HEADER TRANSFERASE 03-FEB-20 6VPM TITLE TPX2 RESIDUES 7-20 FUSED TO AURORA A RESIDUES 116-389 WITH C290 TITLE 2 DISULFIDE BONDED TO COMPOUND 8-34, AND IN COMPLEX WITH AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TPX2 FRAGMENT - AURORA A KINASE DOMAIN FUSION; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: TARGETING PROTEIN FOR XKLP2,AURORA KINASE A,DIFFERENTIALLY COMPND 6 EXPRESSED IN CANCEROUS AND NON-CANCEROUS LUNG CELLS 2,DIL-2, COMPND 7 HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 519,HEPATOCELLULAR COMPND 8 CARCINOMA-ASSOCIATED ANTIGEN 90,PROTEIN FLS353,RESTRICTED EXPRESSION COMPND 9 PROLIFERATION-ASSOCIATED PROTEIN 100,P100,AURORA 2,AURORA/IPL1- COMPND 10 RELATED KINASE 1,HARK1,BREAST TUMOR-AMPLIFIED KINASE, COMPND 11 SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE-PROTEIN KINASE 6, COMPND 12 SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 13 EC: 2.7.11.1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TPX2, C20ORF1, C20ORF2, DIL2, HCA519, AURKA, AIK, AIRK1, ARK1, SOURCE 6 AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS SER/THR KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.C.LIM,M.B.YAFFE REVDAT 2 03-APR-24 6VPM 1 REMARK REVDAT 1 05-AUG-20 6VPM 0 JRNL AUTH D.C.LIM,V.JOUKOV,T.J.RETTENMAIER,A.KUMAGAI,W.G.DUNPHY, JRNL AUTH 2 J.A.WELLS,M.B.YAFFE JRNL TITL REDOX PRIMING PROMOTES AURORA A ACTIVATION DURING MITOSIS. JRNL REF SCI.SIGNAL. V. 13 2020 JRNL REFN ESSN 1937-9145 JRNL PMID 32694171 JRNL DOI 10.1126/SCISIGNAL.ABB6707 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 3 NUMBER OF REFLECTIONS : 81814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.440 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.8700 - 3.8100 0.93 6272 157 0.1506 0.1847 REMARK 3 2 3.8100 - 3.0200 0.96 6229 156 0.1610 0.1858 REMARK 3 3 3.0200 - 2.6400 0.97 6260 157 0.1775 0.2176 REMARK 3 4 2.6400 - 2.4000 0.96 6137 154 0.1742 0.2050 REMARK 3 5 2.4000 - 2.2300 0.93 5957 150 0.1689 0.1884 REMARK 3 6 2.2300 - 2.1000 0.93 5950 149 0.1638 0.2087 REMARK 3 7 2.1000 - 1.9900 0.94 5954 149 0.1670 0.1958 REMARK 3 8 1.9900 - 1.9100 0.94 5966 149 0.1779 0.2128 REMARK 3 9 1.9100 - 1.8300 0.86 5505 139 0.2319 0.2659 REMARK 3 10 1.8300 - 1.7700 0.83 5277 131 0.2089 0.2509 REMARK 3 11 1.7700 - 1.7100 0.82 5135 129 0.2010 0.2692 REMARK 3 12 1.7100 - 1.6600 0.81 5144 129 0.2102 0.2652 REMARK 3 13 1.6600 - 1.6200 0.80 4999 125 0.2205 0.2261 REMARK 3 14 1.6200 - 1.5800 0.80 5029 126 0.2381 0.2613 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 33 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8329 31.4041 -25.4786 REMARK 3 T TENSOR REMARK 3 T11: 0.2117 T22: 0.2475 REMARK 3 T33: 0.4239 T12: 0.0287 REMARK 3 T13: -0.1037 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 0.1536 L22: 0.3540 REMARK 3 L33: 1.0213 L12: -0.2197 REMARK 3 L13: -0.0150 L23: 0.1002 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: -0.2488 S13: -0.3699 REMARK 3 S21: -0.0000 S22: 0.0450 S23: -0.0629 REMARK 3 S31: -0.2070 S32: -0.1504 S33: 0.0656 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0780 23.8994 -27.1469 REMARK 3 T TENSOR REMARK 3 T11: 0.1655 T22: 0.1750 REMARK 3 T33: 0.1745 T12: 0.0097 REMARK 3 T13: 0.0096 T23: 0.0220 REMARK 3 L TENSOR REMARK 3 L11: 1.0680 L22: 1.7748 REMARK 3 L33: 0.7865 L12: 0.0127 REMARK 3 L13: 0.9899 L23: 0.4124 REMARK 3 S TENSOR REMARK 3 S11: -0.1086 S12: -0.1209 S13: 0.0814 REMARK 3 S21: -0.0073 S22: 0.0842 S23: 0.0792 REMARK 3 S31: -0.0660 S32: -0.0810 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.4087 16.9243 -43.3919 REMARK 3 T TENSOR REMARK 3 T11: 0.3097 T22: 0.2432 REMARK 3 T33: 0.4063 T12: 0.0086 REMARK 3 T13: -0.1232 T23: 0.0341 REMARK 3 L TENSOR REMARK 3 L11: 0.6604 L22: 0.0002 REMARK 3 L33: 0.4131 L12: -0.0065 REMARK 3 L13: 0.1008 L23: 0.0850 REMARK 3 S TENSOR REMARK 3 S11: -0.1294 S12: -0.2107 S13: 0.4275 REMARK 3 S21: -0.5241 S22: 0.1631 S23: 0.6488 REMARK 3 S31: -0.3049 S32: -0.3603 S33: 0.0137 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3553 9.3547 -41.7763 REMARK 3 T TENSOR REMARK 3 T11: 0.2517 T22: 0.2135 REMARK 3 T33: 0.1836 T12: -0.0399 REMARK 3 T13: 0.0028 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.6301 L22: 0.6757 REMARK 3 L33: 0.2914 L12: 0.2354 REMARK 3 L13: 0.4598 L23: 0.2587 REMARK 3 S TENSOR REMARK 3 S11: -0.1508 S12: -0.1005 S13: -0.0676 REMARK 3 S21: -0.1935 S22: 0.1710 S23: -0.0615 REMARK 3 S31: 0.0944 S32: -0.0243 S33: 0.0037 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 259 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9926 14.4058 -35.6589 REMARK 3 T TENSOR REMARK 3 T11: 0.2408 T22: 0.2346 REMARK 3 T33: 0.2155 T12: -0.0115 REMARK 3 T13: -0.0087 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.4154 L22: 0.5768 REMARK 3 L33: 0.7792 L12: 0.4980 REMARK 3 L13: 0.0029 L23: 0.4427 REMARK 3 S TENSOR REMARK 3 S11: -0.0263 S12: -0.1021 S13: -0.0481 REMARK 3 S21: -0.0302 S22: -0.0541 S23: 0.0562 REMARK 3 S31: -0.0187 S32: 0.3043 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 287 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7187 -10.9937 -24.3839 REMARK 3 T TENSOR REMARK 3 T11: 0.3451 T22: 0.3410 REMARK 3 T33: 0.2959 T12: 0.0268 REMARK 3 T13: 0.0075 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.0214 L22: 0.2280 REMARK 3 L33: 0.2680 L12: -0.0244 REMARK 3 L13: -0.1278 L23: -0.0541 REMARK 3 S TENSOR REMARK 3 S11: 0.0881 S12: 0.0161 S13: 0.1874 REMARK 3 S21: 0.0748 S22: 0.0350 S23: -0.2301 REMARK 3 S31: -0.1697 S32: 0.3479 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1461 2.4076 -37.5869 REMARK 3 T TENSOR REMARK 3 T11: 0.2348 T22: 0.1988 REMARK 3 T33: 0.1922 T12: -0.0086 REMARK 3 T13: -0.0205 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.5579 L22: 0.9325 REMARK 3 L33: 0.5550 L12: 0.7060 REMARK 3 L13: -0.0068 L23: 0.2229 REMARK 3 S TENSOR REMARK 3 S11: -0.1228 S12: -0.0953 S13: -0.0441 REMARK 3 S21: -0.0040 S22: 0.0769 S23: -0.0341 REMARK 3 S31: 0.0627 S32: 0.0718 S33: 0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 334 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.1853 -3.3969 -30.0083 REMARK 3 T TENSOR REMARK 3 T11: 0.2672 T22: 0.2639 REMARK 3 T33: 0.3314 T12: 0.0060 REMARK 3 T13: 0.0242 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 0.0927 L22: 0.1182 REMARK 3 L33: 0.0478 L12: -0.0017 REMARK 3 L13: 0.0122 L23: -0.0803 REMARK 3 S TENSOR REMARK 3 S11: -0.4084 S12: 0.0952 S13: -0.0906 REMARK 3 S21: 0.3860 S22: 0.1620 S23: 0.6601 REMARK 3 S31: 0.6371 S32: -0.0836 S33: 0.0002 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.0349 -3.6091 -45.3685 REMARK 3 T TENSOR REMARK 3 T11: 0.3364 T22: 0.2178 REMARK 3 T33: 0.2452 T12: -0.0344 REMARK 3 T13: -0.0135 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.8630 L22: 0.9125 REMARK 3 L33: 0.6298 L12: 1.0566 REMARK 3 L13: -0.4099 L23: -0.0661 REMARK 3 S TENSOR REMARK 3 S11: -0.2293 S12: 0.1082 S13: -0.3481 REMARK 3 S21: -0.4066 S22: 0.1743 S23: -0.0386 REMARK 3 S31: 0.2698 S32: 0.0376 S33: -0.0595 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 374 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3854 5.7527 -53.4605 REMARK 3 T TENSOR REMARK 3 T11: 0.5092 T22: 0.3552 REMARK 3 T33: 0.2009 T12: -0.1361 REMARK 3 T13: 0.0655 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.3662 L22: 0.6393 REMARK 3 L33: 0.2503 L12: 0.4707 REMARK 3 L13: -0.0312 L23: -0.1829 REMARK 3 S TENSOR REMARK 3 S11: -0.3132 S12: 0.5276 S13: -0.0869 REMARK 3 S21: -0.9039 S22: 0.2646 S23: -0.2476 REMARK 3 S31: 0.0313 S32: 0.1697 S33: 0.0057 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5361 19.1672 -15.7809 REMARK 3 T TENSOR REMARK 3 T11: 0.3190 T22: 0.2886 REMARK 3 T33: 0.2450 T12: 0.0918 REMARK 3 T13: -0.0208 T23: 0.0403 REMARK 3 L TENSOR REMARK 3 L11: 0.0097 L22: 0.0154 REMARK 3 L33: 0.0421 L12: -0.0068 REMARK 3 L13: -0.0319 L23: 0.0261 REMARK 3 S TENSOR REMARK 3 S11: -0.4514 S12: -0.1489 S13: -0.4774 REMARK 3 S21: 0.4196 S22: 0.0542 S23: -0.0870 REMARK 3 S31: 0.3093 S32: 0.4593 S33: 0.0009 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3841 28.9126 -31.2771 REMARK 3 T TENSOR REMARK 3 T11: 0.2585 T22: 0.2601 REMARK 3 T33: 0.3686 T12: -0.0282 REMARK 3 T13: 0.0356 T23: 0.0960 REMARK 3 L TENSOR REMARK 3 L11: 0.0918 L22: 0.1002 REMARK 3 L33: 0.0061 L12: 0.0460 REMARK 3 L13: -0.0008 L23: 0.0402 REMARK 3 S TENSOR REMARK 3 S11: -0.2180 S12: 0.1603 S13: 0.1684 REMARK 3 S21: -0.2575 S22: -0.0708 S23: -1.0687 REMARK 3 S31: -0.0414 S32: 0.1747 S33: -0.0031 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 125 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1202 12.5967 -1.1838 REMARK 3 T TENSOR REMARK 3 T11: 0.4397 T22: 0.3220 REMARK 3 T33: 0.4619 T12: -0.0675 REMARK 3 T13: -0.1779 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.1022 L22: 0.5258 REMARK 3 L33: 0.6312 L12: -0.0023 REMARK 3 L13: -0.1767 L23: -0.3065 REMARK 3 S TENSOR REMARK 3 S11: -0.0335 S12: -0.0849 S13: 0.1045 REMARK 3 S21: 0.4706 S22: -0.2542 S23: -0.5164 REMARK 3 S31: -0.7060 S32: 0.3120 S33: -0.1392 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 136 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9094 1.0470 -5.1029 REMARK 3 T TENSOR REMARK 3 T11: 0.3029 T22: 0.2905 REMARK 3 T33: 0.4322 T12: 0.0099 REMARK 3 T13: -0.1210 T23: 0.0426 REMARK 3 L TENSOR REMARK 3 L11: 0.9978 L22: 1.7505 REMARK 3 L33: 1.2793 L12: 0.5200 REMARK 3 L13: -0.4480 L23: -1.5269 REMARK 3 S TENSOR REMARK 3 S11: -0.1201 S12: 0.0492 S13: 0.0035 REMARK 3 S21: -0.0645 S22: -0.5717 S23: -1.1700 REMARK 3 S31: -0.2192 S32: 0.4241 S33: -0.9614 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 157 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1858 5.5961 -14.5744 REMARK 3 T TENSOR REMARK 3 T11: 0.2154 T22: 0.2112 REMARK 3 T33: 0.2179 T12: 0.0190 REMARK 3 T13: 0.0149 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.2263 L22: 1.5089 REMARK 3 L33: 0.1766 L12: 0.6179 REMARK 3 L13: 0.1901 L23: -0.1164 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: 0.0333 S13: 0.0268 REMARK 3 S21: -0.1077 S22: -0.0073 S23: -0.1736 REMARK 3 S31: 0.0214 S32: 0.0315 S33: -0.0001 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 188 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5373 2.9296 -3.8025 REMARK 3 T TENSOR REMARK 3 T11: 0.2165 T22: 0.2112 REMARK 3 T33: 0.2006 T12: -0.0130 REMARK 3 T13: -0.0291 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.1819 L22: 0.2348 REMARK 3 L33: 0.0844 L12: -0.2189 REMARK 3 L13: -0.1117 L23: 0.0624 REMARK 3 S TENSOR REMARK 3 S11: -0.0303 S12: -0.1019 S13: 0.0228 REMARK 3 S21: 0.3193 S22: -0.0415 S23: -0.0480 REMARK 3 S31: -0.1614 S32: -0.0824 S33: 0.0000 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 202 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9803 1.8032 -7.2521 REMARK 3 T TENSOR REMARK 3 T11: 0.1805 T22: 0.2443 REMARK 3 T33: 0.3144 T12: -0.0109 REMARK 3 T13: -0.0393 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 0.0970 L22: 0.1951 REMARK 3 L33: 0.3503 L12: 0.1433 REMARK 3 L13: 0.1895 L23: -0.0387 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: -0.0724 S13: 0.0028 REMARK 3 S21: 0.4148 S22: -0.0528 S23: -0.6724 REMARK 3 S31: -0.1523 S32: 0.1573 S33: -0.0019 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 218 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3824 -16.6364 -5.0892 REMARK 3 T TENSOR REMARK 3 T11: 0.0967 T22: 0.1634 REMARK 3 T33: 0.1594 T12: 0.0106 REMARK 3 T13: 0.0015 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 0.5541 L22: 0.3937 REMARK 3 L33: 0.8408 L12: 0.1813 REMARK 3 L13: -0.0065 L23: -0.1910 REMARK 3 S TENSOR REMARK 3 S11: 0.0440 S12: -0.0400 S13: -0.0183 REMARK 3 S21: 0.0361 S22: -0.0469 S23: 0.0368 REMARK 3 S31: 0.0065 S32: 0.0769 S33: -0.0000 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 251 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6643 -5.4575 -14.3058 REMARK 3 T TENSOR REMARK 3 T11: 0.2184 T22: 0.2416 REMARK 3 T33: 0.2037 T12: 0.0287 REMARK 3 T13: 0.0003 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 0.0544 L22: 0.1473 REMARK 3 L33: 0.0814 L12: 0.0888 REMARK 3 L13: 0.0057 L23: -0.1027 REMARK 3 S TENSOR REMARK 3 S11: -0.2013 S12: -0.0835 S13: -0.0656 REMARK 3 S21: -0.1182 S22: 0.2180 S23: 0.0604 REMARK 3 S31: 0.0885 S32: 0.0534 S33: -0.0002 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 259 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6437 -6.7048 -9.2333 REMARK 3 T TENSOR REMARK 3 T11: 0.2310 T22: 0.2218 REMARK 3 T33: 0.1980 T12: 0.0237 REMARK 3 T13: -0.0112 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 0.2225 L22: 0.3645 REMARK 3 L33: 0.0840 L12: 0.3394 REMARK 3 L13: -0.2373 L23: -0.2389 REMARK 3 S TENSOR REMARK 3 S11: 0.1060 S12: -0.0079 S13: -0.0265 REMARK 3 S21: 0.0121 S22: 0.0479 S23: -0.0714 REMARK 3 S31: -0.1695 S32: 0.0704 S33: 0.0085 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 287 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6283 2.6686 -27.9466 REMARK 3 T TENSOR REMARK 3 T11: 0.3140 T22: 0.3391 REMARK 3 T33: 0.3384 T12: 0.0165 REMARK 3 T13: -0.0158 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 0.1559 L22: 0.1870 REMARK 3 L33: 0.2253 L12: 0.2241 REMARK 3 L13: 0.0399 L23: 0.0132 REMARK 3 S TENSOR REMARK 3 S11: -0.1917 S12: -0.3353 S13: 0.1238 REMARK 3 S21: 0.4940 S22: 0.1284 S23: 0.3976 REMARK 3 S31: -0.2203 S32: 0.1003 S33: 0.0002 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 303 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0293 -14.8272 -15.2765 REMARK 3 T TENSOR REMARK 3 T11: 0.1972 T22: 0.2507 REMARK 3 T33: 0.1996 T12: 0.0036 REMARK 3 T13: -0.0001 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 0.1350 L22: 0.2566 REMARK 3 L33: 0.7944 L12: 0.2024 REMARK 3 L13: 0.1108 L23: -0.0369 REMARK 3 S TENSOR REMARK 3 S11: -0.0471 S12: 0.0677 S13: -0.0135 REMARK 3 S21: 0.0257 S22: 0.0027 S23: 0.1778 REMARK 3 S31: -0.1458 S32: 0.0074 S33: 0.0001 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 325 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6676 -24.1703 -22.5951 REMARK 3 T TENSOR REMARK 3 T11: 0.2497 T22: 0.3447 REMARK 3 T33: 0.2345 T12: 0.0881 REMARK 3 T13: 0.0546 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.1449 L22: 0.1544 REMARK 3 L33: 0.2019 L12: 0.1683 REMARK 3 L13: 0.1189 L23: 0.0939 REMARK 3 S TENSOR REMARK 3 S11: 0.1776 S12: 0.0429 S13: -0.2971 REMARK 3 S21: -0.2498 S22: -0.1027 S23: -0.2519 REMARK 3 S31: 0.2885 S32: 0.2579 S33: 0.0348 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 334 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.2559 -20.7553 -29.2848 REMARK 3 T TENSOR REMARK 3 T11: 0.4362 T22: 0.4128 REMARK 3 T33: 0.2364 T12: 0.1277 REMARK 3 T13: 0.0189 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.4243 L22: 0.9643 REMARK 3 L33: 0.0232 L12: 0.0559 REMARK 3 L13: -0.0166 L23: -0.0168 REMARK 3 S TENSOR REMARK 3 S11: 0.0560 S12: 0.5510 S13: 0.1583 REMARK 3 S21: -0.0314 S22: 0.2327 S23: -0.4527 REMARK 3 S31: -0.0957 S32: -0.0373 S33: 0.0110 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 343 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3087 -29.5582 -18.7120 REMARK 3 T TENSOR REMARK 3 T11: 0.3229 T22: 0.2679 REMARK 3 T33: 0.2542 T12: 0.0195 REMARK 3 T13: -0.0045 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.1534 L22: 0.1710 REMARK 3 L33: 0.1003 L12: -0.1550 REMARK 3 L13: -0.0708 L23: 0.1426 REMARK 3 S TENSOR REMARK 3 S11: 0.0485 S12: 0.1569 S13: -0.2234 REMARK 3 S21: -0.3258 S22: -0.1739 S23: 0.1746 REMARK 3 S31: 0.6051 S32: -0.1632 S33: 0.0006 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 354 THROUGH 363 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5780 -25.5874 -11.0000 REMARK 3 T TENSOR REMARK 3 T11: 0.1856 T22: 0.2623 REMARK 3 T33: 0.2958 T12: -0.0328 REMARK 3 T13: 0.0077 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 0.0028 L22: 0.0815 REMARK 3 L33: 0.0982 L12: 0.0203 REMARK 3 L13: -0.0298 L23: 0.0458 REMARK 3 S TENSOR REMARK 3 S11: 0.0781 S12: 0.0920 S13: -0.2227 REMARK 3 S21: -0.1997 S22: -0.1108 S23: 0.6521 REMARK 3 S31: 0.2287 S32: -0.2391 S33: -0.0004 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 364 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4906 -15.2263 -17.2823 REMARK 3 T TENSOR REMARK 3 T11: 0.2252 T22: 0.3742 REMARK 3 T33: 0.2337 T12: 0.0731 REMARK 3 T13: -0.0312 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.0716 L22: 0.0914 REMARK 3 L33: 0.0542 L12: -0.0227 REMARK 3 L13: 0.0678 L23: -0.0074 REMARK 3 S TENSOR REMARK 3 S11: 0.1282 S12: 0.4040 S13: -0.2110 REMARK 3 S21: -0.2463 S22: -0.1384 S23: 0.3092 REMARK 3 S31: -0.0520 S32: -0.6634 S33: -0.0001 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 374 THROUGH 380 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5723 -16.0459 -4.0547 REMARK 3 T TENSOR REMARK 3 T11: 0.1676 T22: 0.2605 REMARK 3 T33: 0.3108 T12: -0.0081 REMARK 3 T13: 0.0230 T23: 0.0605 REMARK 3 L TENSOR REMARK 3 L11: 0.0100 L22: 0.1050 REMARK 3 L33: 0.0013 L12: 0.0160 REMARK 3 L13: -0.0280 L23: 0.0010 REMARK 3 S TENSOR REMARK 3 S11: -0.0641 S12: 0.3253 S13: -0.0058 REMARK 3 S21: 0.1574 S22: 0.3650 S23: 1.0302 REMARK 3 S31: -0.0126 S32: -0.3688 S33: 0.0025 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 381 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6982 -22.5163 1.0174 REMARK 3 T TENSOR REMARK 3 T11: 0.1627 T22: 0.2511 REMARK 3 T33: 0.1991 T12: -0.0141 REMARK 3 T13: 0.0136 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.1110 L22: 0.1059 REMARK 3 L33: 0.0512 L12: -0.0641 REMARK 3 L13: -0.0849 L23: -0.0282 REMARK 3 S TENSOR REMARK 3 S11: -0.1255 S12: -0.3280 S13: -0.1920 REMARK 3 S21: -0.0089 S22: 0.1606 S23: 0.1372 REMARK 3 S31: 0.0152 S32: 0.1455 S33: -0.0002 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4957 14.2341 -17.7320 REMARK 3 T TENSOR REMARK 3 T11: 0.2648 T22: 0.3284 REMARK 3 T33: 0.2683 T12: 0.0479 REMARK 3 T13: -0.0081 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 0.0551 L22: 0.0257 REMARK 3 L33: 0.0058 L12: 0.0196 REMARK 3 L13: -0.0244 L23: -0.0096 REMARK 3 S TENSOR REMARK 3 S11: 0.3156 S12: 0.8070 S13: 0.3346 REMARK 3 S21: 0.0301 S22: -0.2160 S23: 0.0149 REMARK 3 S31: -0.2319 S32: -0.2753 S33: 0.0002 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1053 13.2804 -6.1482 REMARK 3 T TENSOR REMARK 3 T11: 0.3776 T22: 0.2694 REMARK 3 T33: 0.2414 T12: 0.0326 REMARK 3 T13: -0.0530 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 0.0375 L22: 0.0405 REMARK 3 L33: 0.0323 L12: -0.0304 REMARK 3 L13: 0.0083 L23: -0.0096 REMARK 3 S TENSOR REMARK 3 S11: -0.1670 S12: -0.2001 S13: 0.2751 REMARK 3 S21: 0.6393 S22: 0.1802 S23: -0.0108 REMARK 3 S31: -0.3773 S32: -0.1237 S33: -0.0012 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2101 9.7323 5.8256 REMARK 3 T TENSOR REMARK 3 T11: 0.5996 T22: 0.3998 REMARK 3 T33: 0.2572 T12: 0.0557 REMARK 3 T13: -0.1612 T23: -0.0471 REMARK 3 L TENSOR REMARK 3 L11: 0.2863 L22: 0.1703 REMARK 3 L33: 0.0226 L12: -0.0788 REMARK 3 L13: 0.0887 L23: -0.0083 REMARK 3 S TENSOR REMARK 3 S11: -0.3525 S12: -0.4578 S13: 0.2103 REMARK 3 S21: 0.2561 S22: 0.0450 S23: 0.1479 REMARK 3 S31: -0.4195 S32: 0.3384 S33: -0.1198 REMARK 3 TLS GROUP : 33 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 116 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6820 8.4166 11.7868 REMARK 3 T TENSOR REMARK 3 T11: 1.3668 T22: 1.3429 REMARK 3 T33: 0.7376 T12: 0.0617 REMARK 3 T13: 0.0404 T23: 0.3331 REMARK 3 L TENSOR REMARK 3 L11: 2.0000 L22: 2.0000 REMARK 3 L33: 2.0001 L12: 1.9999 REMARK 3 L13: 1.9999 L23: 1.9999 REMARK 3 S TENSOR REMARK 3 S11: -0.2880 S12: 7.1496 S13: -4.8149 REMARK 3 S21: -2.9994 S22: 2.5774 S23: -3.1397 REMARK 3 S31: 3.6601 S32: 8.2996 S33: -2.2932 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VPM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000246830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81955 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.61200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: D_1000246826 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM MALONATE PH 5.5, 7.5% PEG REMARK 280 3350, 11% GLYCEROL, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.36500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.24600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.88450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.24600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.36500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.88450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 HIS A -2 REMARK 465 LYS A 117 REMARK 465 GLN A 118 REMARK 465 LYS A 119 REMARK 465 ASN A 120 REMARK 465 GLU A 121 REMARK 465 GLU A 122 REMARK 465 SER A 123 REMARK 465 LYS A 124 REMARK 465 SER A 283 REMARK 465 SER A 284 REMARK 465 ARG A 285 REMARK 465 ARG A 286 REMARK 465 GLY B -4 REMARK 465 ALA B -3 REMARK 465 HIS B -2 REMARK 465 LYS B 117 REMARK 465 GLN B 118 REMARK 465 LYS B 119 REMARK 465 ASN B 120 REMARK 465 GLU B 121 REMARK 465 GLU B 122 REMARK 465 SER B 123 REMARK 465 LYS B 124 REMARK 465 SER B 283 REMARK 465 SER B 284 REMARK 465 ARG B 285 REMARK 465 ARG B 286 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 260 O HOH B 701 1.82 REMARK 500 O HOH A 929 O HOH A 930 1.98 REMARK 500 O HOH B 739 O HOH B 928 1.99 REMARK 500 O HOH A 929 O HOH A 940 2.00 REMARK 500 OE1 GLU A 321 OH TYR B 295 2.02 REMARK 500 O HOH B 712 O HOH B 843 2.03 REMARK 500 O HOH B 776 O HOH B 846 2.09 REMARK 500 O HOH B 843 O HOH B 855 2.09 REMARK 500 O HOH A 785 O HOH A 939 2.10 REMARK 500 O HOH A 864 O HOH A 866 2.11 REMARK 500 O HOH A 857 O HOH A 915 2.11 REMARK 500 O3P AMP B 601 O HOH B 702 2.11 REMARK 500 O HOH B 798 O HOH B 832 2.13 REMARK 500 O HOH B 747 O HOH B 943 2.14 REMARK 500 OH TYR A 295 OE2 GLU B 321 2.17 REMARK 500 NE ARG B 180 O HOH B 703 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 880 O HOH B 708 1455 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 226 -57.99 77.51 REMARK 500 ASP A 256 40.46 -144.21 REMARK 500 ASP A 274 79.19 64.46 REMARK 500 ALA A 281 78.14 -116.52 REMARK 500 ASP B 202 -161.57 -126.42 REMARK 500 SER B 226 -50.37 73.28 REMARK 500 ARG B 255 -0.08 74.53 REMARK 500 ASP B 274 79.80 64.24 REMARK 500 ALA B 281 171.94 -57.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 605 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 7 O REMARK 620 2 GLU A 175 OE1 104.6 REMARK 620 3 ASP B 11 OD2 108.5 101.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 11 OD2 REMARK 620 2 SER B 7 O 115.1 REMARK 620 3 GLU B 175 OE1 102.0 111.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue R74 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLA A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue R74 B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLA B 603 DBREF 6VPM A 7 20 UNP Q9ULW0 TPX2_HUMAN 7 20 DBREF 6VPM A 116 389 UNP O14965 AURKA_HUMAN 116 389 DBREF 6VPM B 7 20 UNP Q9ULW0 TPX2_HUMAN 7 20 DBREF 6VPM B 116 389 UNP O14965 AURKA_HUMAN 116 389 SEQADV 6VPM GLY A -4 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPM ALA A -3 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPM HIS A -2 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPM MET A -1 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPM GLY B -4 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPM ALA B -3 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPM HIS B -2 UNP Q9ULW0 EXPRESSION TAG SEQADV 6VPM MET B -1 UNP Q9ULW0 EXPRESSION TAG SEQRES 1 A 292 GLY ALA HIS MET SER TYR SER TYR ASP ALA PRO SER ASP SEQRES 2 A 292 PHE ILE ASN PHE SER SER LYS GLN LYS ASN GLU GLU SER SEQRES 3 A 292 LYS LYS ARG GLN TRP ALA LEU GLU ASP PHE GLU ILE GLY SEQRES 4 A 292 ARG PRO LEU GLY LYS GLY LYS PHE GLY ASN VAL TYR LEU SEQRES 5 A 292 ALA ARG GLU LYS GLN SER LYS PHE ILE LEU ALA LEU LYS SEQRES 6 A 292 VAL LEU PHE LYS ALA GLN LEU GLU LYS ALA GLY VAL GLU SEQRES 7 A 292 HIS GLN LEU ARG ARG GLU VAL GLU ILE GLN SER HIS LEU SEQRES 8 A 292 ARG HIS PRO ASN ILE LEU ARG LEU TYR GLY TYR PHE HIS SEQRES 9 A 292 ASP ALA THR ARG VAL TYR LEU ILE LEU GLU TYR ALA PRO SEQRES 10 A 292 LEU GLY THR VAL TYR ARG GLU LEU GLN LYS LEU SER LYS SEQRES 11 A 292 PHE ASP GLU GLN ARG THR ALA THR TYR ILE THR GLU LEU SEQRES 12 A 292 ALA ASN ALA LEU SER TYR CYS HIS SER LYS ARG VAL ILE SEQRES 13 A 292 HIS ARG ASP ILE LYS PRO GLU ASN LEU LEU LEU GLY SER SEQRES 14 A 292 ALA GLY GLU LEU LYS ILE ALA ASP PHE GLY TRP SER VAL SEQRES 15 A 292 HIS ALA PRO SER SER ARG ARG THR TPO LEU CYS GLY THR SEQRES 16 A 292 LEU ASP TYR LEU PRO PRO GLU MET ILE GLU GLY ARG MET SEQRES 17 A 292 HIS ASP GLU LYS VAL ASP LEU TRP SER LEU GLY VAL LEU SEQRES 18 A 292 CYS TYR GLU PHE LEU VAL GLY LYS PRO PRO PHE GLU ALA SEQRES 19 A 292 ASN THR TYR GLN GLU THR TYR LYS ARG ILE SER ARG VAL SEQRES 20 A 292 GLU PHE THR PHE PRO ASP PHE VAL THR GLU GLY ALA ARG SEQRES 21 A 292 ASP LEU ILE SER ARG LEU LEU LYS HIS ASN PRO SER GLN SEQRES 22 A 292 ARG PRO MET LEU ARG GLU VAL LEU GLU HIS PRO TRP ILE SEQRES 23 A 292 THR ALA ASN SER SER LYS SEQRES 1 B 292 GLY ALA HIS MET SER TYR SER TYR ASP ALA PRO SER ASP SEQRES 2 B 292 PHE ILE ASN PHE SER SER LYS GLN LYS ASN GLU GLU SER SEQRES 3 B 292 LYS LYS ARG GLN TRP ALA LEU GLU ASP PHE GLU ILE GLY SEQRES 4 B 292 ARG PRO LEU GLY LYS GLY LYS PHE GLY ASN VAL TYR LEU SEQRES 5 B 292 ALA ARG GLU LYS GLN SER LYS PHE ILE LEU ALA LEU LYS SEQRES 6 B 292 VAL LEU PHE LYS ALA GLN LEU GLU LYS ALA GLY VAL GLU SEQRES 7 B 292 HIS GLN LEU ARG ARG GLU VAL GLU ILE GLN SER HIS LEU SEQRES 8 B 292 ARG HIS PRO ASN ILE LEU ARG LEU TYR GLY TYR PHE HIS SEQRES 9 B 292 ASP ALA THR ARG VAL TYR LEU ILE LEU GLU TYR ALA PRO SEQRES 10 B 292 LEU GLY THR VAL TYR ARG GLU LEU GLN LYS LEU SER LYS SEQRES 11 B 292 PHE ASP GLU GLN ARG THR ALA THR TYR ILE THR GLU LEU SEQRES 12 B 292 ALA ASN ALA LEU SER TYR CYS HIS SER LYS ARG VAL ILE SEQRES 13 B 292 HIS ARG ASP ILE LYS PRO GLU ASN LEU LEU LEU GLY SER SEQRES 14 B 292 ALA GLY GLU LEU LYS ILE ALA ASP PHE GLY TRP SER VAL SEQRES 15 B 292 HIS ALA PRO SER SER ARG ARG THR TPO LEU CYS GLY THR SEQRES 16 B 292 LEU ASP TYR LEU PRO PRO GLU MET ILE GLU GLY ARG MET SEQRES 17 B 292 HIS ASP GLU LYS VAL ASP LEU TRP SER LEU GLY VAL LEU SEQRES 18 B 292 CYS TYR GLU PHE LEU VAL GLY LYS PRO PRO PHE GLU ALA SEQRES 19 B 292 ASN THR TYR GLN GLU THR TYR LYS ARG ILE SER ARG VAL SEQRES 20 B 292 GLU PHE THR PHE PRO ASP PHE VAL THR GLU GLY ALA ARG SEQRES 21 B 292 ASP LEU ILE SER ARG LEU LEU LYS HIS ASN PRO SER GLN SEQRES 22 B 292 ARG PRO MET LEU ARG GLU VAL LEU GLU HIS PRO TRP ILE SEQRES 23 B 292 THR ALA ASN SER SER LYS MODRES 6VPM TPO A 288 THR MODIFIED RESIDUE MODRES 6VPM TPO B 288 THR MODIFIED RESIDUE HET TPO A 288 11 HET TPO B 288 11 HET MG A 601 1 HET AMP A 602 23 HET R74 A 603 26 HET MLA A 604 7 HET MG A 605 1 HET AMP B 601 23 HET R74 B 602 26 HET MLA B 603 7 HETNAM TPO PHOSPHOTHREONINE HETNAM MG MAGNESIUM ION HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM R74 N~2~-[(2H-1,3-BENZODIOXOL-5-YL)ACETYL]-N-[(PYRIDIN-4- HETNAM 2 R74 YL)METHYL]-L-CYSTEINAMIDE HETNAM MLA MALONIC ACID HETSYN TPO PHOSPHONOTHREONINE HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 1 TPO 2(C4 H10 N O6 P) FORMUL 3 MG 2(MG 2+) FORMUL 4 AMP 2(C10 H14 N5 O7 P) FORMUL 5 R74 2(C18 H19 N3 O4 S) FORMUL 6 MLA 2(C3 H4 O4) FORMUL 11 HOH *502(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 GLY A 173 1 8 HELIX 3 AA3 VAL A 174 SER A 186 1 13 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 LYS A 250 1 22 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 TPO A 288 THR A 292 1 5 HELIX 8 AA8 PRO A 297 GLY A 303 1 7 HELIX 9 AA9 ARG A 304 GLU A 308 5 5 HELIX 10 AB1 LYS A 309 GLY A 325 1 17 HELIX 11 AB2 THR A 333 ARG A 343 1 11 HELIX 12 AB3 THR A 353 LEU A 364 1 12 HELIX 13 AB4 ASN A 367 ARG A 371 5 5 HELIX 14 AB5 MET A 373 GLU A 379 1 7 HELIX 15 AB6 HIS A 380 SER A 387 1 8 HELIX 16 AB7 ALA B 129 GLU B 131 5 3 HELIX 17 AB8 LYS B 166 GLY B 173 1 8 HELIX 18 AB9 VAL B 174 SER B 186 1 13 HELIX 19 AC1 THR B 217 SER B 226 1 10 HELIX 20 AC2 ASP B 229 LYS B 250 1 22 HELIX 21 AC3 LYS B 258 GLU B 260 5 3 HELIX 22 AC4 TPO B 288 THR B 292 1 5 HELIX 23 AC5 LEU B 293 LEU B 296 5 4 HELIX 24 AC6 PRO B 297 GLY B 303 1 7 HELIX 25 AC7 ARG B 304 GLU B 308 5 5 HELIX 26 AC8 LYS B 309 GLY B 325 1 17 HELIX 27 AC9 THR B 333 VAL B 344 1 12 HELIX 28 AD1 THR B 353 LEU B 364 1 12 HELIX 29 AD2 ASN B 367 ARG B 371 5 5 HELIX 30 AD3 MET B 373 GLU B 379 1 7 HELIX 31 AD4 HIS B 380 SER B 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 GLY A 145 GLU A 152 -1 O VAL A 147 N LEU A 139 SHEET 3 AA1 5 PHE A 157 PHE A 165 -1 O VAL A 163 N ASN A 146 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N PHE A 200 O TYR A 207 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 SHEET 1 AA4 5 PHE B 133 LYS B 141 0 SHEET 2 AA4 5 ASN B 146 GLU B 152 -1 O VAL B 147 N LEU B 139 SHEET 3 AA4 5 ILE B 158 PHE B 165 -1 O VAL B 163 N ASN B 146 SHEET 4 AA4 5 ARG B 205 LEU B 210 -1 O LEU B 210 N ALA B 160 SHEET 5 AA4 5 LEU B 196 HIS B 201 -1 N PHE B 200 O TYR B 207 SHEET 1 AA5 2 VAL B 252 ILE B 253 0 SHEET 2 AA5 2 VAL B 279 HIS B 280 -1 O VAL B 279 N ILE B 253 SHEET 1 AA6 2 LEU B 262 LEU B 264 0 SHEET 2 AA6 2 LEU B 270 ILE B 272 -1 O LYS B 271 N LEU B 263 LINK C THR A 287 N TPO A 288 1555 1555 1.34 LINK C TPO A 288 N LEU A 289 1555 1555 1.33 LINK SG CYS A 290 SAZ R74 A 603 1555 1555 2.05 LINK C THR B 287 N TPO B 288 1555 1555 1.33 LINK C TPO B 288 N LEU B 289 1555 1555 1.33 LINK SG CYS B 290 SAZ R74 B 602 1555 1555 2.07 LINK O SER A 7 MG MG A 605 1555 1555 2.58 LINK OD2 ASP A 11 MG MG A 601 1555 1555 2.55 LINK OE1 GLU A 175 MG MG A 605 1555 1555 2.37 LINK MG MG A 601 O SER B 7 1555 1555 2.50 LINK MG MG A 601 OE1 GLU B 175 1555 1555 2.50 LINK MG MG A 605 OD2 ASP B 11 1555 1555 2.56 SITE 1 AC1 5 ASP A 11 SER B 7 GLU B 175 HIS B 176 SITE 2 AC1 5 ARG B 179 SITE 1 AC2 12 LEU A 139 GLY A 140 LYS A 162 LEU A 194 SITE 2 AC2 12 GLU A 211 TYR A 212 ALA A 213 THR A 217 SITE 3 AC2 12 HOH A 702 HOH A 707 HOH A 818 HOH A 852 SITE 1 AC3 10 SER A 116 LEU A 289 CYS A 290 LEU A 296 SITE 2 AC3 10 MET A 300 ILE A 301 HIS A 306 ARG B 255 SITE 3 AC3 10 MET B 305 TYR B 338 SITE 1 AC4 6 ARG A 304 HIS A 366 ASN A 367 HOH A 723 SITE 2 AC4 6 HOH A 753 HOH A 863 SITE 1 AC5 5 SER A 7 GLU A 175 HIS A 176 ARG A 179 SITE 2 AC5 5 ASP B 11 SITE 1 AC6 11 GLY B 140 GLY B 142 ALA B 160 LYS B 162 SITE 2 AC6 11 LEU B 194 GLU B 211 ALA B 213 HOH B 702 SITE 3 AC6 11 HOH B 717 HOH B 749 HOH B 881 SITE 1 AC7 6 MET A 305 LEU B 289 CYS B 290 MET B 300 SITE 2 AC7 6 ILE B 301 HIS B 306 SITE 1 AC8 4 ARG B 304 HIS B 366 ASN B 367 HOH B 728 CRYST1 50.730 85.769 152.492 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019712 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011659 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006558 0.00000