HEADER LYASE 06-MAR-20 6W2O TITLE CRYSTAL STRUCTURE OF UROPORPHYRINOGEN III DECARBOXYLATE (HEME) FROM TITLE 2 STENOTROPHOMONAS MALTOPHILIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UROPORPHYRINOGEN DECARBOXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: URO-D; COMPND 5 EC: 4.1.1.37; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA (STRAIN K279A); SOURCE 3 ORGANISM_TAXID: 522373; SOURCE 4 STRAIN: K279A; SOURCE 5 GENE: HEME, SMLT3622; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, NIAID, AEROBIC KEYWDS 2 NONFERMENTATIVE GRAM-NEGATIVE BACTERIUM, HEME BIOSYNTHESIS, KEYWDS 3 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 4 INFECTIOUS DISEASE, SSGCID, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 6W2O 1 REMARK REVDAT 1 22-APR-20 6W2O 0 JRNL AUTH T.E.EDWARDS,D.R.DAVIES,P.S.HORANYI,D.D.LORIMER, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF UROPORPHYRINOGEN III DECARBOXYLATE JRNL TITL 2 (HEME) FROM STENOTROPHOMONAS MALTOPHILIA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18RC2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 64910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3920 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.9000 - 4.7100 0.98 2365 160 0.1695 0.1720 REMARK 3 2 4.7000 - 3.7400 1.00 2310 145 0.1265 0.1388 REMARK 3 3 3.7300 - 3.2600 0.99 2294 131 0.1384 0.1313 REMARK 3 4 3.2600 - 2.9700 0.99 2266 154 0.1543 0.1884 REMARK 3 5 2.9600 - 2.7500 0.99 2255 161 0.1598 0.1641 REMARK 3 6 2.7500 - 2.5900 0.99 2247 143 0.1513 0.1828 REMARK 3 7 2.5900 - 2.4600 0.99 2220 170 0.1616 0.1714 REMARK 3 8 2.4600 - 2.3500 0.99 2270 140 0.1573 0.1933 REMARK 3 9 2.3500 - 2.2600 0.99 2227 135 0.1488 0.1794 REMARK 3 10 2.2600 - 2.1800 0.99 2253 127 0.1527 0.1711 REMARK 3 11 2.1800 - 2.1200 0.99 2215 154 0.1504 0.1709 REMARK 3 12 2.1200 - 2.0600 0.98 2233 129 0.1592 0.1784 REMARK 3 13 2.0600 - 2.0000 0.98 2177 155 0.1547 0.1781 REMARK 3 14 2.0000 - 1.9500 0.98 2204 141 0.1574 0.1781 REMARK 3 15 1.9500 - 1.9100 0.98 2186 146 0.1689 0.1947 REMARK 3 16 1.9100 - 1.8700 0.97 2184 148 0.1607 0.1877 REMARK 3 17 1.8700 - 1.8300 0.96 2167 133 0.1579 0.1593 REMARK 3 18 1.8300 - 1.8000 0.96 2150 131 0.1672 0.1757 REMARK 3 19 1.8000 - 1.7600 0.95 2134 124 0.1640 0.1772 REMARK 3 20 1.7600 - 1.7300 0.95 2124 157 0.1567 0.2024 REMARK 3 21 1.7300 - 1.7100 0.95 2129 124 0.1653 0.1933 REMARK 3 22 1.7100 - 1.6800 0.93 2092 135 0.1630 0.2081 REMARK 3 23 1.6800 - 1.6600 0.93 2097 128 0.1672 0.2203 REMARK 3 24 1.6600 - 1.6300 0.91 2032 128 0.1721 0.1757 REMARK 3 25 1.6300 - 1.6100 0.92 2073 148 0.1732 0.2073 REMARK 3 26 1.6100 - 1.5900 0.92 2057 135 0.1781 0.1901 REMARK 3 27 1.5900 - 1.5700 0.89 1992 126 0.1895 0.2048 REMARK 3 28 1.5700 - 1.5500 0.89 2037 112 0.1959 0.2466 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4483 -48.6294 6.6697 REMARK 3 T TENSOR REMARK 3 T11: 0.1049 T22: 0.1593 REMARK 3 T33: 0.1152 T12: -0.0055 REMARK 3 T13: -0.0237 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.6070 L22: 0.9158 REMARK 3 L33: 1.1566 L12: 0.1245 REMARK 3 L13: -0.7543 L23: -0.4563 REMARK 3 S TENSOR REMARK 3 S11: -0.0284 S12: -0.0704 S13: 0.0595 REMARK 3 S21: 0.0072 S22: 0.0092 S23: -0.0670 REMARK 3 S31: 0.0017 S32: 0.1351 S33: 0.0303 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1191 -37.3490 16.6972 REMARK 3 T TENSOR REMARK 3 T11: 0.1498 T22: 0.1752 REMARK 3 T33: 0.1269 T12: -0.0042 REMARK 3 T13: -0.0256 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 1.5199 L22: 1.4798 REMARK 3 L33: 0.8892 L12: -0.7968 REMARK 3 L13: -0.0876 L23: -0.1014 REMARK 3 S TENSOR REMARK 3 S11: -0.0422 S12: -0.1226 S13: 0.0910 REMARK 3 S21: 0.0557 S22: 0.0870 S23: -0.0178 REMARK 3 S31: -0.0938 S32: 0.0907 S33: -0.0433 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 263 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1105 -33.7082 -4.5877 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.1451 REMARK 3 T33: 0.1717 T12: -0.0209 REMARK 3 T13: 0.0044 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.9429 L22: 1.6697 REMARK 3 L33: 1.5771 L12: 0.0246 REMARK 3 L13: 0.1809 L23: 0.7530 REMARK 3 S TENSOR REMARK 3 S11: 0.0400 S12: -0.0467 S13: 0.2069 REMARK 3 S21: -0.0412 S22: -0.0490 S23: -0.0434 REMARK 3 S31: -0.1552 S32: 0.0592 S33: 0.0092 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6W2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247523. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67246 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 44.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.457 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.55 REMARK 200 R MERGE FOR SHELL (I) : 0.52700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4WSH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: STMAA.01152.A.B1.PW38744 AT 20.4 MG/ML REMARK 280 AGAINST JCSG+ CONDITION G11: 0.1 M BISTRIS PH 5.5, 2.0 M REMARK 280 AMMONIUM SULFATE, SUPPLEMENTED WITH 20% ETHYLENE GLYCOL AS CRYO- REMARK 280 PROTECTANT, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.90667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.81333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.81333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.90667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 93 CG1 CG2 REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 GLU A 96 CG CD OE1 OE2 REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 GLU A 242 CG CD OE1 OE2 REMARK 470 LEU A 255 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 702 O HOH A 823 2.06 REMARK 500 O HOH A 589 O HOH A 705 2.06 REMARK 500 OD1 ASP A 164 O HOH A 501 2.12 REMARK 500 O HOH A 514 O HOH A 813 2.16 REMARK 500 OE1 GLU A 233 O HOH A 502 2.18 REMARK 500 O HOH A 696 O HOH A 838 2.19 REMARK 500 O HOH A 822 O HOH A 851 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 829 O HOH A 921 3544 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 77 -158.44 -164.81 REMARK 500 GLU A 89 77.75 61.77 REMARK 500 GLU A 94 102.55 -45.10 REMARK 500 GLN A 120 -62.23 -98.54 REMARK 500 SER A 224 -57.22 -124.10 REMARK 500 ASN A 292 37.96 -144.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 970 DISTANCE = 5.84 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 408 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-STMAA.01152.A RELATED DB: TARGETTRACK DBREF 6W2O A 2 357 UNP B2FQJ0 B2FQJ0_STRMK 5 360 SEQADV 6W2O MET A -7 UNP B2FQJ0 INITIATING METHIONINE SEQADV 6W2O ALA A -6 UNP B2FQJ0 EXPRESSION TAG SEQADV 6W2O HIS A -5 UNP B2FQJ0 EXPRESSION TAG SEQADV 6W2O HIS A -4 UNP B2FQJ0 EXPRESSION TAG SEQADV 6W2O HIS A -3 UNP B2FQJ0 EXPRESSION TAG SEQADV 6W2O HIS A -2 UNP B2FQJ0 EXPRESSION TAG SEQADV 6W2O HIS A -1 UNP B2FQJ0 EXPRESSION TAG SEQADV 6W2O HIS A 0 UNP B2FQJ0 EXPRESSION TAG SEQADV 6W2O MET A 1 UNP B2FQJ0 EXPRESSION TAG SEQRES 1 A 365 MET ALA HIS HIS HIS HIS HIS HIS MET THR SER PRO LEU SEQRES 2 A 365 ARG ASN ASP ARG LEU LEU ARG ALA LEU ARG ARG GLU PRO SEQRES 3 A 365 VAL ASP CYS THR PRO VAL TRP LEU MET ARG GLN ALA GLY SEQRES 4 A 365 ARG TYR LEU PRO GLU TYR ARG ALA THR ARG ALA LYS ALA SEQRES 5 A 365 GLY SER PHE LEU ALA MET ALA LYS ASN PRO GLU ILE ALA SEQRES 6 A 365 CYS GLU VAL THR LEU GLN PRO LEU ARG ARG PHE PRO LEU SEQRES 7 A 365 ASP ALA ALA ILE LEU PHE SER ASP ILE LEU THR ILE PRO SEQRES 8 A 365 ASP ALA MET GLY LEU GLU LEU TYR PHE VAL GLU GLY GLU SEQRES 9 A 365 GLY PRO LYS PHE ARG HIS PRO VAL ARG ASP GLU ALA ALA SEQRES 10 A 365 ILE ALA ARG LEU ALA VAL PRO ASP MET GLU GLN ASP LEU SEQRES 11 A 365 GLY TYR VAL MET ASP ALA VAL ARG LEU ILE ARG ARG GLU SEQRES 12 A 365 LEU ASP GLY GLN VAL PRO LEU ILE GLY PHE SER GLY SER SEQRES 13 A 365 PRO TRP THR LEU ALA CYS TYR MET VAL GLU GLY GLY GLY SEQRES 14 A 365 SER LYS ASP PHE ALA ARG ILE LYS ALA MET ALA LEU ASN SEQRES 15 A 365 HIS PRO GLN ALA LEU HIS ARG LEU LEU GLU VAL THR THR SEQRES 16 A 365 ASP ALA VAL ILE ALA TYR LEU GLY ALA GLN ARG ALA ALA SEQRES 17 A 365 GLY ALA GLN ALA LEU GLN VAL PHE ASP THR TRP GLY GLY SEQRES 18 A 365 VAL LEU SER PRO ALA MET TYR ARG GLU PHE SER LEU ARG SEQRES 19 A 365 TYR LEU GLN ARG ILE ALA GLU GLY LEU GLU ARG GLY GLU SEQRES 20 A 365 GLY SER GLU ARG THR PRO LEU ILE LEU PHE GLY LYS GLY SEQRES 21 A 365 THR GLY LEU HIS LEU GLU ALA LEU SER GLN THR GLY ALA SEQRES 22 A 365 ASP ALA LEU GLY LEU ASP TRP THR LEU ASP LEU ASP GLU SEQRES 23 A 365 ALA MET ARG ARG THR GLY GLY ARG VAL ALA LEU GLN GLY SEQRES 24 A 365 ASN LEU ASP PRO THR THR LEU TYR ALA SER PRO ASP ALA SEQRES 25 A 365 ILE ALA ALA ALA ALA ALA ARG VAL LEU ASP THR TYR ALA SEQRES 26 A 365 ALA GLY ASN GLY GLY SER ARG GLU GLY HIS VAL PHE ASN SEQRES 27 A 365 LEU GLY HIS GLY MET SER PRO ASP MET ASP PRO ALA HIS SEQRES 28 A 365 VAL GLN VAL LEU VAL ASP ALA VAL HIS ALA HIS SER GLN SEQRES 29 A 365 ARG HET EDO A 401 4 HET EDO A 402 4 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET CL A 407 1 HET CL A 408 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 CL 2(CL 1-) FORMUL 10 HOH *470(H2 O) HELIX 1 AA1 ASP A 8 ARG A 15 1 8 HELIX 2 AA2 LEU A 34 GLY A 45 1 12 HELIX 3 AA3 SER A 46 LYS A 52 1 7 HELIX 4 AA4 ASN A 53 GLN A 63 1 11 HELIX 5 AA5 PRO A 64 ARG A 67 5 4 HELIX 6 AA6 LEU A 80 MET A 86 1 7 HELIX 7 AA7 ASP A 106 LEU A 113 1 8 HELIX 8 AA8 ASP A 117 LEU A 122 1 6 HELIX 9 AA9 LEU A 122 ASP A 137 1 16 HELIX 10 AB1 SER A 148 GLY A 159 1 12 HELIX 11 AB2 PHE A 165 HIS A 175 1 11 HELIX 12 AB3 HIS A 175 GLY A 201 1 27 HELIX 13 AB4 TRP A 211 LEU A 215 5 5 HELIX 14 AB5 SER A 216 SER A 224 1 9 HELIX 15 AB6 SER A 224 LEU A 235 1 12 HELIX 16 AB7 GLU A 239 ARG A 243 5 5 HELIX 17 AB8 THR A 253 LEU A 255 5 3 HELIX 18 AB9 HIS A 256 GLN A 262 1 7 HELIX 19 AC1 ASP A 275 GLY A 284 1 10 HELIX 20 AC2 ASP A 294 ALA A 300 5 7 HELIX 21 AC3 SER A 301 GLY A 319 1 19 HELIX 22 AC4 ASP A 340 SER A 355 1 16 SHEET 1 AA1 7 ALA A 73 ILE A 74 0 SHEET 2 AA1 7 LEU A 142 GLY A 147 1 O ILE A 143 N ALA A 73 SHEET 3 AA1 7 ALA A 204 PHE A 208 1 O ALA A 204 N GLY A 144 SHEET 4 AA1 7 LEU A 246 PHE A 249 1 O PHE A 249 N VAL A 207 SHEET 5 AA1 7 ALA A 267 GLY A 269 1 O GLY A 269 N LEU A 248 SHEET 6 AA1 7 ALA A 288 GLN A 290 1 O GLN A 290 N LEU A 268 SHEET 7 AA1 7 HIS A 327 VAL A 328 1 O VAL A 328 N LEU A 289 SHEET 1 AA2 2 LEU A 90 PHE A 92 0 SHEET 2 AA2 2 PRO A 98 PHE A 100 -1 O LYS A 99 N TYR A 91 CISPEP 1 GLY A 291 ASN A 292 0 3.65 SITE 1 AC1 4 PHE A 145 PHE A 208 CL A 408 HOH A 539 SITE 1 AC2 6 ALA A 166 ALA A 170 TYR A 299 HOH A 632 SITE 2 AC2 6 HOH A 633 HOH A 714 SITE 1 AC3 8 ASN A 174 HIS A 175 PRO A 176 GLN A 177 SITE 2 AC3 8 ALA A 178 HOH A 541 HOH A 588 HOH A 680 SITE 1 AC4 4 SER A 162 LYS A 163 ASP A 164 HOH A 501 SITE 1 AC5 2 ARG A 16 HOH A 600 SITE 1 AC6 2 ARG A 28 HIS A 333 SITE 1 AC7 1 ARG A 32 SITE 1 AC8 3 ARG A 28 EDO A 401 HOH A 850 CRYST1 103.690 103.690 74.720 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009644 0.005568 0.000000 0.00000 SCALE2 0.000000 0.011136 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013383 0.00000