HEADER IMMUNE SYSTEM 31-JAN-20 6VOS TITLE CRYSTAL STRUCTURE OF MACAQUE ANTI-HIV-1 ANTIBODY RM20J COMPND MOL_ID: 1; COMPND 2 MOLECULE: RM20J FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RM20J FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 3 ORGANISM_TAXID: 9544; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 9 ORGANISM_TAXID: 9544; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HIV, ANTIBODY, NON-HUMAN PRIMATES, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.YUAN,I.A.WILSON REVDAT 2 11-OCT-23 6VOS 1 REMARK REVDAT 1 16-SEP-20 6VOS 0 JRNL AUTH C.A.COTTRELL,J.VAN SCHOOTEN,C.A.BOWMAN,M.YUAN,D.OYEN,M.SHIN, JRNL AUTH 2 R.MORPURGO,P.VAN DER WOUDE,M.VAN BREEMEN,J.L.TORRES,R.PATEL, JRNL AUTH 3 J.GROSS,L.M.SEWALL,J.COPPS,G.OZOROWSKI,B.NOGAL,D.SOK, JRNL AUTH 4 E.G.RAKASZ,C.LABRANCHE,V.VIGDOROVICH,S.CHRISTLEY, JRNL AUTH 5 D.G.CARNATHAN,D.N.SATHER,D.MONTEFIORI,G.SILVESTRI, JRNL AUTH 6 D.R.BURTON,J.P.MOORE,I.A.WILSON,R.W.SANDERS,A.B.WARD, JRNL AUTH 7 M.J.VAN GILS JRNL TITL MAPPING THE IMMUNOGENIC LANDSCAPE OF NEAR-NATIVE HIV-1 JRNL TITL 2 ENVELOPE TRIMERS IN NON-HUMAN PRIMATES. JRNL REF PLOS PATHOG. V. 16 08753 2020 JRNL REFN ESSN 1553-7374 JRNL PMID 32866207 JRNL DOI 10.1371/JOURNAL.PPAT.1008753 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 39954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8670 - 5.5351 0.99 2918 153 0.1777 0.1878 REMARK 3 2 5.5351 - 4.3959 1.00 2776 148 0.1431 0.1679 REMARK 3 3 4.3959 - 3.8410 1.00 2739 143 0.1509 0.1947 REMARK 3 4 3.8410 - 3.4901 1.00 2737 145 0.1728 0.2004 REMARK 3 5 3.4901 - 3.2401 1.00 2716 142 0.1911 0.2355 REMARK 3 6 3.2401 - 3.0492 1.00 2702 143 0.1916 0.1941 REMARK 3 7 3.0492 - 2.8966 1.00 2681 141 0.2027 0.2163 REMARK 3 8 2.8966 - 2.7705 1.00 2685 141 0.2036 0.2477 REMARK 3 9 2.7705 - 2.6639 1.00 2690 142 0.2183 0.2898 REMARK 3 10 2.6639 - 2.5720 1.00 2668 141 0.2265 0.2755 REMARK 3 11 2.5720 - 2.4916 1.00 2674 141 0.2249 0.2937 REMARK 3 12 2.4916 - 2.4204 1.00 2676 140 0.2470 0.2861 REMARK 3 13 2.4204 - 2.3567 1.00 2673 141 0.2818 0.3822 REMARK 3 14 2.3567 - 2.2992 0.99 2620 138 0.3332 0.3930 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3456 REMARK 3 ANGLE : 0.949 4693 REMARK 3 CHIRALITY : 0.054 529 REMARK 3 PLANARITY : 0.006 594 REMARK 3 DIHEDRAL : 10.537 2769 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN H AND RESID 1:17) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5366 -40.3321 6.7962 REMARK 3 T TENSOR REMARK 3 T11: 0.5706 T22: 0.5324 REMARK 3 T33: 0.6536 T12: -0.1306 REMARK 3 T13: -0.1457 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 1.4742 L22: 6.6563 REMARK 3 L33: 2.4110 L12: -1.7600 REMARK 3 L13: 1.2100 L23: -3.8871 REMARK 3 S TENSOR REMARK 3 S11: 0.2001 S12: -0.2468 S13: 0.3053 REMARK 3 S21: 0.7828 S22: -0.1779 S23: -0.1613 REMARK 3 S31: -0.8162 S32: 0.2284 S33: -0.0282 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN H AND RESID 18:81) REMARK 3 ORIGIN FOR THE GROUP (A): 47.0247 -50.5610 3.8452 REMARK 3 T TENSOR REMARK 3 T11: 0.4425 T22: 0.4059 REMARK 3 T33: 0.4991 T12: -0.0210 REMARK 3 T13: -0.1236 T23: 0.0721 REMARK 3 L TENSOR REMARK 3 L11: 2.9255 L22: 5.4399 REMARK 3 L33: 3.3417 L12: 0.9745 REMARK 3 L13: -1.6099 L23: -0.1609 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: -0.0656 S13: 0.3429 REMARK 3 S21: -0.0074 S22: -0.0841 S23: -0.1915 REMARK 3 S31: -0.1487 S32: 0.2458 S33: 0.1164 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN H AND RESID 82:118) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0807 -45.4484 2.5332 REMARK 3 T TENSOR REMARK 3 T11: 0.4533 T22: 0.4539 REMARK 3 T33: 0.5562 T12: -0.0235 REMARK 3 T13: -0.1192 T23: 0.0977 REMARK 3 L TENSOR REMARK 3 L11: 2.2987 L22: 4.0464 REMARK 3 L33: 2.3415 L12: 1.2879 REMARK 3 L13: -0.9613 L23: -1.5021 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: 0.0382 S13: 0.4304 REMARK 3 S21: 0.1779 S22: 0.0095 S23: 0.0037 REMARK 3 S31: -0.1227 S32: 0.0028 S33: -0.0082 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN H AND RESID 119:213) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9095 -19.8341 -5.8069 REMARK 3 T TENSOR REMARK 3 T11: 0.6688 T22: 0.5220 REMARK 3 T33: 0.4370 T12: 0.0542 REMARK 3 T13: -0.1254 T23: -0.0526 REMARK 3 L TENSOR REMARK 3 L11: 6.0109 L22: 3.4218 REMARK 3 L33: 1.3504 L12: -1.5784 REMARK 3 L13: -0.4939 L23: -0.0219 REMARK 3 S TENSOR REMARK 3 S11: -0.1804 S12: -0.3651 S13: 0.1887 REMARK 3 S21: 0.3540 S22: -0.0408 S23: -0.1134 REMARK 3 S31: -0.3005 S32: -0.0616 S33: 0.2179 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN H AND RESID 214:222) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1758 -10.2044 -15.6963 REMARK 3 T TENSOR REMARK 3 T11: 0.8148 T22: 0.5816 REMARK 3 T33: 0.5729 T12: 0.1607 REMARK 3 T13: -0.1118 T23: -0.1565 REMARK 3 L TENSOR REMARK 3 L11: 2.4336 L22: 4.1808 REMARK 3 L33: 6.1631 L12: 0.7027 REMARK 3 L13: -0.1633 L23: -5.0004 REMARK 3 S TENSOR REMARK 3 S11: -0.9019 S12: -0.1679 S13: 0.3693 REMARK 3 S21: 0.6530 S22: 0.0346 S23: 0.0819 REMARK 3 S31: -1.6430 S32: -0.9172 S33: 0.9419 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN L AND RESID 1:26) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5544 -55.6842 -4.5011 REMARK 3 T TENSOR REMARK 3 T11: 0.4760 T22: 0.5480 REMARK 3 T33: 0.5962 T12: -0.0030 REMARK 3 T13: -0.0959 T23: 0.1008 REMARK 3 L TENSOR REMARK 3 L11: 2.5881 L22: 1.4399 REMARK 3 L33: 2.3370 L12: 0.2005 REMARK 3 L13: -2.2819 L23: -0.0995 REMARK 3 S TENSOR REMARK 3 S11: 0.1923 S12: 0.3314 S13: 0.3690 REMARK 3 S21: -0.1654 S22: 0.0412 S23: 0.3784 REMARK 3 S31: 0.0195 S32: -0.4123 S33: -0.2036 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN L AND RESID 27:106) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6793 -56.6067 3.0891 REMARK 3 T TENSOR REMARK 3 T11: 0.4414 T22: 0.4073 REMARK 3 T33: 0.4668 T12: -0.0075 REMARK 3 T13: -0.0619 T23: 0.0896 REMARK 3 L TENSOR REMARK 3 L11: 4.9558 L22: 2.1683 REMARK 3 L33: 2.9394 L12: -1.1242 REMARK 3 L13: -1.0897 L23: 0.8080 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: 0.0552 S13: 0.2543 REMARK 3 S21: 0.0435 S22: 0.1119 S23: 0.0871 REMARK 3 S31: -0.0206 S32: -0.2013 S33: -0.1170 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN L AND RESID 107:147) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0832 -29.5274 -14.1200 REMARK 3 T TENSOR REMARK 3 T11: 0.4795 T22: 0.4680 REMARK 3 T33: 0.3908 T12: 0.0315 REMARK 3 T13: -0.1319 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 5.0911 L22: 5.9020 REMARK 3 L33: 4.7308 L12: 2.3992 REMARK 3 L13: -2.5692 L23: -4.2154 REMARK 3 S TENSOR REMARK 3 S11: 0.1887 S12: -0.3392 S13: -0.0862 REMARK 3 S21: 0.3800 S22: -0.1843 S23: 0.1231 REMARK 3 S31: -0.2858 S32: 0.2037 S33: 0.0448 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN L AND RESID 148:161) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7363 -32.8801 -23.9842 REMARK 3 T TENSOR REMARK 3 T11: 0.5906 T22: 0.5002 REMARK 3 T33: 0.6451 T12: 0.0878 REMARK 3 T13: -0.1047 T23: -0.0562 REMARK 3 L TENSOR REMARK 3 L11: 6.2948 L22: 7.3730 REMARK 3 L33: 2.1068 L12: -1.4517 REMARK 3 L13: 2.8485 L23: -3.0442 REMARK 3 S TENSOR REMARK 3 S11: 0.2970 S12: 0.0932 S13: -0.6903 REMARK 3 S21: -0.4311 S22: -0.1583 S23: 0.0090 REMARK 3 S31: 0.7256 S32: 0.2298 S33: -0.2220 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN L AND RESID 162:214) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9074 -29.8083 -18.3112 REMARK 3 T TENSOR REMARK 3 T11: 0.4992 T22: 0.4408 REMARK 3 T33: 0.4835 T12: 0.0304 REMARK 3 T13: -0.0962 T23: -0.0673 REMARK 3 L TENSOR REMARK 3 L11: 3.1416 L22: 3.2356 REMARK 3 L33: 3.2479 L12: 1.8426 REMARK 3 L13: -2.2858 L23: -3.0619 REMARK 3 S TENSOR REMARK 3 S11: -0.0565 S12: -0.1745 S13: -0.1768 REMARK 3 S21: -0.0793 S22: -0.0023 S23: -0.0059 REMARK 3 S31: 0.0111 S32: 0.1575 S33: 0.0626 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VOS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000246790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03322 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40057 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.299 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 17.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6VOR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE RM20J FAB WAS CRYSTALLIZED FROM A REMARK 280 SOLUTION CONTAINING 10 MG/ML PROTEIN IN 1X TBS WITH A WELL REMARK 280 SOLUTION CONTAINING 0.1M MES, PH 6.0, 5% PEG3000 AND 40% PEG400, REMARK 280 WITH NO CRYOPROTECTANT SUPPLEMENTED., VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.52000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 55.63000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 55.63000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.78000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 55.63000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 55.63000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.26000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 55.63000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.63000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 105.78000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 55.63000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.63000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.26000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.52000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 409 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO H 131 O HOH H 401 2.11 REMARK 500 OD2 ASP L 105 OH TYR L 173 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO L 95 C - N - CA ANGL. DEV. = 13.5 DEGREES REMARK 500 PRO L 95 CA - N - CD ANGL. DEV. = -25.4 DEGREES REMARK 500 PRO L 95 CB - CA - C ANGL. DEV. = 17.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 15 -3.73 73.60 REMARK 500 THR H 102 -61.53 68.97 REMARK 500 THR L 30 -120.98 44.94 REMARK 500 ALA L 51 -26.35 69.36 REMARK 500 SER L 52 -13.55 -141.43 REMARK 500 ALA L 84 -177.48 -171.62 REMARK 500 PRO L 95 73.88 67.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR L 94 PRO L 95 -148.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR L 94 -14.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 2PE H 302 REMARK 610 P6G H 303 REMARK 610 PE8 L 301 REMARK 610 2PE L 302 REMARK 610 2PE L 303 REMARK 610 P6G L 304 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAM H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2PE H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2PE L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2PE L 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G L 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6VOR RELATED DB: PDB DBREF 6VOS H 1 222 PDB 6VOS 6VOS 1 222 DBREF 6VOS L 1 214 PDB 6VOS 6VOS 1 214 SEQRES 1 H 222 GLN VAL GLN LEU GLN GLU SER GLY PRO ALA VAL VAL GLN SEQRES 2 H 222 PRO SER GLU THR LEU SER LEU THR CYS ALA VAL SER GLY SEQRES 3 H 222 GLY SER ILE SER GLY GLY TYR GLY TRP THR TRP ILE ARG SEQRES 4 H 222 GLN ALA PRO GLY LYS ALA LEU GLU TRP ILE GLY ASN ILE SEQRES 5 H 222 TYR GLY HIS SER GLY SER THR ASN TYR LYS SER SER LEU SEQRES 6 H 222 LYS ARG ARG LEU THR ILE SER THR ASP THR SER LYS ASN SEQRES 7 H 222 GLN PHE SER LEU LYS LEU THR SER VAL THR ALA ALA ASP SEQRES 8 H 222 THR ALA VAL TYR TYR CYS ALA ARG TRP SER THR ALA ASP SEQRES 9 H 222 PHE ASP TYR TRP GLY GLN GLY VAL LEU VAL THR VAL SER SEQRES 10 H 222 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 H 222 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 H 222 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 222 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 222 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 222 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 222 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 222 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 18 H 222 ASP SEQRES 1 L 214 ASP ILE VAL MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP THR VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLN ASP ILE THR ASN ASP LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS ALA LEU ILE TYR TYR ALA SER SEQRES 5 L 214 ASN LEU GLU SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY ALA GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA LEU TYR TYR CYS GLN GLN HIS SEQRES 8 L 214 ASN ASN TYR PRO LEU THR PHE GLY PRO GLY THR LYS VAL SEQRES 9 L 214 ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET TAM H 301 11 HET 2PE H 302 7 HET P6G H 303 6 HET PE8 L 301 7 HET 2PE L 302 17 HET 2PE L 303 7 HET P6G L 304 7 HETNAM TAM TRIS(HYDROXYETHYL)AMINOMETHANE HETNAM 2PE NONAETHYLENE GLYCOL HETNAM P6G HEXAETHYLENE GLYCOL HETNAM PE8 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 3 TAM C7 H17 N O3 FORMUL 4 2PE 3(C18 H38 O10) FORMUL 5 P6G 2(C12 H26 O7) FORMUL 6 PE8 C16 H34 O9 FORMUL 10 HOH *224(H2 O) HELIX 1 AA1 SER H 63 LYS H 66 5 4 HELIX 2 AA2 THR H 88 THR H 92 5 5 HELIX 3 AA3 SER H 133 SER H 137 5 5 HELIX 4 AA4 SER H 161 ALA H 163 5 3 HELIX 5 AA5 SER H 192 THR H 196 5 5 HELIX 6 AA6 LYS H 206 ASN H 209 5 4 HELIX 7 AA7 GLN L 79 PHE L 83 5 5 HELIX 8 AA8 SER L 121 GLY L 128 1 8 HELIX 9 AA9 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O THR H 21 N SER H 7 SHEET 3 AA1 4 GLN H 79 LEU H 84 -1 O PHE H 80 N CYS H 22 SHEET 4 AA1 4 LEU H 69 ASP H 74 -1 N ASP H 74 O GLN H 79 SHEET 1 AA2 6 VAL H 11 VAL H 12 0 SHEET 2 AA2 6 VAL H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AA2 6 ALA H 93 TRP H 100 -1 N ALA H 93 O VAL H 114 SHEET 4 AA2 6 GLY H 34 GLN H 40 -1 N ILE H 38 O TYR H 96 SHEET 5 AA2 6 LEU H 46 TYR H 53 -1 O GLU H 47 N ARG H 39 SHEET 6 AA2 6 THR H 59 TYR H 61 -1 O ASN H 60 N ASN H 51 SHEET 1 AA3 4 VAL H 11 VAL H 12 0 SHEET 2 AA3 4 VAL H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AA3 4 ALA H 93 TRP H 100 -1 N ALA H 93 O VAL H 114 SHEET 4 AA3 4 PHE H 105 TRP H 108 -1 O TYR H 107 N ARG H 99 SHEET 1 AA4 4 SER H 125 LEU H 129 0 SHEET 2 AA4 4 THR H 140 TYR H 150 -1 O LEU H 146 N PHE H 127 SHEET 3 AA4 4 TYR H 181 PRO H 190 -1 O TYR H 181 N TYR H 150 SHEET 4 AA4 4 VAL H 168 THR H 170 -1 N HIS H 169 O VAL H 186 SHEET 1 AA5 4 SER H 125 LEU H 129 0 SHEET 2 AA5 4 THR H 140 TYR H 150 -1 O LEU H 146 N PHE H 127 SHEET 3 AA5 4 TYR H 181 PRO H 190 -1 O TYR H 181 N TYR H 150 SHEET 4 AA5 4 VAL H 174 LEU H 175 -1 N VAL H 174 O SER H 182 SHEET 1 AA6 3 THR H 156 TRP H 159 0 SHEET 2 AA6 3 ILE H 200 HIS H 205 -1 O ASN H 202 N SER H 158 SHEET 3 AA6 3 THR H 210 ARG H 215 -1 O VAL H 212 N VAL H 203 SHEET 1 AA7 4 MET L 4 SER L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 ALA L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 SER L 10 ALA L 13 0 SHEET 2 AA8 6 THR L 102 ILE L 106 1 O ASP L 105 N LEU L 11 SHEET 3 AA8 6 LEU L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N GLN L 38 O LEU L 85 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 ASN L 53 LEU L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AA9 4 SER L 10 ALA L 13 0 SHEET 2 AA9 4 THR L 102 ILE L 106 1 O ASP L 105 N LEU L 11 SHEET 3 AA9 4 LEU L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA9 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 ALA L 144 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 HIS L 198 -1 O ALA L 193 N LYS L 149 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 97 1555 1555 2.12 SSBOND 2 CYS H 145 CYS H 201 1555 1555 2.06 SSBOND 3 CYS H 221 CYS L 214 1555 1555 2.05 SSBOND 4 CYS L 23 CYS L 88 1555 1555 2.11 SSBOND 5 CYS L 134 CYS L 194 1555 1555 2.07 CISPEP 1 PHE H 151 PRO H 152 0 -5.35 CISPEP 2 GLU H 153 PRO H 154 0 -2.34 CISPEP 3 SER L 7 PRO L 8 0 -4.81 CISPEP 4 TYR L 140 PRO L 141 0 4.81 SITE 1 AC1 4 GLN H 110 GLY H 111 HOH H 447 GLY L 41 SITE 1 AC2 4 THR H 140 THR H 188 VAL H 189 PRO H 190 SITE 1 AC3 4 GLY H 195 THR H 196 THR H 198 GLU H 217 SITE 1 AC4 3 TRP H 100 HIS L 91 ASN L 92 SITE 1 AC5 7 HIS H 55 ASP H 222 ASP L 1 ILE L 2 SITE 2 AC5 7 GLN L 27 TYR L 94 HOH L 407 SITE 1 AC6 4 SER L 9 PRO L 100 GLY L 101 ARG L 142 SITE 1 AC7 1 SER L 203 CRYST1 111.260 111.260 141.040 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008988 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008988 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007090 0.00000