HEADER LIGASE 12-FEB-20 6VT1 TITLE NAEGLERIA GRUBERI RNA LIGASE D172A MUTANT APO COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA LIGASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NAEGLERIA GRUBERI; SOURCE 3 ORGANISM_COMMON: AMOEBA; SOURCE 4 ORGANISM_TAXID: 5762; SOURCE 5 GENE: NAEGRDRAFT_82186; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RNA REPAIR, ADENYLYLTRANSFERASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.UNCIULEAC,Y.GOLDGUR,S.SHUMAN REVDAT 4 11-OCT-23 6VT1 1 REMARK REVDAT 3 10-JUN-20 6VT1 1 JRNL REVDAT 2 06-MAY-20 6VT1 1 JRNL REVDAT 1 08-APR-20 6VT1 0 JRNL AUTH M.C.UNCIULEAC,Y.GOLDGUR,S.SHUMAN JRNL TITL CAVEAT MUTATOR: ALANINE SUBSTITUTIONS FOR CONSERVED AMINO JRNL TITL 2 ACIDS IN RNA LIGASE ELICIT UNEXPECTED REARRANGEMENTS OF THE JRNL TITL 3 ACTIVE SITE FOR LYSINE ADENYLYLATION. JRNL REF NUCLEIC ACIDS RES. V. 48 5603 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 32315072 JRNL DOI 10.1093/NAR/GKAA238 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1-3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 115094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 3679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0000 - 7.0456 0.97 4401 167 0.1663 0.1908 REMARK 3 2 7.0456 - 5.5949 0.94 4263 142 0.2055 0.1881 REMARK 3 3 5.5949 - 4.8884 0.96 4413 146 0.1876 0.2109 REMARK 3 4 4.8884 - 4.4418 0.93 4193 149 0.1762 0.2242 REMARK 3 5 4.4418 - 4.1236 0.94 4306 131 0.1813 0.2084 REMARK 3 6 4.1236 - 3.8806 0.96 4327 146 0.2077 0.2482 REMARK 3 7 3.8806 - 3.6863 0.96 4389 143 0.2174 0.2790 REMARK 3 8 3.6863 - 3.5259 0.96 4400 151 0.2296 0.2894 REMARK 3 9 3.5259 - 3.3902 0.91 4112 134 0.2366 0.3469 REMARK 3 10 3.3902 - 3.2732 0.95 4337 134 0.2583 0.2577 REMARK 3 11 3.2732 - 3.1709 0.96 4393 147 0.2603 0.3382 REMARK 3 12 3.1709 - 3.0803 0.97 4424 142 0.2857 0.3378 REMARK 3 13 3.0803 - 2.9992 0.98 4426 149 0.2772 0.3210 REMARK 3 14 2.9992 - 2.9260 0.97 4431 150 0.2786 0.3399 REMARK 3 15 2.9260 - 2.8595 0.98 4402 142 0.2861 0.3795 REMARK 3 16 2.8595 - 2.7987 0.94 4256 143 0.3049 0.3974 REMARK 3 17 2.7987 - 2.7427 0.95 4347 136 0.3086 0.3519 REMARK 3 18 2.7427 - 2.6909 0.96 4379 148 0.3051 0.3519 REMARK 3 19 2.6909 - 2.6429 0.97 4444 150 0.3291 0.4158 REMARK 3 20 2.6429 - 2.5981 0.98 4402 145 0.3195 0.3812 REMARK 3 21 2.5981 - 2.5562 0.97 4444 121 0.3133 0.3445 REMARK 3 22 2.5562 - 2.5168 0.97 4407 180 0.3104 0.3678 REMARK 3 23 2.5168 - 2.4798 0.97 4447 133 0.3133 0.3847 REMARK 3 24 2.4798 - 2.4449 0.96 4369 131 0.3044 0.3754 REMARK 3 25 2.4449 - 2.4119 0.93 4181 138 0.3247 0.3455 REMARK 3 26 2.4119 - 2.3810 0.55 2522 81 0.3381 0.3731 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 4172 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 4172 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN D REMARK 3 ATOM PAIRS NUMBER : 4172 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VT1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000247033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 115094 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5COT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE NGRRNLD172A PROTEIN SAMPLE (12 REMARK 280 MG/ML) WAS MIXED WITH EQUAL VOLUME (1 UL) OF 0.1 M HEPES PH 6.5, REMARK 280 30% PEG6000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 62.63550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.09150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 62.63550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.09150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 SER B 0 REMARK 465 SER C 0 REMARK 465 SER D 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU C 133 NH1 ARG C 195 1.40 REMARK 500 OE1 GLU C 133 CZ ARG C 195 1.61 REMARK 500 NZ LYS D 170 O2P AMP D 401 1.69 REMARK 500 OD1 ASP C 146 NH2 ARG C 190 1.77 REMARK 500 OE1 GLU C 133 NH2 ARG C 195 1.77 REMARK 500 OE1 GLU B 25 O HOH B 501 1.84 REMARK 500 NH1 ARG D 85 OE2 GLU D 334 1.84 REMARK 500 NH1 ARG D 85 OE1 GLU D 334 1.85 REMARK 500 O HOH A 566 O HOH A 568 1.90 REMARK 500 OG1 THR A 260 O HOH A 501 1.92 REMARK 500 O THR C 145 O3' AMP C 401 1.94 REMARK 500 NZ LYS A 170 O2P AMP A 401 1.96 REMARK 500 N GLU A 263 O HOH A 501 1.96 REMARK 500 O ALA B 172 O HOH B 502 1.99 REMARK 500 NH1 ARG D 85 CD GLU D 334 1.99 REMARK 500 O HOH A 570 O HOH A 572 2.03 REMARK 500 OD2 ASP A 146 NH2 ARG A 190 2.05 REMARK 500 OD1 ASP B 99 O HOH B 503 2.06 REMARK 500 O GLY C 275 O HOH C 501 2.07 REMARK 500 OE2 GLU A 238 OG SER A 304 2.08 REMARK 500 O SER A 175 O HOH A 502 2.09 REMARK 500 OE2 GLU D 193 O HOH D 501 2.11 REMARK 500 O LYS D 5 O HOH D 502 2.12 REMARK 500 SG CYS D 188 O HOH D 554 2.13 REMARK 500 N ASN C 191 O HOH C 502 2.15 REMARK 500 O LYS A 337 O HOH A 503 2.15 REMARK 500 O LEU C 215 O HOH C 503 2.18 REMARK 500 O SER D 67 O HOH D 503 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 115 CG GLU B 115 CD -0.115 REMARK 500 GLU D 133 CB GLU D 133 CG 0.157 REMARK 500 CYS D 188 CB CYS D 188 SG -0.099 REMARK 500 ARG D 195 CZ ARG D 195 NH1 0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 269 CB - CG - CD ANGL. DEV. = -16.1 DEGREES REMARK 500 LYS A 307 CD - CE - NZ ANGL. DEV. = 17.1 DEGREES REMARK 500 ARG A 339 CB - CG - CD ANGL. DEV. = 16.7 DEGREES REMARK 500 ARG B 46 CG - CD - NE ANGL. DEV. = 19.8 DEGREES REMARK 500 ARG B 46 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 GLU B 115 CA - CB - CG ANGL. DEV. = -22.9 DEGREES REMARK 500 ARG B 208 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 GLU C 22 CA - CB - CG ANGL. DEV. = 19.8 DEGREES REMARK 500 LYS C 42 CD - CE - NZ ANGL. DEV. = 14.5 DEGREES REMARK 500 ARG C 82 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 82 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 LYS C 210 CA - CB - CG ANGL. DEV. = -15.9 DEGREES REMARK 500 ARG D 100 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 ARG D 100 CB - CG - CD ANGL. DEV. = -17.0 DEGREES REMARK 500 ARG D 100 CG - CD - NE ANGL. DEV. = 17.9 DEGREES REMARK 500 ARG D 100 CD - NE - CZ ANGL. DEV. = 8.8 DEGREES REMARK 500 ARG D 100 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG D 190 CG - CD - NE ANGL. DEV. = -12.8 DEGREES REMARK 500 ARG D 195 CA - CB - CG ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG D 195 CB - CG - CD ANGL. DEV. = -20.0 DEGREES REMARK 500 ARG D 195 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 HIS D 204 N - CA - CB ANGL. DEV. = -12.0 DEGREES REMARK 500 ARG D 208 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG D 208 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ILE D 233 CG1 - CB - CG2 ANGL. DEV. = -16.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 3 109.34 83.93 REMARK 500 ASP A 30 -131.16 49.26 REMARK 500 ASP A 53 -6.40 84.86 REMARK 500 ASP A 59 113.11 -163.81 REMARK 500 ASP A 182 -126.03 57.75 REMARK 500 GLN A 234 49.53 36.90 REMARK 500 ASN A 290 60.90 -153.68 REMARK 500 ASP A 338 50.55 -96.54 REMARK 500 GLU B 22 -22.82 -151.57 REMARK 500 ASP B 30 -132.33 48.91 REMARK 500 ASP B 53 -6.22 83.42 REMARK 500 ASP B 59 113.27 -162.60 REMARK 500 VAL B 109 132.29 -37.96 REMARK 500 PRO B 125 98.54 -59.98 REMARK 500 SER B 127 -140.92 -110.67 REMARK 500 LEU B 130 137.86 -22.04 REMARK 500 THR B 145 61.10 -111.84 REMARK 500 ASP B 182 -125.41 58.37 REMARK 500 GLN B 234 48.16 37.30 REMARK 500 ASN B 290 59.21 -151.54 REMARK 500 HIS B 336 72.32 -105.18 REMARK 500 VAL C 3 80.39 76.08 REMARK 500 LYS C 5 63.08 -114.23 REMARK 500 ASP C 30 -130.94 49.03 REMARK 500 ASP C 53 -8.04 83.31 REMARK 500 ASP C 59 119.72 -164.37 REMARK 500 THR C 145 61.75 -109.46 REMARK 500 ASP C 182 -121.70 57.46 REMARK 500 GLU C 196 123.17 -13.13 REMARK 500 LYS C 210 52.17 39.17 REMARK 500 GLN C 234 49.01 35.30 REMARK 500 ASN C 290 60.17 -153.07 REMARK 500 HIS C 336 52.13 -106.05 REMARK 500 LYS C 337 6.71 -57.57 REMARK 500 VAL D 3 -1.97 66.26 REMARK 500 LYS D 5 34.40 71.60 REMARK 500 ASP D 30 -132.27 48.52 REMARK 500 ASP D 53 -7.73 83.53 REMARK 500 ASP D 59 111.68 -162.60 REMARK 500 ARG D 100 50.69 -103.04 REMARK 500 ASP D 182 -123.97 57.05 REMARK 500 ALA D 198 0.93 -66.34 REMARK 500 ASN D 290 61.48 -154.10 REMARK 500 SER D 304 -158.58 -96.71 REMARK 500 HIS D 336 59.70 -107.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 21 GLU B 22 -142.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 46 0.09 SIDE CHAIN REMARK 500 GLU D 133 0.07 SIDE CHAIN REMARK 500 HIS D 204 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide AMP B 401 and LYS B REMARK 800 170 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide AMP C 401 and LYS C REMARK 800 170 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide AMP D 401 and LYS D REMARK 800 170 DBREF 6VT1 A 1 339 UNP D2W2Z5 D2W2Z5_NAEGR 1 339 DBREF 6VT1 B 1 339 UNP D2W2Z5 D2W2Z5_NAEGR 1 339 DBREF 6VT1 C 1 339 UNP D2W2Z5 D2W2Z5_NAEGR 1 339 DBREF 6VT1 D 1 339 UNP D2W2Z5 D2W2Z5_NAEGR 1 339 SEQADV 6VT1 SER A 0 UNP D2W2Z5 EXPRESSION TAG SEQADV 6VT1 ALA A 172 UNP D2W2Z5 ASP 172 ENGINEERED MUTATION SEQADV 6VT1 SER B 0 UNP D2W2Z5 EXPRESSION TAG SEQADV 6VT1 ALA B 172 UNP D2W2Z5 ASP 172 ENGINEERED MUTATION SEQADV 6VT1 SER C 0 UNP D2W2Z5 EXPRESSION TAG SEQADV 6VT1 ALA C 172 UNP D2W2Z5 ASP 172 ENGINEERED MUTATION SEQADV 6VT1 SER D 0 UNP D2W2Z5 EXPRESSION TAG SEQADV 6VT1 ALA D 172 UNP D2W2Z5 ASP 172 ENGINEERED MUTATION SEQRES 1 A 340 SER MET GLY VAL ARG LYS LEU ALA THR ILE ARG THR ALA SEQRES 2 A 340 GLY GLU ILE THR PRO ILE ALA GLY ALA GLU ALA ILE GLU SEQRES 3 A 340 CYS CYS HIS VAL ASP GLY TRP THR CYS VAL ILE LYS LYS SEQRES 4 A 340 GLY GLU PHE LYS GLN GLY ASP ARG GLY VAL TYR PHE GLU SEQRES 5 A 340 ILE ASP SER PHE ILE LYS GLU ASP ASN ASP ARG TYR PRO SEQRES 6 A 340 MET LEU SER LYS GLN VAL ILE ASP TYR GLU GLY GLN ARG SEQRES 7 A 340 GLY THR ARG LEU ARG THR ALA ARG LEU ARG GLY GLN LEU SEQRES 8 A 340 SER GLN GLY LEU PHE LEU PRO MET ASP ARG PHE PRO GLU SEQRES 9 A 340 LEU ALA SER ASN GLN VAL GLY ASP ASP VAL THR GLU ILE SEQRES 10 A 340 LEU GLY ILE THR LYS TRP GLU PRO PRO ILE SER THR ASN SEQRES 11 A 340 LEU SER GLY GLU ILE LEU GLY GLU PHE PRO THR PHE ILE SEQRES 12 A 340 SER LYS THR ASP GLN GLU ARG VAL GLN ASN LEU ILE PRO SEQRES 13 A 340 GLN ILE GLU GLU ASN LYS GLY GLN LYS PHE GLU VAL THR SEQRES 14 A 340 VAL LYS LEU ALA GLY SER SER MET THR VAL TYR ARG LYS SEQRES 15 A 340 ASP ASP HIS ILE GLY VAL CYS GLY ARG ASN TRP GLU LEU SEQRES 16 A 340 ARG GLU THR ALA THR ASN ALA GLN TRP HIS ALA ALA ARG SEQRES 17 A 340 ARG ASN LYS MET ILE GLU GLY LEU GLN PHE LEU ASN ARG SEQRES 18 A 340 ASN LEU ALA LEU GLN GLY GLU ILE ILE GLY GLU SER ILE SEQRES 19 A 340 GLN GLY ASN LEU GLU LYS LEU LYS GLY GLN ASP PHE TYR SEQRES 20 A 340 LEU PHE ASP ILE TYR ASP ILE ASP LYS ALA GLN TYR LEU SEQRES 21 A 340 THR PRO ILE GLU ARG GLN SER LEU VAL LYS GLN LEU ASN SEQRES 22 A 340 ASP ASN GLY PHE THR VAL LYS HIS VAL PRO ILE LEU ASP SEQRES 23 A 340 ASP LEU GLU LEU ASN HIS THR ALA GLU GLN ILE LEU ALA SEQRES 24 A 340 MET ALA ASP GLY PRO SER LEU ASN LYS ASN VAL LYS ARG SEQRES 25 A 340 GLU GLY LEU VAL PHE LYS ARG LEU ASP GLY LYS PHE SER SEQRES 26 A 340 PHE LYS ALA ILE SER ASN ALA TYR LEU GLU LYS HIS LYS SEQRES 27 A 340 ASP ARG SEQRES 1 B 340 SER MET GLY VAL ARG LYS LEU ALA THR ILE ARG THR ALA SEQRES 2 B 340 GLY GLU ILE THR PRO ILE ALA GLY ALA GLU ALA ILE GLU SEQRES 3 B 340 CYS CYS HIS VAL ASP GLY TRP THR CYS VAL ILE LYS LYS SEQRES 4 B 340 GLY GLU PHE LYS GLN GLY ASP ARG GLY VAL TYR PHE GLU SEQRES 5 B 340 ILE ASP SER PHE ILE LYS GLU ASP ASN ASP ARG TYR PRO SEQRES 6 B 340 MET LEU SER LYS GLN VAL ILE ASP TYR GLU GLY GLN ARG SEQRES 7 B 340 GLY THR ARG LEU ARG THR ALA ARG LEU ARG GLY GLN LEU SEQRES 8 B 340 SER GLN GLY LEU PHE LEU PRO MET ASP ARG PHE PRO GLU SEQRES 9 B 340 LEU ALA SER ASN GLN VAL GLY ASP ASP VAL THR GLU ILE SEQRES 10 B 340 LEU GLY ILE THR LYS TRP GLU PRO PRO ILE SER THR ASN SEQRES 11 B 340 LEU SER GLY GLU ILE LEU GLY GLU PHE PRO THR PHE ILE SEQRES 12 B 340 SER LYS THR ASP GLN GLU ARG VAL GLN ASN LEU ILE PRO SEQRES 13 B 340 GLN ILE GLU GLU ASN LYS GLY GLN LYS PHE GLU VAL THR SEQRES 14 B 340 VAL LYS LEU ALA GLY SER SER MET THR VAL TYR ARG LYS SEQRES 15 B 340 ASP ASP HIS ILE GLY VAL CYS GLY ARG ASN TRP GLU LEU SEQRES 16 B 340 ARG GLU THR ALA THR ASN ALA GLN TRP HIS ALA ALA ARG SEQRES 17 B 340 ARG ASN LYS MET ILE GLU GLY LEU GLN PHE LEU ASN ARG SEQRES 18 B 340 ASN LEU ALA LEU GLN GLY GLU ILE ILE GLY GLU SER ILE SEQRES 19 B 340 GLN GLY ASN LEU GLU LYS LEU LYS GLY GLN ASP PHE TYR SEQRES 20 B 340 LEU PHE ASP ILE TYR ASP ILE ASP LYS ALA GLN TYR LEU SEQRES 21 B 340 THR PRO ILE GLU ARG GLN SER LEU VAL LYS GLN LEU ASN SEQRES 22 B 340 ASP ASN GLY PHE THR VAL LYS HIS VAL PRO ILE LEU ASP SEQRES 23 B 340 ASP LEU GLU LEU ASN HIS THR ALA GLU GLN ILE LEU ALA SEQRES 24 B 340 MET ALA ASP GLY PRO SER LEU ASN LYS ASN VAL LYS ARG SEQRES 25 B 340 GLU GLY LEU VAL PHE LYS ARG LEU ASP GLY LYS PHE SER SEQRES 26 B 340 PHE LYS ALA ILE SER ASN ALA TYR LEU GLU LYS HIS LYS SEQRES 27 B 340 ASP ARG SEQRES 1 C 340 SER MET GLY VAL ARG LYS LEU ALA THR ILE ARG THR ALA SEQRES 2 C 340 GLY GLU ILE THR PRO ILE ALA GLY ALA GLU ALA ILE GLU SEQRES 3 C 340 CYS CYS HIS VAL ASP GLY TRP THR CYS VAL ILE LYS LYS SEQRES 4 C 340 GLY GLU PHE LYS GLN GLY ASP ARG GLY VAL TYR PHE GLU SEQRES 5 C 340 ILE ASP SER PHE ILE LYS GLU ASP ASN ASP ARG TYR PRO SEQRES 6 C 340 MET LEU SER LYS GLN VAL ILE ASP TYR GLU GLY GLN ARG SEQRES 7 C 340 GLY THR ARG LEU ARG THR ALA ARG LEU ARG GLY GLN LEU SEQRES 8 C 340 SER GLN GLY LEU PHE LEU PRO MET ASP ARG PHE PRO GLU SEQRES 9 C 340 LEU ALA SER ASN GLN VAL GLY ASP ASP VAL THR GLU ILE SEQRES 10 C 340 LEU GLY ILE THR LYS TRP GLU PRO PRO ILE SER THR ASN SEQRES 11 C 340 LEU SER GLY GLU ILE LEU GLY GLU PHE PRO THR PHE ILE SEQRES 12 C 340 SER LYS THR ASP GLN GLU ARG VAL GLN ASN LEU ILE PRO SEQRES 13 C 340 GLN ILE GLU GLU ASN LYS GLY GLN LYS PHE GLU VAL THR SEQRES 14 C 340 VAL LYS LEU ALA GLY SER SER MET THR VAL TYR ARG LYS SEQRES 15 C 340 ASP ASP HIS ILE GLY VAL CYS GLY ARG ASN TRP GLU LEU SEQRES 16 C 340 ARG GLU THR ALA THR ASN ALA GLN TRP HIS ALA ALA ARG SEQRES 17 C 340 ARG ASN LYS MET ILE GLU GLY LEU GLN PHE LEU ASN ARG SEQRES 18 C 340 ASN LEU ALA LEU GLN GLY GLU ILE ILE GLY GLU SER ILE SEQRES 19 C 340 GLN GLY ASN LEU GLU LYS LEU LYS GLY GLN ASP PHE TYR SEQRES 20 C 340 LEU PHE ASP ILE TYR ASP ILE ASP LYS ALA GLN TYR LEU SEQRES 21 C 340 THR PRO ILE GLU ARG GLN SER LEU VAL LYS GLN LEU ASN SEQRES 22 C 340 ASP ASN GLY PHE THR VAL LYS HIS VAL PRO ILE LEU ASP SEQRES 23 C 340 ASP LEU GLU LEU ASN HIS THR ALA GLU GLN ILE LEU ALA SEQRES 24 C 340 MET ALA ASP GLY PRO SER LEU ASN LYS ASN VAL LYS ARG SEQRES 25 C 340 GLU GLY LEU VAL PHE LYS ARG LEU ASP GLY LYS PHE SER SEQRES 26 C 340 PHE LYS ALA ILE SER ASN ALA TYR LEU GLU LYS HIS LYS SEQRES 27 C 340 ASP ARG SEQRES 1 D 340 SER MET GLY VAL ARG LYS LEU ALA THR ILE ARG THR ALA SEQRES 2 D 340 GLY GLU ILE THR PRO ILE ALA GLY ALA GLU ALA ILE GLU SEQRES 3 D 340 CYS CYS HIS VAL ASP GLY TRP THR CYS VAL ILE LYS LYS SEQRES 4 D 340 GLY GLU PHE LYS GLN GLY ASP ARG GLY VAL TYR PHE GLU SEQRES 5 D 340 ILE ASP SER PHE ILE LYS GLU ASP ASN ASP ARG TYR PRO SEQRES 6 D 340 MET LEU SER LYS GLN VAL ILE ASP TYR GLU GLY GLN ARG SEQRES 7 D 340 GLY THR ARG LEU ARG THR ALA ARG LEU ARG GLY GLN LEU SEQRES 8 D 340 SER GLN GLY LEU PHE LEU PRO MET ASP ARG PHE PRO GLU SEQRES 9 D 340 LEU ALA SER ASN GLN VAL GLY ASP ASP VAL THR GLU ILE SEQRES 10 D 340 LEU GLY ILE THR LYS TRP GLU PRO PRO ILE SER THR ASN SEQRES 11 D 340 LEU SER GLY GLU ILE LEU GLY GLU PHE PRO THR PHE ILE SEQRES 12 D 340 SER LYS THR ASP GLN GLU ARG VAL GLN ASN LEU ILE PRO SEQRES 13 D 340 GLN ILE GLU GLU ASN LYS GLY GLN LYS PHE GLU VAL THR SEQRES 14 D 340 VAL LYS LEU ALA GLY SER SER MET THR VAL TYR ARG LYS SEQRES 15 D 340 ASP ASP HIS ILE GLY VAL CYS GLY ARG ASN TRP GLU LEU SEQRES 16 D 340 ARG GLU THR ALA THR ASN ALA GLN TRP HIS ALA ALA ARG SEQRES 17 D 340 ARG ASN LYS MET ILE GLU GLY LEU GLN PHE LEU ASN ARG SEQRES 18 D 340 ASN LEU ALA LEU GLN GLY GLU ILE ILE GLY GLU SER ILE SEQRES 19 D 340 GLN GLY ASN LEU GLU LYS LEU LYS GLY GLN ASP PHE TYR SEQRES 20 D 340 LEU PHE ASP ILE TYR ASP ILE ASP LYS ALA GLN TYR LEU SEQRES 21 D 340 THR PRO ILE GLU ARG GLN SER LEU VAL LYS GLN LEU ASN SEQRES 22 D 340 ASP ASN GLY PHE THR VAL LYS HIS VAL PRO ILE LEU ASP SEQRES 23 D 340 ASP LEU GLU LEU ASN HIS THR ALA GLU GLN ILE LEU ALA SEQRES 24 D 340 MET ALA ASP GLY PRO SER LEU ASN LYS ASN VAL LYS ARG SEQRES 25 D 340 GLU GLY LEU VAL PHE LYS ARG LEU ASP GLY LYS PHE SER SEQRES 26 D 340 PHE LYS ALA ILE SER ASN ALA TYR LEU GLU LYS HIS LYS SEQRES 27 D 340 ASP ARG HET AMP A 401 22 HET AMP B 401 22 HET AMP C 401 22 HET AMP D 401 22 HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 5 AMP 4(C10 H14 N5 O7 P) FORMUL 9 HOH *223(H2 O) HELIX 1 AA1 TYR A 63 LYS A 68 5 6 HELIX 2 AA2 ASP A 99 ALA A 105 5 7 HELIX 3 AA3 SER A 127 SER A 131 5 5 HELIX 4 AA4 ARG A 149 ASN A 152 5 4 HELIX 5 AA5 LEU A 153 ASN A 160 1 8 HELIX 6 AA6 ASN A 200 ASN A 209 1 10 HELIX 7 AA7 LYS A 210 ASN A 219 1 10 HELIX 8 AA8 THR A 260 ASN A 274 1 15 HELIX 9 AA9 THR A 292 ASP A 301 1 10 HELIX 10 AB1 SER A 329 HIS A 336 1 8 HELIX 11 AB2 TYR B 63 VAL B 70 5 8 HELIX 12 AB3 ASP B 99 ALA B 105 5 7 HELIX 13 AB4 ARG B 149 ASN B 152 5 4 HELIX 14 AB5 LEU B 153 ASN B 160 1 8 HELIX 15 AB6 ASN B 200 ASN B 209 1 10 HELIX 16 AB7 LYS B 210 ASN B 219 1 10 HELIX 17 AB8 THR B 260 ASN B 274 1 15 HELIX 18 AB9 THR B 292 ASP B 301 1 10 HELIX 19 AC1 SER B 329 HIS B 336 1 8 HELIX 20 AC2 TYR C 63 VAL C 70 5 8 HELIX 21 AC3 ASP C 99 ALA C 105 5 7 HELIX 22 AC4 ARG C 149 ASN C 152 5 4 HELIX 23 AC5 LEU C 153 ASN C 160 1 8 HELIX 24 AC6 ASN C 200 ASN C 209 1 10 HELIX 25 AC7 LYS C 210 ASN C 219 1 10 HELIX 26 AC8 THR C 260 ASN C 274 1 15 HELIX 27 AC9 THR C 292 ALA C 300 1 9 HELIX 28 AD1 SER C 329 HIS C 336 1 8 HELIX 29 AD2 TYR D 63 LYS D 68 5 6 HELIX 30 AD3 ASP D 99 ALA D 105 5 7 HELIX 31 AD4 LEU D 153 ASN D 160 1 8 HELIX 32 AD5 ASN D 200 ASN D 209 1 10 HELIX 33 AD6 LYS D 210 ASN D 219 1 10 HELIX 34 AD7 THR D 260 ASN D 274 1 15 HELIX 35 AD8 THR D 292 ALA D 300 1 9 HELIX 36 AD9 SER D 329 HIS D 336 1 8 SHEET 1 AA1 3 ALA A 7 THR A 11 0 SHEET 2 AA1 3 ARG A 46 PHE A 50 -1 O TYR A 49 N THR A 8 SHEET 3 AA1 3 LEU A 94 PRO A 97 -1 O LEU A 94 N PHE A 50 SHEET 1 AA2 3 ILE A 15 PRO A 17 0 SHEET 2 AA2 3 ILE A 24 VAL A 29 -1 O CYS A 26 N THR A 16 SHEET 3 AA2 3 TRP A 32 LYS A 37 -1 O CYS A 34 N CYS A 27 SHEET 1 AA3 4 VAL A 70 TYR A 73 0 SHEET 2 AA3 4 GLN A 76 ARG A 80 -1 O GLY A 78 N ILE A 71 SHEET 3 AA3 4 SER A 54 LYS A 57 -1 N ILE A 56 O THR A 79 SHEET 4 AA3 4 THR A 120 LYS A 121 -1 O THR A 120 N PHE A 55 SHEET 1 AA4 2 ALA A 84 LEU A 86 0 SHEET 2 AA4 2 GLN A 89 SER A 91 -1 O SER A 91 N ALA A 84 SHEET 1 AA5 7 ILE A 134 GLU A 137 0 SHEET 2 AA5 7 TRP A 192 LEU A 194 -1 O GLU A 193 N GLY A 136 SHEET 3 AA5 7 HIS A 184 CYS A 188 -1 N VAL A 187 O LEU A 194 SHEET 4 AA5 7 SER A 174 LYS A 181 -1 N THR A 177 O CYS A 188 SHEET 5 AA5 7 LEU A 222 GLY A 230 -1 O LEU A 224 N VAL A 178 SHEET 6 AA5 7 GLN A 243 ASP A 252 -1 O PHE A 248 N GLN A 225 SHEET 7 AA5 7 GLN A 257 TYR A 258 -1 O GLN A 257 N ASP A 252 SHEET 1 AA6 7 ILE A 134 GLU A 137 0 SHEET 2 AA6 7 TRP A 192 LEU A 194 -1 O GLU A 193 N GLY A 136 SHEET 3 AA6 7 HIS A 184 CYS A 188 -1 N VAL A 187 O LEU A 194 SHEET 4 AA6 7 SER A 174 LYS A 181 -1 N THR A 177 O CYS A 188 SHEET 5 AA6 7 LEU A 222 GLY A 230 -1 O LEU A 224 N VAL A 178 SHEET 6 AA6 7 GLN A 243 ASP A 252 -1 O PHE A 248 N GLN A 225 SHEET 7 AA6 7 LYS A 279 HIS A 280 1 O LYS A 279 N LEU A 247 SHEET 1 AA7 4 LEU A 287 GLU A 288 0 SHEET 2 AA7 4 LYS A 164 LYS A 170 -1 N PHE A 165 O LEU A 287 SHEET 3 AA7 4 GLY A 313 ARG A 318 -1 O LYS A 317 N GLU A 166 SHEET 4 AA7 4 SER A 324 ILE A 328 -1 O PHE A 325 N PHE A 316 SHEET 1 AA8 3 ALA B 7 THR B 11 0 SHEET 2 AA8 3 ARG B 46 PHE B 50 -1 O TYR B 49 N THR B 8 SHEET 3 AA8 3 LEU B 94 PRO B 97 -1 O LEU B 94 N PHE B 50 SHEET 1 AA9 3 ILE B 15 ILE B 18 0 SHEET 2 AA9 3 ALA B 21 VAL B 29 -1 O CYS B 26 N THR B 16 SHEET 3 AA9 3 TRP B 32 LYS B 37 -1 O CYS B 34 N CYS B 27 SHEET 1 AB1 4 ILE B 71 TYR B 73 0 SHEET 2 AB1 4 GLN B 76 ARG B 80 -1 O GLY B 78 N ILE B 71 SHEET 3 AB1 4 SER B 54 LYS B 57 -1 N ILE B 56 O THR B 79 SHEET 4 AB1 4 THR B 120 LYS B 121 -1 O THR B 120 N PHE B 55 SHEET 1 AB2 2 ALA B 84 LEU B 86 0 SHEET 2 AB2 2 GLN B 89 SER B 91 -1 O SER B 91 N ALA B 84 SHEET 1 AB3 7 ILE B 134 GLU B 137 0 SHEET 2 AB3 7 TRP B 192 LEU B 194 -1 O GLU B 193 N LEU B 135 SHEET 3 AB3 7 HIS B 184 CYS B 188 -1 N VAL B 187 O LEU B 194 SHEET 4 AB3 7 SER B 174 LYS B 181 -1 N THR B 177 O CYS B 188 SHEET 5 AB3 7 LEU B 222 GLY B 230 -1 O LEU B 224 N VAL B 178 SHEET 6 AB3 7 GLN B 243 ASP B 252 -1 O ASP B 249 N GLN B 225 SHEET 7 AB3 7 GLN B 257 TYR B 258 -1 O GLN B 257 N ASP B 252 SHEET 1 AB4 4 ILE B 283 GLU B 288 0 SHEET 2 AB4 4 LYS B 164 LYS B 170 -1 N VAL B 167 O LEU B 284 SHEET 3 AB4 4 GLY B 313 ARG B 318 -1 O LYS B 317 N GLU B 166 SHEET 4 AB4 4 SER B 324 ILE B 328 -1 O ALA B 327 N LEU B 314 SHEET 1 AB5 5 TRP C 32 LYS C 37 0 SHEET 2 AB5 5 ILE C 24 VAL C 29 -1 N CYS C 27 O CYS C 34 SHEET 3 AB5 5 ALA C 7 PRO C 17 -1 N GLY C 13 O HIS C 28 SHEET 4 AB5 5 ARG C 46 PHE C 50 -1 O TYR C 49 N THR C 8 SHEET 5 AB5 5 LEU C 94 PRO C 97 -1 O LEU C 94 N PHE C 50 SHEET 1 AB6 4 ILE C 71 TYR C 73 0 SHEET 2 AB6 4 GLN C 76 ARG C 80 -1 O GLY C 78 N ILE C 71 SHEET 3 AB6 4 SER C 54 LYS C 57 -1 N ILE C 56 O THR C 79 SHEET 4 AB6 4 THR C 120 LYS C 121 -1 O THR C 120 N PHE C 55 SHEET 1 AB7 2 ALA C 84 LEU C 86 0 SHEET 2 AB7 2 GLN C 89 SER C 91 -1 O SER C 91 N ALA C 84 SHEET 1 AB8 7 ILE C 134 GLU C 137 0 SHEET 2 AB8 7 TRP C 192 LEU C 194 -1 O GLU C 193 N LEU C 135 SHEET 3 AB8 7 HIS C 184 CYS C 188 -1 N VAL C 187 O LEU C 194 SHEET 4 AB8 7 SER C 174 LYS C 181 -1 N LYS C 181 O HIS C 184 SHEET 5 AB8 7 LEU C 222 GLY C 230 -1 O LEU C 224 N VAL C 178 SHEET 6 AB8 7 GLN C 243 ASP C 252 -1 O TYR C 251 N ALA C 223 SHEET 7 AB8 7 GLN C 257 TYR C 258 -1 O GLN C 257 N ASP C 252 SHEET 1 AB9 7 ILE C 134 GLU C 137 0 SHEET 2 AB9 7 TRP C 192 LEU C 194 -1 O GLU C 193 N LEU C 135 SHEET 3 AB9 7 HIS C 184 CYS C 188 -1 N VAL C 187 O LEU C 194 SHEET 4 AB9 7 SER C 174 LYS C 181 -1 N LYS C 181 O HIS C 184 SHEET 5 AB9 7 LEU C 222 GLY C 230 -1 O LEU C 224 N VAL C 178 SHEET 6 AB9 7 GLN C 243 ASP C 252 -1 O TYR C 251 N ALA C 223 SHEET 7 AB9 7 LYS C 279 HIS C 280 1 O LYS C 279 N LEU C 247 SHEET 1 AC1 4 ILE C 283 GLU C 288 0 SHEET 2 AC1 4 LYS C 164 LYS C 170 -1 N VAL C 167 O LEU C 284 SHEET 3 AC1 4 GLY C 313 ARG C 318 -1 O LYS C 317 N GLU C 166 SHEET 4 AC1 4 SER C 324 ILE C 328 -1 O PHE C 325 N PHE C 316 SHEET 1 AC2 3 ALA D 7 THR D 11 0 SHEET 2 AC2 3 ARG D 46 PHE D 50 -1 O TYR D 49 N THR D 8 SHEET 3 AC2 3 LEU D 94 PRO D 97 -1 O LEU D 94 N PHE D 50 SHEET 1 AC3 3 ILE D 15 PRO D 17 0 SHEET 2 AC3 3 ILE D 24 VAL D 29 -1 O CYS D 26 N THR D 16 SHEET 3 AC3 3 TRP D 32 LYS D 37 -1 O CYS D 34 N CYS D 27 SHEET 1 AC4 4 VAL D 70 TYR D 73 0 SHEET 2 AC4 4 GLN D 76 ARG D 80 -1 O GLY D 78 N ILE D 71 SHEET 3 AC4 4 SER D 54 LYS D 57 -1 N ILE D 56 O THR D 79 SHEET 4 AC4 4 THR D 120 LYS D 121 -1 O THR D 120 N PHE D 55 SHEET 1 AC5 2 ALA D 84 LEU D 86 0 SHEET 2 AC5 2 GLN D 89 SER D 91 -1 O SER D 91 N ALA D 84 SHEET 1 AC6 7 ILE D 134 GLU D 137 0 SHEET 2 AC6 7 TRP D 192 LEU D 194 -1 O GLU D 193 N GLY D 136 SHEET 3 AC6 7 HIS D 184 CYS D 188 -1 N VAL D 187 O LEU D 194 SHEET 4 AC6 7 SER D 174 LYS D 181 -1 N THR D 177 O CYS D 188 SHEET 5 AC6 7 LEU D 222 GLY D 230 -1 O LEU D 224 N VAL D 178 SHEET 6 AC6 7 GLN D 243 ASP D 252 -1 O PHE D 248 N GLN D 225 SHEET 7 AC6 7 GLN D 257 TYR D 258 -1 O GLN D 257 N ASP D 252 SHEET 1 AC7 7 ILE D 134 GLU D 137 0 SHEET 2 AC7 7 TRP D 192 LEU D 194 -1 O GLU D 193 N GLY D 136 SHEET 3 AC7 7 HIS D 184 CYS D 188 -1 N VAL D 187 O LEU D 194 SHEET 4 AC7 7 SER D 174 LYS D 181 -1 N THR D 177 O CYS D 188 SHEET 5 AC7 7 LEU D 222 GLY D 230 -1 O LEU D 224 N VAL D 178 SHEET 6 AC7 7 GLN D 243 ASP D 252 -1 O PHE D 248 N GLN D 225 SHEET 7 AC7 7 LYS D 279 HIS D 280 1 O LYS D 279 N LEU D 247 SHEET 1 AC8 5 GLU D 148 ARG D 149 0 SHEET 2 AC8 5 SER D 324 ILE D 328 1 O LYS D 326 N GLU D 148 SHEET 3 AC8 5 GLY D 313 ARG D 318 -1 N LEU D 314 O ALA D 327 SHEET 4 AC8 5 LYS D 164 LYS D 170 -1 N GLU D 166 O LYS D 317 SHEET 5 AC8 5 LEU D 287 GLU D 288 -1 O LEU D 287 N PHE D 165 LINK NZ LYS A 170 P AMP A 401 1555 1555 1.65 LINK NZ LYS B 170 P AMP B 401 1555 1555 1.66 LINK NZ LYS C 170 P AMP C 401 1555 1555 1.66 LINK NZ LYS D 170 P AMP D 401 1555 1555 1.66 SITE 1 AC1 14 THR A 145 THR A 168 VAL A 169 LYS A 170 SITE 2 AC1 14 LEU A 171 SER A 175 ARG A 190 GLU A 227 SITE 3 AC1 14 PHE A 248 VAL A 281 GLU A 312 VAL A 315 SITE 4 AC1 14 LYS A 317 LYS A 326 SITE 1 AC2 14 THR B 145 THR B 168 VAL B 169 LEU B 171 SITE 2 AC2 14 SER B 175 GLU B 227 PHE B 248 VAL B 281 SITE 3 AC2 14 GLU B 312 GLY B 313 VAL B 315 LYS B 317 SITE 4 AC2 14 LYS B 326 HOH B 526 SITE 1 AC3 15 THR C 145 THR C 168 VAL C 169 LEU C 171 SITE 2 AC3 15 SER C 175 GLU C 227 PHE C 248 VAL C 281 SITE 3 AC3 15 GLU C 312 GLY C 313 VAL C 315 LYS C 317 SITE 4 AC3 15 LYS C 326 HOH C 518 HOH C 521 SITE 1 AC4 16 THR D 145 THR D 168 VAL D 169 LEU D 171 SITE 2 AC4 16 SER D 175 ARG D 190 GLU D 227 PHE D 248 SITE 3 AC4 16 VAL D 281 GLU D 312 GLY D 313 VAL D 315 SITE 4 AC4 16 LYS D 317 LYS D 326 HOH D 520 HOH D 543 CRYST1 125.271 104.183 120.556 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007983 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009598 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008295 0.00000