.021 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.036 _reflns_shell.d_res_low 2.09 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 5.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1287 _reflns_shell.percent_possible_all 93.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.438 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.20 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.472 _reflns_shell.pdbx_Rpim_I_all 0.172 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VLH _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.036 _refine.ls_d_res_low 46.306 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18621 _refine.ls_number_reflns_R_free 3644 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.82 _refine.ls_percent_reflns_R_free 9.96 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2226 _refine.ls_R_factor_R_free 0.2981 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2095 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 8.54 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 37.22 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.036 _refine_hist.d_res_low 46.306 _refine_hist.number_atoms_solvent 54 _refine_hist.number_atoms_total 2261 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2099 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 108 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 ? 2239 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.533 ? 3030 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 18.911 ? 1278 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.055 ? 334 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 367 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0387 2.0738 . . 167 1561 86.00 . . . 0.3073 . 0.3128 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0738 2.1115 . . 180 1735 91.00 . . . 0.3838 . 0.3141 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1115 2.1521 . . 176 1604 90.00 . . . 0.4009 . 0.3087 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1521 2.1961 . . 196 1709 90.00 . . . 0.3651 . 0.3232 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1961 2.2438 . . 172 1519 87.00 . . . 0.6430 . 0.4580 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2438 2.2960 . . 171 1628 86.00 . . . 0.6172 . 0.4799 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2960 2.3534 . . 186 1654 90.00 . . . 0.4743 . 0.2985 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3534 2.4170 . . 194 1666 90.00 . . . 0.3297 . 0.2862 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4170 2.4881 . . 170 1639 91.00 . . . 0.3082 . 0.2723 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4881 2.5684 . . 186 1693 90.00 . . . 0.3553 . 0.2696 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5684 2.6602 . . 186 1639 90.00 . . . 0.3250 . 0.2700 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6602 2.7667 . . 179 1655 90.00 . . . 0.2952 . 0.2601 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7667 2.8926 . . 186 1702 90.00 . . . 0.3080 . 0.2257 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8926 3.0450 . . 182 1639 90.00 . . . 0.2251 . 0.2021 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0450 3.2357 . . 188 1649 90.00 . . . 0.3585 . 0.1987 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2357 3.4854 . . 181 1661 90.00 . . . 0.2172 . 0.1830 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4854 3.8359 . . 191 1662 89.00 . . . 0.2764 . 0.1470 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8359 4.3902 . . 177 1635 90.00 . . . 0.1982 . 0.1298 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.3902 5.5286 . . 191 1648 90.00 . . . 0.2287 . 0.1288 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.5286 38.5554 . . 171 1624 88.00 . . . 0.2820 . 0.1977 . . . . . . . . . . . # _struct.entry_id 6VLH _struct.title 'HIV Integrase Core domain (IN) in complex with dimer-spanning ligand' _struct.pdbx_descriptor Integrase _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VLH _struct_keywords.text 'Virus, Inhibitor, Complex, HIV Integrase, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 2 ? L N N 2 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 4 ? S N N 5 ? T N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 48 ? TRP A 61 ? GLN A 95 TRP A 108 1 ? 14 HELX_P HELX_P2 AA2 GLY A 71 ? THR A 75 ? GLY A 118 THR A 122 5 ? 5 HELX_P HELX_P3 AA3 SER A 76 ? GLY A 87 ? SER A 123 GLY A 134 1 ? 12 HELX_P HELX_P4 AA4 MET A 107 ? ARG A 119 ? MET A 154 ARG A 166 1 ? 13 HELX_P HELX_P5 AA5 ASP A 120 ? ALA A 122 ? ASP A 167 ALA A 169 5 ? 3 HELX_P HELX_P6 AA6 HIS A 124 ? LYS A 139 ? HIS A 171 LYS A 186 1 ? 16 HELX_P HELX_P7 AA7 SER A 148 ? ASP A 160 ? SER A 195 ASP A 207 1 ? 13 HELX_P HELX_P8 AA8 GLY B 47 ? TRP B 61 ? GLY B 94 TRP B 108 1 ? 15 HELX_P HELX_P9 AA9 GLY B 71 ? THR B 75 ? GLY B 118 THR B 122 5 ? 5 HELX_P HELX_P10 AB1 SER B 76 ? GLY B 87 ? SER B 123 GLY B 134 1 ? 12 HELX_P HELX_P11 AB2 LYS B 109 ? ASP B 120 ? LYS B 156 ASP B 167 1 ? 12 HELX_P HELX_P12 AB3 HIS B 124 ? LYS B 139 ? HIS B 171 LYS B 186 1 ? 16 HELX_P HELX_P13 AB4 SER B 148 ? ILE B 161 ? SER B 195 ILE B 208 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 17 C ? ? ? 1_555 A CSO 18 N ? ? A ASP 64 A CSO 65 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A CSO 18 C ? ? ? 1_555 A THR 19 N ? ? A CSO 65 A THR 66 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale3 covale both ? B ASP 17 C ? ? ? 1_555 B CSO 18 N ? ? B ASP 64 B CSO 65 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? B CSO 18 C ? ? ? 1_555 B THR 19 N ? ? B CSO 65 B THR 66 1_555 ? ? ? ? ? ? ? 1.315 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 37 ? ILE A 42 ? ILE A 84 ILE A 89 AA1 2 VAL A 25 ? HIS A 31 ? VAL A 72 HIS A 78 AA1 3 ILE A 13 ? HIS A 20 ? ILE A 60 HIS A 67 AA1 4 THR A 65 ? THR A 68 ? THR A 112 THR A 115 AA1 5 LYS A 89 ? PHE A 92 ? LYS A 136 PHE A 139 AA2 1 ILE B 37 ? ILE B 42 ? ILE B 84 ILE B 89 AA2 2 LYS B 24 ? HIS B 31 ? LYS B 71 HIS B 78 AA2 3 ILE B 13 ? LEU B 21 ? ILE B 60 LEU B 68 AA2 4 THR B 65 ? THR B 68 ? THR B 112 THR B 115 AA2 5 LYS B 89 ? PHE B 92 ? LYS B 136 PHE B 139 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 40 ? O GLU A 87 N LEU A 27 ? N LEU A 74 AA1 2 3 O VAL A 30 ? O VAL A 77 N GLN A 15 ? N GLN A 62 AA1 3 4 N LEU A 16 ? N LEU A 63 O HIS A 67 ? O HIS A 114 AA1 4 5 N VAL A 66 ? N VAL A 113 O LYS A 89 ? O LYS A 136 AA2 1 2 O GLU B 40 ? O GLU B 87 N LEU B 27 ? N LEU B 74 AA2 2 3 O ILE B 26 ? O ILE B 73 N THR B 19 ? N THR B 66 AA2 3 4 N LEU B 16 ? N LEU B 63 O HIS B 67 ? O HIS B 114 AA2 4 5 N VAL B 66 ? N VAL B 113 O LYS B 89 ? O LYS B 136 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IOD 301 ? 2 'binding site for residue IOD A 301' AC2 Software A IOD 302 ? 2 'binding site for residue IOD A 302' AC3 Software A IOD 303 ? 2 'binding site for residue IOD A 303' AC4 Software A SO4 305 ? 3 'binding site for residue SO4 A 305' AC5 Software A SO4 306 ? 3 'binding site for residue SO4 A 306' AC6 Software A SO4 307 ? 4 'binding site for residue SO4 A 307' AC7 Software A SO4 308 ? 6 'binding site for residue SO4 A 308' AC8 Software B IOD 301 ? 1 'binding site for residue IOD B 301' AC9 Software B IOD 302 ? 3 'binding site for residue IOD B 302' AD1 Software B SO4 303 ? 4 'binding site for residue SO4 B 303' AD2 Software B SO4 304 ? 4 'binding site for residue SO4 B 304' AD3 Software B SO4 305 ? 6 'binding site for residue SO4 B 305' AD4 Software B SO4 306 ? 4 'binding site for residue SO4 B 306' AD5 Software B SO4 307 ? 3 'binding site for residue SO4 B 307' AD6 Software B R2A 308 ? 23 'binding site for residue R2A B 308' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 LYS A 24 ? LYS A 71 . ? 1_555 ? 2 AC1 2 LYS A 126 ? LYS A 173 . ? 1_555 ? 3 AC2 2 HIS A 20 ? HIS A 67 . ? 1_555 ? 4 AC2 2 GLY A 23 ? GLY A 70 . ? 1_555 ? 5 AC3 2 PHE A 74 ? PHE A 121 . ? 3_654 ? 6 AC3 2 ARG A 140 ? ARG A 187 . ? 1_555 ? 7 AC4 3 THR A 19 ? THR A 66 . ? 1_555 ? 8 AC4 3 HIS A 20 ? HIS A 67 . ? 1_555 ? 9 AC4 3 LYS A 112 ? LYS A 159 . ? 1_555 ? 10 AC5 3 ASP A 69 ? ASP A 116 . ? 1_555 ? 11 AC5 3 ASN A 70 ? ASN A 117 . ? 1_555 ? 12 AC5 3 GLU B 84 ? GLU B 131 . ? 4_565 ? 13 AC6 4 SER A 76 ? SER A 123 . ? 1_555 ? 14 AC6 4 THR A 77 ? THR A 124 . ? 1_555 ? 15 AC6 4 THR A 78 ? THR A 125 . ? 1_555 ? 16 AC6 4 LYS B 64 ? LYS B 111 . ? 4_565 ? 17 AC7 6 PRO A 62 ? PRO A 109 . ? 1_555 ? 18 AC7 6 HOH S . ? HOH A 405 . ? 1_555 ? 19 AC7 6 HOH S . ? HOH A 406 . ? 1_555 ? 20 AC7 6 THR B 75 ? THR B 122 . ? 4_555 ? 21 AC7 6 LYS B 80 ? LYS B 127 . ? 4_555 ? 22 AC7 6 LYS B 138 ? LYS B 185 . ? 1_555 ? 23 AC8 1 LYS B 126 ? LYS B 173 . ? 1_555 ? 24 AC9 3 ARG A 152 ? ARG A 199 . ? 1_455 ? 25 AC9 3 HOH S . ? HOH A 421 . ? 1_455 ? 26 AC9 3 GLY B 23 ? GLY B 70 . ? 1_555 ? 27 AD1 4 TYR A 147 ? TYR A 194 . ? 1_455 ? 28 AD1 4 THR B 19 ? THR B 66 . ? 1_555 ? 29 AD1 4 HIS B 20 ? HIS B 67 . ? 1_555 ? 30 AD1 4 LYS B 112 ? LYS B 159 . ? 1_555 ? 31 AD2 4 LYS B 112 ? LYS B 159 . ? 1_555 ? 32 AD2 4 ILE B 115 ? ILE B 162 . ? 1_555 ? 33 AD2 4 GLY B 116 ? GLY B 163 . ? 1_555 ? 34 AD2 4 ARG B 119 ? ARG B 166 . ? 1_555 ? 35 AD3 6 SER B 10 ? SER B 57 . ? 1_555 ? 36 AD3 6 PRO B 11 ? PRO B 58 . ? 1_555 ? 37 AD3 6 GLY B 12 ? GLY B 59 . ? 1_555 ? 38 AD3 6 ILE B 13 ? ILE B 60 . ? 1_555 ? 39 AD3 6 LYS B 64 ? LYS B 111 . ? 1_555 ? 40 AD3 6 HOH T . ? HOH B 423 . ? 1_555 ? 41 AD4 4 SER B 76 ? SER B 123 . ? 1_555 ? 42 AD4 4 THR B 77 ? THR B 124 . ? 1_555 ? 43 AD4 4 THR B 78 ? THR B 125 . ? 1_555 ? 44 AD4 4 HOH T . ? HOH B 409 . ? 1_555 ? 45 AD5 3 ILE B 13 ? ILE B 60 . ? 1_555 ? 46 AD5 3 GLN B 15 ? GLN B 62 . ? 1_555 ? 47 AD5 3 HIS B 67 ? HIS B 114 . ? 1_555 ? 48 AD6 23 GLU A 40 ? GLU A 87 . ? 1_555 ? 49 AD6 23 GLN A 48 ? GLN A 95 . ? 1_555 ? 50 AD6 23 GLU A 49 ? GLU A 96 . ? 1_555 ? 51 AD6 23 ALA A 51 ? ALA A 98 . ? 1_555 ? 52 AD6 23 THR A 78 ? THR A 125 . ? 1_555 ? 53 AD6 23 ALA A 81 ? ALA A 128 . ? 1_555 ? 54 AD6 23 ALA A 82 ? ALA A 129 . ? 1_555 ? 55 AD6 23 ALA A 122 ? ALA A 169 . ? 1_555 ? 56 AD6 23 GLU A 123 ? GLU A 170 . ? 1_555 ? 57 AD6 23 HIS A 124 ? HIS A 171 . ? 1_555 ? 58 AD6 23 LYS A 126 ? LYS A 173 . ? 1_555 ? 59 AD6 23 THR A 127 ? THR A 174 . ? 1_555 ? 60 AD6 23 MET A 131 ? MET A 178 . ? 1_555 ? 61 AD6 23 GLN B 48 ? GLN B 95 . ? 1_555 ? 62 AD6 23 GLU B 49 ? GLU B 96 . ? 1_555 ? 63 AD6 23 TYR B 52 ? TYR B 99 . ? 1_555 ? 64 AD6 23 LEU B 55 ? LEU B 102 . ? 1_555 ? 65 AD6 23 THR B 78 ? THR B 125 . ? 1_555 ? 66 AD6 23 ALA B 82 ? ALA B 129 . ? 1_555 ? 67 AD6 23 ALA B 122 ? ALA B 169 . ? 1_555 ? 68 AD6 23 GLU B 123 ? GLU B 170 . ? 1_555 ? 69 AD6 23 HIS B 124 ? HIS B 171 . ? 1_555 ? 70 AD6 23 THR B 127 ? THR B 174 . ? 1_555 ? # _atom_sites.entry_id 6VLH _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.021595 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021595 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007187 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 48 ? ? ? A . n A 1 2 SER 2 49 ? ? ? A . n A 1 3 MET 3 50 ? ? ? A . n A 1 4 HIS 4 51 ? ? ? A . n A 1 5 GLY 5 52 ? ? ? A . n A 1 6 GLU 6 53 ? ? ? A . n A 1 7 VAL 7 54 ? ? ? A . n A 1 8 ASP 8 55 ? ? ? A . n A 1 9 SER 9 56 56 SER SER A . n A 1 10 SER 10 57 57 SER SER A . n A 1 11 PRO 11 58 58 PRO PRO A . n A 1 12 GLY 12 59 59 GLY GLY A . n A 1 13 ILE 13 60 60 ILE ILE A . n A 1 14 TRP 14 61 61 TRP TRP A . n A 1 15 GLN 15 62 62 GLN GLN A . n A 1 16 LEU 16 63 63 LEU LEU A . n A 1 17 ASP 17 64 64 ASP ASP A . n A 1 18 CSO 18 65 65 CSO CSO A . n A 1 19 THR 19 66 66 THR THR A . n A 1 20 HIS 20 67 67 HIS HIS A . n A 1 21 LEU 21 68 68 LEU LEU A . n A 1 22 GLU 22 69 69 GLU GLU A . n A 1 23 GLY 23 70 70 GLY GLY A . n A 1 24 LYS 24 71 71 LYS LYS A . n A 1 25 VAL 25 72 72 VAL VAL A . n A 1 26 ILE 26 73 73 ILE ILE A . n A 1 27 LEU 27 74 74 LEU LEU A . n A 1 28 VAL 28 75 75 VAL VAL A . n A 1 29 ALA 29 76 76 ALA ALA A . n A 1 30 VAL 30 77 77 VAL VAL A . n A 1 31 HIS 31 78 78 HIS HIS A . n A 1 32 VAL 32 79 79 VAL VAL A . n A 1 33 ALA 33 80 80 ALA ALA A . n A 1 34 SER 34 81 81 SER SER A . n A 1 35 GLY 35 82 82 GLY GLY A . n A 1 36 TYR 36 83 83 TYR TYR A . n A 1 37 ILE 37 84 84 ILE ILE A . n A 1 38 GLU 38 85 85 GLU GLU A . n A 1 39 ALA 39 86 86 ALA ALA A . n A 1 40 GLU 40 87 87 GLU GLU A . n A 1 41 VAL 41 88 88 VAL VAL A . n A 1 42 ILE 42 89 89 ILE ILE A . n A 1 43 PRO 43 90 90 PRO PRO A . n A 1 44 ALA 44 91 91 ALA ALA A . n A 1 45 GLU 45 92 ? ? ? A . n A 1 46 THR 46 93 ? ? ? A . n A 1 47 GLY 47 94 94 GLY GLY A . n A 1 48 GLN 48 95 95 GLN GLN A . n A 1 49 GLU 49 96 96 GLU GLU A . n A 1 50 THR 50 97 97 THR THR A . n A 1 51 ALA 51 98 98 ALA ALA A . n A 1 52 TYR 52 99 99 TYR TYR A . n A 1 53 PHE 53 100 100 PHE PHE A . n A 1 54 LEU 54 101 101 LEU LEU A . n A 1 55 LEU 55 102 102 LEU LEU A . n A 1 56 LYS 56 103 103 LYS LYS A . n A 1 57 LEU 57 104 104 LEU LEU A . n A 1 58 ALA 58 105 105 ALA ALA A . n A 1 59 GLY 59 106 106 GLY GLY A . n A 1 60 ARG 60 107 107 ARG ARG A . n A 1 61 TRP 61 108 108 TRP TRP A . n A 1 62 PRO 62 109 109 PRO PRO A . n A 1 63 VAL 63 110 110 VAL VAL A . n A 1 64 LYS 64 111 111 LYS LYS A . n A 1 65 THR 65 112 112 THR THR A . n A 1 66 VAL 66 113 113 VAL VAL A . n A 1 67 HIS 67 114 114 HIS HIS A . n A 1 68 THR 68 115 115 THR THR A . n A 1 69 ASP 69 116 116 ASP ASP A . n A 1 70 ASN 70 117 117 ASN ASN A . n A 1 71 GLY 71 118 118 GLY GLY A . n A 1 72 SER 72 119 119 SER SER A . n A 1 73 ASN 73 120 120 ASN ASN A . n A 1 74 PHE 74 121 121 PHE PHE A . n A 1 75 THR 75 122 122 THR THR A . n A 1 76 SER 76 123 123 SER SER A . n A 1 77 THR 77 124 124 THR THR A . n A 1 78 THR 78 125 125 THR THR A . n A 1 79 VAL 79 126 126 VAL VAL A . n A 1 80 LYS 80 127 127 LYS LYS A . n A 1 81 ALA 81 128 128 ALA ALA A . n A 1 82 ALA 82 129 129 ALA ALA A . n A 1 83 CYS 83 130 130 CYS CYS A . n A 1 84 GLU 84 131 131 GLU GLU A . n A 1 85 TRP 85 132 132 TRP TRP A . n A 1 86 ALA 86 133 133 ALA ALA A . n A 1 87 GLY 87 134 134 GLY GLY A . n A 1 88 ILE 88 135 135 ILE ILE A . n A 1 89 LYS 89 136 136 LYS LYS A . n A 1 90 GLN 90 137 137 GLN GLN A . n A 1 91 GLU 91 138 138 GLU GLU A . n A 1 92 PHE 92 139 139 PHE PHE A . n A 1 93 GLY 93 140 140 GLY GLY A . n A 1 94 ILE 94 141 141 ILE ILE A . n A 1 95 PRO 95 142 142 PRO PRO A . n A 1 96 TYR 96 143 ? ? ? A . n A 1 97 ASN 97 144 ? ? ? A . n A 1 98 PRO 98 145 ? ? ? A . n A 1 99 GLN 99 146 ? ? ? A . n A 1 100 SER 100 147 ? ? ? A . n A 1 101 GLN 101 148 ? ? ? A . n A 1 102 GLY 102 149 ? ? ? A . n A 1 103 VAL 103 150 ? ? ? A . n A 1 104 ILE 104 151 ? ? ? A . n A 1 105 GLU 105 152 ? ? ? A . n A 1 106 SER 106 153 153 SER SER A . n A 1 107 MET 107 154 154 MET MET A . n A 1 108 ASN 108 155 155 ASN ASN A . n A 1 109 LYS 109 156 156 LYS LYS A . n A 1 110 GLU 110 157 157 GLU GLU A . n A 1 111 LEU 111 158 158 LEU LEU A . n A 1 112 LYS 112 159 159 LYS LYS A . n A 1 113 LYS 113 160 160 LYS LYS A . n A 1 114 ILE 114 161 161 ILE ILE A . n A 1 115 ILE 115 162 162 ILE ILE A . n A 1 116 GLY 116 163 163 GLY GLY A . n A 1 117 GLN 117 164 164 GLN GLN A . n A 1 118 VAL 118 165 165 VAL VAL A . n A 1 119 ARG 119 166 166 ARG ARG A . n A 1 120 ASP 120 167 167 ASP ASP A . n A 1 121 GLN 121 168 168 GLN GLN A . n A 1 122 ALA 122 169 169 ALA ALA A . n A 1 123 GLU 123 170 170 GLU GLU A . n A 1 124 HIS 124 171 171 HIS HIS A . n A 1 125 LEU 125 172 172 LEU LEU A . n A 1 126 LYS 126 173 173 LYS LYS A . n A 1 127 THR 127 174 174 THR THR A . n A 1 128 ALA 128 175 175 ALA ALA A . n A 1 129 VAL 129 176 176 VAL VAL A . n A 1 130 GLN 130 177 177 GLN GLN A . n A 1 131 MET 131 178 178 MET MET A . n A 1 132 ALA 132 179 179 ALA ALA A . n A 1 133 VAL 133 180 180 VAL VAL A . n A 1 134 PHE 134 181 181 PHE PHE A . n A 1 135 ILE 135 182 182 ILE ILE A . n A 1 136 HIS 136 183 183 HIS HIS A . n A 1 137 ASN 137 184 184 ASN ASN A . n A 1 138 LYS 138 185 185 LYS LYS A . n A 1 139 LYS 139 186 186 LYS LYS A . n A 1 140 ARG 140 187 187 ARG ARG A . n A 1 141 LYS 141 188 ? ? ? A . n A 1 142 GLY 142 189 ? ? ? A . n A 1 143 GLY 143 190 ? ? ? A . n A 1 144 ILE 144 191 191 ILE ILE A . n A 1 145 GLY 145 192 192 GLY GLY A . n A 1 146 GLY 146 193 193 GLY GLY A . n A 1 147 TYR 147 194 194 TYR TYR A . n A 1 148 SER 148 195 195 SER SER A . n A 1 149 ALA 149 196 196 ALA ALA A . n A 1 150 GLY 150 197 197 GLY GLY A . n A 1 151 GLU 151 198 198 GLU GLU A . n A 1 152 ARG 152 199 199 ARG ARG A . n A 1 153 ILE 153 200 200 ILE ILE A . n A 1 154 VAL 154 201 201 VAL VAL A . n A 1 155 ASP 155 202 202 ASP ASP A . n A 1 156 ILE 156 203 203 ILE ILE A . n A 1 157 ILE 157 204 204 ILE ILE A . n A 1 158 ALA 158 205 205 ALA ALA A . n A 1 159 THR 159 206 206 THR THR A . n A 1 160 ASP 160 207 207 ASP ASP A . n A 1 161 ILE 161 208 ? ? ? A . n A 1 162 GLU 162 209 ? ? ? A . n A 1 163 THR 163 210 ? ? ? A . n A 1 164 LYS 164 211 ? ? ? A . n B 1 1 GLY 1 48 ? ? ? B . n B 1 2 SER 2 49 ? ? ? B . n B 1 3 MET 3 50 ? ? ? B . n B 1 4 HIS 4 51 ? ? ? B . n B 1 5 GLY 5 52 ? ? ? B . n B 1 6 GLU 6 53 ? ? ? B . n B 1 7 VAL 7 54 ? ? ? B . n B 1 8 ASP 8 55 ? ? ? B . n B 1 9 SER 9 56 56 SER SER B . n B 1 10 SER 10 57 57 SER SER B . n B 1 11 PRO 11 58 58 PRO PRO B . n B 1 12 GLY 12 59 59 GLY GLY B . n B 1 13 ILE 13 60 60 ILE ILE B . n B 1 14 TRP 14 61 61 TRP TRP B . n B 1 15 GLN 15 62 62 GLN GLN B . n B 1 16 LEU 16 63 63 LEU LEU B . n B 1 17 ASP 17 64 64 ASP ASP B . n B 1 18 CSO 18 65 65 CSO CSO B . n B 1 19 THR 19 66 66 THR THR B . n B 1 20 HIS 20 67 67 HIS HIS B . n B 1 21 LEU 21 68 68 LEU LEU B . n B 1 22 GLU 22 69 69 GLU GLU B . n B 1 23 GLY 23 70 70 GLY GLY B . n B 1 24 LYS 24 71 71 LYS LYS B . n B 1 25 VAL 25 72 72 VAL VAL B . n B 1 26 ILE 26 73 73 ILE ILE B . n B 1 27 LEU 27 74 74 LEU LEU B . n B 1 28 VAL 28 75 75 VAL VAL B . n B 1 29 ALA 29 76 76 ALA ALA B . n B 1 30 VAL 30 77 77 VAL VAL B . n B 1 31 HIS 31 78 78 HIS HIS B . n B 1 32 VAL 32 79 79 VAL VAL B . n B 1 33 ALA 33 80 80 ALA ALA B . n B 1 34 SER 34 81 81 SER SER B . n B 1 35 GLY 35 82 82 GLY GLY B . n B 1 36 TYR 36 83 83 TYR TYR B . n B 1 37 ILE 37 84 84 ILE ILE B . n B 1 38 GLU 38 85 85 GLU GLU B . n B 1 39 ALA 39 86 86 ALA ALA B . n B 1 40 GLU 40 87 87 GLU GLU B . n B 1 41 VAL 41 88 88 VAL VAL B . n B 1 42 ILE 42 89 89 ILE ILE B . n B 1 43 PRO 43 90 ? ? ? B . n B 1 44 ALA 44 91 ? ? ? B . n B 1 45 GLU 45 92 ? ? ? B . n B 1 46 THR 46 93 93 THR THR B . n B 1 47 GLY 47 94 94 GLY GLY B . n B 1 48 GLN 48 95 95 GLN GLN B . n B 1 49 GLU 49 96 96 GLU GLU B . n B 1 50 THR 50 97 97 THR THR B . n B 1 51 ALA 51 98 98 ALA ALA B . n B 1 52 TYR 52 99 99 TYR TYR B . n B 1 53 PHE 53 100 100 PHE PHE B . n B 1 54 LEU 54 101 101 LEU LEU B . n B 1 55 LEU 55 102 102 LEU LEU B . n B 1 56 LYS 56 103 103 LYS LYS B . n B 1 57 LEU 57 104 104 LEU LEU B . n B 1 58 ALA 58 105 105 ALA ALA B . n B 1 59 GLY 59 106 106 GLY GLY B . n B 1 60 ARG 60 107 107 ARG ARG B . n B 1 61 TRP 61 108 108 TRP TRP B . n B 1 62 PRO 62 109 109 PRO PRO B . n B 1 63 VAL 63 110 110 VAL VAL B . n B 1 64 LYS 64 111 111 LYS LYS B . n B 1 65 THR 65 112 112 THR THR B . n B 1 66 VAL 66 113 113 VAL VAL B . n B 1 67 HIS 67 114 114 HIS HIS B . n B 1 68 THR 68 115 115 THR THR B . n B 1 69 ASP 69 116 116 ASP ASP B . n B 1 70 ASN 70 117 117 ASN ASN B . n B 1 71 GLY 71 118 118 GLY GLY B . n B 1 72 SER 72 119 119 SER SER B . n B 1 73 ASN 73 120 120 ASN ASN B . n B 1 74 PHE 74 121 121 PHE PHE B . n B 1 75 THR 75 122 122 THR THR B . n B 1 76 SER 76 123 123 SER SER B . n B 1 77 THR 77 124 124 THR THR B . n B 1 78 THR 78 125 125 THR THR B . n B 1 79 VAL 79 126 126 VAL VAL B . n B 1 80 LYS 80 127 127 LYS LYS B . n B 1 81 ALA 81 128 128 ALA ALA B . n B 1 82 ALA 82 129 129 ALA ALA B . n B 1 83 CYS 83 130 130 CYS CYS B . n B 1 84 GLU 84 131 131 GLU GLU B . n B 1 85 TRP 85 132 132 TRP TRP B . n B 1 86 ALA 86 133 133 ALA ALA B . n B 1 87 GLY 87 134 134 GLY GLY B . n B 1 88 ILE 88 135 135 ILE ILE B . n B 1 89 LYS 89 136 136 LYS LYS B . n B 1 90 GLN 90 137 137 GLN GLN B . n B 1 91 GLU 91 138 138 GLU GLU B . n B 1 92 PHE 92 139 139 PHE PHE B . n B 1 93 GLY 93 140 140 GLY GLY B . n B 1 94 ILE 94 141 ? ? ? B . n B 1 95 PRO 95 142 ? ? ? B . n B 1 96 TYR 96 143 ? ? ? B . n B 1 97 ASN 97 144 ? ? ? B . n B 1 98 PRO 98 145 ? ? ? B . n B 1 99 GLN 99 146 ? ? ? B . n B 1 100 SER 100 147 ? ? ? B . n B 1 101 GLN 101 148 ? ? ? B . n B 1 102 GLY 102 149 ? ? ? B . n B 1 103 VAL 103 150 ? ? ? B . n B 1 104 ILE 104 151 ? ? ? B . n B 1 105 GLU 105 152 ? ? ? B . n B 1 106 SER 106 153 ? ? ? B . n B 1 107 MET 107 154 ? ? ? B . n B 1 108 ASN 108 155 155 ASN ASN B . n B 1 109 LYS 109 156 156 LYS LYS B . n B 1 110 GLU 110 157 157 GLU GLU B . n B 1 111 LEU 111 158 158 LEU LEU B . n B 1 112 LYS 112 159 159 LYS LYS B . n B 1 113 LYS 113 160 160 LYS LYS B . n B 1 114 ILE 114 161 161 ILE ILE B . n B 1 115 ILE 115 162 162 ILE ILE B . n B 1 116 GLY 116 163 163 GLY GLY B . n B 1 117 GLN 117 164 164 GLN GLN B . n B 1 118 VAL 118 165 165 VAL VAL B . n B 1 119 ARG 119 166 166 ARG ARG B . n B 1 120 ASP 120 167 167 ASP ASP B . n B 1 121 GLN 121 168 168 GLN GLN B . n B 1 122 ALA 122 169 169 ALA ALA B . n B 1 123 GLU 123 170 170 GLU GLU B . n B 1 124 HIS 124 171 171 HIS HIS B . n B 1 125 LEU 125 172 172 LEU LEU B . n B 1 126 LYS 126 173 173 LYS LYS B . n B 1 127 THR 127 174 174 THR THR B . n B 1 128 ALA 128 175 175 ALA ALA B . n B 1 129 VAL 129 176 176 VAL VAL B . n B 1 130 GLN 130 177 177 GLN GLN B . n B 1 131 MET 131 178 178 MET MET B . n B 1 132 ALA 132 179 179 ALA ALA B . n B 1 133 VAL 133 180 180 VAL VAL B . n B 1 134 PHE 134 181 181 PHE PHE B . n B 1 135 ILE 135 182 182 ILE ILE B . n B 1 136 HIS 136 183 183 HIS HIS B . n B 1 137 ASN 137 184 184 ASN ASN B . n B 1 138 LYS 138 185 185 LYS LYS B . n B 1 139 LYS 139 186 186 LYS LYS B . n B 1 140 ARG 140 187 187 ARG ARG B . n B 1 141 LYS 141 188 188 LYS LYS B . n B 1 142 GLY 142 189 189 GLY GLY B . n B 1 143 GLY 143 190 190 GLY GLY B . n B 1 144 ILE 144 191 191 ILE ILE B . n B 1 145 GLY 145 192 192 GLY GLY B . n B 1 146 GLY 146 193 193 GLY GLY B . n B 1 147 TYR 147 194 194 TYR TYR B . n B 1 148 SER 148 195 195 SER SER B . n B 1 149 ALA 149 196 196 ALA ALA B . n B 1 150 GLY 150 197 197 GLY GLY B . n B 1 151 GLU 151 198 198 GLU GLU B . n B 1 152 ARG 152 199 199 ARG ARG B . n B 1 153 ILE 153 200 200 ILE ILE B . n B 1 154 VAL 154 201 201 VAL VAL B . n B 1 155 ASP 155 202 202 ASP ASP B . n B 1 156 ILE 156 203 203 ILE ILE B . n B 1 157 ILE 157 204 204 ILE ILE B . n B 1 158 ALA 158 205 205 ALA ALA B . n B 1 159 THR 159 206 206 THR THR B . n B 1 160 ASP 160 207 207 ASP ASP B . n B 1 161 ILE 161 208 208 ILE ILE B . n B 1 162 GLU 162 209 ? ? ? B . n B 1 163 THR 163 210 ? ? ? B . n B 1 164 LYS 164 211 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD 1 301 1 IOD IOD A . D 2 IOD 1 302 3 IOD IOD A . E 2 IOD 1 303 4 IOD IOD A . F 2 IOD 1 304 5 IOD IOD A . G 3 SO4 1 305 3 SO4 SO4 A . H 3 SO4 1 306 4 SO4 SO4 A . I 3 SO4 1 307 5 SO4 SO4 A . J 3 SO4 1 308 10 SO4 SO4 A . K 2 IOD 1 301 2 IOD IOD B . L 2 IOD 1 302 6 IOD IOD B . M 3 SO4 1 303 6 SO4 SO4 B . N 3 SO4 1 304 7 SO4 SO4 B . O 3 SO4 1 305 9 SO4 SO4 B . P 3 SO4 1 306 12 SO4 SO4 B . Q 3 SO4 1 307 13 SO4 SO4 B . R 4 R2A 1 308 1 R2A LIG B . S 5 HOH 1 401 7 HOH HOH A . S 5 HOH 2 402 84 HOH HOH A . S 5 HOH 3 403 28 HOH HOH A . S 5 HOH 4 404 1 HOH HOH A . S 5 HOH 5 405 36 HOH HOH A . S 5 HOH 6 406 27 HOH HOH A . S 5 HOH 7 407 3 HOH HOH A . S 5 HOH 8 408 10 HOH HOH A . S 5 HOH 9 409 48 HOH HOH A . S 5 HOH 10 410 79 HOH HOH A . S 5 HOH 11 411 25 HOH HOH A . S 5 HOH 12 412 6 HOH HOH A . S 5 HOH 13 413 42 HOH HOH A . S 5 HOH 14 414 20 HOH HOH A . S 5 HOH 15 415 73 HOH HOH A . S 5 HOH 16 416 2 HOH HOH A . S 5 HOH 17 417 14 HOH HOH A . S 5 HOH 18 418 61 HOH HOH A . S 5 HOH 19 419 11 HOH HOH A . S 5 HOH 20 420 90 HOH HOH A . S 5 HOH 21 421 91 HOH HOH A . S 5 HOH 22 422 49 HOH HOH A . S 5 HOH 23 423 19 HOH HOH A . T 5 HOH 1 401 53 HOH HOH B . T 5 HOH 2 402 78 HOH HOH B . T 5 HOH 3 403 75 HOH HOH B . T 5 HOH 4 404 52 HOH HOH B . T 5 HOH 5 405 30 HOH HOH B . T 5 HOH 6 406 60 HOH HOH B . T 5 HOH 7 407 15 HOH HOH B . T 5 HOH 8 408 83 HOH HOH B . T 5 HOH 9 409 56 HOH HOH B . T 5 HOH 10 410 5 HOH HOH B . T 5 HOH 11 411 33 HOH HOH B . T 5 HOH 12 412 23 HOH HOH B . T 5 HOH 13 413 26 HOH HOH B . T 5 HOH 14 414 32 HOH HOH B . T 5 HOH 15 415 16 HOH HOH B . T 5 HOH 16 416 29 HOH HOH B . T 5 HOH 17 417 21 HOH HOH B . T 5 HOH 18 418 37 HOH HOH B . T 5 HOH 19 419 24 HOH HOH B . T 5 HOH 20 420 13 HOH HOH B . T 5 HOH 21 421 4 HOH HOH B . T 5 HOH 22 422 9 HOH HOH B . T 5 HOH 23 423 22 HOH HOH B . T 5 HOH 24 424 55 HOH HOH B . T 5 HOH 25 425 39 HOH HOH B . T 5 HOH 26 426 50 HOH HOH B . T 5 HOH 27 427 35 HOH HOH B . T 5 HOH 28 428 17 HOH HOH B . T 5 HOH 29 429 89 HOH HOH B . T 5 HOH 30 430 88 HOH HOH B . T 5 HOH 31 431 81 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CSO 18 A CSO 65 ? CYS 'modified residue' 2 B CSO 18 B CSO 65 ? CYS 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5600 ? 1 MORE -128 ? 1 'SSA (A^2)' 12650 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2021-01-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.13_2998-000)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_entry_details.entry_id 6VLH _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH A TYR 99 ? ? OE2 B GLU 87 ? ? 1.33 2 1 HD1 A HIS 114 ? ? O A GLY 140 ? ? 1.42 3 1 O A LYS 111 ? ? H A LYS 136 ? ? 1.45 4 1 HD22 A ASN 120 ? ? OE1 A GLN 137 ? ? 1.49 5 1 HD1 B HIS 67 ? ? O1 B SO4 303 ? ? 1.50 6 1 OG1 B THR 93 ? ? H B GLY 94 ? ? 1.52 7 1 HG B SER 123 ? ? O1 B SO4 306 ? ? 1.54 8 1 OE2 A GLU 157 ? ? HD1 A HIS 183 ? ? 1.55 9 1 O B HOH 417 ? ? O B HOH 419 ? ? 1.88 10 1 OH A TYR 99 ? ? OE2 B GLU 87 ? ? 1.91 11 1 O A LYS 103 ? ? O A HOH 401 ? ? 2.01 12 1 O A HOH 416 ? ? O B HOH 417 ? ? 2.03 13 1 O B ARG 107 ? ? O B HOH 401 ? ? 2.09 14 1 OE1 A GLU 85 ? ? NH1 A ARG 107 ? ? 2.12 15 1 OG B SER 57 ? ? O1 B SO4 305 ? ? 2.16 16 1 ND1 A HIS 114 ? ? O A GLY 140 ? ? 2.17 17 1 O B THR 124 ? ? O B HOH 402 ? ? 2.18 18 1 NH2 A ARG 199 ? ? O A HOH 402 ? ? 2.19 19 1 O A PRO 58 ? ? O A HOH 403 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 425 ? ? 1_555 O B HOH 426 ? ? 4_555 1.91 2 1 OG1 B THR 122 ? ? 1_555 O3 A SO4 308 ? ? 3_554 2.06 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 57 ? ? -150.07 -118.95 2 1 PRO A 58 ? ? -31.40 -93.75 3 1 GLU A 170 ? ? -80.53 -84.06 4 1 THR A 206 ? ? -27.66 -59.67 5 1 SER B 57 ? ? 154.25 153.81 6 1 LEU B 68 ? ? -171.19 136.16 7 1 PHE B 100 ? ? -28.41 -65.94 8 1 ASN B 117 ? ? -104.82 -169.47 9 1 ILE B 191 ? ? -135.18 -58.17 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 48 ? A GLY 1 2 1 Y 1 A SER 49 ? A SER 2 3 1 Y 1 A MET 50 ? A MET 3 4 1 Y 1 A HIS 51 ? A HIS 4 5 1 Y 1 A GLY 52 ? A GLY 5 6 1 Y 1 A GLU 53 ? A GLU 6 7 1 Y 1 A VAL 54 ? A VAL 7 8 1 Y 1 A ASP 55 ? A ASP 8 9 1 Y 1 A GLU 92 ? A GLU 45 10 1 Y 1 A THR 93 ? A THR 46 11 1 Y 1 A TYR 143 ? A TYR 96 12 1 Y 1 A ASN 144 ? A ASN 97 13 1 Y 1 A PRO 145 ? A PRO 98 14 1 Y 1 A GLN 146 ? A GLN 99 15 1 Y 1 A SER 147 ? A SER 100 16 1 Y 1 A GLN 148 ? A GLN 101 17 1 Y 1 A GLY 149 ? A GLY 102 18 1 Y 1 A VAL 150 ? A VAL 103 19 1 Y 1 A ILE 151 ? A ILE 104 20 1 Y 1 A GLU 152 ? A GLU 105 21 1 Y 1 A LYS 188 ? A LYS 141 22 1 Y 1 A GLY 189 ? A GLY 142 23 1 Y 1 A GLY 190 ? A GLY 143 24 1 Y 1 A ILE 208 ? A ILE 161 25 1 Y 1 A GLU 209 ? A GLU 162 26 1 Y 1 A THR 210 ? A THR 163 27 1 Y 1 A LYS 211 ? A LYS 164 28 1 Y 1 B GLY 48 ? B GLY 1 29 1 Y 1 B SER 49 ? B SER 2 30 1 Y 1 B MET 50 ? B MET 3 31 1 Y 1 B HIS 51 ? B HIS 4 32 1 Y 1 B GLY 52 ? B GLY 5 33 1 Y 1 B GLU 53 ? B GLU 6 34 1 Y 1 B VAL 54 ? B VAL 7 35 1 Y 1 B ASP 55 ? B ASP 8 36 1 Y 1 B PRO 90 ? B PRO 43 37 1 Y 1 B ALA 91 ? B ALA 44 38 1 Y 1 B GLU 92 ? B GLU 45 39 1 Y 1 B ILE 141 ? B ILE 94 40 1 Y 1 B PRO 142 ? B PRO 95 41 1 Y 1 B TYR 143 ? B TYR 96 42 1 Y 1 B ASN 144 ? B ASN 97 43 1 Y 1 B PRO 145 ? B PRO 98 44 1 Y 1 B GLN 146 ? B GLN 99 45 1 Y 1 B SER 147 ? B SER 100 46 1 Y 1 B GLN 148 ? B GLN 101 47 1 Y 1 B GLY 149 ? B GLY 102 48 1 Y 1 B VAL 150 ? B VAL 103 49 1 Y 1 B ILE 151 ? B ILE 104 50 1 Y 1 B GLU 152 ? B GLU 105 51 1 Y 1 B SER 153 ? B SER 106 52 1 Y 1 B MET 154 ? B MET 107 53 1 Y 1 B GLU 209 ? B GLU 162 54 1 Y 1 B THR 210 ? B THR 163 55 1 Y 1 B LYS 211 ? B LYS 164 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id R2A _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id R2A _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 'SULFATE ION' SO4 4 ;(2-{[3-(4-{2-[(3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}benzene-1-carbonyl)amino]ethyl}piperazine-1-carbonyl)phenyl]ethynyl}-5-methyl-1-benzofuran-3-yl)acetic acid ; R2A 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #