data_6VTX # _entry.id 6VTX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6VTX pdb_00006vtx 10.2210/pdb6vtx/pdb WWPDB D_1000247037 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VTX _pdbx_database_status.recvd_initial_deposition_date 2020-02-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sharma, R.' 1 ? 'Sharma, S.' 2 ? 'Choi, K.J.' 3 ? 'Ferreon, A.C.M.' 4 ? 'Ferreon, J.C.' 5 ? 'Sankaran, B.' 6 ? 'MacKenzie, K.R.' 7 ? 'Kim, C.' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 5579 _citation.page_last 5579 _citation.title 'Liquid condensation of reprogramming factor KLF4 with DNA provides a mechanism for chromatin organization.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-25761-7 _citation.pdbx_database_id_PubMed 34552088 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sharma, R.' 1 ? primary 'Choi, K.J.' 2 ? primary 'Quan, M.D.' 3 ? primary 'Sharma, S.' 4 ? primary 'Sankaran, B.' 5 0000-0002-3266-8131 primary 'Park, H.' 6 ? primary 'LaGrone, A.' 7 ? primary 'Kim, J.J.' 8 0000-0003-4709-262X primary 'MacKenzie, K.R.' 9 ? primary 'Ferreon, A.C.M.' 10 0000-0002-8538-1732 primary 'Kim, C.' 11 0000-0002-3152-0020 primary 'Ferreon, J.C.' 12 0000-0002-3175-5700 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 113.502 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6VTX _cell.details ? _cell.formula_units_Z ? _cell.length_a 38.964 _cell.length_a_esd ? _cell.length_b 46.688 _cell.length_b_esd ? _cell.length_c 45.200 _cell.length_c_esd ? _cell.volume 75404.396 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VTX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Krueppel-like factor 4' 9998.326 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*GP*GP*GP*GP*TP*GP*TP*GP*CP*C)-3') ; 3759.439 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*GP*CP*AP*CP*AP*CP*CP*CP*CP*CP*T)-3') ; 3568.333 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 5 non-polymer nat 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 81 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Epithelial zinc finger protein EZF,Gut-enriched krueppel-like factor' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM KRHF ; ;HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM KRHF ; A ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DG)(DG)(DG)(DG)(DT)(DG)(DT)(DG)(DC)(DC)' AGGGGGTGTGCC B ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DC)(DA)(DC)(DA)(DC)(DC)(DC)(DC)(DC)(DT)' GGCACACCCCCT C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 THR n 1 3 CYS n 1 4 ASP n 1 5 TYR n 1 6 ALA n 1 7 GLY n 1 8 CYS n 1 9 GLY n 1 10 LYS n 1 11 THR n 1 12 TYR n 1 13 THR n 1 14 LYS n 1 15 SER n 1 16 SER n 1 17 HIS n 1 18 LEU n 1 19 LYS n 1 20 ALA n 1 21 HIS n 1 22 LEU n 1 23 ARG n 1 24 THR n 1 25 HIS n 1 26 THR n 1 27 GLY n 1 28 GLU n 1 29 LYS n 1 30 PRO n 1 31 TYR n 1 32 HIS n 1 33 CYS n 1 34 ASP n 1 35 TRP n 1 36 ASP n 1 37 GLY n 1 38 CYS n 1 39 GLY n 1 40 TRP n 1 41 LYS n 1 42 PHE n 1 43 ALA n 1 44 ARG n 1 45 SER n 1 46 ASP n 1 47 GLU n 1 48 LEU n 1 49 THR n 1 50 ARG n 1 51 HIS n 1 52 TYR n 1 53 ARG n 1 54 LYS n 1 55 HIS n 1 56 THR n 1 57 GLY n 1 58 HIS n 1 59 ARG n 1 60 PRO n 1 61 PHE n 1 62 GLN n 1 63 CYS n 1 64 GLN n 1 65 LYS n 1 66 CYS n 1 67 ASP n 1 68 ARG n 1 69 ALA n 1 70 PHE n 1 71 SER n 1 72 ARG n 1 73 SER n 1 74 ASP n 1 75 HIS n 1 76 LEU n 1 77 ALA n 1 78 LEU n 1 79 HIS n 1 80 MET n 1 81 LYS n 1 82 ARG n 1 83 HIS n 1 84 PHE n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DG n 2 5 DG n 2 6 DG n 2 7 DT n 2 8 DG n 2 9 DT n 2 10 DG n 2 11 DC n 2 12 DC n 3 1 DG n 3 2 DG n 3 3 DC n 3 4 DA n 3 5 DC n 3 6 DA n 3 7 DC n 3 8 DC n 3 9 DC n 3 10 DC n 3 11 DC n 3 12 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 84 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'KLF4, EZF, GKLF' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 12 'Homo sapiens' ? 9606 ? 3 1 sample 1 12 'Homo sapiens' ? 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP KLF4_HUMAN O43474 O43474-1 1 ;HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM KRHF ; 396 2 PDB 6VTX 6VTX ? 2 ? 1 3 PDB 6VTX 6VTX ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6VTX A 1 ? 84 ? O43474 396 ? 479 ? 430 513 2 2 6VTX B 1 ? 12 ? 6VTX 1 ? 12 ? 1 12 3 3 6VTX C 1 ? 12 ? 6VTX 1 ? 12 ? 1 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VTX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Sodium iodide (pH 7.0) and 20% w/v polyethylene glycol 3,350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 77 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-10-23 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 34.56 _reflns.entry_id 6VTX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.14 _reflns.d_resolution_low 41.45 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8237 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.14 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.31 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.975 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.14 _reflns_shell.d_res_low 2.21 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 816 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.304 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 49.92 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VTX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.14 _refine.ls_d_res_low 41.45 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8016 _refine.ls_number_reflns_R_free 399 _refine.ls_number_reflns_R_work 7617 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.14 _refine.ls_percent_reflns_R_free 4.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2184 _refine.ls_R_factor_R_free 0.2472 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2170 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2WBU _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.5247 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2702 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.14 _refine_hist.d_res_low 41.45 _refine_hist.number_atoms_solvent 81 _refine_hist.number_atoms_total 1227 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 656 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0028 ? 1223 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.4034 ? 1753 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0239 ? 183 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0016 ? 142 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 25.6083 ? 324 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.14 2.45 . . 150 2365 91.29 . . . 0.3410 . 0.3147 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.45 3.09 . . 132 2603 98.88 . . . 0.2878 . 0.2684 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.09 41.45 . . 117 2649 98.19 . . . 0.2043 . 0.1776 . . . . . . . . . . . # _struct.entry_id 6VTX _struct.title 'Crystal structure of human KLF4 zinc finger DNA binding domain in complex with NANOG DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VTX _struct_keywords.text 'KLF4, Zinc Finger, DNA binding domain, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 14 ? GLY A 27 ? LYS A 443 GLY A 456 1 ? 14 HELX_P HELX_P2 AA2 ARG A 44 ? GLY A 57 ? ARG A 473 GLY A 486 1 ? 14 HELX_P HELX_P3 AA3 ARG A 72 ? ARG A 82 ? ARG A 501 ARG A 511 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 3 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 432 A ZN 603 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc2 metalc ? ? A CYS 8 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 437 A ZN 603 1_555 ? ? ? ? ? ? ? 2.440 ? ? metalc3 metalc ? ? A SER 15 OG ? ? ? 1_555 G NA . NA ? ? A SER 444 A NA 604 1_555 ? ? ? ? ? ? ? 2.801 ? ? metalc4 metalc ? ? A HIS 21 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 450 A ZN 603 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc5 metalc ? ? A HIS 25 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 454 A ZN 603 1_555 ? ? ? ? ? ? ? 2.132 ? ? metalc6 metalc ? ? A CYS 33 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 462 A ZN 601 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc7 metalc ? ? A CYS 38 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 467 A ZN 601 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc8 metalc ? ? A HIS 51 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 480 A ZN 601 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc9 metalc ? ? A HIS 55 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 484 A ZN 601 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc10 metalc ? ? A CYS 63 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 492 A ZN 602 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc11 metalc ? ? A CYS 66 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 495 A ZN 602 1_555 ? ? ? ? ? ? ? 2.443 ? ? metalc12 metalc ? ? A HIS 79 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 508 A ZN 602 1_555 ? ? ? ? ? ? ? 2.106 ? ? metalc13 metalc ? ? A HIS 83 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 512 A ZN 602 1_555 ? ? ? ? ? ? ? 2.318 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 12 N3 ? ? B DA 1 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 12 O4 ? ? B DA 1 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 11 N3 ? ? B DG 2 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 11 O2 ? ? B DG 2 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 11 N4 ? ? B DG 2 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 10 N3 ? ? B DG 3 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 10 O2 ? ? B DG 3 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 10 N4 ? ? B DG 3 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 4 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 4 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 4 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 8 N3 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 8 O2 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 8 N4 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 7 N3 ? ? B DG 6 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 7 O2 ? ? B DG 6 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 7 N4 ? ? B DG 6 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 7 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 7 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 9 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 9 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 10 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 10 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 10 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 10 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 10 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 10 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 31 ? HIS A 32 ? TYR A 460 HIS A 461 AA1 2 LYS A 41 ? PHE A 42 ? LYS A 470 PHE A 471 AA2 1 PHE A 61 ? GLN A 62 ? PHE A 490 GLN A 491 AA2 2 ALA A 69 ? PHE A 70 ? ALA A 498 PHE A 499 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 31 ? N TYR A 460 O PHE A 42 ? O PHE A 471 AA2 1 2 N PHE A 61 ? N PHE A 490 O PHE A 70 ? O PHE A 499 # _atom_sites.entry_id 6VTX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.025665 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.011160 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021419 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024125 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NA O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 430 430 HIS HIS A . n A 1 2 THR 2 431 431 THR THR A . n A 1 3 CYS 3 432 432 CYS CYS A . n A 1 4 ASP 4 433 433 ASP ASP A . n A 1 5 TYR 5 434 434 TYR TYR A . n A 1 6 ALA 6 435 435 ALA ALA A . n A 1 7 GLY 7 436 436 GLY GLY A . n A 1 8 CYS 8 437 437 CYS CYS A . n A 1 9 GLY 9 438 438 GLY GLY A . n A 1 10 LYS 10 439 439 LYS LYS A . n A 1 11 THR 11 440 440 THR THR A . n A 1 12 TYR 12 441 441 TYR TYR A . n A 1 13 THR 13 442 442 THR THR A . n A 1 14 LYS 14 443 443 LYS ALA A . n A 1 15 SER 15 444 444 SER SER A . n A 1 16 SER 16 445 445 SER SER A . n A 1 17 HIS 17 446 446 HIS HIS A . n A 1 18 LEU 18 447 447 LEU LEU A . n A 1 19 LYS 19 448 448 LYS LYS A . n A 1 20 ALA 20 449 449 ALA ALA A . n A 1 21 HIS 21 450 450 HIS HIS A . n A 1 22 LEU 22 451 451 LEU LEU A . n A 1 23 ARG 23 452 452 ARG ARG A . n A 1 24 THR 24 453 453 THR THR A . n A 1 25 HIS 25 454 454 HIS HIS A . n A 1 26 THR 26 455 455 THR THR A . n A 1 27 GLY 27 456 456 GLY GLY A . n A 1 28 GLU 28 457 457 GLU ALA A . n A 1 29 LYS 29 458 458 LYS LYS A . n A 1 30 PRO 30 459 459 PRO PRO A . n A 1 31 TYR 31 460 460 TYR TYR A . n A 1 32 HIS 32 461 461 HIS HIS A . n A 1 33 CYS 33 462 462 CYS CYS A . n A 1 34 ASP 34 463 463 ASP ASP A . n A 1 35 TRP 35 464 464 TRP TRP A . n A 1 36 ASP 36 465 465 ASP ASP A . n A 1 37 GLY 37 466 466 GLY GLY A . n A 1 38 CYS 38 467 467 CYS CYS A . n A 1 39 GLY 39 468 468 GLY GLY A . n A 1 40 TRP 40 469 469 TRP TRP A . n A 1 41 LYS 41 470 470 LYS LYS A . n A 1 42 PHE 42 471 471 PHE PHE A . n A 1 43 ALA 43 472 472 ALA ALA A . n A 1 44 ARG 44 473 473 ARG ARG A . n A 1 45 SER 45 474 474 SER SER A . n A 1 46 ASP 46 475 475 ASP ASP A . n A 1 47 GLU 47 476 476 GLU GLU A . n A 1 48 LEU 48 477 477 LEU LEU A . n A 1 49 THR 49 478 478 THR THR A . n A 1 50 ARG 50 479 479 ARG ARG A . n A 1 51 HIS 51 480 480 HIS HIS A . n A 1 52 TYR 52 481 481 TYR TYR A . n A 1 53 ARG 53 482 482 ARG ARG A . n A 1 54 LYS 54 483 483 LYS ALA A . n A 1 55 HIS 55 484 484 HIS HIS A . n A 1 56 THR 56 485 485 THR THR A . n A 1 57 GLY 57 486 486 GLY GLY A . n A 1 58 HIS 58 487 487 HIS HIS A . n A 1 59 ARG 59 488 488 ARG ARG A . n A 1 60 PRO 60 489 489 PRO PRO A . n A 1 61 PHE 61 490 490 PHE PHE A . n A 1 62 GLN 62 491 491 GLN GLN A . n A 1 63 CYS 63 492 492 CYS CYS A . n A 1 64 GLN 64 493 493 GLN GLN A . n A 1 65 LYS 65 494 494 LYS ALA A . n A 1 66 CYS 66 495 495 CYS CYS A . n A 1 67 ASP 67 496 496 ASP ALA A . n A 1 68 ARG 68 497 497 ARG ALA A . n A 1 69 ALA 69 498 498 ALA ALA A . n A 1 70 PHE 70 499 499 PHE PHE A . n A 1 71 SER 71 500 500 SER SER A . n A 1 72 ARG 72 501 501 ARG ARG A . n A 1 73 SER 73 502 502 SER SER A . n A 1 74 ASP 74 503 503 ASP ASP A . n A 1 75 HIS 75 504 504 HIS HIS A . n A 1 76 LEU 76 505 505 LEU LEU A . n A 1 77 ALA 77 506 506 ALA ALA A . n A 1 78 LEU 78 507 507 LEU LEU A . n A 1 79 HIS 79 508 508 HIS HIS A . n A 1 80 MET 80 509 509 MET MET A . n A 1 81 LYS 81 510 510 LYS LYS A . n A 1 82 ARG 82 511 511 ARG ALA A . n A 1 83 HIS 83 512 512 HIS HIS A . n A 1 84 PHE 84 513 ? ? ? A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DG 6 6 6 DG DG B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DT 9 9 9 DT DT B . n B 2 10 DG 10 10 10 DG DG B . n B 2 11 DC 11 11 11 DC DC B . n B 2 12 DC 12 12 12 DC DC B . n C 3 1 DG 1 1 1 DG DG C . n C 3 2 DG 2 2 2 DG DG C . n C 3 3 DC 3 3 3 DC DC C . n C 3 4 DA 4 4 4 DA DA C . n C 3 5 DC 5 5 5 DC DC C . n C 3 6 DA 6 6 6 DA DA C . n C 3 7 DC 7 7 7 DC DC C . n C 3 8 DC 8 8 8 DC DC C . n C 3 9 DC 9 9 9 DC DC C . n C 3 10 DC 10 10 10 DC DC C . n C 3 11 DC 11 11 11 DC DC C . n C 3 12 DT 12 12 12 DT DT C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 601 1484 ZN ZN A . E 4 ZN 1 602 1485 ZN ZN A . F 4 ZN 1 603 1486 ZN ZN A . G 5 NA 1 604 1 NA NA A . H 6 HOH 1 701 31 HOH HOH A . H 6 HOH 2 702 64 HOH HOH A . H 6 HOH 3 703 14 HOH HOH A . H 6 HOH 4 704 25 HOH HOH A . H 6 HOH 5 705 7 HOH HOH A . H 6 HOH 6 706 28 HOH HOH A . H 6 HOH 7 707 59 HOH HOH A . H 6 HOH 8 708 60 HOH HOH A . H 6 HOH 9 709 63 HOH HOH A . H 6 HOH 10 710 57 HOH HOH A . H 6 HOH 11 711 39 HOH HOH A . H 6 HOH 12 712 40 HOH HOH A . H 6 HOH 13 713 29 HOH HOH A . H 6 HOH 14 714 10 HOH HOH A . H 6 HOH 15 715 37 HOH HOH A . H 6 HOH 16 716 20 HOH HOH A . H 6 HOH 17 717 2 HOH HOH A . H 6 HOH 18 718 26 HOH HOH A . H 6 HOH 19 719 1 HOH HOH A . H 6 HOH 20 720 76 HOH HOH A . H 6 HOH 21 721 62 HOH HOH A . H 6 HOH 22 722 12 HOH HOH A . H 6 HOH 23 723 71 HOH HOH A . H 6 HOH 24 724 9 HOH HOH A . H 6 HOH 25 725 68 HOH HOH A . H 6 HOH 26 726 3 HOH HOH A . H 6 HOH 27 727 51 HOH HOH A . H 6 HOH 28 728 66 HOH HOH A . H 6 HOH 29 729 77 HOH HOH A . H 6 HOH 30 730 61 HOH HOH A . H 6 HOH 31 731 52 HOH HOH A . H 6 HOH 32 732 65 HOH HOH A . H 6 HOH 33 733 81 HOH HOH A . H 6 HOH 34 734 80 HOH HOH A . H 6 HOH 35 735 67 HOH HOH A . H 6 HOH 36 736 41 HOH HOH A . H 6 HOH 37 737 19 HOH HOH A . H 6 HOH 38 738 17 HOH HOH A . H 6 HOH 39 739 79 HOH HOH A . H 6 HOH 40 740 49 HOH HOH A . H 6 HOH 41 741 58 HOH HOH A . H 6 HOH 42 742 56 HOH HOH A . H 6 HOH 43 743 45 HOH HOH A . H 6 HOH 44 744 21 HOH HOH A . I 6 HOH 1 101 55 HOH HOH B . I 6 HOH 2 102 78 HOH HOH B . I 6 HOH 3 103 11 HOH HOH B . I 6 HOH 4 104 54 HOH HOH B . I 6 HOH 5 105 6 HOH HOH B . I 6 HOH 6 106 15 HOH HOH B . I 6 HOH 7 107 36 HOH HOH B . I 6 HOH 8 108 73 HOH HOH B . I 6 HOH 9 109 30 HOH HOH B . I 6 HOH 10 110 24 HOH HOH B . I 6 HOH 11 111 43 HOH HOH B . I 6 HOH 12 112 33 HOH HOH B . I 6 HOH 13 113 48 HOH HOH B . I 6 HOH 14 114 70 HOH HOH B . I 6 HOH 15 115 74 HOH HOH B . I 6 HOH 16 116 50 HOH HOH B . I 6 HOH 17 117 18 HOH HOH B . J 6 HOH 1 101 35 HOH HOH C . J 6 HOH 2 102 82 HOH HOH C . J 6 HOH 3 103 32 HOH HOH C . J 6 HOH 4 104 27 HOH HOH C . J 6 HOH 5 105 5 HOH HOH C . J 6 HOH 6 106 46 HOH HOH C . J 6 HOH 7 107 4 HOH HOH C . J 6 HOH 8 108 13 HOH HOH C . J 6 HOH 9 109 23 HOH HOH C . J 6 HOH 10 110 8 HOH HOH C . J 6 HOH 11 111 75 HOH HOH C . J 6 HOH 12 112 72 HOH HOH C . J 6 HOH 13 113 22 HOH HOH C . J 6 HOH 14 114 53 HOH HOH C . J 6 HOH 15 115 42 HOH HOH C . J 6 HOH 16 116 38 HOH HOH C . J 6 HOH 17 117 16 HOH HOH C . J 6 HOH 18 118 47 HOH HOH C . J 6 HOH 19 119 44 HOH HOH C . J 6 HOH 20 120 34 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3610 ? 1 MORE -37 ? 1 'SSA (A^2)' 8490 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 3 ? A CYS 432 ? 1_555 ZN ? F ZN . ? A ZN 603 ? 1_555 SG ? A CYS 8 ? A CYS 437 ? 1_555 105.4 ? 2 SG ? A CYS 3 ? A CYS 432 ? 1_555 ZN ? F ZN . ? A ZN 603 ? 1_555 NE2 ? A HIS 21 ? A HIS 450 ? 1_555 117.4 ? 3 SG ? A CYS 8 ? A CYS 437 ? 1_555 ZN ? F ZN . ? A ZN 603 ? 1_555 NE2 ? A HIS 21 ? A HIS 450 ? 1_555 108.8 ? 4 SG ? A CYS 3 ? A CYS 432 ? 1_555 ZN ? F ZN . ? A ZN 603 ? 1_555 NE2 ? A HIS 25 ? A HIS 454 ? 1_555 108.4 ? 5 SG ? A CYS 8 ? A CYS 437 ? 1_555 ZN ? F ZN . ? A ZN 603 ? 1_555 NE2 ? A HIS 25 ? A HIS 454 ? 1_555 124.7 ? 6 NE2 ? A HIS 21 ? A HIS 450 ? 1_555 ZN ? F ZN . ? A ZN 603 ? 1_555 NE2 ? A HIS 25 ? A HIS 454 ? 1_555 92.7 ? 7 SG ? A CYS 33 ? A CYS 462 ? 1_555 ZN ? D ZN . ? A ZN 601 ? 1_555 SG ? A CYS 38 ? A CYS 467 ? 1_555 118.4 ? 8 SG ? A CYS 33 ? A CYS 462 ? 1_555 ZN ? D ZN . ? A ZN 601 ? 1_555 NE2 ? A HIS 51 ? A HIS 480 ? 1_555 110.4 ? 9 SG ? A CYS 38 ? A CYS 467 ? 1_555 ZN ? D ZN . ? A ZN 601 ? 1_555 NE2 ? A HIS 51 ? A HIS 480 ? 1_555 107.1 ? 10 SG ? A CYS 33 ? A CYS 462 ? 1_555 ZN ? D ZN . ? A ZN 601 ? 1_555 NE2 ? A HIS 55 ? A HIS 484 ? 1_555 111.9 ? 11 SG ? A CYS 38 ? A CYS 467 ? 1_555 ZN ? D ZN . ? A ZN 601 ? 1_555 NE2 ? A HIS 55 ? A HIS 484 ? 1_555 105.2 ? 12 NE2 ? A HIS 51 ? A HIS 480 ? 1_555 ZN ? D ZN . ? A ZN 601 ? 1_555 NE2 ? A HIS 55 ? A HIS 484 ? 1_555 102.5 ? 13 SG ? A CYS 63 ? A CYS 492 ? 1_555 ZN ? E ZN . ? A ZN 602 ? 1_555 SG ? A CYS 66 ? A CYS 495 ? 1_555 95.3 ? 14 SG ? A CYS 63 ? A CYS 492 ? 1_555 ZN ? E ZN . ? A ZN 602 ? 1_555 NE2 ? A HIS 79 ? A HIS 508 ? 1_555 108.0 ? 15 SG ? A CYS 66 ? A CYS 495 ? 1_555 ZN ? E ZN . ? A ZN 602 ? 1_555 NE2 ? A HIS 79 ? A HIS 508 ? 1_555 104.9 ? 16 SG ? A CYS 63 ? A CYS 492 ? 1_555 ZN ? E ZN . ? A ZN 602 ? 1_555 NE2 ? A HIS 83 ? A HIS 512 ? 1_555 113.1 ? 17 SG ? A CYS 66 ? A CYS 495 ? 1_555 ZN ? E ZN . ? A ZN 602 ? 1_555 NE2 ? A HIS 83 ? A HIS 512 ? 1_555 119.7 ? 18 NE2 ? A HIS 79 ? A HIS 508 ? 1_555 ZN ? E ZN . ? A ZN 602 ? 1_555 NE2 ? A HIS 83 ? A HIS 512 ? 1_555 113.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-09-01 2 'Structure model' 1 1 2022-03-16 3 'Structure model' 1 2 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 25.4065158841 5.80341137624 13.2523490596 0.624122927131 ? 0.154370213725 ? 0.134590248828 ? 0.572784105476 ? 0.0788670341881 ? 0.337641879119 ? 8.61022069778 ? 1.22909205628 ? 2.9728286141 ? 4.64372385504 ? -1.61060916688 ? 4.70280719359 ? -0.45237191905 ? -1.16432055539 ? -0.308159072613 ? 0.419963099493 ? 0.278116785308 ? -0.115532138969 ? 0.167469312864 ? -0.00930140019152 ? -0.0149925383442 ? 2 'X-RAY DIFFRACTION' ? refined 14.6653971198 -1.17967634865 -3.57292864466 0.28401205992 ? -0.041237804106 ? -0.0338026626931 ? 0.263771755061 ? 0.0978713263041 ? 0.261334111899 ? 6.15858620393 ? 1.3430074604 ? 2.73155096114 ? 7.94489675587 ? 3.5445522719 ? 4.52367883918 ? -0.560146041538 ? 0.799627578061 ? 0.245868625392 ? -1.60154051365 ? 0.214379859171 ? 0.0982304843242 ? -1.13691058936 ? 0.537507062376 ? 0.352140452092 ? 3 'X-RAY DIFFRACTION' ? refined 6.47032015894 -15.7373720605 5.90890049353 0.202642648373 ? 0.0138090093039 ? 0.0244704483443 ? 0.25917744047 ? -0.0601986736915 ? 0.224510381128 ? 9.17550590978 ? 4.85351309293 ? -5.42752131257 ? 6.19952042609 ? -4.33662485576 ? 8.35465978214 ? -0.168757386747 ? -0.366500329965 ? -0.355353382882 ? -0.0987115098225 ? -0.100712619699 ? -0.105760093037 ? 0.53880653488 ? -0.115107959206 ? 0.225173868783 ? 4 'X-RAY DIFFRACTION' ? refined 11.3172980503 -7.23470336949 10.9393563382 0.249715263765 ? 0.121702975423 ? 0.0684563358777 ? 0.561898502741 ? -0.0827685461367 ? 0.372793359377 ? 7.68334657704 ? -0.868566925315 ? 2.47234612829 ? 4.15971070115 ? -0.998548455597 ? 3.79369439045 ? -0.860267918411 ? -1.47546489531 ? 0.404116350306 ? 0.0931137941885 ? 0.480762811928 ? -0.271071936479 ? 0.0340812839023 ? 0.0242097593955 ? 0.135825463919 ? 5 'X-RAY DIFFRACTION' ? refined 10.5922790136 -6.63115438298 10.5797576149 0.224451809647 ? 0.0323014684639 ? -0.0230723763935 ? 0.610499377198 ? 0.0137586164047 ? 0.545421700972 ? 9.55894995006 ? 0.658225451289 ? 1.91340609619 ? 3.80438261633 ? -0.535010689091 ? 3.97724063431 ? -0.415564688504 ? -1.12893158739 ? -0.445865990428 ? 0.189984885567 ? 0.201351330273 ? 0.524833177699 ? -0.303184060585 ? -0.269198818846 ? -0.0175211211683 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A 1 A 430 ? A 26 A 455 ? ? ;chain 'A' and (resid 430 through 455 ) ; 2 'X-RAY DIFFRACTION' 2 A 27 A 456 ? A 44 A 473 ? ? ;chain 'A' and (resid 456 through 473 ) ; 3 'X-RAY DIFFRACTION' 3 A 45 A 474 ? A 83 A 512 ? ? ;chain 'A' and (resid 474 through 512 ) ; 4 'X-RAY DIFFRACTION' 4 E ? B 1 ? E ? B 12 ? ? ;chain 'B' and (resid 1 through 12 ) ; 5 'X-RAY DIFFRACTION' 5 F ? C 1 ? F ? C 12 ? ? ;chain 'C' and (resid 1 through 12 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19_4092 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 6VTX _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 433 ? ? -99.18 30.57 2 1 ALA A 435 ? ? 53.38 -137.01 3 1 CYS A 437 ? ? -102.75 -81.89 4 1 CYS A 467 ? ? -83.81 -82.33 5 1 CYS A 495 ? ? -135.22 -145.96 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 743 ? 7.12 . 2 1 O ? A HOH 744 ? 7.30 . 3 1 O ? C HOH 120 ? 5.91 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 443 ? CG ? A LYS 14 CG 2 1 Y 1 A LYS 443 ? CD ? A LYS 14 CD 3 1 Y 1 A LYS 443 ? CE ? A LYS 14 CE 4 1 Y 1 A LYS 443 ? NZ ? A LYS 14 NZ 5 1 Y 1 A GLU 457 ? CG ? A GLU 28 CG 6 1 Y 1 A GLU 457 ? CD ? A GLU 28 CD 7 1 Y 1 A GLU 457 ? OE1 ? A GLU 28 OE1 8 1 Y 1 A GLU 457 ? OE2 ? A GLU 28 OE2 9 1 Y 1 A LYS 483 ? CG ? A LYS 54 CG 10 1 Y 1 A LYS 483 ? CD ? A LYS 54 CD 11 1 Y 1 A LYS 483 ? CE ? A LYS 54 CE 12 1 Y 1 A LYS 483 ? NZ ? A LYS 54 NZ 13 1 Y 1 A LYS 494 ? CG ? A LYS 65 CG 14 1 Y 1 A LYS 494 ? CD ? A LYS 65 CD 15 1 Y 1 A LYS 494 ? CE ? A LYS 65 CE 16 1 Y 1 A LYS 494 ? NZ ? A LYS 65 NZ 17 1 Y 1 A ASP 496 ? CG ? A ASP 67 CG 18 1 Y 1 A ASP 496 ? OD1 ? A ASP 67 OD1 19 1 Y 1 A ASP 496 ? OD2 ? A ASP 67 OD2 20 1 Y 1 A ARG 497 ? CG ? A ARG 68 CG 21 1 Y 1 A ARG 497 ? CD ? A ARG 68 CD 22 1 Y 1 A ARG 497 ? NE ? A ARG 68 NE 23 1 Y 1 A ARG 497 ? CZ ? A ARG 68 CZ 24 1 Y 1 A ARG 497 ? NH1 ? A ARG 68 NH1 25 1 Y 1 A ARG 497 ? NH2 ? A ARG 68 NH2 26 1 Y 1 A LYS 510 ? CE ? A LYS 81 CE 27 1 Y 1 A LYS 510 ? NZ ? A LYS 81 NZ 28 1 Y 1 A ARG 511 ? CG ? A ARG 82 CG 29 1 Y 1 A ARG 511 ? CD ? A ARG 82 CD 30 1 Y 1 A ARG 511 ? NE ? A ARG 82 NE 31 1 Y 1 A ARG 511 ? CZ ? A ARG 82 CZ 32 1 Y 1 A ARG 511 ? NH1 ? A ARG 82 NH1 33 1 Y 1 A ARG 511 ? NH2 ? A ARG 82 NH2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id PHE _pdbx_unobs_or_zero_occ_residues.auth_seq_id 513 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id PHE _pdbx_unobs_or_zero_occ_residues.label_seq_id 84 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 CYS N N N N 57 CYS CA C N R 58 CYS C C N N 59 CYS O O N N 60 CYS CB C N N 61 CYS SG S N N 62 CYS OXT O N N 63 CYS H H N N 64 CYS H2 H N N 65 CYS HA H N N 66 CYS HB2 H N N 67 CYS HB3 H N N 68 CYS HG H N N 69 CYS HXT H N N 70 DA OP3 O N N 71 DA P P N N 72 DA OP1 O N N 73 DA OP2 O N N 74 DA "O5'" O N N 75 DA "C5'" C N N 76 DA "C4'" C N R 77 DA "O4'" O N N 78 DA "C3'" C N S 79 DA "O3'" O N N 80 DA "C2'" C N N 81 DA "C1'" C N R 82 DA N9 N Y N 83 DA C8 C Y N 84 DA N7 N Y N 85 DA C5 C Y N 86 DA C6 C Y N 87 DA N6 N N N 88 DA N1 N Y N 89 DA C2 C Y N 90 DA N3 N Y N 91 DA C4 C Y N 92 DA HOP3 H N N 93 DA HOP2 H N N 94 DA "H5'" H N N 95 DA "H5''" H N N 96 DA "H4'" H N N 97 DA "H3'" H N N 98 DA "HO3'" H N N 99 DA "H2'" H N N 100 DA "H2''" H N N 101 DA "H1'" H N N 102 DA H8 H N N 103 DA H61 H N N 104 DA H62 H N N 105 DA H2 H N N 106 DC OP3 O N N 107 DC P P N N 108 DC OP1 O N N 109 DC OP2 O N N 110 DC "O5'" O N N 111 DC "C5'" C N N 112 DC "C4'" C N R 113 DC "O4'" O N N 114 DC "C3'" C N S 115 DC "O3'" O N N 116 DC "C2'" C N N 117 DC "C1'" C N R 118 DC N1 N N N 119 DC C2 C N N 120 DC O2 O N N 121 DC N3 N N N 122 DC C4 C N N 123 DC N4 N N N 124 DC C5 C N N 125 DC C6 C N N 126 DC HOP3 H N N 127 DC HOP2 H N N 128 DC "H5'" H N N 129 DC "H5''" H N N 130 DC "H4'" H N N 131 DC "H3'" H N N 132 DC "HO3'" H N N 133 DC "H2'" H N N 134 DC "H2''" H N N 135 DC "H1'" H N N 136 DC H41 H N N 137 DC H42 H N N 138 DC H5 H N N 139 DC H6 H N N 140 DG OP3 O N N 141 DG P P N N 142 DG OP1 O N N 143 DG OP2 O N N 144 DG "O5'" O N N 145 DG "C5'" C N N 146 DG "C4'" C N R 147 DG "O4'" O N N 148 DG "C3'" C N S 149 DG "O3'" O N N 150 DG "C2'" C N N 151 DG "C1'" C N R 152 DG N9 N Y N 153 DG C8 C Y N 154 DG N7 N Y N 155 DG C5 C Y N 156 DG C6 C N N 157 DG O6 O N N 158 DG N1 N N N 159 DG C2 C N N 160 DG N2 N N N 161 DG N3 N N N 162 DG C4 C Y N 163 DG HOP3 H N N 164 DG HOP2 H N N 165 DG "H5'" H N N 166 DG "H5''" H N N 167 DG "H4'" H N N 168 DG "H3'" H N N 169 DG "HO3'" H N N 170 DG "H2'" H N N 171 DG "H2''" H N N 172 DG "H1'" H N N 173 DG H8 H N N 174 DG H1 H N N 175 DG H21 H N N 176 DG H22 H N N 177 DT OP3 O N N 178 DT P P N N 179 DT OP1 O N N 180 DT OP2 O N N 181 DT "O5'" O N N 182 DT "C5'" C N N 183 DT "C4'" C N R 184 DT "O4'" O N N 185 DT "C3'" C N S 186 DT "O3'" O N N 187 DT "C2'" C N N 188 DT "C1'" C N R 189 DT N1 N N N 190 DT C2 C N N 191 DT O2 O N N 192 DT N3 N N N 193 DT C4 C N N 194 DT O4 O N N 195 DT C5 C N N 196 DT C7 C N N 197 DT C6 C N N 198 DT HOP3 H N N 199 DT HOP2 H N N 200 DT "H5'" H N N 201 DT "H5''" H N N 202 DT "H4'" H N N 203 DT "H3'" H N N 204 DT "HO3'" H N N 205 DT "H2'" H N N 206 DT "H2''" H N N 207 DT "H1'" H N N 208 DT H3 H N N 209 DT H71 H N N 210 DT H72 H N N 211 DT H73 H N N 212 DT H6 H N N 213 GLN N N N N 214 GLN CA C N S 215 GLN C C N N 216 GLN O O N N 217 GLN CB C N N 218 GLN CG C N N 219 GLN CD C N N 220 GLN OE1 O N N 221 GLN NE2 N N N 222 GLN OXT O N N 223 GLN H H N N 224 GLN H2 H N N 225 GLN HA H N N 226 GLN HB2 H N N 227 GLN HB3 H N N 228 GLN HG2 H N N 229 GLN HG3 H N N 230 GLN HE21 H N N 231 GLN HE22 H N N 232 GLN HXT H N N 233 GLU N N N N 234 GLU CA C N S 235 GLU C C N N 236 GLU O O N N 237 GLU CB C N N 238 GLU CG C N N 239 GLU CD C N N 240 GLU OE1 O N N 241 GLU OE2 O N N 242 GLU OXT O N N 243 GLU H H N N 244 GLU H2 H N N 245 GLU HA H N N 246 GLU HB2 H N N 247 GLU HB3 H N N 248 GLU HG2 H N N 249 GLU HG3 H N N 250 GLU HE2 H N N 251 GLU HXT H N N 252 GLY N N N N 253 GLY CA C N N 254 GLY C C N N 255 GLY O O N N 256 GLY OXT O N N 257 GLY H H N N 258 GLY H2 H N N 259 GLY HA2 H N N 260 GLY HA3 H N N 261 GLY HXT H N N 262 HIS N N N N 263 HIS CA C N S 264 HIS C C N N 265 HIS O O N N 266 HIS CB C N N 267 HIS CG C Y N 268 HIS ND1 N Y N 269 HIS CD2 C Y N 270 HIS CE1 C Y N 271 HIS NE2 N Y N 272 HIS OXT O N N 273 HIS H H N N 274 HIS H2 H N N 275 HIS HA H N N 276 HIS HB2 H N N 277 HIS HB3 H N N 278 HIS HD1 H N N 279 HIS HD2 H N N 280 HIS HE1 H N N 281 HIS HE2 H N N 282 HIS HXT H N N 283 HOH O O N N 284 HOH H1 H N N 285 HOH H2 H N N 286 LEU N N N N 287 LEU CA C N S 288 LEU C C N N 289 LEU O O N N 290 LEU CB C N N 291 LEU CG C N N 292 LEU CD1 C N N 293 LEU CD2 C N N 294 LEU OXT O N N 295 LEU H H N N 296 LEU H2 H N N 297 LEU HA H N N 298 LEU HB2 H N N 299 LEU HB3 H N N 300 LEU HG H N N 301 LEU HD11 H N N 302 LEU HD12 H N N 303 LEU HD13 H N N 304 LEU HD21 H N N 305 LEU HD22 H N N 306 LEU HD23 H N N 307 LEU HXT H N N 308 LYS N N N N 309 LYS CA C N S 310 LYS C C N N 311 LYS O O N N 312 LYS CB C N N 313 LYS CG C N N 314 LYS CD C N N 315 LYS CE C N N 316 LYS NZ N N N 317 LYS OXT O N N 318 LYS H H N N 319 LYS H2 H N N 320 LYS HA H N N 321 LYS HB2 H N N 322 LYS HB3 H N N 323 LYS HG2 H N N 324 LYS HG3 H N N 325 LYS HD2 H N N 326 LYS HD3 H N N 327 LYS HE2 H N N 328 LYS HE3 H N N 329 LYS HZ1 H N N 330 LYS HZ2 H N N 331 LYS HZ3 H N N 332 LYS HXT H N N 333 MET N N N N 334 MET CA C N S 335 MET C C N N 336 MET O O N N 337 MET CB C N N 338 MET CG C N N 339 MET SD S N N 340 MET CE C N N 341 MET OXT O N N 342 MET H H N N 343 MET H2 H N N 344 MET HA H N N 345 MET HB2 H N N 346 MET HB3 H N N 347 MET HG2 H N N 348 MET HG3 H N N 349 MET HE1 H N N 350 MET HE2 H N N 351 MET HE3 H N N 352 MET HXT H N N 353 NA NA NA N N 354 PHE N N N N 355 PHE CA C N S 356 PHE C C N N 357 PHE O O N N 358 PHE CB C N N 359 PHE CG C Y N 360 PHE CD1 C Y N 361 PHE CD2 C Y N 362 PHE CE1 C Y N 363 PHE CE2 C Y N 364 PHE CZ C Y N 365 PHE OXT O N N 366 PHE H H N N 367 PHE H2 H N N 368 PHE HA H N N 369 PHE HB2 H N N 370 PHE HB3 H N N 371 PHE HD1 H N N 372 PHE HD2 H N N 373 PHE HE1 H N N 374 PHE HE2 H N N 375 PHE HZ H N N 376 PHE HXT H N N 377 PRO N N N N 378 PRO CA C N S 379 PRO C C N N 380 PRO O O N N 381 PRO CB C N N 382 PRO CG C N N 383 PRO CD C N N 384 PRO OXT O N N 385 PRO H H N N 386 PRO HA H N N 387 PRO HB2 H N N 388 PRO HB3 H N N 389 PRO HG2 H N N 390 PRO HG3 H N N 391 PRO HD2 H N N 392 PRO HD3 H N N 393 PRO HXT H N N 394 SER N N N N 395 SER CA C N S 396 SER C C N N 397 SER O O N N 398 SER CB C N N 399 SER OG O N N 400 SER OXT O N N 401 SER H H N N 402 SER H2 H N N 403 SER HA H N N 404 SER HB2 H N N 405 SER HB3 H N N 406 SER HG H N N 407 SER HXT H N N 408 THR N N N N 409 THR CA C N S 410 THR C C N N 411 THR O O N N 412 THR CB C N R 413 THR OG1 O N N 414 THR CG2 C N N 415 THR OXT O N N 416 THR H H N N 417 THR H2 H N N 418 THR HA H N N 419 THR HB H N N 420 THR HG1 H N N 421 THR HG21 H N N 422 THR HG22 H N N 423 THR HG23 H N N 424 THR HXT H N N 425 TRP N N N N 426 TRP CA C N S 427 TRP C C N N 428 TRP O O N N 429 TRP CB C N N 430 TRP CG C Y N 431 TRP CD1 C Y N 432 TRP CD2 C Y N 433 TRP NE1 N Y N 434 TRP CE2 C Y N 435 TRP CE3 C Y N 436 TRP CZ2 C Y N 437 TRP CZ3 C Y N 438 TRP CH2 C Y N 439 TRP OXT O N N 440 TRP H H N N 441 TRP H2 H N N 442 TRP HA H N N 443 TRP HB2 H N N 444 TRP HB3 H N N 445 TRP HD1 H N N 446 TRP HE1 H N N 447 TRP HE3 H N N 448 TRP HZ2 H N N 449 TRP HZ3 H N N 450 TRP HH2 H N N 451 TRP HXT H N N 452 TYR N N N N 453 TYR CA C N S 454 TYR C C N N 455 TYR O O N N 456 TYR CB C N N 457 TYR CG C Y N 458 TYR CD1 C Y N 459 TYR CD2 C Y N 460 TYR CE1 C Y N 461 TYR CE2 C Y N 462 TYR CZ C Y N 463 TYR OH O N N 464 TYR OXT O N N 465 TYR H H N N 466 TYR H2 H N N 467 TYR HA H N N 468 TYR HB2 H N N 469 TYR HB3 H N N 470 TYR HD1 H N N 471 TYR HD2 H N N 472 TYR HE1 H N N 473 TYR HE2 H N N 474 TYR HH H N N 475 TYR HXT H N N 476 ZN ZN ZN N N 477 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 CYS N CA sing N N 54 CYS N H sing N N 55 CYS N H2 sing N N 56 CYS CA C sing N N 57 CYS CA CB sing N N 58 CYS CA HA sing N N 59 CYS C O doub N N 60 CYS C OXT sing N N 61 CYS CB SG sing N N 62 CYS CB HB2 sing N N 63 CYS CB HB3 sing N N 64 CYS SG HG sing N N 65 CYS OXT HXT sing N N 66 DA OP3 P sing N N 67 DA OP3 HOP3 sing N N 68 DA P OP1 doub N N 69 DA P OP2 sing N N 70 DA P "O5'" sing N N 71 DA OP2 HOP2 sing N N 72 DA "O5'" "C5'" sing N N 73 DA "C5'" "C4'" sing N N 74 DA "C5'" "H5'" sing N N 75 DA "C5'" "H5''" sing N N 76 DA "C4'" "O4'" sing N N 77 DA "C4'" "C3'" sing N N 78 DA "C4'" "H4'" sing N N 79 DA "O4'" "C1'" sing N N 80 DA "C3'" "O3'" sing N N 81 DA "C3'" "C2'" sing N N 82 DA "C3'" "H3'" sing N N 83 DA "O3'" "HO3'" sing N N 84 DA "C2'" "C1'" sing N N 85 DA "C2'" "H2'" sing N N 86 DA "C2'" "H2''" sing N N 87 DA "C1'" N9 sing N N 88 DA "C1'" "H1'" sing N N 89 DA N9 C8 sing Y N 90 DA N9 C4 sing Y N 91 DA C8 N7 doub Y N 92 DA C8 H8 sing N N 93 DA N7 C5 sing Y N 94 DA C5 C6 sing Y N 95 DA C5 C4 doub Y N 96 DA C6 N6 sing N N 97 DA C6 N1 doub Y N 98 DA N6 H61 sing N N 99 DA N6 H62 sing N N 100 DA N1 C2 sing Y N 101 DA C2 N3 doub Y N 102 DA C2 H2 sing N N 103 DA N3 C4 sing Y N 104 DC OP3 P sing N N 105 DC OP3 HOP3 sing N N 106 DC P OP1 doub N N 107 DC P OP2 sing N N 108 DC P "O5'" sing N N 109 DC OP2 HOP2 sing N N 110 DC "O5'" "C5'" sing N N 111 DC "C5'" "C4'" sing N N 112 DC "C5'" "H5'" sing N N 113 DC "C5'" "H5''" sing N N 114 DC "C4'" "O4'" sing N N 115 DC "C4'" "C3'" sing N N 116 DC "C4'" "H4'" sing N N 117 DC "O4'" "C1'" sing N N 118 DC "C3'" "O3'" sing N N 119 DC "C3'" "C2'" sing N N 120 DC "C3'" "H3'" sing N N 121 DC "O3'" "HO3'" sing N N 122 DC "C2'" "C1'" sing N N 123 DC "C2'" "H2'" sing N N 124 DC "C2'" "H2''" sing N N 125 DC "C1'" N1 sing N N 126 DC "C1'" "H1'" sing N N 127 DC N1 C2 sing N N 128 DC N1 C6 sing N N 129 DC C2 O2 doub N N 130 DC C2 N3 sing N N 131 DC N3 C4 doub N N 132 DC C4 N4 sing N N 133 DC C4 C5 sing N N 134 DC N4 H41 sing N N 135 DC N4 H42 sing N N 136 DC C5 C6 doub N N 137 DC C5 H5 sing N N 138 DC C6 H6 sing N N 139 DG OP3 P sing N N 140 DG OP3 HOP3 sing N N 141 DG P OP1 doub N N 142 DG P OP2 sing N N 143 DG P "O5'" sing N N 144 DG OP2 HOP2 sing N N 145 DG "O5'" "C5'" sing N N 146 DG "C5'" "C4'" sing N N 147 DG "C5'" "H5'" sing N N 148 DG "C5'" "H5''" sing N N 149 DG "C4'" "O4'" sing N N 150 DG "C4'" "C3'" sing N N 151 DG "C4'" "H4'" sing N N 152 DG "O4'" "C1'" sing N N 153 DG "C3'" "O3'" sing N N 154 DG "C3'" "C2'" sing N N 155 DG "C3'" "H3'" sing N N 156 DG "O3'" "HO3'" sing N N 157 DG "C2'" "C1'" sing N N 158 DG "C2'" "H2'" sing N N 159 DG "C2'" "H2''" sing N N 160 DG "C1'" N9 sing N N 161 DG "C1'" "H1'" sing N N 162 DG N9 C8 sing Y N 163 DG N9 C4 sing Y N 164 DG C8 N7 doub Y N 165 DG C8 H8 sing N N 166 DG N7 C5 sing Y N 167 DG C5 C6 sing N N 168 DG C5 C4 doub Y N 169 DG C6 O6 doub N N 170 DG C6 N1 sing N N 171 DG N1 C2 sing N N 172 DG N1 H1 sing N N 173 DG C2 N2 sing N N 174 DG C2 N3 doub N N 175 DG N2 H21 sing N N 176 DG N2 H22 sing N N 177 DG N3 C4 sing N N 178 DT OP3 P sing N N 179 DT OP3 HOP3 sing N N 180 DT P OP1 doub N N 181 DT P OP2 sing N N 182 DT P "O5'" sing N N 183 DT OP2 HOP2 sing N N 184 DT "O5'" "C5'" sing N N 185 DT "C5'" "C4'" sing N N 186 DT "C5'" "H5'" sing N N 187 DT "C5'" "H5''" sing N N 188 DT "C4'" "O4'" sing N N 189 DT "C4'" "C3'" sing N N 190 DT "C4'" "H4'" sing N N 191 DT "O4'" "C1'" sing N N 192 DT "C3'" "O3'" sing N N 193 DT "C3'" "C2'" sing N N 194 DT "C3'" "H3'" sing N N 195 DT "O3'" "HO3'" sing N N 196 DT "C2'" "C1'" sing N N 197 DT "C2'" "H2'" sing N N 198 DT "C2'" "H2''" sing N N 199 DT "C1'" N1 sing N N 200 DT "C1'" "H1'" sing N N 201 DT N1 C2 sing N N 202 DT N1 C6 sing N N 203 DT C2 O2 doub N N 204 DT C2 N3 sing N N 205 DT N3 C4 sing N N 206 DT N3 H3 sing N N 207 DT C4 O4 doub N N 208 DT C4 C5 sing N N 209 DT C5 C7 sing N N 210 DT C5 C6 doub N N 211 DT C7 H71 sing N N 212 DT C7 H72 sing N N 213 DT C7 H73 sing N N 214 DT C6 H6 sing N N 215 GLN N CA sing N N 216 GLN N H sing N N 217 GLN N H2 sing N N 218 GLN CA C sing N N 219 GLN CA CB sing N N 220 GLN CA HA sing N N 221 GLN C O doub N N 222 GLN C OXT sing N N 223 GLN CB CG sing N N 224 GLN CB HB2 sing N N 225 GLN CB HB3 sing N N 226 GLN CG CD sing N N 227 GLN CG HG2 sing N N 228 GLN CG HG3 sing N N 229 GLN CD OE1 doub N N 230 GLN CD NE2 sing N N 231 GLN NE2 HE21 sing N N 232 GLN NE2 HE22 sing N N 233 GLN OXT HXT sing N N 234 GLU N CA sing N N 235 GLU N H sing N N 236 GLU N H2 sing N N 237 GLU CA C sing N N 238 GLU CA CB sing N N 239 GLU CA HA sing N N 240 GLU C O doub N N 241 GLU C OXT sing N N 242 GLU CB CG sing N N 243 GLU CB HB2 sing N N 244 GLU CB HB3 sing N N 245 GLU CG CD sing N N 246 GLU CG HG2 sing N N 247 GLU CG HG3 sing N N 248 GLU CD OE1 doub N N 249 GLU CD OE2 sing N N 250 GLU OE2 HE2 sing N N 251 GLU OXT HXT sing N N 252 GLY N CA sing N N 253 GLY N H sing N N 254 GLY N H2 sing N N 255 GLY CA C sing N N 256 GLY CA HA2 sing N N 257 GLY CA HA3 sing N N 258 GLY C O doub N N 259 GLY C OXT sing N N 260 GLY OXT HXT sing N N 261 HIS N CA sing N N 262 HIS N H sing N N 263 HIS N H2 sing N N 264 HIS CA C sing N N 265 HIS CA CB sing N N 266 HIS CA HA sing N N 267 HIS C O doub N N 268 HIS C OXT sing N N 269 HIS CB CG sing N N 270 HIS CB HB2 sing N N 271 HIS CB HB3 sing N N 272 HIS CG ND1 sing Y N 273 HIS CG CD2 doub Y N 274 HIS ND1 CE1 doub Y N 275 HIS ND1 HD1 sing N N 276 HIS CD2 NE2 sing Y N 277 HIS CD2 HD2 sing N N 278 HIS CE1 NE2 sing Y N 279 HIS CE1 HE1 sing N N 280 HIS NE2 HE2 sing N N 281 HIS OXT HXT sing N N 282 HOH O H1 sing N N 283 HOH O H2 sing N N 284 LEU N CA sing N N 285 LEU N H sing N N 286 LEU N H2 sing N N 287 LEU CA C sing N N 288 LEU CA CB sing N N 289 LEU CA HA sing N N 290 LEU C O doub N N 291 LEU C OXT sing N N 292 LEU CB CG sing N N 293 LEU CB HB2 sing N N 294 LEU CB HB3 sing N N 295 LEU CG CD1 sing N N 296 LEU CG CD2 sing N N 297 LEU CG HG sing N N 298 LEU CD1 HD11 sing N N 299 LEU CD1 HD12 sing N N 300 LEU CD1 HD13 sing N N 301 LEU CD2 HD21 sing N N 302 LEU CD2 HD22 sing N N 303 LEU CD2 HD23 sing N N 304 LEU OXT HXT sing N N 305 LYS N CA sing N N 306 LYS N H sing N N 307 LYS N H2 sing N N 308 LYS CA C sing N N 309 LYS CA CB sing N N 310 LYS CA HA sing N N 311 LYS C O doub N N 312 LYS C OXT sing N N 313 LYS CB CG sing N N 314 LYS CB HB2 sing N N 315 LYS CB HB3 sing N N 316 LYS CG CD sing N N 317 LYS CG HG2 sing N N 318 LYS CG HG3 sing N N 319 LYS CD CE sing N N 320 LYS CD HD2 sing N N 321 LYS CD HD3 sing N N 322 LYS CE NZ sing N N 323 LYS CE HE2 sing N N 324 LYS CE HE3 sing N N 325 LYS NZ HZ1 sing N N 326 LYS NZ HZ2 sing N N 327 LYS NZ HZ3 sing N N 328 LYS OXT HXT sing N N 329 MET N CA sing N N 330 MET N H sing N N 331 MET N H2 sing N N 332 MET CA C sing N N 333 MET CA CB sing N N 334 MET CA HA sing N N 335 MET C O doub N N 336 MET C OXT sing N N 337 MET CB CG sing N N 338 MET CB HB2 sing N N 339 MET CB HB3 sing N N 340 MET CG SD sing N N 341 MET CG HG2 sing N N 342 MET CG HG3 sing N N 343 MET SD CE sing N N 344 MET CE HE1 sing N N 345 MET CE HE2 sing N N 346 MET CE HE3 sing N N 347 MET OXT HXT sing N N 348 PHE N CA sing N N 349 PHE N H sing N N 350 PHE N H2 sing N N 351 PHE CA C sing N N 352 PHE CA CB sing N N 353 PHE CA HA sing N N 354 PHE C O doub N N 355 PHE C OXT sing N N 356 PHE CB CG sing N N 357 PHE CB HB2 sing N N 358 PHE CB HB3 sing N N 359 PHE CG CD1 doub Y N 360 PHE CG CD2 sing Y N 361 PHE CD1 CE1 sing Y N 362 PHE CD1 HD1 sing N N 363 PHE CD2 CE2 doub Y N 364 PHE CD2 HD2 sing N N 365 PHE CE1 CZ doub Y N 366 PHE CE1 HE1 sing N N 367 PHE CE2 CZ sing Y N 368 PHE CE2 HE2 sing N N 369 PHE CZ HZ sing N N 370 PHE OXT HXT sing N N 371 PRO N CA sing N N 372 PRO N CD sing N N 373 PRO N H sing N N 374 PRO CA C sing N N 375 PRO CA CB sing N N 376 PRO CA HA sing N N 377 PRO C O doub N N 378 PRO C OXT sing N N 379 PRO CB CG sing N N 380 PRO CB HB2 sing N N 381 PRO CB HB3 sing N N 382 PRO CG CD sing N N 383 PRO CG HG2 sing N N 384 PRO CG HG3 sing N N 385 PRO CD HD2 sing N N 386 PRO CD HD3 sing N N 387 PRO OXT HXT sing N N 388 SER N CA sing N N 389 SER N H sing N N 390 SER N H2 sing N N 391 SER CA C sing N N 392 SER CA CB sing N N 393 SER CA HA sing N N 394 SER C O doub N N 395 SER C OXT sing N N 396 SER CB OG sing N N 397 SER CB HB2 sing N N 398 SER CB HB3 sing N N 399 SER OG HG sing N N 400 SER OXT HXT sing N N 401 THR N CA sing N N 402 THR N H sing N N 403 THR N H2 sing N N 404 THR CA C sing N N 405 THR CA CB sing N N 406 THR CA HA sing N N 407 THR C O doub N N 408 THR C OXT sing N N 409 THR CB OG1 sing N N 410 THR CB CG2 sing N N 411 THR CB HB sing N N 412 THR OG1 HG1 sing N N 413 THR CG2 HG21 sing N N 414 THR CG2 HG22 sing N N 415 THR CG2 HG23 sing N N 416 THR OXT HXT sing N N 417 TRP N CA sing N N 418 TRP N H sing N N 419 TRP N H2 sing N N 420 TRP CA C sing N N 421 TRP CA CB sing N N 422 TRP CA HA sing N N 423 TRP C O doub N N 424 TRP C OXT sing N N 425 TRP CB CG sing N N 426 TRP CB HB2 sing N N 427 TRP CB HB3 sing N N 428 TRP CG CD1 doub Y N 429 TRP CG CD2 sing Y N 430 TRP CD1 NE1 sing Y N 431 TRP CD1 HD1 sing N N 432 TRP CD2 CE2 doub Y N 433 TRP CD2 CE3 sing Y N 434 TRP NE1 CE2 sing Y N 435 TRP NE1 HE1 sing N N 436 TRP CE2 CZ2 sing Y N 437 TRP CE3 CZ3 doub Y N 438 TRP CE3 HE3 sing N N 439 TRP CZ2 CH2 doub Y N 440 TRP CZ2 HZ2 sing N N 441 TRP CZ3 CH2 sing Y N 442 TRP CZ3 HZ3 sing N N 443 TRP CH2 HH2 sing N N 444 TRP OXT HXT sing N N 445 TYR N CA sing N N 446 TYR N H sing N N 447 TYR N H2 sing N N 448 TYR CA C sing N N 449 TYR CA CB sing N N 450 TYR CA HA sing N N 451 TYR C O doub N N 452 TYR C OXT sing N N 453 TYR CB CG sing N N 454 TYR CB HB2 sing N N 455 TYR CB HB3 sing N N 456 TYR CG CD1 doub Y N 457 TYR CG CD2 sing Y N 458 TYR CD1 CE1 sing Y N 459 TYR CD1 HD1 sing N N 460 TYR CD2 CE2 doub Y N 461 TYR CD2 HD2 sing N N 462 TYR CE1 CZ doub Y N 463 TYR CE1 HE1 sing N N 464 TYR CE2 CZ sing Y N 465 TYR CE2 HE2 sing N N 466 TYR CZ OH sing N N 467 TYR OH HH sing N N 468 TYR OXT HXT sing N N 469 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6VTX 'double helix' 6VTX 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 12 1_555 -0.234 -0.119 -0.011 -7.920 -19.168 0.537 1 B_DA1:DT12_C B 1 ? C 12 ? 20 1 1 B DG 2 1_555 C DC 11 1_555 -0.111 -0.150 -0.314 -3.471 -3.871 -2.184 2 B_DG2:DC11_C B 2 ? C 11 ? 19 1 1 B DG 3 1_555 C DC 10 1_555 -0.220 0.067 -0.021 -2.048 -10.977 6.653 3 B_DG3:DC10_C B 3 ? C 10 ? 19 1 1 B DG 4 1_555 C DC 9 1_555 -0.090 -0.117 -0.230 -17.164 -14.176 -0.346 4 B_DG4:DC9_C B 4 ? C 9 ? 19 1 1 B DG 5 1_555 C DC 8 1_555 -0.077 -0.440 0.085 -1.644 -8.117 -4.330 5 B_DG5:DC8_C B 5 ? C 8 ? 19 1 1 B DG 6 1_555 C DC 7 1_555 -0.491 -0.172 -0.295 -14.181 -9.036 5.374 6 B_DG6:DC7_C B 6 ? C 7 ? 19 1 1 B DT 7 1_555 C DA 6 1_555 -0.444 -0.158 0.273 -3.820 -14.128 4.526 7 B_DT7:DA6_C B 7 ? C 6 ? 20 1 1 B DG 8 1_555 C DC 5 1_555 -0.417 -0.254 0.343 -3.914 -10.955 -3.157 8 B_DG8:DC5_C B 8 ? C 5 ? 19 1 1 B DT 9 1_555 C DA 4 1_555 -0.144 -0.217 0.030 -1.962 -3.543 3.450 9 B_DT9:DA4_C B 9 ? C 4 ? 20 1 1 B DG 10 1_555 C DC 3 1_555 -0.055 0.004 -0.071 0.428 -7.264 3.956 10 B_DG10:DC3_C B 10 ? C 3 ? 19 1 1 B DC 11 1_555 C DG 2 1_555 0.711 -0.256 -0.228 2.464 -3.958 0.374 11 B_DC11:DG2_C B 11 ? C 2 ? 19 1 1 B DC 12 1_555 C DG 1 1_555 0.246 -0.494 -0.068 8.805 -8.471 -2.943 12 B_DC12:DG1_C B 12 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 12 1_555 B DG 2 1_555 C DC 11 1_555 -0.077 -1.233 3.200 3.209 4.925 36.039 -2.618 0.545 2.993 7.895 -5.145 36.499 1 BB_DA1DG2:DC11DT12_CC B 1 ? C 12 ? B 2 ? C 11 ? 1 B DG 2 1_555 C DC 11 1_555 B DG 3 1_555 C DC 10 1_555 0.339 -1.255 3.293 -4.094 3.246 30.545 -2.963 -1.410 3.076 6.105 7.701 30.978 2 BB_DG2DG3:DC10DC11_CC B 2 ? C 11 ? B 3 ? C 10 ? 1 B DG 3 1_555 C DC 10 1_555 B DG 4 1_555 C DC 9 1_555 -0.587 -0.963 3.755 2.351 -2.279 33.049 -1.245 1.481 3.762 -3.995 -4.120 33.206 3 BB_DG3DG4:DC9DC10_CC B 3 ? C 10 ? B 4 ? C 9 ? 1 B DG 4 1_555 C DC 9 1_555 B DG 5 1_555 C DC 8 1_555 -0.676 -0.484 2.918 -3.487 9.321 32.524 -2.147 0.663 2.735 16.176 6.051 33.973 4 BB_DG4DG5:DC8DC9_CC B 4 ? C 9 ? B 5 ? C 8 ? 1 B DG 5 1_555 C DC 8 1_555 B DG 6 1_555 C DC 7 1_555 -0.011 -0.852 3.633 1.928 6.491 34.596 -2.457 0.330 3.416 10.786 -3.204 35.233 5 BB_DG5DG6:DC7DC8_CC B 5 ? C 8 ? B 6 ? C 7 ? 1 B DG 6 1_555 C DC 7 1_555 B DT 7 1_555 C DA 6 1_555 -0.118 -0.567 2.990 -4.708 3.066 27.344 -1.839 -0.775 2.890 6.399 9.827 27.904 6 BB_DG6DT7:DA6DC7_CC B 6 ? C 7 ? B 7 ? C 6 ? 1 B DT 7 1_555 C DA 6 1_555 B DG 8 1_555 C DC 5 1_555 -0.627 -0.168 3.346 -3.164 4.629 33.938 -1.027 0.553 3.338 7.864 5.375 34.385 7 BB_DT7DG8:DC5DA6_CC B 7 ? C 6 ? B 8 ? C 5 ? 1 B DG 8 1_555 C DC 5 1_555 B DT 9 1_555 C DA 4 1_555 0.831 -0.310 3.295 4.327 -0.807 35.310 -0.387 -0.715 3.376 -1.323 -7.100 35.574 8 BB_DG8DT9:DA4DC5_CC B 8 ? C 5 ? B 9 ? C 4 ? 1 B DT 9 1_555 C DA 4 1_555 B DG 10 1_555 C DC 3 1_555 -0.366 -0.022 3.238 0.906 8.681 32.678 -1.427 0.775 3.119 15.096 -1.576 33.793 9 BB_DT9DG10:DC3DA4_CC B 9 ? C 4 ? B 10 ? C 3 ? 1 B DG 10 1_555 C DC 3 1_555 B DC 11 1_555 C DG 2 1_555 -0.128 -0.529 3.337 0.639 -3.139 37.817 -0.402 0.280 3.366 -4.833 -0.984 37.948 10 BB_DG10DC11:DG2DC3_CC B 10 ? C 3 ? B 11 ? C 2 ? 1 B DC 11 1_555 C DG 2 1_555 B DC 12 1_555 C DG 1 1_555 -0.478 -0.750 3.199 -3.414 8.761 33.200 -2.570 0.299 2.945 14.963 5.832 34.469 11 BB_DC11DC12:DG1DG2_CC B 11 ? C 2 ? B 12 ? C 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Library of Medicine (NIH/NLM)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM122763 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 'SODIUM ION' NA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2WBU _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #