HEADER VIRUS 28-FEB-20 6VZP TITLE HBV WILD TYPE CAPSID COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CORE ANTIGEN,CORE PROTEIN,HBCAG,P21.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS B VIRUS GENOTYPE D SUBTYPE ADW SOURCE 3 (ISOLATE UNITED KINGDOM/ADYW/1979); SOURCE 4 ORGANISM_COMMON: HBV-D; SOURCE 5 ORGANISM_TAXID: 10419; SOURCE 6 STRAIN: ISOLATE UNITED KINGDOM/ADYW/1979; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HBV, CORE PROTEIN, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR Z.ZHAO,J.WANG,A.ZLOTNICK REVDAT 3 06-NOV-24 6VZP 1 REMARK REVDAT 2 30-DEC-20 6VZP 1 JRNL REVDAT 1 30-SEP-20 6VZP 0 JRNL AUTH Z.ZHAO,J.C.WANG,C.P.SEGURA,J.A.HADDEN-PERILLA,A.ZLOTNICK JRNL TITL THE INTEGRITY OF THE INTRADIMER INTERFACE OF THE HEPATITIS B JRNL TITL 2 VIRUS CAPSID PROTEIN DIMER REGULATES CAPSID SELF-ASSEMBLY. JRNL REF ACS CHEM.BIOL. V. 15 3124 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 32459465 JRNL DOI 10.1021/ACSCHEMBIO.0C00277 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.600 REMARK 3 NUMBER OF PARTICLES : 139740 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6VZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247379. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HBV WILD TYPE CAPSID REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 15.00 REMARK 245 SAMPLE SUPPORT DETAILS : UNSPECIFIED REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309020 0.495982 -0.811485 241.59963 REMARK 350 BIOMT2 2 -0.498609 0.811074 0.305857 91.49958 REMARK 350 BIOMT3 2 0.809874 0.310098 0.497939 -148.13030 REMARK 350 BIOMT1 3 -0.809008 0.303907 -0.503136 481.84654 REMARK 350 BIOMT2 3 -0.310784 0.505386 0.804984 -0.05779 REMARK 350 BIOMT3 3 0.498918 0.807605 -0.314412 2.14881 REMARK 350 BIOMT1 4 -0.809008 -0.310784 0.498918 388.72767 REMARK 350 BIOMT2 4 0.303907 0.505386 0.807605 -148.14292 REMARK 350 BIOMT3 4 -0.503136 0.804984 -0.314412 243.15671 REMARK 350 BIOMT1 5 0.309020 -0.498609 0.809874 90.93013 REMARK 350 BIOMT2 5 0.495982 0.811074 0.310098 -148.10721 REMARK 350 BIOMT3 5 -0.811485 0.305857 0.497939 241.82867 REMARK 350 BIOMT1 6 -0.496852 -0.812157 -0.305843 627.28694 REMARK 350 BIOMT2 6 -0.812157 0.310942 0.493676 241.58279 REMARK 350 BIOMT3 6 -0.305843 0.493676 -0.814091 390.44624 REMARK 350 BIOMT1 7 0.003717 -0.999990 0.002493 478.24037 REMARK 350 BIOMT2 7 -0.006196 0.002470 0.999978 0.68872 REMARK 350 BIOMT3 7 -0.999974 -0.003732 -0.006187 482.31736 REMARK 350 BIOMT1 8 0.501771 -0.808449 -0.307628 387.27037 REMARK 350 BIOMT2 8 0.806710 0.309021 0.503712 -148.70922 REMARK 350 BIOMT3 8 -0.312162 -0.500915 0.807242 241.29899 REMARK 350 BIOMT1 9 0.309017 -0.502238 -0.807630 480.09439 REMARK 350 BIOMT2 9 0.503152 0.806952 -0.309299 -0.14814 REMARK 350 BIOMT3 9 0.807060 -0.310782 0.502064 0.47032 REMARK 350 BIOMT1 10 -0.308166 -0.504529 -0.806526 628.43279 REMARK 350 BIOMT2 10 -0.497362 0.808140 -0.315501 241.06559 REMARK 350 BIOMT3 10 0.810965 0.303909 -0.499974 92.64839 REMARK 350 BIOMT1 11 0.303528 0.502765 0.809381 -147.81010 REMARK 350 BIOMT2 11 0.502765 -0.806085 0.312175 237.63701 REMARK 350 BIOMT3 11 0.809381 0.312175 -0.497443 90.43815 REMARK 350 BIOMT1 12 0.498610 0.809312 0.310488 -148.36889 REMARK 350 BIOMT2 12 0.810108 -0.307628 -0.499089 239.10590 REMARK 350 BIOMT3 12 -0.308404 0.500380 -0.809016 388.23450 REMARK 350 BIOMT1 13 0.002007 0.999995 -0.002477 0.15396 REMARK 350 BIOMT2 13 -0.000473 -0.002476 -0.999997 480.61017 REMARK 350 BIOMT3 13 -0.999998 0.002009 0.000468 479.34867 REMARK 350 BIOMT1 14 -0.499992 0.811298 0.302993 92.50492 REMARK 350 BIOMT2 14 -0.808783 -0.312339 -0.498311 628.39913 REMARK 350 BIOMT3 14 -0.309642 -0.494207 0.812331 237.86396 REMARK 350 BIOMT1 15 -0.313642 0.503993 0.804748 1.05811 REMARK 350 BIOMT2 15 -0.497765 -0.808997 0.312656 478.23346 REMARK 350 BIOMT3 15 0.808616 -0.302513 0.504605 -2.49596 REMARK 350 BIOMT1 16 -0.806676 0.309391 -0.503538 480.06830 REMARK 350 BIOMT2 16 0.309391 -0.504857 -0.805851 480.16636 REMARK 350 BIOMT3 16 -0.503538 -0.805851 0.311533 479.34387 REMARK 350 BIOMT1 17 -0.811347 -0.305304 0.498504 388.07404 REMARK 350 BIOMT2 17 -0.305304 -0.505916 -0.806745 628.09197 REMARK 350 BIOMT3 17 0.498504 -0.806745 0.317263 237.80669 REMARK 350 BIOMT1 18 0.305229 -0.495453 0.813241 90.27428 REMARK 350 BIOMT2 18 -0.495453 -0.811931 -0.308699 627.54300 REMARK 350 BIOMT3 18 0.813241 -0.308699 -0.493299 237.43178 REMARK 350 BIOMT1 19 0.999982 0.001723 0.005718 -1.78184 REMARK 350 BIOMT2 19 0.001723 -0.999999 0.000005 479.27810 REMARK 350 BIOMT3 19 0.005718 0.000005 -0.999984 478.73726 REMARK 350 BIOMT1 20 0.312787 0.499144 -0.808096 239.12412 REMARK 350 BIOMT2 20 0.499145 -0.810217 -0.307252 388.19433 REMARK 350 BIOMT3 20 -0.808096 -0.307252 -0.502570 628.24715 REMARK 350 BIOMT1 21 -0.309870 0.497227 -0.810398 389.50347 REMARK 350 BIOMT2 21 0.500860 0.809863 0.305387 -147.85595 REMARK 350 BIOMT3 21 0.808159 -0.311266 -0.499993 240.87388 REMARK 350 BIOMT1 22 -0.999999 -0.001704 0.000006 480.17966 REMARK 350 BIOMT2 22 -0.001704 0.999976 -0.006674 2.01671 REMARK 350 BIOMT3 22 0.000006 -0.006674 -0.999978 481.70817 REMARK 350 BIOMT1 23 -0.308166 -0.497362 0.810965 238.42358 REMARK 350 BIOMT2 23 -0.504529 0.808140 0.303909 94.09097 REMARK 350 BIOMT3 23 -0.806526 -0.315501 -0.499974 629.22587 REMARK 350 BIOMT1 24 0.809539 -0.304764 0.501762 -1.66607 REMARK 350 BIOMT2 24 -0.312727 0.499466 0.807921 1.12333 REMARK 350 BIOMT3 24 -0.496838 -0.810958 0.309029 479.56254 REMARK 350 BIOMT1 25 0.808486 0.309926 -0.500296 91.70643 REMARK 350 BIOMT2 25 0.308637 0.500531 0.808834 -148.40809 REMARK 350 BIOMT3 25 0.501092 -0.808341 0.309017 239.54781 REMARK 350 BIOMT1 26 -0.002012 0.006197 0.999979 -1.16938 REMARK 350 BIOMT2 26 -0.999989 -0.004193 -0.001986 481.21286 REMARK 350 BIOMT3 26 0.004181 -0.999972 0.006206 477.40417 REMARK 350 BIOMT1 27 0.806145 0.314119 0.501457 -149.21565 REMARK 350 BIOMT2 27 -0.308535 -0.499994 0.809205 239.52637 REMARK 350 BIOMT3 27 0.504913 -0.807053 -0.306151 385.99805 REMARK 350 BIOMT1 28 0.498610 0.810108 -0.308404 0.00941 REMARK 350 BIOMT2 28 0.809312 -0.307628 0.500380 -0.63252 REMARK 350 BIOMT3 28 0.310488 -0.499089 -0.809016 479.48993 REMARK 350 BIOMT1 29 -0.499614 0.808724 -0.310404 240.28184 REMARK 350 BIOMT2 29 0.808724 0.307062 -0.501675 92.62762 REMARK 350 BIOMT3 29 -0.310404 -0.501675 -0.807447 628.67721 REMARK 350 BIOMT1 30 -0.809016 0.311880 0.498221 239.55330 REMARK 350 BIOMT2 30 -0.309485 0.494595 -0.812155 390.42445 REMARK 350 BIOMT3 30 -0.499712 -0.811238 -0.303613 627.38815 REMARK 350 BIOMT1 31 -0.499987 -0.809586 0.307546 480.17405 REMARK 350 BIOMT2 31 0.806370 -0.305670 0.506293 -1.81596 REMARK 350 BIOMT3 31 -0.315880 0.501136 0.805657 2.23315 REMARK 350 BIOMT1 32 0.498234 -0.809249 0.311254 239.74387 REMARK 350 BIOMT2 32 0.811628 0.309024 -0.495745 90.03676 REMARK 350 BIOMT3 32 0.304997 0.499619 0.810776 -147.57188 REMARK 350 BIOMT1 33 0.809539 -0.312727 -0.496838 239.96483 REMARK 350 BIOMT2 33 -0.304764 0.499466 -0.810958 387.83636 REMARK 350 BIOMT3 33 0.501762 0.807921 0.309029 -148.27037 REMARK 350 BIOMT1 34 0.003717 -0.006196 -0.999974 480.53157 REMARK 350 BIOMT2 34 -0.999990 0.002470 -0.003732 480.03392 REMARK 350 BIOMT3 34 0.002493 0.999978 -0.006187 1.10297 REMARK 350 BIOMT1 35 -0.805615 -0.313271 -0.502838 628.98903 REMARK 350 BIOMT2 35 -0.313271 -0.495131 0.810374 239.21554 REMARK 350 BIOMT3 35 -0.502838 0.810374 0.300746 94.11925 REMARK 350 BIOMT1 36 0.811869 0.306161 -0.497126 91.03701 REMARK 350 BIOMT2 36 -0.307241 -0.500000 -0.809693 627.84521 REMARK 350 BIOMT3 36 -0.496459 0.810102 -0.311869 239.71705 REMARK 350 BIOMT1 37 -0.304380 0.496834 -0.812717 388.83727 REMARK 350 BIOMT2 37 -0.501389 -0.809007 -0.306785 627.80632 REMARK 350 BIOMT3 37 -0.809915 0.314108 0.495353 240.09391 REMARK 350 BIOMT1 38 -0.999984 -0.000019 -0.005724 481.14733 REMARK 350 BIOMT2 38 -0.000019 -0.999978 0.006669 478.09135 REMARK 350 BIOMT3 38 -0.005724 0.006669 0.999961 -0.21718 REMARK 350 BIOMT1 39 -0.313642 -0.497765 0.808616 240.39782 REMARK 350 BIOMT2 39 0.503993 -0.808997 -0.302513 385.60129 REMARK 350 BIOMT3 39 0.804748 0.312656 0.504605 -149.11447 REMARK 350 BIOMT1 40 0.806145 -0.308535 0.504913 -0.70362 REMARK 350 BIOMT2 40 0.314119 -0.499994 -0.807053 478.15427 REMARK 350 BIOMT3 40 0.501457 0.809205 -0.306151 -0.82696 REMARK 350 BIOMT1 41 -0.309870 0.500860 0.808159 0.08622 REMARK 350 BIOMT2 41 0.497227 0.809863 -0.311266 1.04716 REMARK 350 BIOMT3 41 -0.810398 0.305387 -0.499993 481.24158 REMARK 350 BIOMT1 42 0.309017 0.503152 0.807060 -148.66257 REMARK 350 BIOMT2 42 -0.502238 0.806952 -0.310782 241.38713 REMARK 350 BIOMT3 42 -0.807630 -0.309299 0.502064 387.45653 REMARK 350 BIOMT1 43 0.498234 0.811628 0.304997 -147.51591 REMARK 350 BIOMT2 43 -0.809249 0.309024 0.499619 239.91875 REMARK 350 BIOMT3 43 0.311254 -0.495745 0.810776 89.66185 REMARK 350 BIOMT1 44 -0.003712 0.999984 -0.004197 1.94155 REMARK 350 BIOMT2 44 0.000472 0.004199 0.999991 -1.32873 REMARK 350 BIOMT3 44 0.999993 0.003710 -0.000487 -0.60033 REMARK 350 BIOMT1 45 -0.503147 0.807919 0.306774 93.16468 REMARK 350 BIOMT2 45 0.807919 0.313735 0.498837 -148.95949 REMARK 350 BIOMT3 45 0.306774 0.498837 -0.810587 241.40926 REMARK 350 BIOMT1 46 -0.499987 0.806370 -0.315880 242.25038 REMARK 350 BIOMT2 46 -0.809586 -0.305670 0.501136 387.06784 REMARK 350 BIOMT3 46 0.307546 0.506293 0.805657 -148.55520 REMARK 350 BIOMT1 47 -0.812392 0.308088 0.495076 242.02774 REMARK 350 BIOMT2 47 0.308088 -0.494060 0.813011 89.27019 REMARK 350 BIOMT3 47 0.495076 0.813011 0.306453 -147.26885 REMARK 350 BIOMT1 48 -0.003712 0.000472 0.999993 0.60816 REMARK 350 BIOMT2 48 0.999984 0.004199 0.003710 -1.93371 REMARK 350 BIOMT3 48 -0.004197 0.999991 -0.000487 1.33657 REMARK 350 BIOMT1 49 0.808486 0.308637 0.501092 -148.37471 REMARK 350 BIOMT2 49 0.309926 0.500531 -0.808341 239.49682 REMARK 350 BIOMT3 49 -0.500296 0.808834 0.309017 91.89343 REMARK 350 BIOMT1 50 0.501771 0.806710 -0.312162 0.96840 REMARK 350 BIOMT2 50 -0.808449 0.309021 -0.500915 479.91300 REMARK 350 BIOMT3 50 -0.307628 0.503712 0.807242 -0.74478 REMARK 350 BIOMT1 51 0.811869 -0.307241 -0.496459 237.99928 REMARK 350 BIOMT2 51 0.306161 -0.500000 0.810102 91.85516 REMARK 350 BIOMT3 51 -0.497126 -0.809693 -0.311869 628.37932 REMARK 350 BIOMT1 52 0.002007 -0.000473 -0.999998 479.57481 REMARK 350 BIOMT2 52 0.999995 -0.002476 0.002009 0.07309 REMARK 350 BIOMT3 52 -0.002477 -0.999997 0.000468 480.38454 REMARK 350 BIOMT1 53 -0.809016 -0.309485 -0.499712 628.14648 REMARK 350 BIOMT2 53 0.311880 0.494595 -0.811238 241.14744 REMARK 350 BIOMT3 53 0.498221 -0.812155 -0.303613 388.21752 REMARK 350 BIOMT1 54 -0.500394 -0.807232 0.313020 478.39329 REMARK 350 BIOMT2 54 -0.807232 0.304277 -0.505758 481.92165 REMARK 350 BIOMT3 54 0.313020 -0.505758 -0.803882 479.24996 REMARK 350 BIOMT1 55 0.501368 -0.805845 0.315030 237.26906 REMARK 350 BIOMT2 55 -0.810767 -0.310416 0.496285 389.65394 REMARK 350 BIOMT3 55 -0.302138 -0.504237 -0.808985 627.67811 REMARK 350 BIOMT1 56 -0.002012 -0.999989 0.004181 479.20927 REMARK 350 BIOMT2 56 0.006197 -0.004193 -0.999972 479.41601 REMARK 350 BIOMT3 56 0.999979 -0.001986 0.006206 -0.83746 REMARK 350 BIOMT1 57 0.501368 -0.810767 -0.302138 386.60517 REMARK 350 BIOMT2 57 -0.805845 -0.310416 -0.504237 628.65575 REMARK 350 BIOMT3 57 0.315030 0.496285 -0.808985 239.65604 REMARK 350 BIOMT1 58 0.314494 -0.502615 -0.805277 478.30643 REMARK 350 BIOMT2 58 -0.502615 -0.807818 0.307909 480.25368 REMARK 350 BIOMT3 58 -0.805277 0.307909 -0.506676 481.01231 REMARK 350 BIOMT1 59 -0.304380 -0.501389 -0.809915 627.58502 REMARK 350 BIOMT2 59 0.496834 -0.809007 0.314108 239.29643 REMARK 350 BIOMT3 59 -0.812717 -0.306785 0.495353 389.68519 REMARK 350 BIOMT1 60 -0.499992 -0.808783 -0.309642 628.14301 REMARK 350 BIOMT2 60 0.811298 -0.312339 -0.494207 238.77872 REMARK 350 BIOMT3 60 0.302993 -0.498311 0.812331 91.88566 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 143 REMARK 465 PRO A 144 REMARK 465 GLU A 145 REMARK 465 THR A 146 REMARK 465 THR A 147 REMARK 465 VAL A 148 REMARK 465 VAL A 149 REMARK 465 LEU B 143 REMARK 465 PRO B 144 REMARK 465 GLU B 145 REMARK 465 THR B 146 REMARK 465 THR B 147 REMARK 465 VAL B 148 REMARK 465 VAL B 149 REMARK 465 LEU C 143 REMARK 465 PRO C 144 REMARK 465 GLU C 145 REMARK 465 THR C 146 REMARK 465 THR C 147 REMARK 465 VAL C 148 REMARK 465 VAL C 149 REMARK 465 LEU D 143 REMARK 465 PRO D 144 REMARK 465 GLU D 145 REMARK 465 THR D 146 REMARK 465 THR D 147 REMARK 465 VAL D 148 REMARK 465 VAL D 149 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 42 32.30 -94.16 REMARK 500 THR A 91 -61.53 -97.34 REMARK 500 ASP B 4 83.41 55.59 REMARK 500 SER B 21 47.59 -84.99 REMARK 500 PRO B 50 2.88 -65.71 REMARK 500 TYR C 38 66.02 -105.35 REMARK 500 GLU C 77 49.45 -93.32 REMARK 500 ALA C 131 75.88 -113.49 REMARK 500 TYR C 132 19.42 -144.95 REMARK 500 THR D 91 -50.45 -121.40 REMARK 500 TYR D 132 48.23 -98.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO C 129 PRO C 130 -149.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-21495 RELATED DB: EMDB REMARK 900 WILD TYPE HBV CAPSID REMARK 900 RELATED ID: EMD-21497 RELATED DB: EMDB REMARK 900 HBV D78S MUTANT CAPSID DBREF 6VZP A 1 149 UNP P03147 CAPSD_HBVD1 1 149 DBREF 6VZP B 1 149 UNP P03147 CAPSD_HBVD1 1 149 DBREF 6VZP C 1 149 UNP P03147 CAPSD_HBVD1 1 149 DBREF 6VZP D 1 149 UNP P03147 CAPSD_HBVD1 1 149 SEQRES 1 A 149 MET ASP ILE ASP PRO TYR LYS GLU PHE GLY ALA THR VAL SEQRES 2 A 149 GLU LEU LEU SER PHE LEU PRO SER ASP PHE PHE PRO SER SEQRES 3 A 149 VAL ARG ASP LEU LEU ASP THR ALA ALA ALA LEU TYR ARG SEQRES 4 A 149 ASP ALA LEU GLU SER PRO GLU HIS CYS SER PRO HIS HIS SEQRES 5 A 149 THR ALA LEU ARG GLN ALA ILE LEU CYS TRP GLY ASP LEU SEQRES 6 A 149 MET THR LEU ALA THR TRP VAL GLY THR ASN LEU GLU ASP SEQRES 7 A 149 PRO ALA SER ARG ASP LEU VAL VAL SER TYR VAL ASN THR SEQRES 8 A 149 ASN VAL GLY LEU LYS PHE ARG GLN LEU LEU TRP PHE HIS SEQRES 9 A 149 ILE SER CYS LEU THR PHE GLY ARG GLU THR VAL LEU GLU SEQRES 10 A 149 TYR LEU VAL SER PHE GLY VAL TRP ILE ARG THR PRO PRO SEQRES 11 A 149 ALA TYR ARG PRO PRO ASN ALA PRO ILE LEU SER THR LEU SEQRES 12 A 149 PRO GLU THR THR VAL VAL SEQRES 1 B 149 MET ASP ILE ASP PRO TYR LYS GLU PHE GLY ALA THR VAL SEQRES 2 B 149 GLU LEU LEU SER PHE LEU PRO SER ASP PHE PHE PRO SER SEQRES 3 B 149 VAL ARG ASP LEU LEU ASP THR ALA ALA ALA LEU TYR ARG SEQRES 4 B 149 ASP ALA LEU GLU SER PRO GLU HIS CYS SER PRO HIS HIS SEQRES 5 B 149 THR ALA LEU ARG GLN ALA ILE LEU CYS TRP GLY ASP LEU SEQRES 6 B 149 MET THR LEU ALA THR TRP VAL GLY THR ASN LEU GLU ASP SEQRES 7 B 149 PRO ALA SER ARG ASP LEU VAL VAL SER TYR VAL ASN THR SEQRES 8 B 149 ASN VAL GLY LEU LYS PHE ARG GLN LEU LEU TRP PHE HIS SEQRES 9 B 149 ILE SER CYS LEU THR PHE GLY ARG GLU THR VAL LEU GLU SEQRES 10 B 149 TYR LEU VAL SER PHE GLY VAL TRP ILE ARG THR PRO PRO SEQRES 11 B 149 ALA TYR ARG PRO PRO ASN ALA PRO ILE LEU SER THR LEU SEQRES 12 B 149 PRO GLU THR THR VAL VAL SEQRES 1 C 149 MET ASP ILE ASP PRO TYR LYS GLU PHE GLY ALA THR VAL SEQRES 2 C 149 GLU LEU LEU SER PHE LEU PRO SER ASP PHE PHE PRO SER SEQRES 3 C 149 VAL ARG ASP LEU LEU ASP THR ALA ALA ALA LEU TYR ARG SEQRES 4 C 149 ASP ALA LEU GLU SER PRO GLU HIS CYS SER PRO HIS HIS SEQRES 5 C 149 THR ALA LEU ARG GLN ALA ILE LEU CYS TRP GLY ASP LEU SEQRES 6 C 149 MET THR LEU ALA THR TRP VAL GLY THR ASN LEU GLU ASP SEQRES 7 C 149 PRO ALA SER ARG ASP LEU VAL VAL SER TYR VAL ASN THR SEQRES 8 C 149 ASN VAL GLY LEU LYS PHE ARG GLN LEU LEU TRP PHE HIS SEQRES 9 C 149 ILE SER CYS LEU THR PHE GLY ARG GLU THR VAL LEU GLU SEQRES 10 C 149 TYR LEU VAL SER PHE GLY VAL TRP ILE ARG THR PRO PRO SEQRES 11 C 149 ALA TYR ARG PRO PRO ASN ALA PRO ILE LEU SER THR LEU SEQRES 12 C 149 PRO GLU THR THR VAL VAL SEQRES 1 D 149 MET ASP ILE ASP PRO TYR LYS GLU PHE GLY ALA THR VAL SEQRES 2 D 149 GLU LEU LEU SER PHE LEU PRO SER ASP PHE PHE PRO SER SEQRES 3 D 149 VAL ARG ASP LEU LEU ASP THR ALA ALA ALA LEU TYR ARG SEQRES 4 D 149 ASP ALA LEU GLU SER PRO GLU HIS CYS SER PRO HIS HIS SEQRES 5 D 149 THR ALA LEU ARG GLN ALA ILE LEU CYS TRP GLY ASP LEU SEQRES 6 D 149 MET THR LEU ALA THR TRP VAL GLY THR ASN LEU GLU ASP SEQRES 7 D 149 PRO ALA SER ARG ASP LEU VAL VAL SER TYR VAL ASN THR SEQRES 8 D 149 ASN VAL GLY LEU LYS PHE ARG GLN LEU LEU TRP PHE HIS SEQRES 9 D 149 ILE SER CYS LEU THR PHE GLY ARG GLU THR VAL LEU GLU SEQRES 10 D 149 TYR LEU VAL SER PHE GLY VAL TRP ILE ARG THR PRO PRO SEQRES 11 D 149 ALA TYR ARG PRO PRO ASN ALA PRO ILE LEU SER THR LEU SEQRES 12 D 149 PRO GLU THR THR VAL VAL HELIX 1 AA1 TYR A 6 GLY A 10 5 5 HELIX 2 AA2 GLU A 14 PHE A 18 5 5 HELIX 3 AA3 SER A 26 LEU A 31 1 6 HELIX 4 AA4 SER A 49 LEU A 76 1 28 HELIX 5 AA5 ASP A 78 ASN A 90 1 13 HELIX 6 AA6 VAL A 93 GLY A 111 1 19 HELIX 7 AA7 GLY A 111 VAL A 124 1 14 HELIX 8 AA8 TYR B 6 GLY B 10 5 5 HELIX 9 AA9 GLU B 14 PHE B 18 5 5 HELIX 10 AB1 SER B 26 TYR B 38 1 13 HELIX 11 AB2 TYR B 38 GLU B 43 1 6 HELIX 12 AB3 SER B 49 VAL B 72 1 24 HELIX 13 AB4 ASP B 78 ASN B 92 1 15 HELIX 14 AB5 ASN B 92 GLY B 111 1 20 HELIX 15 AB6 GLY B 111 LEU B 116 1 6 HELIX 16 AB7 TYR B 118 VAL B 124 1 7 HELIX 17 AB8 PRO B 129 ARG B 133 5 5 HELIX 18 AB9 SER C 26 ASP C 29 5 4 HELIX 19 AC1 LEU C 30 ALA C 35 1 6 HELIX 20 AC2 SER C 49 MET C 66 1 18 HELIX 21 AC3 MET C 66 VAL C 72 1 7 HELIX 22 AC4 ASP C 78 ASN C 90 1 13 HELIX 23 AC5 ASN C 92 LEU C 95 5 4 HELIX 24 AC6 LYS C 96 SER C 106 1 11 HELIX 25 AC7 GLY C 111 PHE C 122 1 12 HELIX 26 AC8 LEU D 15 LEU D 19 5 5 HELIX 27 AC9 SER D 26 TYR D 38 1 13 HELIX 28 AD1 TYR D 38 SER D 44 1 7 HELIX 29 AD2 SER D 49 VAL D 72 1 24 HELIX 30 AD3 ASP D 78 ASN D 90 1 13 HELIX 31 AD4 VAL D 93 SER D 106 1 14 HELIX 32 AD5 GLY D 111 GLU D 117 1 7 HELIX 33 AD6 GLU D 117 ARG D 127 1 11 SSBOND 1 CYS A 61 CYS B 61 1555 1555 2.03 SSBOND 2 CYS C 61 CYS D 61 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000