HEADER TRANSFERASE 03-FEB-20 6VPI TITLE TPX2 RESIDUES 7-20 FUSED TO AURORA A RESIDUES 116-389 C247V + D256N + TITLE 2 C319V TRIPLE MUTANT DISULFIDE HOMODIMER IN COMPLEX WITH AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TPX2 FRAGMENT - AURORA A KINASE DOMAIN FUSION; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: TARGETING PROTEIN FOR XKLP2,AURORA KINASE A,DIFFERENTIALLY COMPND 6 EXPRESSED IN CANCEROUS AND NON-CANCEROUS LUNG CELLS 2,DIL-2, COMPND 7 HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 519,HEPATOCELLULAR COMPND 8 CARCINOMA-ASSOCIATED ANTIGEN 90,PROTEIN FLS353,RESTRICTED EXPRESSION COMPND 9 PROLIFERATION-ASSOCIATED PROTEIN 100,P100,AURORA 2,AURORA/IPL1- COMPND 10 RELATED KINASE 1,HARK1,BREAST TUMOR-AMPLIFIED KINASE, COMPND 11 SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE-PROTEIN KINASE 6, COMPND 12 SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 13 EC: 2.7.11.1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TPX2, C20ORF1, C20ORF2, DIL2, HCA519, AURKA, AIK, AIRK1, ARK1, SOURCE 6 AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS SER/THR KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.C.LIM,M.B.YAFFE REVDAT 2 11-OCT-23 6VPI 1 REMARK REVDAT 1 05-AUG-20 6VPI 0 JRNL AUTH D.C.LIM,V.JOUKOV,T.J.RETTENMAIER,A.KUMAGAI,W.G.DUNPHY, JRNL AUTH 2 J.A.WELLS,M.B.YAFFE JRNL TITL REDOX PRIMING PROMOTES AURORA A ACTIVATION DURING MITOSIS. JRNL REF SCI.SIGNAL. V. 13 2020 JRNL REFN ESSN 1937-9145 JRNL PMID 32694171 JRNL DOI 10.1126/SCISIGNAL.ABB6707 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 32025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.230 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.2600 - 4.8100 0.93 2215 147 0.1706 0.1813 REMARK 3 2 4.8100 - 3.8200 0.98 2192 146 0.1317 0.1493 REMARK 3 3 3.8200 - 3.3400 0.98 2160 144 0.1578 0.2038 REMARK 3 4 3.3400 - 3.0400 0.98 2156 144 0.1937 0.2592 REMARK 3 5 3.0400 - 2.8200 0.98 2160 143 0.2172 0.2343 REMARK 3 6 2.8200 - 2.6500 0.99 2143 139 0.2219 0.2600 REMARK 3 7 2.6500 - 2.5200 0.99 2139 143 0.2291 0.2284 REMARK 3 8 2.5200 - 2.4100 0.99 2138 142 0.2222 0.2377 REMARK 3 9 2.4100 - 2.3200 0.99 2138 143 0.2232 0.2824 REMARK 3 10 2.3200 - 2.2400 0.99 2137 142 0.2226 0.2298 REMARK 3 11 2.2400 - 2.1700 0.99 2130 141 0.2252 0.2651 REMARK 3 12 2.1700 - 2.1100 0.99 2126 142 0.2339 0.2698 REMARK 3 13 2.1100 - 2.0500 0.99 2102 140 0.2344 0.2997 REMARK 3 14 2.0500 - 2.0000 0.98 2094 139 0.2622 0.2986 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 126:287 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.263 -4.410 26.940 REMARK 3 T TENSOR REMARK 3 T11: 0.3288 T22: 0.1969 REMARK 3 T33: 0.2474 T12: -0.0102 REMARK 3 T13: 0.0373 T23: -0.0256 REMARK 3 L TENSOR REMARK 3 L11: 0.2525 L22: 1.7288 REMARK 3 L33: 0.5624 L12: -0.5281 REMARK 3 L13: 0.1609 L23: -0.1093 REMARK 3 S TENSOR REMARK 3 S11: -0.0693 S12: -0.0455 S13: -0.0516 REMARK 3 S21: 0.2590 S22: 0.0686 S23: 0.0951 REMARK 3 S31: 0.0744 S32: -0.0170 S33: 0.0018 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 288:307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.698 19.139 37.645 REMARK 3 T TENSOR REMARK 3 T11: 0.3394 T22: 0.4247 REMARK 3 T33: 0.3801 T12: -0.0082 REMARK 3 T13: -0.0100 T23: -0.0735 REMARK 3 L TENSOR REMARK 3 L11: 0.0250 L22: 0.0111 REMARK 3 L33: 0.0469 L12: 0.0153 REMARK 3 L13: 0.0159 L23: 0.0170 REMARK 3 S TENSOR REMARK 3 S11: -0.1443 S12: 0.2448 S13: -0.1379 REMARK 3 S21: -0.3004 S22: 0.1644 S23: -0.0664 REMARK 3 S31: -0.2043 S32: 0.1609 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 308:389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.320 14.464 12.217 REMARK 3 T TENSOR REMARK 3 T11: 0.3010 T22: 0.2074 REMARK 3 T33: 0.2564 T12: 0.0074 REMARK 3 T13: -0.0260 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.3308 L22: 1.7770 REMARK 3 L33: 1.1453 L12: 0.4340 REMARK 3 L13: 0.0703 L23: 0.2287 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: 0.0426 S13: 0.0671 REMARK 3 S21: -0.0729 S22: -0.0086 S23: 0.0199 REMARK 3 S31: -0.1610 S32: -0.0513 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 7:20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.413 -11.005 38.616 REMARK 3 T TENSOR REMARK 3 T11: 0.7361 T22: 0.4381 REMARK 3 T33: 0.5268 T12: -0.0176 REMARK 3 T13: 0.2164 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.0756 L22: 0.1999 REMARK 3 L33: 0.1227 L12: -0.1227 REMARK 3 L13: 0.0513 L23: -0.0742 REMARK 3 S TENSOR REMARK 3 S11: -0.1884 S12: -0.2831 S13: -0.1932 REMARK 3 S21: 0.6239 S22: 0.1679 S23: 0.4621 REMARK 3 S31: -0.1036 S32: -0.2866 S33: 0.0013 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VPI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000246823. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32094 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 23.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.61700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OL5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.336 M SODIUM MALONATE PH 7.5, 0.348 REMARK 280 M SODIUM MALONATE PH 6.5, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.12300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.64600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.64600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.06150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.64600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.64600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 96.18450 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.64600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.64600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.06150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.64600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.64600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 96.18450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 64.12300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 64.12300 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 907 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 HIS A 5 REMARK 465 MET A 6 REMARK 465 SER A 116 REMARK 465 LYS A 117 REMARK 465 GLN A 118 REMARK 465 LYS A 119 REMARK 465 ASN A 120 REMARK 465 GLU A 121 REMARK 465 GLU A 122 REMARK 465 SER A 123 REMARK 465 LYS A 124 REMARK 465 LYS A 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 295 OE1 GLU A 321 8555 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 202 -153.36 -118.56 REMARK 500 SER A 226 -54.07 69.82 REMARK 500 ASN A 256 43.56 -140.54 REMARK 500 ASP A 274 80.51 58.02 REMARK 500 ASP A 307 -156.80 -141.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 261 OD1 REMARK 620 2 ASP A 274 OD2 79.9 REMARK 620 3 ANP A 601 O3G 145.1 134.3 REMARK 620 4 ANP A 601 O2A 109.2 86.1 73.0 REMARK 620 5 HOH A 785 O 70.8 122.4 81.7 60.4 REMARK 620 6 HOH A 889 O 99.0 85.9 91.6 148.8 145.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 882 O REMARK 620 2 HOH A 889 O 157.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLA A 604 DBREF 6VPI A 7 20 UNP Q9ULW0 TPX2_HUMAN 7 20 DBREF 6VPI A 116 389 UNP O14965 AURKA_HUMAN 116 389 SEQADV 6VPI GLY A 3 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPI ALA A 4 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPI HIS A 5 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPI MET A 6 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPI VAL A 247 UNP O14965 CYS 247 CONFLICT SEQADV 6VPI ASN A 256 UNP O14965 ASP 256 CONFLICT SEQADV 6VPI VAL A 319 UNP O14965 CYS 319 CONFLICT SEQRES 1 A 292 GLY ALA HIS MET SER TYR SER TYR ASP ALA PRO SER ASP SEQRES 2 A 292 PHE ILE ASN PHE SER SER LYS GLN LYS ASN GLU GLU SER SEQRES 3 A 292 LYS LYS ARG GLN TRP ALA LEU GLU ASP PHE GLU ILE GLY SEQRES 4 A 292 ARG PRO LEU GLY LYS GLY LYS PHE GLY ASN VAL TYR LEU SEQRES 5 A 292 ALA ARG GLU LYS GLN SER LYS PHE ILE LEU ALA LEU LYS SEQRES 6 A 292 VAL LEU PHE LYS ALA GLN LEU GLU LYS ALA GLY VAL GLU SEQRES 7 A 292 HIS GLN LEU ARG ARG GLU VAL GLU ILE GLN SER HIS LEU SEQRES 8 A 292 ARG HIS PRO ASN ILE LEU ARG LEU TYR GLY TYR PHE HIS SEQRES 9 A 292 ASP ALA THR ARG VAL TYR LEU ILE LEU GLU TYR ALA PRO SEQRES 10 A 292 LEU GLY THR VAL TYR ARG GLU LEU GLN LYS LEU SER LYS SEQRES 11 A 292 PHE ASP GLU GLN ARG THR ALA THR TYR ILE THR GLU LEU SEQRES 12 A 292 ALA ASN ALA LEU SER TYR VAL HIS SER LYS ARG VAL ILE SEQRES 13 A 292 HIS ARG ASN ILE LYS PRO GLU ASN LEU LEU LEU GLY SER SEQRES 14 A 292 ALA GLY GLU LEU LYS ILE ALA ASP PHE GLY TRP SER VAL SEQRES 15 A 292 HIS ALA PRO SER SER ARG ARG THR THR LEU CYS GLY THR SEQRES 16 A 292 LEU ASP TYR LEU PRO PRO GLU MET ILE GLU GLY ARG MET SEQRES 17 A 292 HIS ASP GLU LYS VAL ASP LEU TRP SER LEU GLY VAL LEU SEQRES 18 A 292 VAL TYR GLU PHE LEU VAL GLY LYS PRO PRO PHE GLU ALA SEQRES 19 A 292 ASN THR TYR GLN GLU THR TYR LYS ARG ILE SER ARG VAL SEQRES 20 A 292 GLU PHE THR PHE PRO ASP PHE VAL THR GLU GLY ALA ARG SEQRES 21 A 292 ASP LEU ILE SER ARG LEU LEU LYS HIS ASN PRO SER GLN SEQRES 22 A 292 ARG PRO MET LEU ARG GLU VAL LEU GLU HIS PRO TRP ILE SEQRES 23 A 292 THR ALA ASN SER SER LYS HET ANP A 601 31 HET MG A 602 1 HET MG A 603 1 HET MLA A 604 7 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM MLA MALONIC ACID HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 2 ANP C10 H17 N6 O12 P3 FORMUL 3 MG 2(MG 2+) FORMUL 5 MLA C3 H4 O4 FORMUL 6 HOH *233(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 ALA A 172 1 7 HELIX 3 AA3 VAL A 174 HIS A 187 1 14 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 LYS A 250 1 22 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 PRO A 297 ILE A 301 5 5 HELIX 8 AA8 GLU A 308 GLY A 325 1 18 HELIX 9 AA9 THR A 333 ARG A 343 1 11 HELIX 10 AB1 THR A 353 LEU A 364 1 12 HELIX 11 AB2 ASN A 367 ARG A 371 5 5 HELIX 12 AB3 MET A 373 GLU A 379 1 7 HELIX 13 AB4 HIS A 380 SER A 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O LEU A 149 N GLY A 136 SHEET 3 AA1 5 ILE A 158 PHE A 165 -1 O LEU A 161 N TYR A 148 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N PHE A 200 O TYR A 207 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 SSBOND 1 CYS A 290 CYS A 290 1555 8555 2.03 LINK OD1 ASN A 261 MG MG A 602 1555 1555 2.32 LINK OD2 ASP A 274 MG MG A 602 1555 1555 2.57 LINK O3G ANP A 601 MG MG A 602 1555 1555 2.50 LINK O2A ANP A 601 MG MG A 602 1555 1555 2.73 LINK MG MG A 602 O HOH A 785 1555 1555 2.68 LINK MG MG A 602 O HOH A 889 1555 1555 2.61 LINK MG MG A 603 O HOH A 882 1555 1555 2.60 LINK MG MG A 603 O HOH A 889 1555 1555 2.79 CISPEP 1 ALA A 281 PRO A 282 0 -3.98 SITE 1 AC1 23 LEU A 139 GLY A 140 LYS A 141 GLY A 142 SITE 2 AC1 23 LYS A 143 VAL A 147 ALA A 160 LYS A 162 SITE 3 AC1 23 LEU A 194 GLU A 211 ALA A 213 THR A 217 SITE 4 AC1 23 LEU A 263 ASP A 274 MG A 602 MG A 603 SITE 5 AC1 23 HOH A 703 HOH A 711 HOH A 745 HOH A 785 SITE 6 AC1 23 HOH A 842 HOH A 868 HOH A 875 SITE 1 AC2 5 ASN A 261 ASP A 274 ANP A 601 HOH A 785 SITE 2 AC2 5 HOH A 889 SITE 1 AC3 5 ASN A 256 ASP A 274 ANP A 601 HOH A 882 SITE 2 AC3 5 HOH A 889 SITE 1 AC4 7 ARG A 137 PRO A 138 LYS A 365 HIS A 366 SITE 2 AC4 7 HOH A 727 HOH A 762 HOH A 872 CRYST1 85.292 85.292 128.246 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011724 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011724 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007798 0.00000