HEADER IMMUNE SYSTEM 31-JAN-20 6VOR TITLE CRYSTAL STRUCTURE OF MACAQUE ANTI-HIV-1 ANTIBODY RM20E1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RM20E1 FAB HEAVY CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RM20E1 FAB LIGHT CHAIN; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 3 ORGANISM_TAXID: 9544; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 9 ORGANISM_TAXID: 9544; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HIV, ANTIBODY, NON-HUMAN PRIMATES, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.YUAN,I.A.WILSON REVDAT 2 11-OCT-23 6VOR 1 REMARK REVDAT 1 16-SEP-20 6VOR 0 JRNL AUTH C.A.COTTRELL,J.VAN SCHOOTEN,C.A.BOWMAN,M.YUAN,D.OYEN,M.SHIN, JRNL AUTH 2 R.MORPURGO,P.VAN DER WOUDE,M.VAN BREEMEN,J.L.TORRES,R.PATEL, JRNL AUTH 3 J.GROSS,L.M.SEWALL,J.COPPS,G.OZOROWSKI,B.NOGAL,D.SOK, JRNL AUTH 4 E.G.RAKASZ,C.LABRANCHE,V.VIGDOROVICH,S.CHRISTLEY, JRNL AUTH 5 D.G.CARNATHAN,D.N.SATHER,D.MONTEFIORI,G.SILVESTRI, JRNL AUTH 6 D.R.BURTON,J.P.MOORE,I.A.WILSON,R.W.SANDERS,A.B.WARD, JRNL AUTH 7 M.J.VAN GILS JRNL TITL MAPPING THE IMMUNOGENIC LANDSCAPE OF NEAR-NATIVE HIV-1 JRNL TITL 2 ENVELOPE TRIMERS IN NON-HUMAN PRIMATES. JRNL REF PLOS PATHOG. V. 16 08753 2020 JRNL REFN ESSN 1553-7374 JRNL PMID 32866207 JRNL DOI 10.1371/JOURNAL.PPAT.1008753 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 76.7 REMARK 3 NUMBER OF REFLECTIONS : 75965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.610 REMARK 3 FREE R VALUE TEST SET COUNT : 1982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.6280 - 4.4553 0.99 6784 180 0.1649 0.1848 REMARK 3 2 4.4553 - 3.5377 0.97 6698 187 0.1743 0.2064 REMARK 3 3 3.5377 - 3.0909 0.99 6820 183 0.2196 0.2589 REMARK 3 4 3.0909 - 2.8084 0.99 6830 189 0.2524 0.3072 REMARK 3 5 2.8084 - 2.6072 0.97 6679 178 0.2688 0.3041 REMARK 3 6 2.6072 - 2.4536 0.98 6796 183 0.2816 0.2804 REMARK 3 7 2.4536 - 2.3307 0.94 6475 174 0.2769 0.3247 REMARK 3 8 2.3307 - 2.2293 0.84 5758 152 0.3133 0.3585 REMARK 3 9 2.2293 - 2.1435 0.71 4913 125 0.3005 0.2894 REMARK 3 10 2.1435 - 2.0695 0.62 4271 125 0.3098 0.3195 REMARK 3 11 2.0695 - 2.0048 0.55 3834 99 0.3202 0.3694 REMARK 3 12 2.0048 - 1.9475 0.47 3232 79 0.3402 0.3507 REMARK 3 13 1.9475 - 1.8963 0.40 2717 74 0.3528 0.3715 REMARK 3 14 1.8963 - 1.8500 0.32 2176 54 0.4397 0.4168 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VOR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000246716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 142088 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.4 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5IT2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE RM20E1 FAB WAS CRYSTALLIZED FROM A REMARK 280 SOLUTION CONTAINING 6.3 MG/ML PROTEIN IN 1X TBS WITH A WELL REMARK 280 SOLUTION CONTAINING 0.1M GLYCINE, PH 10.5, 1.2M NAH2PO4, 0.8M REMARK 280 NA2HPO4, AND 0.2M LI2SO4, WITH 15% ETHYLENE GLYCOL SUPPLEMENTED REMARK 280 AS CRYOPROTECTANT., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 98A REMARK 465 THR A 98B REMARK 465 LYS A 129 REMARK 465 SER A 130 REMARK 465 THR A 131 REMARK 465 SER A 132 REMARK 465 GLY A 133 REMARK 465 CYS A 216 REMARK 465 ASP A 217 REMARK 465 CYS B 214 REMARK 465 SER C 127 REMARK 465 SER C 128 REMARK 465 LYS C 129 REMARK 465 SER C 130 REMARK 465 THR C 131 REMARK 465 SER C 132 REMARK 465 GLY C 133 REMARK 465 CYS C 216 REMARK 465 ASP C 217 REMARK 465 GLU D 213 REMARK 465 CYS D 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 362 O HOH A 366 1.89 REMARK 500 O HOH A 367 O HOH B 346 1.95 REMARK 500 O HOH C 453 O HOH C 461 2.02 REMARK 500 O HOH A 364 O HOH B 329 2.03 REMARK 500 OE1 GLU A 10 O HOH A 301 2.04 REMARK 500 OE1 GLN A 23 O HOH A 302 2.04 REMARK 500 O TYR B 32 O HOH B 301 2.05 REMARK 500 O GLY C 301 O HOH C 401 2.08 REMARK 500 OD2 ASP A 101 O HOH A 303 2.08 REMARK 500 OD2 ASP A 56 O HOH A 304 2.09 REMARK 500 O HOH B 370 O HOH B 383 2.09 REMARK 500 N GLY C 65 O HOH C 402 2.10 REMARK 500 OE1 GLN D 42 O HOH D 301 2.10 REMARK 500 O HOH D 374 O HOH D 384 2.10 REMARK 500 O HOH A 345 O HOH B 305 2.10 REMARK 500 OD2 ASP C 101 O HOH C 403 2.13 REMARK 500 OD1 ASP B 70 O HOH B 302 2.13 REMARK 500 NZ LYS A 117 O HOH A 305 2.13 REMARK 500 O HOH B 349 O HOH B 351 2.14 REMARK 500 OG SER A 179 O HOH A 306 2.15 REMARK 500 NE2 GLN B 90 O HOH B 303 2.16 REMARK 500 OE1 GLN C 39 O HOH C 404 2.16 REMARK 500 NZ LYS B 74 O HOH B 304 2.16 REMARK 500 O HOH C 428 O HOH C 464 2.17 REMARK 500 OG1 THR D 180 O HOH D 302 2.18 REMARK 500 O TYR C 27 O HOH C 405 2.18 REMARK 500 O TYR B 96 O HOH B 305 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N GLU A 1 O SER B 202 1545 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 127 -147.40 -118.31 REMARK 500 VAL B 51 -48.77 83.34 REMARK 500 THR B 92 -72.46 -46.74 REMARK 500 ASN B 138 71.34 56.83 REMARK 500 LYS B 169 -71.16 -72.14 REMARK 500 SER C 87 108.90 -58.83 REMARK 500 ILE C 98 -97.66 -108.47 REMARK 500 LEU C 99 -72.77 -103.73 REMARK 500 ASP C 144 60.15 68.29 REMARK 500 GLN D 50 60.16 33.25 REMARK 500 VAL D 51 -48.52 79.40 REMARK 500 SER D 52 -12.10 -142.44 REMARK 500 THR D 92 -71.58 -37.19 REMARK 500 ASN D 138 70.14 56.29 REMARK 500 LYS D 169 -73.40 -71.66 REMARK 500 LYS D 190 -60.56 -120.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 100F ASP A 101 -145.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY C 302 DBREF 6VOR A 1 217 PDB 6VOR 6VOR 1 217 DBREF 6VOR B 1 214 PDB 6VOR 6VOR 1 214 DBREF 6VOR C 1 217 PDB 6VOR 6VOR 1 217 DBREF 6VOR D 1 214 PDB 6VOR 6VOR 1 214 SEQRES 1 A 227 GLU VAL GLN LEU VAL GLN SER GLU ALA GLU VAL LYS ARG SEQRES 2 A 227 PRO GLY GLU SER LEU LYS ILE SER CYS GLN THR SER GLY SEQRES 3 A 227 TYR ASN PHE PRO ASN TYR TRP ILE THR TRP VAL ARG GLN SEQRES 4 A 227 MET PRO GLY LYS GLY LEU GLU TRP MET GLY THR ILE ASP SEQRES 5 A 227 PRO ARG ASP SER ASP THR LYS TYR SER PRO SER PHE GLN SEQRES 6 A 227 GLY GLN VAL THR ILE SER ALA ASP LYS SER ILE ASN THR SEQRES 7 A 227 ALA TYR LEU GLN TRP THR SER LEU ARG ALA SER ASP SER SEQRES 8 A 227 ALA THR TYR TYR CYS VAL MET TRP VAL TYR ILE LEU THR SEQRES 9 A 227 THR GLY ASN ILE TRP VAL ASP VAL TRP GLY PRO GLY VAL SEQRES 10 A 227 LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER SEQRES 11 A 227 VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY SEQRES 12 A 227 GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE SEQRES 13 A 227 PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 A 227 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 A 227 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 A 227 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 A 227 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL SEQRES 18 A 227 GLU PRO LYS SER CYS ASP SEQRES 1 B 219 ASP VAL VAL MET THR GLN SER PRO LEU SER LEU PRO ILE SEQRES 2 B 219 THR PRO GLY GLN PRO ALA SER ILE SER CYS ARG SER SER SEQRES 3 B 219 GLN SER LEU VAL HIS ASN ASN GLY ASN THR TYR LEU THR SEQRES 4 B 219 TRP TYR GLN GLN ARG PRO GLY GLN PRO PRO ARG ARG LEU SEQRES 5 B 219 ILE TYR GLN VAL SER ASN ARG ASP SER GLY VAL PRO ASP SEQRES 6 B 219 ARG PHE ILE GLY SER GLY ALA GLY THR ASP PHE THR LEU SEQRES 7 B 219 LYS ILE SER ARG VAL GLU SER GLU ASP VAL GLY ILE TYR SEQRES 8 B 219 TYR CYS GLY GLN ILE THR ASP PHE PRO TYR SER PHE GLY SEQRES 9 B 219 GLN GLY THR LYS VAL ASP ILE LYS ARG THR VAL ALA ALA SEQRES 10 B 219 PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU SEQRES 11 B 219 LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN SEQRES 12 B 219 PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP SEQRES 13 B 219 ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR SEQRES 14 B 219 GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER SEQRES 15 B 219 THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS SEQRES 16 B 219 VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER SEQRES 17 B 219 PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 C 227 GLU VAL GLN LEU VAL GLN SER GLU ALA GLU VAL LYS ARG SEQRES 2 C 227 PRO GLY GLU SER LEU LYS ILE SER CYS GLN THR SER GLY SEQRES 3 C 227 TYR ASN PHE PRO ASN TYR TRP ILE THR TRP VAL ARG GLN SEQRES 4 C 227 MET PRO GLY LYS GLY LEU GLU TRP MET GLY THR ILE ASP SEQRES 5 C 227 PRO ARG ASP SER ASP THR LYS TYR SER PRO SER PHE GLN SEQRES 6 C 227 GLY GLN VAL THR ILE SER ALA ASP LYS SER ILE ASN THR SEQRES 7 C 227 ALA TYR LEU GLN TRP THR SER LEU ARG ALA SER ASP SER SEQRES 8 C 227 ALA THR TYR TYR CYS VAL MET TRP VAL TYR ILE LEU THR SEQRES 9 C 227 THR GLY ASN ILE TRP VAL ASP VAL TRP GLY PRO GLY VAL SEQRES 10 C 227 LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER SEQRES 11 C 227 VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY SEQRES 12 C 227 GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE SEQRES 13 C 227 PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 C 227 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 C 227 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 C 227 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 C 227 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL SEQRES 18 C 227 GLU PRO LYS SER CYS ASP SEQRES 1 D 219 ASP VAL VAL MET THR GLN SER PRO LEU SER LEU PRO ILE SEQRES 2 D 219 THR PRO GLY GLN PRO ALA SER ILE SER CYS ARG SER SER SEQRES 3 D 219 GLN SER LEU VAL HIS ASN ASN GLY ASN THR TYR LEU THR SEQRES 4 D 219 TRP TYR GLN GLN ARG PRO GLY GLN PRO PRO ARG ARG LEU SEQRES 5 D 219 ILE TYR GLN VAL SER ASN ARG ASP SER GLY VAL PRO ASP SEQRES 6 D 219 ARG PHE ILE GLY SER GLY ALA GLY THR ASP PHE THR LEU SEQRES 7 D 219 LYS ILE SER ARG VAL GLU SER GLU ASP VAL GLY ILE TYR SEQRES 8 D 219 TYR CYS GLY GLN ILE THR ASP PHE PRO TYR SER PHE GLY SEQRES 9 D 219 GLN GLY THR LYS VAL ASP ILE LYS ARG THR VAL ALA ALA SEQRES 10 D 219 PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU SEQRES 11 D 219 LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN SEQRES 12 D 219 PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP SEQRES 13 D 219 ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR SEQRES 14 D 219 GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER SEQRES 15 D 219 THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS SEQRES 16 D 219 VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER SEQRES 17 D 219 PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS HET GLY C 301 5 HET GLY C 302 5 HETNAM GLY GLYCINE FORMUL 5 GLY 2(C2 H5 N O2) FORMUL 7 HOH *320(H2 O) HELIX 1 AA1 LYS A 73 ILE A 75 5 3 HELIX 2 AA2 ARG A 83 SER A 87 5 5 HELIX 3 AA3 SER A 156 ALA A 158 5 3 HELIX 4 AA4 SER A 187 GLN A 192 1 6 HELIX 5 AA5 LYS A 201 ASN A 204 5 4 HELIX 6 AA6 GLU B 79 VAL B 83 5 5 HELIX 7 AA7 SER B 121 SER B 127 1 7 HELIX 8 AA8 LYS B 183 LYS B 188 1 6 HELIX 9 AA9 LYS C 73 ILE C 75 5 3 HELIX 10 AB1 ARG C 83 SER C 87 5 5 HELIX 11 AB2 SER C 156 ALA C 158 5 3 HELIX 12 AB3 SER C 187 GLN C 192 1 6 HELIX 13 AB4 LYS C 201 ASN C 204 5 4 HELIX 14 AB5 GLU D 79 VAL D 83 5 5 HELIX 15 AB6 SER D 121 LYS D 126 1 6 HELIX 16 AB7 LYS D 183 LYS D 188 1 6 SHEET 1 AA1 4 GLN A 3 GLN A 6 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O GLN A 23 N VAL A 5 SHEET 3 AA1 4 THR A 77 TRP A 82 -1 O ALA A 78 N CYS A 22 SHEET 4 AA1 4 VAL A 67 ASP A 72 -1 N ASP A 72 O THR A 77 SHEET 1 AA2 6 GLU A 10 LYS A 12 0 SHEET 2 AA2 6 VAL A 107 VAL A 111 1 O THR A 110 N LYS A 12 SHEET 3 AA2 6 ALA A 88 TYR A 97 -1 N ALA A 88 O VAL A 109 SHEET 4 AA2 6 TYR A 32 GLN A 39 -1 N VAL A 37 O TYR A 91 SHEET 5 AA2 6 GLU A 46 ASP A 52 -1 O ILE A 51 N ILE A 34 SHEET 6 AA2 6 ASP A 56 TYR A 59 -1 O ASP A 56 N ASP A 52 SHEET 1 AA3 4 GLU A 10 LYS A 12 0 SHEET 2 AA3 4 VAL A 107 VAL A 111 1 O THR A 110 N LYS A 12 SHEET 3 AA3 4 ALA A 88 TYR A 97 -1 N ALA A 88 O VAL A 109 SHEET 4 AA3 4 TRP A 100E TRP A 103 -1 O VAL A 100F N VAL A 96 SHEET 1 AA4 4 SER A 120 LEU A 124 0 SHEET 2 AA4 4 THR A 135 TYR A 145 -1 O GLY A 139 N LEU A 124 SHEET 3 AA4 4 TYR A 176 PRO A 185 -1 O VAL A 184 N ALA A 136 SHEET 4 AA4 4 VAL A 163 THR A 165 -1 N HIS A 164 O VAL A 181 SHEET 1 AA5 4 SER A 120 LEU A 124 0 SHEET 2 AA5 4 THR A 135 TYR A 145 -1 O GLY A 139 N LEU A 124 SHEET 3 AA5 4 TYR A 176 PRO A 185 -1 O VAL A 184 N ALA A 136 SHEET 4 AA5 4 VAL A 169 LEU A 170 -1 N VAL A 169 O SER A 177 SHEET 1 AA6 3 THR A 151 TRP A 154 0 SHEET 2 AA6 3 ILE A 195 HIS A 200 -1 O ASN A 197 N SER A 153 SHEET 3 AA6 3 THR A 205 ARG A 210 -1 O VAL A 207 N VAL A 198 SHEET 1 AA7 4 MET B 4 SER B 7 0 SHEET 2 AA7 4 ALA B 19 SER B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AA7 4 ASP B 70 ILE B 75 -1 O LEU B 73 N ILE B 21 SHEET 4 AA7 4 PHE B 62 ALA B 67 -1 N ILE B 63 O LYS B 74 SHEET 1 AA8 6 SER B 10 ILE B 13 0 SHEET 2 AA8 6 THR B 102 ILE B 106 1 O ASP B 105 N ILE B 13 SHEET 3 AA8 6 GLY B 84 GLN B 90 -1 N GLY B 84 O VAL B 104 SHEET 4 AA8 6 LEU B 33 GLN B 38 -1 N TYR B 36 O TYR B 87 SHEET 5 AA8 6 ARG B 45 TYR B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 AA8 6 ASN B 53 ARG B 54 -1 O ASN B 53 N TYR B 49 SHEET 1 AA9 4 SER B 10 ILE B 13 0 SHEET 2 AA9 4 THR B 102 ILE B 106 1 O ASP B 105 N ILE B 13 SHEET 3 AA9 4 GLY B 84 GLN B 90 -1 N GLY B 84 O VAL B 104 SHEET 4 AA9 4 SER B 97 PHE B 98 -1 O SER B 97 N GLN B 90 SHEET 1 AB1 4 SER B 114 PHE B 118 0 SHEET 2 AB1 4 THR B 129 PHE B 139 -1 O VAL B 133 N PHE B 118 SHEET 3 AB1 4 TYR B 173 SER B 182 -1 O LEU B 175 N LEU B 136 SHEET 4 AB1 4 SER B 159 VAL B 163 -1 N GLN B 160 O THR B 178 SHEET 1 AB2 3 LYS B 145 VAL B 150 0 SHEET 2 AB2 3 VAL B 191 THR B 197 -1 O GLU B 195 N GLN B 147 SHEET 3 AB2 3 VAL B 205 ASN B 210 -1 O PHE B 209 N TYR B 192 SHEET 1 AB3 4 GLN C 3 GLN C 6 0 SHEET 2 AB3 4 LEU C 18 SER C 25 -1 O SER C 25 N GLN C 3 SHEET 3 AB3 4 THR C 77 TRP C 82 -1 O ALA C 78 N CYS C 22 SHEET 4 AB3 4 VAL C 67 ASP C 72 -1 N SER C 70 O TYR C 79 SHEET 1 AB4 6 GLU C 10 LYS C 12 0 SHEET 2 AB4 6 VAL C 107 VAL C 111 1 O THR C 110 N LYS C 12 SHEET 3 AB4 6 ALA C 88 TYR C 97 -1 N ALA C 88 O VAL C 109 SHEET 4 AB4 6 TYR C 32 GLN C 39 -1 N VAL C 37 O TYR C 91 SHEET 5 AB4 6 GLU C 46 ASP C 52 -1 O ILE C 51 N ILE C 34 SHEET 6 AB4 6 ASP C 56 TYR C 59 -1 O ASP C 56 N ASP C 52 SHEET 1 AB5 4 GLU C 10 LYS C 12 0 SHEET 2 AB5 4 VAL C 107 VAL C 111 1 O THR C 110 N LYS C 12 SHEET 3 AB5 4 ALA C 88 TYR C 97 -1 N ALA C 88 O VAL C 109 SHEET 4 AB5 4 ILE C 100D TRP C 103 -1 O VAL C 102 N MET C 94 SHEET 1 AB6 4 SER C 120 LEU C 124 0 SHEET 2 AB6 4 THR C 135 TYR C 145 -1 O GLY C 139 N LEU C 124 SHEET 3 AB6 4 TYR C 176 PRO C 185 -1 O VAL C 184 N ALA C 136 SHEET 4 AB6 4 VAL C 163 THR C 165 -1 N HIS C 164 O VAL C 181 SHEET 1 AB7 4 SER C 120 LEU C 124 0 SHEET 2 AB7 4 THR C 135 TYR C 145 -1 O GLY C 139 N LEU C 124 SHEET 3 AB7 4 TYR C 176 PRO C 185 -1 O VAL C 184 N ALA C 136 SHEET 4 AB7 4 VAL C 169 LEU C 170 -1 N VAL C 169 O SER C 177 SHEET 1 AB8 3 THR C 151 TRP C 154 0 SHEET 2 AB8 3 TYR C 194 HIS C 200 -1 O ASN C 197 N SER C 153 SHEET 3 AB8 3 THR C 205 VAL C 211 -1 O VAL C 207 N VAL C 198 SHEET 1 AB9 4 MET D 4 SER D 7 0 SHEET 2 AB9 4 ALA D 19 SER D 25 -1 O ARG D 24 N THR D 5 SHEET 3 AB9 4 ASP D 70 ILE D 75 -1 O LEU D 73 N ILE D 21 SHEET 4 AB9 4 PHE D 62 ALA D 67 -1 N ILE D 63 O LYS D 74 SHEET 1 AC1 6 SER D 10 ILE D 13 0 SHEET 2 AC1 6 THR D 102 ILE D 106 1 O LYS D 103 N LEU D 11 SHEET 3 AC1 6 GLY D 84 GLN D 90 -1 N GLY D 84 O VAL D 104 SHEET 4 AC1 6 LEU D 33 GLN D 38 -1 N TYR D 36 O TYR D 87 SHEET 5 AC1 6 ARG D 45 TYR D 49 -1 O LEU D 47 N TRP D 35 SHEET 6 AC1 6 ASN D 53 ARG D 54 -1 O ASN D 53 N TYR D 49 SHEET 1 AC2 4 SER D 10 ILE D 13 0 SHEET 2 AC2 4 THR D 102 ILE D 106 1 O LYS D 103 N LEU D 11 SHEET 3 AC2 4 GLY D 84 GLN D 90 -1 N GLY D 84 O VAL D 104 SHEET 4 AC2 4 SER D 97 PHE D 98 -1 O SER D 97 N GLN D 90 SHEET 1 AC3 4 SER D 114 PHE D 118 0 SHEET 2 AC3 4 THR D 129 PHE D 139 -1 O VAL D 133 N PHE D 118 SHEET 3 AC3 4 TYR D 173 SER D 182 -1 O LEU D 175 N LEU D 136 SHEET 4 AC3 4 SER D 159 VAL D 163 -1 N GLN D 160 O THR D 178 SHEET 1 AC4 3 LYS D 145 VAL D 150 0 SHEET 2 AC4 3 VAL D 191 THR D 197 -1 O GLU D 195 N GLN D 147 SHEET 3 AC4 3 VAL D 205 ASN D 210 -1 O VAL D 205 N VAL D 196 SSBOND 1 CYS A 22 CYS A 92 1555 1555 2.06 SSBOND 2 CYS A 140 CYS A 196 1555 1555 2.04 SSBOND 3 CYS B 23 CYS B 88 1555 1555 2.08 SSBOND 4 CYS B 134 CYS B 194 1555 1555 2.07 SSBOND 5 CYS C 22 CYS C 92 1555 1555 2.05 SSBOND 6 CYS C 140 CYS C 196 1555 1555 2.03 SSBOND 7 CYS D 23 CYS D 88 1555 1555 2.07 SSBOND 8 CYS D 134 CYS D 194 1555 1555 2.08 CISPEP 1 PHE A 146 PRO A 147 0 -0.39 CISPEP 2 GLU A 148 PRO A 149 0 2.52 CISPEP 3 SER B 7 PRO B 8 0 -2.71 CISPEP 4 PHE B 94 PRO B 95 0 2.30 CISPEP 5 TYR B 140 PRO B 141 0 -1.32 CISPEP 6 PHE C 146 PRO C 147 0 -0.13 CISPEP 7 GLU C 148 PRO C 149 0 0.47 CISPEP 8 SER D 7 PRO D 8 0 -0.79 CISPEP 9 PHE D 94 PRO D 95 0 1.02 CISPEP 10 TYR D 140 PRO D 141 0 0.20 SITE 1 AC1 7 ARG A 38 SER A 85 ASP A 86 ARG C 83 SITE 2 AC1 7 SER C 85 GLY C 302 HOH C 401 SITE 1 AC2 7 ARG A 83 SER A 85 ARG C 38 GLN C 66 SITE 2 AC2 7 SER C 85 ASP C 86 GLY C 301 CRYST1 57.369 57.741 92.745 98.74 94.05 97.83 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017431 0.002396 0.001649 0.00000 SCALE2 0.000000 0.017482 0.002898 0.00000 SCALE3 0.000000 0.000000 0.010957 0.00000