HEADER VIRUS 30-JAN-20 6VOC TITLE ICOSAHEDRAL SYMMETRY RECONSTRUCTION OF BROME MOSAIC VIRUS (RNA 3+4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: B, C, A; COMPND 4 SYNONYM: CP,COAT PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BROME MOSAIC VIRUS; SOURCE 3 ORGANISM_COMMON: BMV; SOURCE 4 ORGANISM_TAXID: 12302; SOURCE 5 GENE: ORF3B; SOURCE 6 EXPRESSION_SYSTEM: NICOTIANA BENTHAMIANA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4100 KEYWDS BROME MOSAIC VIRUS (RNA 3 AND 4), VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR C.BEREN,Y.X.CUI,A.CHAKRAVARTY,X.YANG,A.L.N.RAO,C.M.KNOBLER,Z.H.ZHOU, AUTHOR 2 W.M.GELBART REVDAT 3 06-MAR-24 6VOC 1 REMARK REVDAT 2 27-MAY-20 6VOC 1 JRNL REVDAT 1 20-MAY-20 6VOC 0 JRNL AUTH C.BEREN,Y.CUI,A.CHAKRAVARTY,X.YANG,A.L.N.RAO,C.M.KNOBLER, JRNL AUTH 2 Z.H.ZHOU,W.M.GELBART JRNL TITL GENOME ORGANIZATION AND INTERACTION WITH CAPSID PROTEIN IN A JRNL TITL 2 MULTIPARTITE RNA VIRUS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 10673 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32358197 JRNL DOI 10.1073/PNAS.1915078117 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 70470 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6VOC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000246685. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BROME MOSAIC VIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.20 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.559048 -0.789435 0.253492 0.00000 REMARK 350 BIOMT2 2 0.722264 0.313528 -0.616470 0.00001 REMARK 350 BIOMT3 2 0.407186 0.527724 0.745457 0.00000 REMARK 350 BIOMT1 3 -0.154427 -0.555068 0.817344 0.00000 REMARK 350 BIOMT2 3 0.379213 -0.797206 -0.469745 0.00002 REMARK 350 BIOMT3 3 0.912332 0.237406 0.333599 0.00000 REMARK 350 BIOMT1 4 -0.154427 0.379213 0.912332 -0.00001 REMARK 350 BIOMT2 4 -0.555068 -0.797206 0.237406 0.00000 REMARK 350 BIOMT3 4 0.817344 -0.469745 0.333599 0.00001 REMARK 350 BIOMT1 5 0.559048 0.722264 0.407186 0.00000 REMARK 350 BIOMT2 5 -0.789435 0.313528 0.527724 0.00000 REMARK 350 BIOMT3 5 0.253492 -0.616470 0.745457 0.00000 REMARK 350 BIOMT1 6 -0.002903 0.578579 0.815621 -0.00001 REMARK 350 BIOMT2 6 0.578579 -0.664272 0.473275 0.00002 REMARK 350 BIOMT3 6 0.815621 0.473275 -0.332825 0.00000 REMARK 350 BIOMT1 7 0.748373 0.614116 0.250599 0.00000 REMARK 350 BIOMT2 7 0.036385 -0.415260 0.908975 0.00002 REMARK 350 BIOMT3 7 0.662279 -0.671135 -0.333114 0.00000 REMARK 350 BIOMT1 8 0.963970 -0.266002 -0.002067 0.00000 REMARK 350 BIOMT2 8 0.090536 0.320769 0.942820 0.00001 REMARK 350 BIOMT3 8 -0.250129 -0.909038 0.333295 0.00000 REMARK 350 BIOMT1 9 0.345941 -0.845481 0.406800 0.00000 REMARK 350 BIOMT2 9 0.666197 0.526647 0.528038 0.00002 REMARK 350 BIOMT3 9 -0.660687 0.088339 0.745446 -0.00001 REMARK 350 BIOMT1 10 -0.251620 -0.323502 0.912159 0.00000 REMARK 350 BIOMT2 10 0.967824 -0.082141 0.237843 0.00002 REMARK 350 BIOMT3 10 -0.002017 0.942656 0.333761 -0.00001 REMARK 350 BIOMT1 11 -0.999994 -0.002831 0.002001 -0.00003 REMARK 350 BIOMT2 11 -0.002831 0.333744 -0.942660 0.00000 REMARK 350 BIOMT3 11 0.002001 -0.942660 -0.333750 0.00000 REMARK 350 BIOMT1 12 -0.560275 0.789598 -0.250254 -0.00003 REMARK 350 BIOMT2 12 -0.144369 -0.390592 -0.909173 0.00000 REMARK 350 BIOMT3 12 -0.815628 -0.473258 0.332832 -0.00001 REMARK 350 BIOMT1 13 0.155178 0.557797 -0.815342 -0.00002 REMARK 350 BIOMT2 13 -0.733022 -0.488284 -0.473558 0.00000 REMARK 350 BIOMT3 13 -0.662268 0.671149 0.333106 -0.00002 REMARK 350 BIOMT1 14 0.157632 -0.377893 -0.912331 -0.00001 REMARK 350 BIOMT2 14 -0.955291 0.175674 -0.237820 0.00000 REMARK 350 BIOMT3 14 0.250143 0.909030 -0.333306 -0.00001 REMARK 350 BIOMT1 15 -0.556303 -0.724380 -0.407186 -0.00002 REMARK 350 BIOMT2 15 -0.504008 0.683715 -0.527741 0.00000 REMARK 350 BIOMT3 15 0.660684 -0.088359 -0.745446 0.00000 REMARK 350 BIOMT1 16 0.002897 -0.575748 -0.817622 -0.00001 REMARK 350 BIOMT2 16 -0.575748 -0.669472 0.469385 0.00000 REMARK 350 BIOMT3 16 -0.817622 0.469385 -0.333425 -0.00002 REMARK 350 BIOMT1 17 -0.747147 -0.614279 -0.253837 -0.00002 REMARK 350 BIOMT2 17 -0.614279 0.492323 0.616668 0.00000 REMARK 350 BIOMT3 17 -0.253837 0.616668 -0.745176 -0.00002 REMARK 350 BIOMT1 18 -0.964721 0.263274 0.000065 -0.00003 REMARK 350 BIOMT2 18 0.263274 0.964721 0.000483 0.00000 REMARK 350 BIOMT3 18 0.000065 0.000483 -1.000000 -0.00001 REMARK 350 BIOMT1 19 -0.349146 0.844162 -0.406801 -0.00003 REMARK 350 BIOMT2 19 0.844162 0.094885 -0.527624 0.00002 REMARK 350 BIOMT3 19 -0.406801 -0.527624 -0.745738 -0.00001 REMARK 350 BIOMT1 20 0.248874 0.325618 -0.912159 -0.00002 REMARK 350 BIOMT2 20 0.325618 -0.915102 -0.237827 0.00002 REMARK 350 BIOMT3 20 -0.912159 -0.237827 -0.333773 -0.00002 REMARK 350 BIOMT1 21 -0.500000 -0.866025 -0.000466 -0.00001 REMARK 350 BIOMT2 21 0.866025 -0.500000 -0.000173 0.00002 REMARK 350 BIOMT3 21 -0.000083 -0.000490 1.000000 0.00000 REMARK 350 BIOMT1 22 -0.905213 0.122948 0.406785 -0.00003 REMARK 350 BIOMT2 22 0.122948 -0.840526 0.527636 0.00002 REMARK 350 BIOMT3 22 0.406785 0.527636 0.745738 0.00000 REMARK 350 BIOMT1 23 -0.251620 0.967824 -0.002017 -0.00003 REMARK 350 BIOMT2 23 -0.323502 -0.082141 0.942656 0.00000 REMARK 350 BIOMT3 23 0.912159 0.237843 0.333761 0.00000 REMARK 350 BIOMT1 24 0.557536 0.501013 -0.661921 -0.00001 REMARK 350 BIOMT2 24 0.143655 0.727092 0.671342 0.00000 REMARK 350 BIOMT3 24 0.817629 -0.469386 0.333406 0.00001 REMARK 350 BIOMT1 25 0.404028 -0.632368 -0.660963 0.00000 REMARK 350 BIOMT2 25 0.878823 0.468841 0.088642 0.00002 REMARK 350 BIOMT3 25 0.253832 -0.616684 0.745165 0.00000 REMARK 350 BIOMT1 26 -0.499993 0.285766 -0.817524 -0.00003 REMARK 350 BIOMT2 26 -0.291944 0.833118 0.469769 0.00000 REMARK 350 BIOMT3 26 0.815338 0.473553 -0.333125 0.00000 REMARK 350 BIOMT1 27 -0.406006 0.052880 -0.912339 -0.00003 REMARK 350 BIOMT2 27 0.629803 0.739586 -0.237405 0.00000 REMARK 350 BIOMT3 27 0.662199 -0.670982 -0.333580 0.00000 REMARK 350 BIOMT1 28 -0.560275 -0.144369 -0.815628 -0.00003 REMARK 350 BIOMT2 28 0.789598 -0.390592 -0.473258 0.00002 REMARK 350 BIOMT3 28 -0.250254 -0.909173 0.332832 0.00000 REMARK 350 BIOMT1 29 -0.749606 -0.033391 -0.661042 -0.00003 REMARK 350 BIOMT2 29 -0.033391 -0.995547 0.088151 0.00002 REMARK 350 BIOMT3 29 -0.661042 0.088151 0.745153 -0.00001 REMARK 350 BIOMT1 30 -0.712349 0.232448 -0.662213 -0.00003 REMARK 350 BIOMT2 30 -0.701821 -0.239253 0.670974 0.00000 REMARK 350 BIOMT3 30 -0.002470 0.942723 0.333569 -0.00001 REMARK 350 BIOMT1 31 0.502448 -0.287175 0.815522 0.00000 REMARK 350 BIOMT2 31 -0.864605 -0.169160 0.473120 0.00000 REMARK 350 BIOMT3 31 0.002085 -0.942823 -0.333287 0.00000 REMARK 350 BIOMT1 32 0.405545 -0.056316 0.912339 0.00000 REMARK 350 BIOMT2 32 -0.412886 0.879190 0.237803 0.00000 REMARK 350 BIOMT3 32 -0.815511 -0.473132 0.333299 -0.00001 REMARK 350 BIOMT1 33 0.557536 0.143655 0.817629 0.00000 REMARK 350 BIOMT2 33 0.501013 0.727092 -0.469386 0.00000 REMARK 350 BIOMT3 33 -0.661921 0.671342 0.333406 -0.00002 REMARK 350 BIOMT1 34 0.748373 0.036385 0.662279 0.00000 REMARK 350 BIOMT2 34 0.614116 -0.415260 -0.671135 0.00002 REMARK 350 BIOMT3 34 0.250599 0.908975 -0.333114 -0.00001 REMARK 350 BIOMT1 35 0.714327 -0.229883 0.660977 0.00000 REMARK 350 BIOMT2 35 -0.229883 -0.969174 -0.088634 0.00001 REMARK 350 BIOMT3 35 0.660977 -0.088634 -0.745153 0.00000 REMARK 350 BIOMT1 36 0.497545 0.867434 0.002467 -0.00001 REMARK 350 BIOMT2 36 0.290524 -0.163958 -0.942716 0.00000 REMARK 350 BIOMT3 36 -0.817340 0.469761 -0.333587 -0.00002 REMARK 350 BIOMT1 37 0.905673 -0.119512 -0.406784 0.00000 REMARK 350 BIOMT2 37 -0.339864 -0.778250 -0.528034 0.00000 REMARK 350 BIOMT3 37 -0.253473 0.616478 -0.745457 -0.00002 REMARK 350 BIOMT1 38 0.254359 -0.967110 0.000016 0.00000 REMARK 350 BIOMT2 38 -0.967110 -0.254359 -0.000012 0.00000 REMARK 350 BIOMT3 38 0.000016 -0.000012 -1.000000 -0.00001 REMARK 350 BIOMT1 39 -0.556303 -0.504008 0.660684 -0.00001 REMARK 350 BIOMT2 39 -0.724380 0.683715 -0.088359 0.00000 REMARK 350 BIOMT3 39 -0.407186 -0.527741 -0.745446 -0.00001 REMARK 350 BIOMT1 40 -0.406006 0.629803 0.662199 -0.00002 REMARK 350 BIOMT2 40 0.052880 0.739586 -0.670982 0.00000 REMARK 350 BIOMT3 40 -0.912339 -0.237405 -0.333580 -0.00002 REMARK 350 BIOMT1 41 -0.500000 0.866025 -0.000083 -0.00003 REMARK 350 BIOMT2 41 -0.866025 -0.500000 -0.000490 0.00000 REMARK 350 BIOMT3 41 -0.000466 -0.000173 1.000000 0.00000 REMARK 350 BIOMT1 42 0.345941 0.666197 -0.660687 -0.00002 REMARK 350 BIOMT2 42 -0.845481 0.526647 0.088339 0.00000 REMARK 350 BIOMT3 42 0.406800 0.528038 0.745446 0.00000 REMARK 350 BIOMT1 43 0.405545 -0.412886 -0.815511 0.00000 REMARK 350 BIOMT2 43 -0.056316 0.879190 -0.473132 0.00000 REMARK 350 BIOMT3 43 0.912339 0.237803 0.333299 0.00000 REMARK 350 BIOMT1 44 -0.403558 -0.879968 -0.250594 -0.00001 REMARK 350 BIOMT2 44 0.410871 0.070426 -0.908969 0.00000 REMARK 350 BIOMT3 44 0.817512 -0.469784 0.333132 0.00001 REMARK 350 BIOMT1 45 -0.963216 -0.089557 0.253368 -0.00003 REMARK 350 BIOMT2 45 -0.089557 -0.781960 -0.616861 0.00000 REMARK 350 BIOMT3 45 0.253368 -0.616861 0.745176 0.00000 REMARK 350 BIOMT1 46 0.502448 -0.864605 0.002085 0.00000 REMARK 350 BIOMT2 46 -0.287175 -0.169160 -0.942823 0.00000 REMARK 350 BIOMT3 46 0.815522 0.473120 -0.333287 0.00000 REMARK 350 BIOMT1 47 -0.342731 -0.666627 0.661924 0.00000 REMARK 350 BIOMT2 47 -0.666627 -0.323881 -0.671349 0.00000 REMARK 350 BIOMT3 47 0.661924 -0.671349 -0.333388 0.00000 REMARK 350 BIOMT1 48 -0.403558 0.410871 0.817512 -0.00002 REMARK 350 BIOMT2 48 -0.879968 0.070426 -0.469784 0.00000 REMARK 350 BIOMT3 48 -0.250594 -0.908969 0.333132 0.00000 REMARK 350 BIOMT1 49 0.404028 0.878823 0.253832 -0.00001 REMARK 350 BIOMT2 49 -0.632368 0.468841 -0.616684 0.00000 REMARK 350 BIOMT3 49 -0.660963 0.088642 0.745165 -0.00001 REMARK 350 BIOMT1 50 0.963970 0.090536 -0.250129 0.00000 REMARK 350 BIOMT2 50 -0.266002 0.320769 -0.909038 0.00000 REMARK 350 BIOMT3 50 -0.002067 0.942820 0.333295 -0.00001 REMARK 350 BIOMT1 51 0.497545 0.290524 -0.817340 -0.00001 REMARK 350 BIOMT2 51 0.867434 -0.163958 0.469761 0.00002 REMARK 350 BIOMT3 51 0.002467 -0.942716 -0.333587 0.00000 REMARK 350 BIOMT1 52 0.155178 -0.733022 -0.662268 0.00000 REMARK 350 BIOMT2 52 0.557797 -0.488284 0.671149 0.00002 REMARK 350 BIOMT3 52 -0.815342 -0.473558 0.333106 -0.00001 REMARK 350 BIOMT1 53 -0.712349 -0.701821 -0.002470 -0.00002 REMARK 350 BIOMT2 53 0.232448 -0.239253 0.942723 0.00002 REMARK 350 BIOMT3 53 -0.662213 0.670974 0.333569 -0.00002 REMARK 350 BIOMT1 54 -0.906143 0.341009 0.250235 -0.00003 REMARK 350 BIOMT2 54 0.341009 0.238983 0.909176 0.00002 REMARK 350 BIOMT3 54 0.250235 0.909176 -0.332840 -0.00001 REMARK 350 BIOMT1 55 -0.158387 0.954312 -0.253382 -0.00003 REMARK 350 BIOMT2 55 0.733452 0.285518 0.616869 0.00002 REMARK 350 BIOMT3 55 0.661030 -0.088140 -0.745165 0.00000 REMARK 350 BIOMT1 56 -0.499993 -0.291944 0.815338 -0.00001 REMARK 350 BIOMT2 56 0.285766 0.833118 0.473553 0.00000 REMARK 350 BIOMT3 56 -0.817524 0.469769 -0.333125 -0.00002 REMARK 350 BIOMT1 57 -0.158387 0.733452 0.661030 -0.00002 REMARK 350 BIOMT2 57 0.954312 0.285518 -0.088140 0.00002 REMARK 350 BIOMT3 57 -0.253382 0.616869 -0.745165 -0.00002 REMARK 350 BIOMT1 58 0.710362 0.703836 0.000469 0.00000 REMARK 350 BIOMT2 58 0.703836 -0.710362 0.000193 0.00002 REMARK 350 BIOMT3 58 0.000469 0.000193 -1.000000 -0.00001 REMARK 350 BIOMT1 59 0.905673 -0.339864 -0.253473 0.00000 REMARK 350 BIOMT2 59 -0.119512 -0.778250 0.616478 0.00002 REMARK 350 BIOMT3 59 -0.406784 -0.528034 -0.745457 -0.00001 REMARK 350 BIOMT1 60 0.157632 -0.955291 0.250143 0.00000 REMARK 350 BIOMT2 60 -0.377893 0.175674 0.909030 0.00000 REMARK 350 BIOMT3 60 -0.912331 -0.237820 -0.333306 -0.00002 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 SER B 4 REMARK 465 GLY B 5 REMARK 465 THR B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 MET B 9 REMARK 465 THR B 10 REMARK 465 ARG B 11 REMARK 465 ALA B 12 REMARK 465 GLN B 13 REMARK 465 ARG B 14 REMARK 465 ARG B 15 REMARK 465 ALA B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 ARG B 19 REMARK 465 ARG B 20 REMARK 465 ASN B 21 REMARK 465 ARG B 22 REMARK 465 TRP B 23 REMARK 465 THR B 24 REMARK 465 ALA B 25 REMARK 465 ARG B 189 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 THR C 3 REMARK 465 SER C 4 REMARK 465 GLY C 5 REMARK 465 THR C 6 REMARK 465 GLY C 7 REMARK 465 LYS C 8 REMARK 465 MET C 9 REMARK 465 THR C 10 REMARK 465 ARG C 11 REMARK 465 ALA C 12 REMARK 465 GLN C 13 REMARK 465 ARG C 14 REMARK 465 ARG C 15 REMARK 465 ALA C 16 REMARK 465 ALA C 17 REMARK 465 ALA C 18 REMARK 465 ARG C 19 REMARK 465 ARG C 20 REMARK 465 ASN C 21 REMARK 465 ARG C 22 REMARK 465 TRP C 23 REMARK 465 THR C 24 REMARK 465 ALA C 25 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 GLY A 5 REMARK 465 THR A 6 REMARK 465 GLY A 7 REMARK 465 LYS A 8 REMARK 465 MET A 9 REMARK 465 THR A 10 REMARK 465 ARG A 11 REMARK 465 ALA A 12 REMARK 465 GLN A 13 REMARK 465 ARG A 14 REMARK 465 ARG A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 ARG A 19 REMARK 465 ARG A 20 REMARK 465 ASN A 21 REMARK 465 ARG A 22 REMARK 465 TRP A 23 REMARK 465 THR A 24 REMARK 465 ALA A 25 REMARK 465 ARG A 26 REMARK 465 VAL A 27 REMARK 465 GLN A 28 REMARK 465 PRO A 29 REMARK 465 VAL A 30 REMARK 465 ILE A 31 REMARK 465 VAL A 32 REMARK 465 GLU A 33 REMARK 465 PRO A 34 REMARK 465 LEU A 35 REMARK 465 ALA A 36 REMARK 465 ALA A 37 REMARK 465 GLY A 38 REMARK 465 GLN A 39 REMARK 465 GLY A 40 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 26 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 188 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG C 26 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 189 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 41 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 59 -169.84 -117.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-21260 RELATED DB: EMDB REMARK 900 ICOSAHEDRAL SYMMETRY RECONSTRUCTION OF BROME MOSAIC VIRUS (RNA 3+4) REMARK 900 RELATED ID: EMD-21261 RELATED DB: EMDB REMARK 900 ASYMMETRY RECONSTRUCTION OF BROME MOSAIC VIRUS (RNA 3 AND 4) REMARK 900 RELATED ID: EMD-21279 RELATED DB: EMDB REMARK 900 RNA-FOCUSED ASYMMETRY RECONSTRUCTION I REMARK 900 RELATED ID: EMD-21280 RELATED DB: EMDB REMARK 900 RNA-FOCUSED ASYMMETRY RECONSTRUCTION II REMARK 900 RELATED ID: EMD-21281 RELATED DB: EMDB REMARK 900 RNA-FOCUSED ASYMMETRY RECONSTRUCTION III OF BROME MOSAIC VIRUS (RNA REMARK 900 3+4) REMARK 900 RELATED ID: EMD-21282 RELATED DB: EMDB REMARK 900 RNA-FOCUSED ASYMMETRY RECONSTRUCTION IV OF BROME MOSAIC VIRUS (RNA REMARK 900 3+4) REMARK 900 RELATED ID: EMD-21283 RELATED DB: EMDB REMARK 900 2-FOLD SUB-PARTICLE RECONSTRUCTION I OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21284 RELATED DB: EMDB REMARK 900 2-FOLD SUB-PARTICLE RECONSTRUCTION II OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21285 RELATED DB: EMDB REMARK 900 2-FOLD SUB-PARTICLE RECONSTRUCTION III OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21286 RELATED DB: EMDB REMARK 900 2-FOLD SUB-PARTICLE RECONSTRUCTION IV OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21287 RELATED DB: EMDB REMARK 900 2-FOLD SUB-PARTICLE RECONSTRUCTION V OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21288 RELATED DB: EMDB REMARK 900 2-FOLD SUB-PARTICLE RECONSTRUCTION VI OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21289 RELATED DB: EMDB REMARK 900 3-FOLD SUB-PARTICLE RECONSTRUCTION I OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21290 RELATED DB: EMDB REMARK 900 3-FOLD SUB-PARTICLE RECONSTRUCTION II OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21291 RELATED DB: EMDB REMARK 900 3-FOLD SUB-PARTICLE RECONSTRUCTION III OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21292 RELATED DB: EMDB REMARK 900 3-FOLD SUB-PARTICLE RECONSTRUCTION IV OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21293 RELATED DB: EMDB REMARK 900 3-FOLD SUB-PARTICLE RECONSTRUCTION V OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21294 RELATED DB: EMDB REMARK 900 3-FOLD SUB-PARTICLE RECONSTRUCTION VI OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21295 RELATED DB: EMDB REMARK 900 5-FOLD SUB-PARTICLE RECONSTRUCTION I OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21296 RELATED DB: EMDB REMARK 900 5-FOLD SUB-PARTICLE RECONSTRUCTION II OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21297 RELATED DB: EMDB REMARK 900 5-FOLD SUB-PARTICLE RECONSTRUCTION III OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21298 RELATED DB: EMDB REMARK 900 5-FOLD SUB-PARTICLE RECONSTRUCTION IV OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21299 RELATED DB: EMDB REMARK 900 5-FOLD SUB-PARTICLE RECONSTRUCTION V OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) REMARK 900 RELATED ID: EMD-21300 RELATED DB: EMDB REMARK 900 5-FOLD SUB-PARTICLE RECONSTRUCTION VI OF BROME MOSAIC VIRUS (RNA 3 REMARK 900 AND 4) DBREF 6VOC B 1 189 UNP P03602 CAPSD_BMV 1 189 DBREF 6VOC C 1 189 UNP P03602 CAPSD_BMV 1 189 DBREF 6VOC A 1 189 UNP P03602 CAPSD_BMV 1 189 SEQRES 1 B 189 MET SER THR SER GLY THR GLY LYS MET THR ARG ALA GLN SEQRES 2 B 189 ARG ARG ALA ALA ALA ARG ARG ASN ARG TRP THR ALA ARG SEQRES 3 B 189 VAL GLN PRO VAL ILE VAL GLU PRO LEU ALA ALA GLY GLN SEQRES 4 B 189 GLY LYS ALA ILE LYS ALA ILE ALA GLY TYR SER ILE SER SEQRES 5 B 189 LYS TRP GLU ALA SER SER ASP ALA ILE THR ALA LYS ALA SEQRES 6 B 189 THR ASN ALA MET SER ILE THR LEU PRO HIS GLU LEU SER SEQRES 7 B 189 SER GLU LYS ASN LYS GLU LEU LYS VAL GLY ARG VAL LEU SEQRES 8 B 189 LEU TRP LEU GLY LEU LEU PRO SER VAL ALA GLY ARG ILE SEQRES 9 B 189 LYS ALA CYS VAL ALA GLU LYS GLN ALA GLN ALA GLU ALA SEQRES 10 B 189 ALA PHE GLN VAL ALA LEU ALA VAL ALA ASP SER SER LYS SEQRES 11 B 189 GLU VAL VAL ALA ALA MET TYR THR ASP ALA PHE ARG GLY SEQRES 12 B 189 ALA THR LEU GLY ASP LEU LEU ASN LEU GLN ILE TYR LEU SEQRES 13 B 189 TYR ALA SER GLU ALA VAL PRO ALA LYS ALA VAL VAL VAL SEQRES 14 B 189 HIS LEU GLU VAL GLU HIS VAL ARG PRO THR PHE ASP ASP SEQRES 15 B 189 PHE PHE THR PRO VAL TYR ARG SEQRES 1 C 189 MET SER THR SER GLY THR GLY LYS MET THR ARG ALA GLN SEQRES 2 C 189 ARG ARG ALA ALA ALA ARG ARG ASN ARG TRP THR ALA ARG SEQRES 3 C 189 VAL GLN PRO VAL ILE VAL GLU PRO LEU ALA ALA GLY GLN SEQRES 4 C 189 GLY LYS ALA ILE LYS ALA ILE ALA GLY TYR SER ILE SER SEQRES 5 C 189 LYS TRP GLU ALA SER SER ASP ALA ILE THR ALA LYS ALA SEQRES 6 C 189 THR ASN ALA MET SER ILE THR LEU PRO HIS GLU LEU SER SEQRES 7 C 189 SER GLU LYS ASN LYS GLU LEU LYS VAL GLY ARG VAL LEU SEQRES 8 C 189 LEU TRP LEU GLY LEU LEU PRO SER VAL ALA GLY ARG ILE SEQRES 9 C 189 LYS ALA CYS VAL ALA GLU LYS GLN ALA GLN ALA GLU ALA SEQRES 10 C 189 ALA PHE GLN VAL ALA LEU ALA VAL ALA ASP SER SER LYS SEQRES 11 C 189 GLU VAL VAL ALA ALA MET TYR THR ASP ALA PHE ARG GLY SEQRES 12 C 189 ALA THR LEU GLY ASP LEU LEU ASN LEU GLN ILE TYR LEU SEQRES 13 C 189 TYR ALA SER GLU ALA VAL PRO ALA LYS ALA VAL VAL VAL SEQRES 14 C 189 HIS LEU GLU VAL GLU HIS VAL ARG PRO THR PHE ASP ASP SEQRES 15 C 189 PHE PHE THR PRO VAL TYR ARG SEQRES 1 A 189 MET SER THR SER GLY THR GLY LYS MET THR ARG ALA GLN SEQRES 2 A 189 ARG ARG ALA ALA ALA ARG ARG ASN ARG TRP THR ALA ARG SEQRES 3 A 189 VAL GLN PRO VAL ILE VAL GLU PRO LEU ALA ALA GLY GLN SEQRES 4 A 189 GLY LYS ALA ILE LYS ALA ILE ALA GLY TYR SER ILE SER SEQRES 5 A 189 LYS TRP GLU ALA SER SER ASP ALA ILE THR ALA LYS ALA SEQRES 6 A 189 THR ASN ALA MET SER ILE THR LEU PRO HIS GLU LEU SER SEQRES 7 A 189 SER GLU LYS ASN LYS GLU LEU LYS VAL GLY ARG VAL LEU SEQRES 8 A 189 LEU TRP LEU GLY LEU LEU PRO SER VAL ALA GLY ARG ILE SEQRES 9 A 189 LYS ALA CYS VAL ALA GLU LYS GLN ALA GLN ALA GLU ALA SEQRES 10 A 189 ALA PHE GLN VAL ALA LEU ALA VAL ALA ASP SER SER LYS SEQRES 11 A 189 GLU VAL VAL ALA ALA MET TYR THR ASP ALA PHE ARG GLY SEQRES 12 A 189 ALA THR LEU GLY ASP LEU LEU ASN LEU GLN ILE TYR LEU SEQRES 13 A 189 TYR ALA SER GLU ALA VAL PRO ALA LYS ALA VAL VAL VAL SEQRES 14 A 189 HIS LEU GLU VAL GLU HIS VAL ARG PRO THR PHE ASP ASP SEQRES 15 A 189 PHE PHE THR PRO VAL TYR ARG HELIX 1 AA1 LYS B 81 LEU B 85 5 5 HELIX 2 AA2 ALA B 115 VAL B 121 5 7 HELIX 3 AA3 THR B 145 LEU B 150 1 6 HELIX 4 AA4 PRO C 74 SER C 78 5 5 HELIX 5 AA5 LYS C 81 LEU C 85 5 5 HELIX 6 AA6 ALA C 115 VAL C 121 5 7 HELIX 7 AA7 LEU C 146 LEU C 150 5 5 HELIX 8 AA8 LYS A 81 LEU A 85 5 5 HELIX 9 AA9 ALA A 117 ALA A 122 1 6 HELIX 10 AB1 THR A 145 LEU A 150 5 6 SHEET 1 AA1 4 TYR B 49 SER B 57 0 SHEET 2 AA1 4 VAL B 167 VAL B 176 -1 O VAL B 169 N ALA B 56 SHEET 3 AA1 4 VAL B 87 LEU B 96 -1 N GLY B 95 O VAL B 168 SHEET 4 AA1 4 ALA B 134 TYR B 137 -1 O TYR B 137 N VAL B 90 SHEET 1 AA2 4 ALA B 65 SER B 70 0 SHEET 2 AA2 4 LEU B 152 ALA B 158 -1 O LEU B 156 N ASN B 67 SHEET 3 AA2 4 ILE B 104 GLU B 110 -1 N CYS B 107 O TYR B 155 SHEET 4 AA2 4 ALA B 126 ASP B 127 -1 O ALA B 126 N ALA B 106 SHEET 1 AA3 4 TYR C 49 SER C 57 0 SHEET 2 AA3 4 VAL C 167 VAL C 176 -1 O LEU C 171 N TRP C 54 SHEET 3 AA3 4 VAL C 87 LEU C 96 -1 N GLY C 95 O VAL C 168 SHEET 4 AA3 4 ALA C 134 TYR C 137 -1 O ALA C 135 N LEU C 92 SHEET 1 AA4 4 ALA C 65 SER C 70 0 SHEET 2 AA4 4 LEU C 152 ALA C 158 -1 O ILE C 154 N MET C 69 SHEET 3 AA4 4 ILE C 104 GLU C 110 -1 N CYS C 107 O TYR C 155 SHEET 4 AA4 4 ALA C 126 ASP C 127 -1 O ALA C 126 N ALA C 106 SHEET 1 AA5 4 TYR A 49 SER A 57 0 SHEET 2 AA5 4 VAL A 167 VAL A 176 -1 O LEU A 171 N TRP A 54 SHEET 3 AA5 4 VAL A 87 LEU A 96 -1 N TRP A 93 O HIS A 170 SHEET 4 AA5 4 ALA A 135 TYR A 137 -1 O ALA A 135 N LEU A 92 SHEET 1 AA6 4 ALA A 65 SER A 70 0 SHEET 2 AA6 4 LEU A 152 ALA A 158 -1 O ILE A 154 N MET A 69 SHEET 3 AA6 4 ILE A 104 GLU A 110 -1 N CYS A 107 O TYR A 155 SHEET 4 AA6 4 ALA A 126 ASP A 127 -1 O ALA A 126 N ALA A 106 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000