HEADER TRANSFERASE 20-FEB-20 6VWO TITLE CRYSTAL STRUCTURE OF E. COLI GUANOSINE KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSINE-GUANOSINE KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.1.73; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: GSK, B0477, JW0466; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GUANOSINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.WANG,R.A.GRANT,M.T.LAUB REVDAT 4 03-APR-24 6VWO 1 REMARK REVDAT 3 06-MAR-24 6VWO 1 REMARK REVDAT 2 14-OCT-20 6VWO 1 JRNL REVDAT 1 07-OCT-20 6VWO 0 JRNL AUTH B.WANG,R.A.GRANT,M.T.LAUB JRNL TITL PPGPP COORDINATES NUCLEOTIDE AND AMINO-ACID SYNTHESIS IN E. JRNL TITL 2 COLI DURING STARVATION. JRNL REF MOL.CELL V. 80 29 2020 JRNL REFN ISSN 1097-2765 JRNL PMID 32857952 JRNL DOI 10.1016/J.MOLCEL.2020.08.005 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 55093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.700 REMARK 3 FREE R VALUE TEST SET COUNT : 4244 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5000 - 5.5400 1.00 1900 163 0.1793 0.1836 REMARK 3 2 5.5400 - 4.4000 1.00 1824 154 0.1349 0.1510 REMARK 3 3 4.4000 - 3.8400 1.00 1826 153 0.1368 0.1512 REMARK 3 4 3.8400 - 3.4900 1.00 1794 143 0.1712 0.1902 REMARK 3 5 3.4900 - 3.2400 1.00 1812 148 0.1743 0.2291 REMARK 3 6 3.2400 - 3.0500 1.00 1796 153 0.1872 0.2121 REMARK 3 7 3.0500 - 2.9000 1.00 1783 144 0.1909 0.2132 REMARK 3 8 2.9000 - 2.7700 1.00 1785 151 0.1910 0.2333 REMARK 3 9 2.7700 - 2.6600 1.00 1802 145 0.1800 0.1909 REMARK 3 10 2.6600 - 2.5700 1.00 1768 149 0.1833 0.2127 REMARK 3 11 2.5700 - 2.4900 1.00 1793 157 0.1888 0.2044 REMARK 3 12 2.4900 - 2.4200 1.00 1763 147 0.1783 0.2259 REMARK 3 13 2.4200 - 2.3600 1.00 1794 152 0.1876 0.2416 REMARK 3 14 2.3600 - 2.3000 1.00 1746 143 0.1953 0.2185 REMARK 3 15 2.3000 - 2.2500 1.00 1785 150 0.1917 0.2537 REMARK 3 16 2.2500 - 2.2000 1.00 1778 149 0.1941 0.2183 REMARK 3 17 2.2000 - 2.1600 1.00 1726 141 0.1929 0.2240 REMARK 3 18 2.1600 - 2.1100 1.00 1809 151 0.2015 0.2140 REMARK 3 19 2.1100 - 2.0800 1.00 1792 145 0.2098 0.2400 REMARK 3 20 2.0800 - 2.0400 1.00 1757 146 0.2138 0.2771 REMARK 3 21 2.0400 - 2.0100 1.00 1763 148 0.2113 0.2181 REMARK 3 22 2.0100 - 1.9800 1.00 1770 151 0.2368 0.2402 REMARK 3 23 1.9800 - 1.9500 1.00 1755 144 0.2481 0.3028 REMARK 3 24 1.9500 - 1.9200 1.00 1777 145 0.2560 0.2964 REMARK 3 25 1.9200 - 1.9000 0.99 1720 145 0.2848 0.3226 REMARK 3 26 1.9000 - 1.8700 0.92 1637 139 0.2899 0.3547 REMARK 3 27 1.8700 - 1.8500 0.83 1458 121 0.3085 0.3658 REMARK 3 28 1.8500 - 1.8300 0.69 1236 100 0.3159 0.3154 REMARK 3 29 1.8300 - 1.8000 0.58 1044 92 0.3154 0.3170 REMARK 3 30 1.8000 - 1.7800 0.49 856 75 0.3307 0.3226 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VWO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000247188. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55162 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 16.60 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.89600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ENSEMBLE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.9, 15% PEG-4000, 0.2M REMARK 280 CACL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.29800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.14900 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.14900 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.29800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 75.44700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A 504 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 760 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 773 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 PHE A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 LYS A 6 REMARK 465 ARG A 7 REMARK 465 LYS A 8 REMARK 465 SER A 9 REMARK 465 LYS A 10 REMARK 465 HIS A 11 REMARK 465 TYR A 12 REMARK 465 PHE A 13 REMARK 465 PRO A 14 REMARK 465 VAL A 15 REMARK 465 ASN A 16 REMARK 465 ALA A 17 REMARK 465 ARG A 18 REMARK 465 ASP A 19 REMARK 465 PRO A 20 REMARK 465 LEU A 21 REMARK 465 LEU A 22 REMARK 465 GLN A 23 REMARK 465 GLN A 24 REMARK 465 PHE A 25 REMARK 465 GLN A 26 REMARK 465 PRO A 27 REMARK 465 GLU A 28 REMARK 465 ASN A 29 REMARK 465 GLU A 30 REMARK 465 THR A 31 REMARK 465 SER A 32 REMARK 465 PRO A 379 REMARK 465 ASN A 380 REMARK 465 SER A 381 REMARK 465 SER A 382 REMARK 465 LYS A 383 REMARK 465 HIS A 384 REMARK 465 GLU A 422 REMARK 465 ARG A 423 REMARK 465 GLU A 424 REMARK 465 ASP A 425 REMARK 465 SER A 426 REMARK 465 LEU A 427 REMARK 465 GLU A 428 REMARK 465 GLU A 429 REMARK 465 SER A 430 REMARK 465 TYR A 431 REMARK 465 TRP A 432 REMARK 465 ASP A 433 REMARK 465 ARG A 434 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 146 35.22 -94.09 REMARK 500 THR A 229 140.06 85.38 REMARK 500 ASN A 236 71.78 -164.45 REMARK 500 ASN A 377 51.95 -96.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 504 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 130 O REMARK 620 2 LEU A 130 O 0.0 REMARK 620 3 CYS A 131 O 76.3 76.3 REMARK 620 4 CYS A 131 O 76.3 76.3 0.0 REMARK 620 5 THR A 133 O 89.4 89.4 89.7 89.7 REMARK 620 6 THR A 133 O 89.4 89.4 89.7 89.7 0.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 505 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 227 O REMARK 620 2 GLU A 257 OE1 83.1 REMARK 620 3 GLU A 257 OE2 76.5 50.5 REMARK 620 4 HOH A 608 O 164.0 109.7 103.9 REMARK 620 5 HOH A 661 O 75.6 144.1 144.7 97.3 REMARK 620 6 HOH A 772 O 106.1 76.9 127.0 86.6 81.7 REMARK 620 7 HOH A 776 O 87.7 133.7 83.3 76.5 74.5 148.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 506 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 352 O REMARK 620 2 ASN A 354 O 96.6 REMARK 620 3 VAL A 408 O 81.1 111.8 REMARK 620 4 GLN A 411 O 83.2 176.8 71.3 REMARK 620 5 HIS A 412 O 113.6 104.6 138.9 72.8 REMARK 620 6 SER A 413 O 171.7 90.2 91.9 90.3 69.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 507 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 501 O3B REMARK 620 2 ADP A 501 O2A 73.4 REMARK 620 3 HOH A 607 O 63.4 114.3 REMARK 620 4 HOH A 765 O 136.7 140.6 75.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GMP A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GMP A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 507 DBREF 6VWO A 1 434 UNP P0AEW6 INGK_ECOLI 1 434 SEQADV 6VWO GLY A -2 UNP P0AEW6 EXPRESSION TAG SEQADV 6VWO SER A -1 UNP P0AEW6 EXPRESSION TAG SEQADV 6VWO HIS A 0 UNP P0AEW6 EXPRESSION TAG SEQRES 1 A 437 GLY SER HIS MET LYS PHE PRO GLY LYS ARG LYS SER LYS SEQRES 2 A 437 HIS TYR PHE PRO VAL ASN ALA ARG ASP PRO LEU LEU GLN SEQRES 3 A 437 GLN PHE GLN PRO GLU ASN GLU THR SER ALA ALA TRP VAL SEQRES 4 A 437 VAL GLY ILE ASP GLN THR LEU VAL ASP ILE GLU ALA LYS SEQRES 5 A 437 VAL ASP ASP GLU PHE ILE GLU ARG TYR GLY LEU SER ALA SEQRES 6 A 437 GLY HIS SER LEU VAL ILE GLU ASP ASP VAL ALA GLU ALA SEQRES 7 A 437 LEU TYR GLN GLU LEU LYS GLN LYS ASN LEU ILE THR HIS SEQRES 8 A 437 GLN PHE ALA GLY GLY THR ILE GLY ASN THR MET HIS ASN SEQRES 9 A 437 TYR SER VAL LEU ALA ASP ASP ARG SER VAL LEU LEU GLY SEQRES 10 A 437 VAL MET CYS SER ASN ILE GLU ILE GLY SER TYR ALA TYR SEQRES 11 A 437 ARG TYR LEU CYS ASN THR SER SER ARG THR ASP LEU ASN SEQRES 12 A 437 TYR LEU GLN GLY VAL ASP GLY PRO ILE GLY ARG CYS PHE SEQRES 13 A 437 THR LEU ILE GLY GLU SER GLY GLU ARG THR PHE ALA ILE SEQRES 14 A 437 SER PRO GLY HIS MET ASN GLN LEU ARG ALA GLU SER ILE SEQRES 15 A 437 PRO GLU ASP VAL ILE ALA GLY ALA SER ALA LEU VAL LEU SEQRES 16 A 437 THR SER TYR LEU VAL ARG CYS LYS PRO GLY GLU PRO MET SEQRES 17 A 437 PRO GLU ALA THR MET LYS ALA ILE GLU TYR ALA LYS LYS SEQRES 18 A 437 TYR ASN VAL PRO VAL VAL LEU THR LEU GLY THR LYS PHE SEQRES 19 A 437 VAL ILE ALA GLU ASN PRO GLN TRP TRP GLN GLN PHE LEU SEQRES 20 A 437 LYS ASP HIS VAL SER ILE LEU ALA MET ASN GLU ASP GLU SEQRES 21 A 437 ALA GLU ALA LEU THR GLY GLU SER ASP PRO LEU LEU ALA SEQRES 22 A 437 SER ASP LYS ALA LEU ASP TRP VAL ASP LEU VAL LEU CYS SEQRES 23 A 437 THR ALA GLY PRO ILE GLY LEU TYR MET ALA GLY PHE THR SEQRES 24 A 437 GLU ASP GLU ALA LYS ARG LYS THR GLN HIS PRO LEU LEU SEQRES 25 A 437 PRO GLY ALA ILE ALA GLU PHE ASN GLN TYR GLU PHE SER SEQRES 26 A 437 ARG ALA MET ARG HIS LYS ASP CYS GLN ASN PRO LEU ARG SEQRES 27 A 437 VAL TYR SER HIS ILE ALA PRO TYR MET GLY GLY PRO GLU SEQRES 28 A 437 LYS ILE MET ASN THR ASN GLY ALA GLY ASP GLY ALA LEU SEQRES 29 A 437 ALA ALA LEU LEU HIS ASP ILE THR ALA ASN SER TYR HIS SEQRES 30 A 437 ARG SER ASN VAL PRO ASN SER SER LYS HIS LYS PHE THR SEQRES 31 A 437 TRP LEU THR TYR SER SER LEU ALA GLN VAL CYS LYS TYR SEQRES 32 A 437 ALA ASN ARG VAL SER TYR GLN VAL LEU ASN GLN HIS SER SEQRES 33 A 437 PRO ARG LEU THR ARG GLY LEU PRO GLU ARG GLU ASP SER SEQRES 34 A 437 LEU GLU GLU SER TYR TRP ASP ARG HET ADP A 501 38 HET GMP A 502 33 HET GMP A 503 33 HET K A 504 1 HET K A 505 1 HET K A 506 1 HET MG A 507 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM GMP GUANOSINE HETNAM K POTASSIUM ION HETNAM MG MAGNESIUM ION FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 GMP 2(C10 H13 N5 O5) FORMUL 5 K 3(K 1+) FORMUL 8 MG MG 2+ FORMUL 9 HOH *204(H2 O) HELIX 1 AA1 ASP A 51 TYR A 58 1 8 HELIX 2 AA2 GLU A 69 LYS A 83 1 15 HELIX 3 AA3 GLY A 93 ASP A 107 1 15 HELIX 4 AA4 SER A 124 THR A 133 1 10 HELIX 5 AA5 ARG A 175 ILE A 179 5 5 HELIX 6 AA6 PRO A 180 GLY A 186 1 7 HELIX 7 AA7 TYR A 195 ARG A 198 5 4 HELIX 8 AA8 PRO A 204 TYR A 219 1 16 HELIX 9 AA9 THR A 229 ALA A 234 1 6 HELIX 10 AB1 ASN A 236 VAL A 248 1 13 HELIX 11 AB2 GLU A 255 GLY A 263 1 9 HELIX 12 AB3 ASP A 266 LEU A 275 1 10 HELIX 13 AB4 GLY A 286 ILE A 288 5 3 HELIX 14 AB5 GLU A 299 LYS A 301 5 3 HELIX 15 AB6 ARG A 326 CYS A 330 5 5 HELIX 16 AB7 GLY A 355 ASN A 377 1 23 HELIX 17 AB8 SER A 393 ASN A 410 1 18 SHEET 1 AA1 9 THR A 137 ASP A 138 0 SHEET 2 AA1 9 SER A 110 LEU A 113 1 N SER A 110 O ASP A 138 SHEET 3 AA1 9 VAL A 36 ILE A 39 1 N GLY A 38 O LEU A 113 SHEET 4 AA1 9 LEU A 190 THR A 193 1 O VAL A 191 N VAL A 37 SHEET 5 AA1 9 VAL A 223 THR A 226 1 O VAL A 224 N LEU A 190 SHEET 6 AA1 9 ILE A 250 ASN A 254 1 O ILE A 250 N LEU A 225 SHEET 7 AA1 9 LEU A 280 THR A 284 1 O LEU A 282 N LEU A 251 SHEET 8 AA1 9 LEU A 290 GLU A 297 -1 O ALA A 293 N VAL A 281 SHEET 9 AA1 9 PRO A 333 ILE A 340 -1 O LEU A 334 N THR A 296 SHEET 1 AA2 5 SER A 65 VAL A 67 0 SHEET 2 AA2 5 ARG A 162 SER A 167 1 O ILE A 166 N LEU A 66 SHEET 3 AA2 5 GLY A 150 ILE A 156 -1 N LEU A 155 O THR A 163 SHEET 4 AA2 5 LEU A 43 LYS A 49 1 N ILE A 46 O CYS A 152 SHEET 5 AA2 5 ILE A 86 ALA A 91 -1 O PHE A 90 N ASP A 45 SHEET 1 AA3 2 VAL A 115 CYS A 117 0 SHEET 2 AA3 2 GLN A 143 VAL A 145 1 O GLN A 143 N MET A 116 LINK O LEU A 130 K K A 504 1555 1555 2.85 LINK O LEU A 130 K K A 504 1555 4556 2.85 LINK O CYS A 131 K K A 504 1555 1555 2.75 LINK O CYS A 131 K K A 504 1555 4556 2.75 LINK O THR A 133 K K A 504 1555 1555 2.64 LINK O THR A 133 K K A 504 1555 4556 2.64 LINK O LEU A 227 K K A 505 1555 1555 2.37 LINK OE1 GLU A 257 K K A 505 1555 1555 2.68 LINK OE2 GLU A 257 K K A 505 1555 1555 2.49 LINK O ASN A 352 K K A 506 1555 1555 2.82 LINK O ASN A 354 K K A 506 1555 1555 2.81 LINK O VAL A 408 K K A 506 1555 1555 2.74 LINK O GLN A 411 K K A 506 1555 1555 2.74 LINK O HIS A 412 K K A 506 1555 1555 3.25 LINK O SER A 413 K K A 506 1555 1555 2.96 LINK O3B ADP A 501 MG MG A 507 1555 1555 2.50 LINK O2A ADP A 501 MG MG A 507 1555 1555 2.33 LINK K K A 505 O HOH A 608 1555 1555 2.45 LINK K K A 505 O HOH A 661 1555 1555 2.48 LINK K K A 505 O HOH A 772 1555 1555 2.42 LINK K K A 505 O HOH A 776 1555 1555 2.58 LINK MG MG A 507 O HOH A 607 1555 1555 2.10 LINK MG MG A 507 O HOH A 765 1555 3665 2.35 SITE 1 AC1 26 ASN A 236 GLN A 238 ASN A 254 THR A 284 SITE 2 AC1 26 ALA A 285 GLY A 286 GLY A 289 LEU A 290 SITE 3 AC1 26 PRO A 342 MET A 344 ILE A 350 ALA A 356 SITE 4 AC1 26 GLY A 357 ASN A 402 SER A 405 LEU A 409 SITE 5 AC1 26 MG A 507 HOH A 607 HOH A 608 HOH A 639 SITE 6 AC1 26 HOH A 651 HOH A 685 HOH A 706 HOH A 712 SITE 7 AC1 26 HOH A 723 HOH A 768 SITE 1 AC2 18 ASP A 40 GLN A 41 LEU A 43 ASP A 45 SITE 2 AC2 18 SER A 65 GLY A 93 THR A 94 ASN A 97 SITE 3 AC2 18 CYS A 152 ILE A 166 TYR A 195 ARG A 198 SITE 4 AC2 18 ASN A 354 ASP A 358 HOH A 638 HOH A 653 SITE 5 AC2 18 HOH A 700 HOH A 742 SITE 1 AC3 8 GLU A 53 LEU A 275 ASP A 276 TRP A 277 SITE 2 AC3 8 VAL A 278 HIS A 327 ARG A 335 HOH A 657 SITE 1 AC4 3 LEU A 130 CYS A 131 THR A 133 SITE 1 AC5 6 LEU A 227 GLU A 257 HOH A 608 HOH A 661 SITE 2 AC5 6 HOH A 772 HOH A 776 SITE 1 AC6 6 ASN A 352 ASN A 354 VAL A 408 GLN A 411 SITE 2 AC6 6 HIS A 412 SER A 413 SITE 1 AC7 3 ADP A 501 HOH A 607 HOH A 765 CRYST1 118.117 118.117 75.447 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008466 0.004888 0.000000 0.00000 SCALE2 0.000000 0.009776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013254 0.00000