HEADER BIOSYNTHETIC PROTEIN 10-FEB-20 6VS6 TITLE MYCOBACTERIUM TUBERCULOSIS DIHYDROFOLATE REDUCTASE IN COMPLEX WITH 3- TITLE 2 (FURAN-2-YL)-1-METHYL-1H-PYRAZOLE-5-CARBOXYLIC ACID (FRAGMENT 2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.5.1.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: FOLA, ERS023446_01268, ERS027651_02380, SAMEA2682864_02011, SOURCE 5 SAMEA2683035_01637; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS FOLATE PATHWAY, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.A.RIBEIRO,M.V.B.DIAS REVDAT 3 11-OCT-23 6VS6 1 REMARK REVDAT 2 26-AUG-20 6VS6 1 JRNL LINK REVDAT 1 15-JUL-20 6VS6 0 JRNL AUTH J.A.RIBEIRO,A.HAMMER,G.A.LIBREROS-ZUNIGA,S.M.CHAVEZ-PACHECO, JRNL AUTH 2 P.TYRAKIS,G.S.DE OLIVEIRA,T.KIRKMAN,J.EL BAKALI,S.A.ROCCO, JRNL AUTH 3 M.L.SFORCA,R.PARISE-FILHO,A.G.COYNE,T.L.BLUNDELL,C.ABELL, JRNL AUTH 4 M.V.B.DIAS JRNL TITL USING A FRAGMENT-BASED APPROACH TO IDENTIFY ALTERNATIVE JRNL TITL 2 CHEMICAL SCAFFOLDS TARGETING DIHYDROFOLATE REDUCTASE JRNL TITL 3 FROMMYCOBACTERIUM TUBERCULOSIS. JRNL REF ACS INFECT DIS. V. 6 2192 2020 JRNL REFN ESSN 2373-8227 JRNL PMID 32603583 JRNL DOI 10.1021/ACSINFECDIS.0C00263 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 26630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1278 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 17.3120 - 3.8425 0.95 3002 153 0.1270 0.1583 REMARK 3 2 3.8425 - 3.0554 0.95 2877 144 0.1460 0.2087 REMARK 3 3 3.0554 - 2.6707 0.95 2839 140 0.1855 0.2304 REMARK 3 4 2.6707 - 2.4273 0.96 2840 129 0.2006 0.2578 REMARK 3 5 2.4273 - 2.2537 0.95 2810 160 0.2145 0.2752 REMARK 3 6 2.2537 - 2.1211 0.95 2793 149 0.2272 0.2671 REMARK 3 7 2.1211 - 2.0150 0.95 2811 145 0.2465 0.2994 REMARK 3 8 2.0150 - 1.9274 0.95 2772 139 0.2640 0.3064 REMARK 3 9 1.9274 - 1.8533 0.87 2569 115 0.2957 0.3041 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.2800 REMARK 3 OPERATOR: -H,L,K REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2697 REMARK 3 ANGLE : 1.047 3693 REMARK 3 CHIRALITY : 0.054 389 REMARK 3 PLANARITY : 0.007 470 REMARK 3 DIHEDRAL : 18.679 1527 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 53.5052 70.4375 17.9990 REMARK 3 T TENSOR REMARK 3 T11: 0.1450 T22: 0.1456 REMARK 3 T33: 0.1579 T12: 0.0096 REMARK 3 T13: 0.0142 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.6903 L22: 0.1659 REMARK 3 L33: 0.2401 L12: 0.2560 REMARK 3 L13: 0.1725 L23: -0.0858 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: 0.0099 S13: -0.0143 REMARK 3 S21: 0.0017 S22: -0.0109 S23: -0.0452 REMARK 3 S31: 0.0039 S32: 0.0104 S33: 0.0069 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VS6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000246978. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26688 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 46.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.13700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.70700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1DF7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, 100 MM MES (2 REMARK 280 -(N-MORPHOLINO) ETHANESULFONIC ACID), PH 6.5, 10 MM COCL2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.58000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.71350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.28950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.71350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.58000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.28950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 THR A 0 REMARK 465 MET B -1 REMARK 465 THR B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 157 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 77 O HOH B 301 1.98 REMARK 500 O HOH B 308 O HOH B 430 2.05 REMARK 500 O HOH A 314 O HOH B 422 2.10 REMARK 500 NH1 ARG A 143 OE2 GLU B 138 2.10 REMARK 500 O HOH B 396 O HOH B 442 2.11 REMARK 500 O HOH B 363 O HOH B 411 2.11 REMARK 500 OG1 THR A 91 O HOH A 301 2.12 REMARK 500 O HOH A 349 O HOH A 412 2.15 REMARK 500 O PRO A 105 O HOH A 302 2.15 REMARK 500 O HOH A 421 O HOH B 448 2.16 REMARK 500 OE1 GLN A 68 O HOH A 303 2.17 REMARK 500 O HOH B 423 O HOH B 426 2.18 REMARK 500 O HOH A 364 O HOH A 393 2.19 REMARK 500 O HOH B 401 O HOH B 427 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 395 O HOH B 398 2675 1.99 REMARK 500 O HOH A 393 O HOH B 438 2675 1.99 REMARK 500 O HOH A 363 O HOH A 410 2775 2.01 REMARK 500 O HOH A 420 O HOH B 429 3755 2.05 REMARK 500 O HOH A 328 O HOH B 398 2675 2.06 REMARK 500 O HOH B 351 O HOH B 398 2675 2.09 REMARK 500 O HOH A 418 O HOH B 414 3755 2.12 REMARK 500 O HOH A 401 O HOH A 409 3755 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 21 41.76 -82.11 REMARK 500 ASP A 132 -147.95 -87.40 REMARK 500 ASP B 19 -158.88 -141.35 REMARK 500 PRO B 21 37.27 -79.93 REMARK 500 LEU B 86 42.36 -94.49 REMARK 500 ASP B 116 69.63 -69.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 88 PRO A 89 149.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 419 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A 420 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A 421 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH A 422 DISTANCE = 8.16 ANGSTROMS REMARK 525 HOH B 448 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B 449 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B 450 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH B 451 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH B 452 DISTANCE = 6.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 203 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 38 NE2 REMARK 620 2 HOH A 327 O 89.5 REMARK 620 3 HOH A 328 O 91.8 173.5 REMARK 620 4 HOH A 340 O 87.8 98.9 74.8 REMARK 620 5 HOH B 351 O 92.6 88.0 98.3 173.1 REMARK 620 6 HOH B 388 O 165.4 86.4 90.7 79.0 101.3 REMARK 620 7 HOH B 398 O 90.2 138.2 48.2 122.9 50.2 102.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 202 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 157 NE2 REMARK 620 2 HIS B 38 NE2 174.2 REMARK 620 3 HOH B 313 O 87.9 92.8 REMARK 620 4 HOH B 333 O 87.2 87.1 109.2 REMARK 620 5 HOH B 372 O 91.5 94.2 77.6 173.0 REMARK 620 6 HOH B 373 O 95.4 84.4 174.1 75.9 97.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RKV A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RKV B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 203 DBREF1 6VS6 A -1 159 UNP A0A0E8UVJ4_MYCTX DBREF2 6VS6 A A0A0E8UVJ4 1 161 DBREF1 6VS6 B -1 159 UNP A0A0E8UVJ4_MYCTX DBREF2 6VS6 B A0A0E8UVJ4 1 161 SEQRES 1 A 161 MET THR MET VAL GLY LEU ILE TRP ALA GLN ALA THR SER SEQRES 2 A 161 GLY VAL ILE GLY ARG GLY GLY ASP ILE PRO TRP ARG LEU SEQRES 3 A 161 PRO GLU ASP GLN ALA HIS PHE ARG GLU ILE THR MET GLY SEQRES 4 A 161 HIS THR ILE VAL MET GLY ARG ARG THR TRP ASP SER LEU SEQRES 5 A 161 PRO ALA LYS VAL ARG PRO LEU PRO GLY ARG ARG ASN VAL SEQRES 6 A 161 VAL LEU SER ARG GLN ALA ASP PHE MET ALA SER GLY ALA SEQRES 7 A 161 GLU VAL VAL GLY SER LEU GLU GLU ALA LEU THR SER PRO SEQRES 8 A 161 GLU THR TRP VAL ILE GLY GLY GLY GLN VAL TYR ALA LEU SEQRES 9 A 161 ALA LEU PRO TYR ALA THR ARG CYS GLU VAL THR GLU VAL SEQRES 10 A 161 ASP ILE GLY LEU PRO ARG GLU ALA GLY ASP ALA LEU ALA SEQRES 11 A 161 PRO VAL LEU ASP GLU THR TRP ARG GLY GLU THR GLY GLU SEQRES 12 A 161 TRP ARG PHE SER ARG SER GLY LEU ARG TYR ARG LEU TYR SEQRES 13 A 161 SER TYR HIS ARG SER SEQRES 1 B 161 MET THR MET VAL GLY LEU ILE TRP ALA GLN ALA THR SER SEQRES 2 B 161 GLY VAL ILE GLY ARG GLY GLY ASP ILE PRO TRP ARG LEU SEQRES 3 B 161 PRO GLU ASP GLN ALA HIS PHE ARG GLU ILE THR MET GLY SEQRES 4 B 161 HIS THR ILE VAL MET GLY ARG ARG THR TRP ASP SER LEU SEQRES 5 B 161 PRO ALA LYS VAL ARG PRO LEU PRO GLY ARG ARG ASN VAL SEQRES 6 B 161 VAL LEU SER ARG GLN ALA ASP PHE MET ALA SER GLY ALA SEQRES 7 B 161 GLU VAL VAL GLY SER LEU GLU GLU ALA LEU THR SER PRO SEQRES 8 B 161 GLU THR TRP VAL ILE GLY GLY GLY GLN VAL TYR ALA LEU SEQRES 9 B 161 ALA LEU PRO TYR ALA THR ARG CYS GLU VAL THR GLU VAL SEQRES 10 B 161 ASP ILE GLY LEU PRO ARG GLU ALA GLY ASP ALA LEU ALA SEQRES 11 B 161 PRO VAL LEU ASP GLU THR TRP ARG GLY GLU THR GLY GLU SEQRES 12 B 161 TRP ARG PHE SER ARG SER GLY LEU ARG TYR ARG LEU TYR SEQRES 13 B 161 SER TYR HIS ARG SER HET NDP A 201 48 HET CO A 202 1 HET CO A 203 1 HET RKV A 204 14 HET PO4 A 205 5 HET NDP B 201 48 HET RKV B 202 14 HET PO4 B 203 5 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM CO COBALT (II) ION HETNAM RKV 3-(FURAN-2-YL)-1-METHYL-1H-PYRAZOLE-5-CARBOXYLIC ACID HETNAM PO4 PHOSPHATE ION FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 CO 2(CO 2+) FORMUL 6 RKV 2(C9 H8 N2 O3) FORMUL 7 PO4 2(O4 P 3-) FORMUL 11 HOH *274(H2 O) HELIX 1 AA1 LEU A 24 MET A 36 1 13 HELIX 2 AA2 ARG A 44 LEU A 50 1 7 HELIX 3 AA3 PRO A 51 ARG A 55 5 5 HELIX 4 AA4 SER A 81 LEU A 86 1 6 HELIX 5 AA5 GLY A 96 LEU A 104 1 9 HELIX 6 AA6 PRO A 105 ALA A 107 5 3 HELIX 7 AA7 LEU B 24 MET B 36 1 13 HELIX 8 AA8 ARG B 44 LEU B 50 1 7 HELIX 9 AA9 SER B 81 LEU B 86 5 6 HELIX 10 AB1 GLY B 96 LEU B 104 1 9 SHEET 1 AA1 8 GLU A 77 VAL A 79 0 SHEET 2 AA1 8 ARG A 61 LEU A 65 1 N VAL A 64 O GLU A 77 SHEET 3 AA1 8 THR A 39 GLY A 43 1 N MET A 42 O LEU A 65 SHEET 4 AA1 8 THR A 91 VAL A 93 1 O TRP A 92 N THR A 39 SHEET 5 AA1 8 VAL A 2 ALA A 9 1 N GLY A 3 O VAL A 93 SHEET 6 AA1 8 ARG A 109 ASP A 116 1 O VAL A 115 N GLN A 8 SHEET 7 AA1 8 ARG A 150 HIS A 157 -1 O TYR A 154 N VAL A 112 SHEET 8 AA1 8 ARG A 136 THR A 139 -1 N ARG A 136 O HIS A 157 SHEET 1 AA2 8 GLU A 77 VAL A 79 0 SHEET 2 AA2 8 ARG A 61 LEU A 65 1 N VAL A 64 O GLU A 77 SHEET 3 AA2 8 THR A 39 GLY A 43 1 N MET A 42 O LEU A 65 SHEET 4 AA2 8 THR A 91 VAL A 93 1 O TRP A 92 N THR A 39 SHEET 5 AA2 8 VAL A 2 ALA A 9 1 N GLY A 3 O VAL A 93 SHEET 6 AA2 8 ARG A 109 ASP A 116 1 O VAL A 115 N GLN A 8 SHEET 7 AA2 8 ARG A 150 HIS A 157 -1 O TYR A 154 N VAL A 112 SHEET 8 AA2 8 ARG A 143 PHE A 144 -1 N ARG A 143 O TYR A 151 SHEET 1 AA3 2 VAL A 13 GLY A 15 0 SHEET 2 AA3 2 ALA A 126 LEU A 127 -1 O ALA A 126 N ILE A 14 SHEET 1 AA4 8 GLU B 77 VAL B 79 0 SHEET 2 AA4 8 ARG B 61 LEU B 65 1 N VAL B 64 O GLU B 77 SHEET 3 AA4 8 THR B 39 GLY B 43 1 N MET B 42 O LEU B 65 SHEET 4 AA4 8 THR B 91 GLY B 95 1 O TRP B 92 N THR B 39 SHEET 5 AA4 8 VAL B 2 ALA B 9 1 N GLY B 3 O VAL B 93 SHEET 6 AA4 8 ALA B 107 VAL B 115 1 O VAL B 115 N GLN B 8 SHEET 7 AA4 8 ARG B 150 HIS B 157 -1 O TYR B 154 N VAL B 112 SHEET 8 AA4 8 ARG B 136 THR B 139 -1 N ARG B 136 O HIS B 157 SHEET 1 AA5 8 GLU B 77 VAL B 79 0 SHEET 2 AA5 8 ARG B 61 LEU B 65 1 N VAL B 64 O GLU B 77 SHEET 3 AA5 8 THR B 39 GLY B 43 1 N MET B 42 O LEU B 65 SHEET 4 AA5 8 THR B 91 GLY B 95 1 O TRP B 92 N THR B 39 SHEET 5 AA5 8 VAL B 2 ALA B 9 1 N GLY B 3 O VAL B 93 SHEET 6 AA5 8 ALA B 107 VAL B 115 1 O VAL B 115 N GLN B 8 SHEET 7 AA5 8 ARG B 150 HIS B 157 -1 O TYR B 154 N VAL B 112 SHEET 8 AA5 8 ARG B 143 PHE B 144 -1 N ARG B 143 O TYR B 151 SHEET 1 AA6 2 VAL B 13 GLY B 15 0 SHEET 2 AA6 2 ALA B 126 LEU B 127 -1 O ALA B 126 N ILE B 14 LINK NE2 HIS A 38 CO CO A 203 1555 1555 2.09 LINK NE2 HIS A 157 CO CO A 202 1555 1555 2.07 LINK CO CO A 202 NE2 HIS B 38 1555 1555 2.13 LINK CO CO A 202 O HOH B 313 1555 1555 2.08 LINK CO CO A 202 O HOH B 333 1555 1555 2.23 LINK CO CO A 202 O HOH B 372 1555 1555 2.06 LINK CO CO A 202 O HOH B 373 1555 1555 2.13 LINK CO CO A 203 O HOH A 327 1555 1555 2.31 LINK CO CO A 203 O HOH A 328 1555 1555 2.38 LINK CO CO A 203 O HOH A 340 1555 1555 1.79 LINK CO CO A 203 O HOH B 351 1555 1555 2.22 LINK CO CO A 203 O HOH B 388 1555 1555 1.88 LINK CO CO A 203 O HOH B 398 1555 2675 2.63 CISPEP 1 ARG A 55 PRO A 56 0 -1.34 CISPEP 2 GLY A 95 GLY A 96 0 -0.09 CISPEP 3 ARG B 55 PRO B 56 0 -2.91 CISPEP 4 GLY B 95 GLY B 96 0 -1.12 SITE 1 AC1 32 TRP A 6 ALA A 7 ILE A 14 GLY A 15 SITE 2 AC1 32 ARG A 16 GLY A 18 ASP A 19 ILE A 20 SITE 3 AC1 32 GLY A 43 ARG A 44 ARG A 45 THR A 46 SITE 4 AC1 32 LEU A 65 SER A 66 ARG A 67 GLN A 68 SITE 5 AC1 32 GLY A 80 ILE A 94 GLY A 95 GLY A 96 SITE 6 AC1 32 GLY A 97 GLN A 98 VAL A 99 TYR A 100 SITE 7 AC1 32 LEU A 102 HOH A 306 HOH A 329 HOH A 333 SITE 8 AC1 32 HOH A 334 HOH A 335 HOH A 343 HOH A 348 SITE 1 AC2 6 HIS A 157 HIS B 38 HOH B 313 HOH B 333 SITE 2 AC2 6 HOH B 372 HOH B 373 SITE 1 AC3 7 HIS A 38 HOH A 327 HOH A 328 HOH A 340 SITE 2 AC3 7 HOH B 351 HOH B 388 HOH B 398 SITE 1 AC4 8 ASP A 19 ILE A 20 ARG A 23 GLN A 28 SITE 2 AC4 8 PHE A 31 HOH A 306 HOH A 372 HOH A 392 SITE 1 AC5 2 ARG A 44 ARG A 45 SITE 1 AC6 33 TRP B 6 ALA B 7 ILE B 14 GLY B 15 SITE 2 AC6 33 ARG B 16 GLY B 18 ASP B 19 ILE B 20 SITE 3 AC6 33 GLY B 43 ARG B 44 ARG B 45 THR B 46 SITE 4 AC6 33 LEU B 65 SER B 66 ARG B 67 GLN B 68 SITE 5 AC6 33 GLY B 80 ILE B 94 GLY B 96 GLY B 97 SITE 6 AC6 33 GLN B 98 VAL B 99 TYR B 100 LEU B 102 SITE 7 AC6 33 ALA B 126 HOH B 308 HOH B 339 HOH B 346 SITE 8 AC6 33 HOH B 350 HOH B 354 HOH B 370 HOH B 376 SITE 9 AC6 33 HOH B 379 SITE 1 AC7 5 GLN B 28 ARG B 32 VAL B 54 PRO B 58 SITE 2 AC7 5 ARG B 60 SITE 1 AC8 4 ARG A 32 PRO A 58 ARG B 23 PRO B 51 CRYST1 61.160 70.579 71.427 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016351 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014169 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014000 0.00000