HEADER OXIDOREDUCTASE 13-FEB-20 6VTY TITLE CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM DIHYDROOROTATE TITLE 2 DEHYDROGENASE BOUND WITH INHIBITOR DSM483 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: DHODEHASE,DIHYDROOROTATE OXIDASE; COMPND 5 EC: 1.3.5.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM (ISOLATE 3D7); SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PFF0160C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS OXIDOREDUCTASE, MITOCHONDRIA, ALPHA-BETA BARREL EXPDTA X-RAY DIFFRACTION AUTHOR X.DENG,M.PHILLIPS REVDAT 3 11-OCT-23 6VTY 1 REMARK REVDAT 2 27-MAY-20 6VTY 1 JRNL REVDAT 1 22-APR-20 6VTY 0 JRNL AUTH S.KOKKONDA,X.DENG,K.L.WHITE,F.EL MAZOUNI,J.WHITE, JRNL AUTH 2 D.M.SHACKLEFORD,K.KATNENI,F.C.K.CHIU,H.BARKER,J.MCLAREN, JRNL AUTH 3 E.CRIGHTON,G.CHEN,I.ANGULO-BARTUREN,M.B.JIMENEZ-DIAZ, JRNL AUTH 4 S.FERRER,L.HUERTAS-VALENTIN,M.S.MARTINEZ-MARTINEZ, JRNL AUTH 5 M.J.LAFUENTE-MONASTERIO,R.CHITTIMALLA,S.P.SHAHI,S.WITTLIN, JRNL AUTH 6 D.WATERSON,J.N.BURROWS,D.MATTHEWS,D.TOMCHICK,P.K.RATHOD, JRNL AUTH 7 M.J.PALMER,S.A.CHARMAN,M.A.PHILLIPS JRNL TITL LEAD OPTIMIZATION OF A PYRROLE-BASED DIHYDROOROTATE JRNL TITL 2 DEHYDROGENASE INHIBITOR SERIES FOR THE TREATMENT OF MALARIA. JRNL REF J.MED.CHEM. V. 63 4929 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32248693 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00311 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.16 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 148953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 12300 REMARK 3 ANGLE : 1.511 16609 REMARK 3 CHIRALITY : 0.085 1837 REMARK 3 PLANARITY : 0.013 2103 REMARK 3 DIHEDRAL : 15.707 7434 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VTY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000247082. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4-5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97924 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V718 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V718 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 161464 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 42.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3I65 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M AMMONIUM ACETATE, 0.1 M TRI REMARK 280 -SODIUM CITRATE, PH 5.6, 25% PEG4000, 16% GLYCEROL 10 MM DTT, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.04400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.12600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.76050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 93.12600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.04400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.76050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 139 REMARK 465 GLY A 140 REMARK 465 HIS A 141 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 ALA A 147 REMARK 465 GLU A 148 REMARK 465 ASN A 149 REMARK 465 LEU A 150 REMARK 465 TYR A 151 REMARK 465 PHE A 152 REMARK 465 GLN A 153 REMARK 465 GLY A 154 REMARK 465 ILE A 379 REMARK 465 MET A 380 REMARK 465 ASN A 381 REMARK 465 ASP A 382 REMARK 465 GLU A 383 REMARK 465 SER A 384 REMARK 465 THR A 385 REMARK 465 TYR A 386 REMARK 465 ASN A 387 REMARK 465 GLU A 388 REMARK 465 ASP A 389 REMARK 465 ASN A 390 REMARK 465 LYS A 391 REMARK 465 ILE A 392 REMARK 465 VAL A 393 REMARK 465 GLU A 394 REMARK 465 LYS A 395 REMARK 465 LYS A 396 REMARK 465 ASN A 397 REMARK 465 ASN A 398 REMARK 465 PHE A 399 REMARK 465 ASN A 400 REMARK 465 LYS A 401 REMARK 465 ASN A 402 REMARK 465 ASN A 403 REMARK 465 SER A 404 REMARK 465 HIS A 405 REMARK 465 MET A 406 REMARK 465 MET A 407 REMARK 465 LYS A 408 REMARK 465 ASP A 409 REMARK 465 ALA A 410 REMARK 465 LYS A 411 REMARK 465 ASP A 412 REMARK 465 ASN A 413 REMARK 465 SER A 567 REMARK 465 LYS A 568 REMARK 465 SER A 569 REMARK 465 MET B 139 REMARK 465 GLY B 140 REMARK 465 HIS B 141 REMARK 465 HIS B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 465 ALA B 147 REMARK 465 GLU B 148 REMARK 465 ASN B 149 REMARK 465 LEU B 150 REMARK 465 TYR B 151 REMARK 465 PHE B 152 REMARK 465 GLN B 153 REMARK 465 GLY B 154 REMARK 465 ALA B 155 REMARK 465 ASP B 156 REMARK 465 PRO B 157 REMARK 465 PHE B 158 REMARK 465 GLU B 159 REMARK 465 ILE B 379 REMARK 465 MET B 380 REMARK 465 ASN B 381 REMARK 465 ASP B 382 REMARK 465 GLU B 383 REMARK 465 SER B 384 REMARK 465 THR B 385 REMARK 465 TYR B 386 REMARK 465 ASN B 387 REMARK 465 GLU B 388 REMARK 465 ASP B 389 REMARK 465 ASN B 390 REMARK 465 LYS B 391 REMARK 465 ILE B 392 REMARK 465 VAL B 393 REMARK 465 GLU B 394 REMARK 465 LYS B 395 REMARK 465 LYS B 396 REMARK 465 ASN B 397 REMARK 465 ASN B 398 REMARK 465 PHE B 399 REMARK 465 ASN B 400 REMARK 465 LYS B 401 REMARK 465 ASN B 402 REMARK 465 ASN B 403 REMARK 465 SER B 404 REMARK 465 HIS B 405 REMARK 465 MET B 406 REMARK 465 MET B 407 REMARK 465 LYS B 408 REMARK 465 ASP B 409 REMARK 465 ALA B 410 REMARK 465 LYS B 411 REMARK 465 ASP B 412 REMARK 465 ASN B 413 REMARK 465 SER B 567 REMARK 465 LYS B 568 REMARK 465 SER B 569 REMARK 465 MET C 139 REMARK 465 GLY C 140 REMARK 465 HIS C 141 REMARK 465 HIS C 142 REMARK 465 HIS C 143 REMARK 465 HIS C 144 REMARK 465 HIS C 145 REMARK 465 HIS C 146 REMARK 465 ALA C 147 REMARK 465 GLU C 148 REMARK 465 ASN C 149 REMARK 465 LEU C 150 REMARK 465 TYR C 151 REMARK 465 PHE C 152 REMARK 465 GLN C 153 REMARK 465 GLY C 154 REMARK 465 ALA C 155 REMARK 465 ASP C 156 REMARK 465 PRO C 157 REMARK 465 PHE C 158 REMARK 465 GLU C 159 REMARK 465 SER C 160 REMARK 465 TYR C 161 REMARK 465 ASN C 162 REMARK 465 PRO C 163 REMARK 465 GLU C 164 REMARK 465 PHE C 165 REMARK 465 ILE C 379 REMARK 465 MET C 380 REMARK 465 ASN C 381 REMARK 465 ASP C 382 REMARK 465 GLU C 383 REMARK 465 SER C 384 REMARK 465 THR C 385 REMARK 465 TYR C 386 REMARK 465 ASN C 387 REMARK 465 GLU C 388 REMARK 465 ASP C 389 REMARK 465 ASN C 390 REMARK 465 LYS C 391 REMARK 465 ILE C 392 REMARK 465 VAL C 393 REMARK 465 GLU C 394 REMARK 465 LYS C 395 REMARK 465 LYS C 396 REMARK 465 ASN C 397 REMARK 465 ASN C 398 REMARK 465 PHE C 399 REMARK 465 ASN C 400 REMARK 465 LYS C 401 REMARK 465 ASN C 402 REMARK 465 ASN C 403 REMARK 465 SER C 404 REMARK 465 HIS C 405 REMARK 465 MET C 406 REMARK 465 MET C 407 REMARK 465 LYS C 408 REMARK 465 ASP C 409 REMARK 465 ALA C 410 REMARK 465 LYS C 411 REMARK 465 ASP C 412 REMARK 465 ASN C 413 REMARK 465 SER C 567 REMARK 465 LYS C 568 REMARK 465 SER C 569 REMARK 465 MET D 139 REMARK 465 GLY D 140 REMARK 465 HIS D 141 REMARK 465 HIS D 142 REMARK 465 HIS D 143 REMARK 465 HIS D 144 REMARK 465 HIS D 145 REMARK 465 HIS D 146 REMARK 465 ALA D 147 REMARK 465 GLU D 148 REMARK 465 ASN D 149 REMARK 465 LEU D 150 REMARK 465 TYR D 151 REMARK 465 PHE D 152 REMARK 465 GLN D 153 REMARK 465 GLY D 154 REMARK 465 ALA D 155 REMARK 465 ASP D 156 REMARK 465 PRO D 157 REMARK 465 PHE D 158 REMARK 465 GLU D 159 REMARK 465 SER D 160 REMARK 465 TYR D 161 REMARK 465 ASN D 162 REMARK 465 ASN D 378 REMARK 465 ILE D 379 REMARK 465 MET D 380 REMARK 465 ASN D 381 REMARK 465 ASP D 382 REMARK 465 GLU D 383 REMARK 465 SER D 384 REMARK 465 THR D 385 REMARK 465 TYR D 386 REMARK 465 ASN D 387 REMARK 465 GLU D 388 REMARK 465 ASP D 389 REMARK 465 ASN D 390 REMARK 465 LYS D 391 REMARK 465 ILE D 392 REMARK 465 VAL D 393 REMARK 465 GLU D 394 REMARK 465 LYS D 395 REMARK 465 LYS D 396 REMARK 465 ASN D 397 REMARK 465 ASN D 398 REMARK 465 PHE D 399 REMARK 465 ASN D 400 REMARK 465 LYS D 401 REMARK 465 ASN D 402 REMARK 465 ASN D 403 REMARK 465 SER D 404 REMARK 465 HIS D 405 REMARK 465 MET D 406 REMARK 465 MET D 407 REMARK 465 LYS D 408 REMARK 465 ASP D 409 REMARK 465 ALA D 410 REMARK 465 LYS D 411 REMARK 465 ASP D 412 REMARK 465 ASN D 413 REMARK 465 SER D 567 REMARK 465 LYS D 568 REMARK 465 SER D 569 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 560 CB GLU A 560 CG -0.153 REMARK 500 CYS B 233 CB CYS B 233 SG -0.251 REMARK 500 GLU C 246 CG GLU C 246 CD 0.113 REMARK 500 VAL C 524 CB VAL C 524 CG2 -0.130 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 352 NH1 - CZ - NH2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG C 352 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 213 -125.50 45.15 REMARK 500 ASP A 228 77.68 -118.87 REMARK 500 CYS A 233 51.31 -145.97 REMARK 500 TYR A 528 -67.92 -150.94 REMARK 500 LYS B 213 -126.03 52.84 REMARK 500 ASP B 228 77.01 -113.26 REMARK 500 CYS B 233 21.34 -144.96 REMARK 500 ARG B 262 10.74 -145.41 REMARK 500 TYR B 528 -69.72 -145.70 REMARK 500 LYS C 213 -126.69 45.91 REMARK 500 ASP C 228 75.53 -113.56 REMARK 500 CYS C 233 56.84 -146.22 REMARK 500 TYR C 528 -70.40 -146.33 REMARK 500 LYS D 213 -130.67 54.34 REMARK 500 CYS D 233 51.26 -147.31 REMARK 500 TYR D 528 -72.60 -153.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C1353 DISTANCE = 5.83 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RLA A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ORO A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RLA B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ORO B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RLA C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN C 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ORO C 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RLA D 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN D 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ORO D 1003 DBREF 6VTY A 158 569 UNP Q08210 PYRD_PLAF7 158 569 DBREF 6VTY B 158 569 UNP Q08210 PYRD_PLAF7 158 569 DBREF 6VTY C 158 569 UNP Q08210 PYRD_PLAF7 158 569 DBREF 6VTY D 158 569 UNP Q08210 PYRD_PLAF7 158 569 SEQADV 6VTY MET A 139 UNP Q08210 INITIATING METHIONINE SEQADV 6VTY GLY A 140 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS A 141 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS A 142 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS A 143 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS A 144 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS A 145 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS A 146 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA A 147 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLU A 148 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASN A 149 UNP Q08210 EXPRESSION TAG SEQADV 6VTY LEU A 150 UNP Q08210 EXPRESSION TAG SEQADV 6VTY TYR A 151 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PHE A 152 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLN A 153 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLY A 154 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA A 155 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASP A 156 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PRO A 157 UNP Q08210 EXPRESSION TAG SEQADV 6VTY MET B 139 UNP Q08210 INITIATING METHIONINE SEQADV 6VTY GLY B 140 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS B 141 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS B 142 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS B 143 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS B 144 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS B 145 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS B 146 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA B 147 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLU B 148 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASN B 149 UNP Q08210 EXPRESSION TAG SEQADV 6VTY LEU B 150 UNP Q08210 EXPRESSION TAG SEQADV 6VTY TYR B 151 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PHE B 152 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLN B 153 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLY B 154 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA B 155 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASP B 156 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PRO B 157 UNP Q08210 EXPRESSION TAG SEQADV 6VTY MET C 139 UNP Q08210 INITIATING METHIONINE SEQADV 6VTY GLY C 140 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS C 141 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS C 142 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS C 143 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS C 144 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS C 145 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS C 146 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA C 147 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLU C 148 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASN C 149 UNP Q08210 EXPRESSION TAG SEQADV 6VTY LEU C 150 UNP Q08210 EXPRESSION TAG SEQADV 6VTY TYR C 151 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PHE C 152 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLN C 153 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLY C 154 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA C 155 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASP C 156 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PRO C 157 UNP Q08210 EXPRESSION TAG SEQADV 6VTY MET D 139 UNP Q08210 INITIATING METHIONINE SEQADV 6VTY GLY D 140 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS D 141 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS D 142 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS D 143 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS D 144 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS D 145 UNP Q08210 EXPRESSION TAG SEQADV 6VTY HIS D 146 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA D 147 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLU D 148 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASN D 149 UNP Q08210 EXPRESSION TAG SEQADV 6VTY LEU D 150 UNP Q08210 EXPRESSION TAG SEQADV 6VTY TYR D 151 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PHE D 152 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLN D 153 UNP Q08210 EXPRESSION TAG SEQADV 6VTY GLY D 154 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ALA D 155 UNP Q08210 EXPRESSION TAG SEQADV 6VTY ASP D 156 UNP Q08210 EXPRESSION TAG SEQADV 6VTY PRO D 157 UNP Q08210 EXPRESSION TAG SEQRES 1 A 431 MET GLY HIS HIS HIS HIS HIS HIS ALA GLU ASN LEU TYR SEQRES 2 A 431 PHE GLN GLY ALA ASP PRO PHE GLU SER TYR ASN PRO GLU SEQRES 3 A 431 PHE PHE LEU TYR ASP ILE PHE LEU LYS PHE CYS LEU LYS SEQRES 4 A 431 TYR ILE ASP GLY GLU ILE CYS HIS ASP LEU PHE LEU LEU SEQRES 5 A 431 LEU GLY LYS TYR ASN ILE LEU PRO TYR ASP THR SER ASN SEQRES 6 A 431 ASP SER ILE TYR ALA CYS THR ASN ILE LYS HIS LEU ASP SEQRES 7 A 431 PHE ILE ASN PRO PHE GLY VAL ALA ALA GLY PHE ASP LYS SEQRES 8 A 431 ASN GLY VAL CYS ILE ASP SER ILE LEU LYS LEU GLY PHE SEQRES 9 A 431 SER PHE ILE GLU ILE GLY THR ILE THR PRO ARG GLY GLN SEQRES 10 A 431 THR GLY ASN ALA LYS PRO ARG ILE PHE ARG ASP VAL GLU SEQRES 11 A 431 SER ARG SER ILE ILE ASN SER CYS GLY PHE ASN ASN MET SEQRES 12 A 431 GLY CYS ASP LYS VAL THR GLU ASN LEU ILE LEU PHE ARG SEQRES 13 A 431 LYS ARG GLN GLU GLU ASP LYS LEU LEU SER LYS HIS ILE SEQRES 14 A 431 VAL GLY VAL SER ILE GLY LYS ASN LYS ASP THR VAL ASN SEQRES 15 A 431 ILE VAL ASP ASP LEU LYS TYR CYS ILE ASN LYS ILE GLY SEQRES 16 A 431 ARG TYR ALA ASP TYR ILE ALA ILE ASN VAL SER SER PRO SEQRES 17 A 431 ASN THR PRO GLY LEU ARG ASP ASN GLN GLU ALA GLY LYS SEQRES 18 A 431 LEU LYS ASN ILE ILE LEU SER VAL LYS GLU GLU ILE ASP SEQRES 19 A 431 ASN LEU GLU LYS ASN ASN ILE MET ASN ASP GLU SER THR SEQRES 20 A 431 TYR ASN GLU ASP ASN LYS ILE VAL GLU LYS LYS ASN ASN SEQRES 21 A 431 PHE ASN LYS ASN ASN SER HIS MET MET LYS ASP ALA LYS SEQRES 22 A 431 ASP ASN PHE LEU TRP PHE ASN THR THR LYS LYS LYS PRO SEQRES 23 A 431 LEU VAL PHE VAL LYS LEU ALA PRO ASP LEU ASN GLN GLU SEQRES 24 A 431 GLN LYS LYS GLU ILE ALA ASP VAL LEU LEU GLU THR ASN SEQRES 25 A 431 ILE ASP GLY MET ILE ILE SER ASN THR THR THR GLN ILE SEQRES 26 A 431 ASN ASP ILE LYS SER PHE GLU ASN LYS LYS GLY GLY VAL SEQRES 27 A 431 SER GLY ALA LYS LEU LYS ASP ILE SER THR LYS PHE ILE SEQRES 28 A 431 CYS GLU MET TYR ASN TYR THR ASN LYS GLN ILE PRO ILE SEQRES 29 A 431 ILE ALA SER GLY GLY ILE PHE SER GLY LEU ASP ALA LEU SEQRES 30 A 431 GLU LYS ILE GLU ALA GLY ALA SER VAL CYS GLN LEU TYR SEQRES 31 A 431 SER CYS LEU VAL PHE ASN GLY MET LYS SER ALA VAL GLN SEQRES 32 A 431 ILE LYS ARG GLU LEU ASN HIS LEU LEU TYR GLN ARG GLY SEQRES 33 A 431 TYR TYR ASN LEU LYS GLU ALA ILE GLY ARG LYS HIS SER SEQRES 34 A 431 LYS SER SEQRES 1 B 431 MET GLY HIS HIS HIS HIS HIS HIS ALA GLU ASN LEU TYR SEQRES 2 B 431 PHE GLN GLY ALA ASP PRO PHE GLU SER TYR ASN PRO GLU SEQRES 3 B 431 PHE PHE LEU TYR ASP ILE PHE LEU LYS PHE CYS LEU LYS SEQRES 4 B 431 TYR ILE ASP GLY GLU ILE CYS HIS ASP LEU PHE LEU LEU SEQRES 5 B 431 LEU GLY LYS TYR ASN ILE LEU PRO TYR ASP THR SER ASN SEQRES 6 B 431 ASP SER ILE TYR ALA CYS THR ASN ILE LYS HIS LEU ASP SEQRES 7 B 431 PHE ILE ASN PRO PHE GLY VAL ALA ALA GLY PHE ASP LYS SEQRES 8 B 431 ASN GLY VAL CYS ILE ASP SER ILE LEU LYS LEU GLY PHE SEQRES 9 B 431 SER PHE ILE GLU ILE GLY THR ILE THR PRO ARG GLY GLN SEQRES 10 B 431 THR GLY ASN ALA LYS PRO ARG ILE PHE ARG ASP VAL GLU SEQRES 11 B 431 SER ARG SER ILE ILE ASN SER CYS GLY PHE ASN ASN MET SEQRES 12 B 431 GLY CYS ASP LYS VAL THR GLU ASN LEU ILE LEU PHE ARG SEQRES 13 B 431 LYS ARG GLN GLU GLU ASP LYS LEU LEU SER LYS HIS ILE SEQRES 14 B 431 VAL GLY VAL SER ILE GLY LYS ASN LYS ASP THR VAL ASN SEQRES 15 B 431 ILE VAL ASP ASP LEU LYS TYR CYS ILE ASN LYS ILE GLY SEQRES 16 B 431 ARG TYR ALA ASP TYR ILE ALA ILE ASN VAL SER SER PRO SEQRES 17 B 431 ASN THR PRO GLY LEU ARG ASP ASN GLN GLU ALA GLY LYS SEQRES 18 B 431 LEU LYS ASN ILE ILE LEU SER VAL LYS GLU GLU ILE ASP SEQRES 19 B 431 ASN LEU GLU LYS ASN ASN ILE MET ASN ASP GLU SER THR SEQRES 20 B 431 TYR ASN GLU ASP ASN LYS ILE VAL GLU LYS LYS ASN ASN SEQRES 21 B 431 PHE ASN LYS ASN ASN SER HIS MET MET LYS ASP ALA LYS SEQRES 22 B 431 ASP ASN PHE LEU TRP PHE ASN THR THR LYS LYS LYS PRO SEQRES 23 B 431 LEU VAL PHE VAL LYS LEU ALA PRO ASP LEU ASN GLN GLU SEQRES 24 B 431 GLN LYS LYS GLU ILE ALA ASP VAL LEU LEU GLU THR ASN SEQRES 25 B 431 ILE ASP GLY MET ILE ILE SER ASN THR THR THR GLN ILE SEQRES 26 B 431 ASN ASP ILE LYS SER PHE GLU ASN LYS LYS GLY GLY VAL SEQRES 27 B 431 SER GLY ALA LYS LEU LYS ASP ILE SER THR LYS PHE ILE SEQRES 28 B 431 CYS GLU MET TYR ASN TYR THR ASN LYS GLN ILE PRO ILE SEQRES 29 B 431 ILE ALA SER GLY GLY ILE PHE SER GLY LEU ASP ALA LEU SEQRES 30 B 431 GLU LYS ILE GLU ALA GLY ALA SER VAL CYS GLN LEU TYR SEQRES 31 B 431 SER CYS LEU VAL PHE ASN GLY MET LYS SER ALA VAL GLN SEQRES 32 B 431 ILE LYS ARG GLU LEU ASN HIS LEU LEU TYR GLN ARG GLY SEQRES 33 B 431 TYR TYR ASN LEU LYS GLU ALA ILE GLY ARG LYS HIS SER SEQRES 34 B 431 LYS SER SEQRES 1 C 431 MET GLY HIS HIS HIS HIS HIS HIS ALA GLU ASN LEU TYR SEQRES 2 C 431 PHE GLN GLY ALA ASP PRO PHE GLU SER TYR ASN PRO GLU SEQRES 3 C 431 PHE PHE LEU TYR ASP ILE PHE LEU LYS PHE CYS LEU LYS SEQRES 4 C 431 TYR ILE ASP GLY GLU ILE CYS HIS ASP LEU PHE LEU LEU SEQRES 5 C 431 LEU GLY LYS TYR ASN ILE LEU PRO TYR ASP THR SER ASN SEQRES 6 C 431 ASP SER ILE TYR ALA CYS THR ASN ILE LYS HIS LEU ASP SEQRES 7 C 431 PHE ILE ASN PRO PHE GLY VAL ALA ALA GLY PHE ASP LYS SEQRES 8 C 431 ASN GLY VAL CYS ILE ASP SER ILE LEU LYS LEU GLY PHE SEQRES 9 C 431 SER PHE ILE GLU ILE GLY THR ILE THR PRO ARG GLY GLN SEQRES 10 C 431 THR GLY ASN ALA LYS PRO ARG ILE PHE ARG ASP VAL GLU SEQRES 11 C 431 SER ARG SER ILE ILE ASN SER CYS GLY PHE ASN ASN MET SEQRES 12 C 431 GLY CYS ASP LYS VAL THR GLU ASN LEU ILE LEU PHE ARG SEQRES 13 C 431 LYS ARG GLN GLU GLU ASP LYS LEU LEU SER LYS HIS ILE SEQRES 14 C 431 VAL GLY VAL SER ILE GLY LYS ASN LYS ASP THR VAL ASN SEQRES 15 C 431 ILE VAL ASP ASP LEU LYS TYR CYS ILE ASN LYS ILE GLY SEQRES 16 C 431 ARG TYR ALA ASP TYR ILE ALA ILE ASN VAL SER SER PRO SEQRES 17 C 431 ASN THR PRO GLY LEU ARG ASP ASN GLN GLU ALA GLY LYS SEQRES 18 C 431 LEU LYS ASN ILE ILE LEU SER VAL LYS GLU GLU ILE ASP SEQRES 19 C 431 ASN LEU GLU LYS ASN ASN ILE MET ASN ASP GLU SER THR SEQRES 20 C 431 TYR ASN GLU ASP ASN LYS ILE VAL GLU LYS LYS ASN ASN SEQRES 21 C 431 PHE ASN LYS ASN ASN SER HIS MET MET LYS ASP ALA LYS SEQRES 22 C 431 ASP ASN PHE LEU TRP PHE ASN THR THR LYS LYS LYS PRO SEQRES 23 C 431 LEU VAL PHE VAL LYS LEU ALA PRO ASP LEU ASN GLN GLU SEQRES 24 C 431 GLN LYS LYS GLU ILE ALA ASP VAL LEU LEU GLU THR ASN SEQRES 25 C 431 ILE ASP GLY MET ILE ILE SER ASN THR THR THR GLN ILE SEQRES 26 C 431 ASN ASP ILE LYS SER PHE GLU ASN LYS LYS GLY GLY VAL SEQRES 27 C 431 SER GLY ALA LYS LEU LYS ASP ILE SER THR LYS PHE ILE SEQRES 28 C 431 CYS GLU MET TYR ASN TYR THR ASN LYS GLN ILE PRO ILE SEQRES 29 C 431 ILE ALA SER GLY GLY ILE PHE SER GLY LEU ASP ALA LEU SEQRES 30 C 431 GLU LYS ILE GLU ALA GLY ALA SER VAL CYS GLN LEU TYR SEQRES 31 C 431 SER CYS LEU VAL PHE ASN GLY MET LYS SER ALA VAL GLN SEQRES 32 C 431 ILE LYS ARG GLU LEU ASN HIS LEU LEU TYR GLN ARG GLY SEQRES 33 C 431 TYR TYR ASN LEU LYS GLU ALA ILE GLY ARG LYS HIS SER SEQRES 34 C 431 LYS SER SEQRES 1 D 431 MET GLY HIS HIS HIS HIS HIS HIS ALA GLU ASN LEU TYR SEQRES 2 D 431 PHE GLN GLY ALA ASP PRO PHE GLU SER TYR ASN PRO GLU SEQRES 3 D 431 PHE PHE LEU TYR ASP ILE PHE LEU LYS PHE CYS LEU LYS SEQRES 4 D 431 TYR ILE ASP GLY GLU ILE CYS HIS ASP LEU PHE LEU LEU SEQRES 5 D 431 LEU GLY LYS TYR ASN ILE LEU PRO TYR ASP THR SER ASN SEQRES 6 D 431 ASP SER ILE TYR ALA CYS THR ASN ILE LYS HIS LEU ASP SEQRES 7 D 431 PHE ILE ASN PRO PHE GLY VAL ALA ALA GLY PHE ASP LYS SEQRES 8 D 431 ASN GLY VAL CYS ILE ASP SER ILE LEU LYS LEU GLY PHE SEQRES 9 D 431 SER PHE ILE GLU ILE GLY THR ILE THR PRO ARG GLY GLN SEQRES 10 D 431 THR GLY ASN ALA LYS PRO ARG ILE PHE ARG ASP VAL GLU SEQRES 11 D 431 SER ARG SER ILE ILE ASN SER CYS GLY PHE ASN ASN MET SEQRES 12 D 431 GLY CYS ASP LYS VAL THR GLU ASN LEU ILE LEU PHE ARG SEQRES 13 D 431 LYS ARG GLN GLU GLU ASP LYS LEU LEU SER LYS HIS ILE SEQRES 14 D 431 VAL GLY VAL SER ILE GLY LYS ASN LYS ASP THR VAL ASN SEQRES 15 D 431 ILE VAL ASP ASP LEU LYS TYR CYS ILE ASN LYS ILE GLY SEQRES 16 D 431 ARG TYR ALA ASP TYR ILE ALA ILE ASN VAL SER SER PRO SEQRES 17 D 431 ASN THR PRO GLY LEU ARG ASP ASN GLN GLU ALA GLY LYS SEQRES 18 D 431 LEU LYS ASN ILE ILE LEU SER VAL LYS GLU GLU ILE ASP SEQRES 19 D 431 ASN LEU GLU LYS ASN ASN ILE MET ASN ASP GLU SER THR SEQRES 20 D 431 TYR ASN GLU ASP ASN LYS ILE VAL GLU LYS LYS ASN ASN SEQRES 21 D 431 PHE ASN LYS ASN ASN SER HIS MET MET LYS ASP ALA LYS SEQRES 22 D 431 ASP ASN PHE LEU TRP PHE ASN THR THR LYS LYS LYS PRO SEQRES 23 D 431 LEU VAL PHE VAL LYS LEU ALA PRO ASP LEU ASN GLN GLU SEQRES 24 D 431 GLN LYS LYS GLU ILE ALA ASP VAL LEU LEU GLU THR ASN SEQRES 25 D 431 ILE ASP GLY MET ILE ILE SER ASN THR THR THR GLN ILE SEQRES 26 D 431 ASN ASP ILE LYS SER PHE GLU ASN LYS LYS GLY GLY VAL SEQRES 27 D 431 SER GLY ALA LYS LEU LYS ASP ILE SER THR LYS PHE ILE SEQRES 28 D 431 CYS GLU MET TYR ASN TYR THR ASN LYS GLN ILE PRO ILE SEQRES 29 D 431 ILE ALA SER GLY GLY ILE PHE SER GLY LEU ASP ALA LEU SEQRES 30 D 431 GLU LYS ILE GLU ALA GLY ALA SER VAL CYS GLN LEU TYR SEQRES 31 D 431 SER CYS LEU VAL PHE ASN GLY MET LYS SER ALA VAL GLN SEQRES 32 D 431 ILE LYS ARG GLU LEU ASN HIS LEU LEU TYR GLN ARG GLY SEQRES 33 D 431 TYR TYR ASN LEU LYS GLU ALA ILE GLY ARG LYS HIS SER SEQRES 34 D 431 LYS SER HET RLA A1001 40 HET FMN A1002 49 HET ORO A1003 14 HET RLA B1001 40 HET FMN B1002 49 HET ORO B1003 14 HET RLA C1001 40 HET FMN C1002 49 HET ORO C1003 14 HET RLA D1001 40 HET FMN D1002 49 HET ORO D1003 14 HETNAM RLA ETHYL 3,5-DIMETHYL-4-{[4-(TRIFLUOROMETHYL) HETNAM 2 RLA PHENYL]METHYL}-1H-PYRROLE-2-CARBOXYLATE HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM ORO OROTIC ACID HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 5 RLA 4(C17 H18 F3 N O2) FORMUL 6 FMN 4(C17 H21 N4 O9 P) FORMUL 7 ORO 4(C5 H4 N2 O4) FORMUL 17 HOH *897(H2 O) HELIX 1 AA1 PHE A 165 ILE A 179 1 15 HELIX 2 AA2 ASP A 180 TYR A 194 1 15 HELIX 3 AA3 SER A 205 CYS A 209 5 5 HELIX 4 AA4 CYS A 233 LYS A 239 1 7 HELIX 5 AA5 GLY A 282 GLU A 299 1 18 HELIX 6 AA6 ASN A 320 GLY A 333 1 14 HELIX 7 AA7 ARG A 334 ALA A 336 5 3 HELIX 8 AA8 GLY A 350 GLN A 355 5 6 HELIX 9 AA9 GLU A 356 ASN A 378 1 23 HELIX 10 AB1 ASN A 435 THR A 449 1 15 HELIX 11 AB2 ILE A 466 GLU A 470 5 5 HELIX 12 AB3 LEU A 481 THR A 496 1 16 HELIX 13 AB4 SER A 510 GLY A 521 1 12 HELIX 14 AB5 TYR A 528 GLY A 535 1 8 HELIX 15 AB6 LYS A 537 GLY A 554 1 18 HELIX 16 AB7 LEU A 558 ILE A 562 5 5 HELIX 17 AB8 PHE B 165 ILE B 179 1 15 HELIX 18 AB9 ASP B 180 TYR B 194 1 15 HELIX 19 AC1 SER B 205 CYS B 209 5 5 HELIX 20 AC2 CYS B 233 LEU B 240 1 8 HELIX 21 AC3 GLY B 282 ASP B 300 1 19 HELIX 22 AC4 ASN B 320 GLY B 333 1 14 HELIX 23 AC5 ARG B 334 ALA B 336 5 3 HELIX 24 AC6 GLY B 350 GLN B 355 5 6 HELIX 25 AC7 GLU B 356 ASN B 373 1 18 HELIX 26 AC8 ASN B 435 ASN B 450 1 16 HELIX 27 AC9 ILE B 466 GLU B 470 5 5 HELIX 28 AD1 LEU B 481 THR B 496 1 16 HELIX 29 AD2 SER B 510 GLY B 521 1 12 HELIX 30 AD3 TYR B 528 GLY B 535 1 8 HELIX 31 AD4 LYS B 537 ARG B 553 1 17 HELIX 32 AD5 LEU B 558 ILE B 562 5 5 HELIX 33 AD6 LEU C 167 ILE C 179 1 13 HELIX 34 AD7 ASP C 180 TYR C 194 1 15 HELIX 35 AD8 SER C 205 CYS C 209 5 5 HELIX 36 AD9 CYS C 233 LYS C 239 1 7 HELIX 37 AE1 GLY C 282 GLU C 298 1 17 HELIX 38 AE2 ASN C 320 GLY C 333 1 14 HELIX 39 AE3 ARG C 334 ALA C 336 5 3 HELIX 40 AE4 GLY C 350 GLN C 355 5 6 HELIX 41 AE5 GLU C 356 ASN C 378 1 23 HELIX 42 AE6 ASN C 435 THR C 449 1 15 HELIX 43 AE7 ILE C 466 GLU C 470 5 5 HELIX 44 AE8 LEU C 481 THR C 496 1 16 HELIX 45 AE9 SER C 510 GLY C 521 1 12 HELIX 46 AF1 TYR C 528 GLY C 535 1 8 HELIX 47 AF2 LYS C 537 GLY C 554 1 18 HELIX 48 AF3 ASN C 557 ILE C 562 5 6 HELIX 49 AF4 PHE D 165 ILE D 179 1 15 HELIX 50 AF5 ASP D 180 TYR D 194 1 15 HELIX 51 AF6 SER D 205 CYS D 209 5 5 HELIX 52 AF7 CYS D 233 LEU D 240 1 8 HELIX 53 AF8 GLY D 282 GLU D 298 1 17 HELIX 54 AF9 ASN D 320 GLY D 333 1 14 HELIX 55 AG1 ARG D 334 ALA D 336 5 3 HELIX 56 AG2 GLY D 350 GLN D 355 5 6 HELIX 57 AG3 GLU D 356 ASN D 377 1 22 HELIX 58 AG4 ASN D 435 ASN D 450 1 16 HELIX 59 AG5 ILE D 466 GLU D 470 5 5 HELIX 60 AG6 LEU D 481 THR D 496 1 16 HELIX 61 AG7 SER D 510 GLY D 521 1 12 HELIX 62 AG8 TYR D 528 GLY D 535 1 8 HELIX 63 AG9 LYS D 537 GLY D 554 1 18 HELIX 64 AH1 ASN D 557 ILE D 562 5 6 SHEET 1 AA1 2 THR A 210 ILE A 212 0 SHEET 2 AA1 2 LEU A 215 PHE A 217 -1 O LEU A 215 N ILE A 212 SHEET 1 AA2 9 PHE A 221 VAL A 223 0 SHEET 2 AA2 9 PHE A 244 ILE A 250 1 O GLU A 246 N VAL A 223 SHEET 3 AA2 9 ILE A 307 ILE A 312 1 O SER A 311 N ILE A 247 SHEET 4 AA2 9 TYR A 338 ASN A 342 1 O ALA A 340 N ILE A 312 SHEET 5 AA2 9 LEU A 425 LEU A 430 1 O PHE A 427 N ILE A 339 SHEET 6 AA2 9 GLY A 453 ILE A 456 1 O ILE A 455 N VAL A 428 SHEET 7 AA2 9 ILE A 502 SER A 505 1 O ILE A 503 N MET A 454 SHEET 8 AA2 9 ALA A 522 LEU A 527 1 O VAL A 524 N ALA A 504 SHEET 9 AA2 9 PHE A 221 VAL A 223 1 N GLY A 222 O LEU A 527 SHEET 1 AA3 3 ILE A 263 ASP A 266 0 SHEET 2 AA3 3 SER A 271 ASN A 274 -1 O SER A 271 N ASP A 266 SHEET 3 AA3 3 GLY A 475 GLY A 478 -1 O SER A 477 N ILE A 272 SHEET 1 AA4 2 THR B 210 ILE B 212 0 SHEET 2 AA4 2 LEU B 215 PHE B 217 -1 O LEU B 215 N ILE B 212 SHEET 1 AA5 9 PHE B 221 VAL B 223 0 SHEET 2 AA5 9 PHE B 244 ILE B 250 1 O GLU B 246 N VAL B 223 SHEET 3 AA5 9 ILE B 307 ILE B 312 1 O SER B 311 N ILE B 247 SHEET 4 AA5 9 TYR B 338 ASN B 342 1 O ALA B 340 N ILE B 312 SHEET 5 AA5 9 LEU B 425 LEU B 430 1 O PHE B 427 N ILE B 339 SHEET 6 AA5 9 GLY B 453 ILE B 456 1 O ILE B 455 N VAL B 428 SHEET 7 AA5 9 ILE B 502 SER B 505 1 O SER B 505 N ILE B 456 SHEET 8 AA5 9 ALA B 522 LEU B 527 1 O VAL B 524 N ALA B 504 SHEET 9 AA5 9 PHE B 221 VAL B 223 1 N GLY B 222 O LEU B 527 SHEET 1 AA6 3 ILE B 263 ASP B 266 0 SHEET 2 AA6 3 SER B 271 ASN B 274 -1 O SER B 271 N ASP B 266 SHEET 3 AA6 3 GLY B 475 GLY B 478 -1 O SER B 477 N ILE B 272 SHEET 1 AA7 2 THR C 210 ILE C 212 0 SHEET 2 AA7 2 LEU C 215 PHE C 217 -1 O LEU C 215 N ILE C 212 SHEET 1 AA8 9 PHE C 221 VAL C 223 0 SHEET 2 AA8 9 PHE C 244 ILE C 250 1 O GLU C 246 N VAL C 223 SHEET 3 AA8 9 ILE C 307 ILE C 312 1 O GLY C 309 N ILE C 247 SHEET 4 AA8 9 TYR C 338 ASN C 342 1 O ALA C 340 N VAL C 310 SHEET 5 AA8 9 LEU C 425 LEU C 430 1 O PHE C 427 N ILE C 339 SHEET 6 AA8 9 GLY C 453 ILE C 456 1 O ILE C 455 N VAL C 428 SHEET 7 AA8 9 ILE C 502 SER C 505 1 O ILE C 503 N ILE C 456 SHEET 8 AA8 9 ALA C 522 LEU C 527 1 O SER C 523 N ILE C 502 SHEET 9 AA8 9 PHE C 221 VAL C 223 1 N GLY C 222 O LEU C 527 SHEET 1 AA9 3 ILE C 263 ASP C 266 0 SHEET 2 AA9 3 SER C 271 ASN C 274 -1 O SER C 271 N ASP C 266 SHEET 3 AA9 3 GLY C 475 GLY C 478 -1 O SER C 477 N ILE C 272 SHEET 1 AB1 2 THR D 210 ILE D 212 0 SHEET 2 AB1 2 LEU D 215 PHE D 217 -1 O PHE D 217 N THR D 210 SHEET 1 AB2 9 PHE D 221 VAL D 223 0 SHEET 2 AB2 9 PHE D 244 ILE D 250 1 O GLU D 246 N VAL D 223 SHEET 3 AB2 9 ILE D 307 ILE D 312 1 O GLY D 309 N ILE D 247 SHEET 4 AB2 9 TYR D 338 ASN D 342 1 O ALA D 340 N VAL D 310 SHEET 5 AB2 9 LEU D 425 LEU D 430 1 O PHE D 427 N ILE D 339 SHEET 6 AB2 9 GLY D 453 ILE D 456 1 O ILE D 455 N VAL D 428 SHEET 7 AB2 9 ILE D 502 SER D 505 1 O ILE D 503 N MET D 454 SHEET 8 AB2 9 ALA D 522 LEU D 527 1 O GLN D 526 N ALA D 504 SHEET 9 AB2 9 PHE D 221 VAL D 223 1 N GLY D 222 O CYS D 525 SHEET 1 AB3 3 ILE D 263 ASP D 266 0 SHEET 2 AB3 3 SER D 271 ASN D 274 -1 O ILE D 273 N PHE D 264 SHEET 3 AB3 3 GLY D 475 GLY D 478 -1 O SER D 477 N ILE D 272 CISPEP 1 GLY A 248 THR A 249 0 8.94 CISPEP 2 LYS A 260 PRO A 261 0 3.47 CISPEP 3 ILE A 456 SER A 457 0 7.35 CISPEP 4 GLY B 248 THR B 249 0 6.53 CISPEP 5 LYS B 260 PRO B 261 0 2.98 CISPEP 6 ILE B 456 SER B 457 0 8.28 CISPEP 7 GLY C 248 THR C 249 0 4.68 CISPEP 8 LYS C 260 PRO C 261 0 -12.52 CISPEP 9 ILE C 456 SER C 457 0 6.86 CISPEP 10 GLY D 248 THR D 249 0 9.62 CISPEP 11 LYS D 260 PRO D 261 0 -10.71 CISPEP 12 ILE D 456 SER D 457 0 9.94 SITE 1 AC1 14 TYR A 168 PHE A 171 GLY A 181 CYS A 184 SITE 2 AC1 14 HIS A 185 LEU A 187 PHE A 188 LEU A 191 SITE 3 AC1 14 PHE A 227 ILE A 263 ARG A 265 LEU A 531 SITE 4 AC1 14 VAL A 532 MET A 536 SITE 1 AC2 22 ALA A 224 ALA A 225 GLY A 226 LYS A 229 SITE 2 AC2 22 THR A 249 ASN A 274 ASN A 342 LYS A 429 SITE 3 AC2 22 SER A 457 ASN A 458 SER A 477 GLY A 478 SITE 4 AC2 22 SER A 505 GLY A 506 GLY A 507 TYR A 528 SITE 5 AC2 22 SER A 529 ORO A1003 HOH A1135 HOH A1145 SITE 6 AC2 22 HOH A1170 HOH A1201 SITE 1 AC3 11 LYS A 229 ASN A 274 CYS A 276 GLY A 277 SITE 2 AC3 11 PHE A 278 ASN A 342 SER A 345 ASN A 347 SITE 3 AC3 11 ASN A 458 THR A 459 FMN A1002 SITE 1 AC4 15 TYR B 168 PHE B 171 CYS B 175 GLY B 181 SITE 2 AC4 15 CYS B 184 HIS B 185 LEU B 187 PHE B 188 SITE 3 AC4 15 LEU B 191 PHE B 227 ILE B 263 ARG B 265 SITE 4 AC4 15 LEU B 531 VAL B 532 MET B 536 SITE 1 AC5 21 ALA B 224 ALA B 225 GLY B 226 THR B 249 SITE 2 AC5 21 ASN B 274 ASN B 342 LYS B 429 SER B 457 SITE 3 AC5 21 ASN B 458 SER B 477 GLY B 478 SER B 505 SITE 4 AC5 21 GLY B 506 GLY B 507 TYR B 528 SER B 529 SITE 5 AC5 21 ORO B1003 HOH B1115 HOH B1123 HOH B1138 SITE 6 AC5 21 HOH B1186 SITE 1 AC6 10 ASN B 274 CYS B 276 GLY B 277 PHE B 278 SITE 2 AC6 10 ASN B 342 SER B 345 ASN B 347 ASN B 458 SITE 3 AC6 10 THR B 459 FMN B1002 SITE 1 AC7 14 TYR C 168 PHE C 171 CYS C 175 GLY C 181 SITE 2 AC7 14 CYS C 184 HIS C 185 LEU C 187 PHE C 188 SITE 3 AC7 14 LEU C 191 PHE C 227 ILE C 263 ARG C 265 SITE 4 AC7 14 LEU C 531 VAL C 532 SITE 1 AC8 21 ALA C 224 ALA C 225 GLY C 226 LYS C 229 SITE 2 AC8 21 THR C 249 ASN C 274 ASN C 342 LYS C 429 SITE 3 AC8 21 SER C 457 SER C 477 GLY C 478 SER C 505 SITE 4 AC8 21 GLY C 506 GLY C 507 TYR C 528 SER C 529 SITE 5 AC8 21 ORO C1003 HOH C1132 HOH C1135 HOH C1136 SITE 6 AC8 21 HOH C1210 SITE 1 AC9 11 LYS C 229 ASN C 274 CYS C 276 GLY C 277 SITE 2 AC9 11 PHE C 278 ASN C 342 SER C 345 ASN C 347 SITE 3 AC9 11 ASN C 458 THR C 459 FMN C1002 SITE 1 AD1 15 TYR D 168 PHE D 171 CYS D 175 GLY D 181 SITE 2 AD1 15 CYS D 184 HIS D 185 LEU D 187 PHE D 188 SITE 3 AD1 15 LEU D 191 PHE D 227 ILE D 263 ARG D 265 SITE 4 AD1 15 LEU D 531 VAL D 532 MET D 536 SITE 1 AD2 21 ALA D 224 ALA D 225 GLY D 226 THR D 249 SITE 2 AD2 21 ASN D 274 ASN D 342 LYS D 429 SER D 457 SITE 3 AD2 21 ASN D 458 SER D 477 GLY D 478 SER D 505 SITE 4 AD2 21 GLY D 506 GLY D 507 TYR D 528 SER D 529 SITE 5 AD2 21 ORO D1003 HOH D1114 HOH D1115 HOH D1131 SITE 6 AD2 21 HOH D1165 SITE 1 AD3 10 ASN D 274 CYS D 276 GLY D 277 PHE D 278 SITE 2 AD3 10 ASN D 342 SER D 345 ASN D 347 ASN D 458 SITE 3 AD3 10 THR D 459 FMN D1002 CRYST1 92.088 97.521 186.252 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010859 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010254 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005369 0.00000