HEADER HYDROLASE 08-MAR-20 6W33 TITLE CRYSTAL STRUCTURE OF CLASS A BETA-LACTAMASE FROM BACILLUS CEREUS IN TITLE 2 THE COMPLEX WITH THE BETA-LACTAMASE INHIBITOR CLAVULANATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS (STRAIN ATCC 14579 / DSM 31 / SOURCE 3 JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711); SOURCE 4 ORGANISM_TAXID: 226900; SOURCE 5 STRAIN: ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / SOURCE 6 NRRL B-3711; SOURCE 7 GENE: BLA, EJ379_12650; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS BETA-LACTAMASES, ANTIBIOTIC RESISTANT, INHIBITOR, STRUCTURAL KEYWDS 2 GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, KEYWDS 3 CSGID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 OF INFECTIOUS DISEASES (CSGID) REVDAT 2 18-OCT-23 6W33 1 REMARK REVDAT 1 25-MAR-20 6W33 0 JRNL AUTH Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF CLASS A BETA-LACTAMASE FROM BACILLUS JRNL TITL 2 CEREUS IN THE COMPLEX WITH THE BETA-LACTAMASE INHIBITOR JRNL TITL 3 CLAVULANATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 43702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 2242 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1300 - 4.6600 0.99 2575 174 0.1470 0.1571 REMARK 3 2 4.6600 - 3.7000 0.98 2561 155 0.1496 0.1527 REMARK 3 3 3.7000 - 3.2300 1.00 2650 130 0.1723 0.2439 REMARK 3 4 3.2300 - 2.9400 0.99 2569 160 0.2046 0.2622 REMARK 3 5 2.9400 - 2.7300 0.99 2588 142 0.2012 0.2661 REMARK 3 6 2.7300 - 2.5700 1.00 2613 143 0.2009 0.2559 REMARK 3 7 2.5700 - 2.4400 0.99 2656 121 0.2012 0.2739 REMARK 3 8 2.4400 - 2.3300 0.99 2609 137 0.2018 0.2571 REMARK 3 9 2.3300 - 2.2400 0.98 2580 134 0.2083 0.2694 REMARK 3 10 2.2400 - 2.1600 0.99 2613 143 0.2067 0.2426 REMARK 3 11 2.1600 - 2.1000 1.00 2631 130 0.2090 0.2664 REMARK 3 12 2.1000 - 2.0400 0.98 2571 132 0.2073 0.2476 REMARK 3 13 2.0400 - 1.9800 0.99 2646 120 0.2224 0.2756 REMARK 3 14 1.9800 - 1.9300 0.99 2603 167 0.2366 0.3017 REMARK 3 15 1.9300 - 1.8900 0.98 2548 140 0.2560 0.2532 REMARK 3 16 1.8900 - 1.8500 0.92 2447 114 0.2804 0.3288 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.239 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.378 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4177 REMARK 3 ANGLE : 0.847 5650 REMARK 3 CHIRALITY : 0.053 643 REMARK 3 PLANARITY : 0.005 729 REMARK 3 DIHEDRAL : 15.049 2540 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7560 2.7331 -13.5540 REMARK 3 T TENSOR REMARK 3 T11: 0.5072 T22: 0.3331 REMARK 3 T33: 0.6666 T12: 0.0235 REMARK 3 T13: 0.3352 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 2.0221 L22: 7.0128 REMARK 3 L33: 2.9848 L12: -1.0905 REMARK 3 L13: 3.9968 L23: -3.5608 REMARK 3 S TENSOR REMARK 3 S11: 0.4103 S12: 1.7872 S13: 0.2562 REMARK 3 S21: -1.2784 S22: 0.2789 S23: -0.5622 REMARK 3 S31: 0.1793 S32: 0.7408 S33: -0.4212 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1309 -0.8414 -7.0914 REMARK 3 T TENSOR REMARK 3 T11: 0.2693 T22: 0.1488 REMARK 3 T33: 0.3018 T12: -0.0301 REMARK 3 T13: 0.0592 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 2.6833 L22: 2.2520 REMARK 3 L33: 1.4465 L12: 0.1641 REMARK 3 L13: -0.4036 L23: 0.5166 REMARK 3 S TENSOR REMARK 3 S11: -0.1082 S12: 0.2216 S13: 0.2450 REMARK 3 S21: -0.4612 S22: 0.1493 S23: -0.1943 REMARK 3 S31: -0.0272 S32: 0.0578 S33: -0.0098 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4090 -3.2020 15.2619 REMARK 3 T TENSOR REMARK 3 T11: 0.3124 T22: 0.3722 REMARK 3 T33: 0.4320 T12: -0.0557 REMARK 3 T13: 0.1489 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.1020 L22: 4.1239 REMARK 3 L33: 6.9795 L12: -0.9059 REMARK 3 L13: 2.6721 L23: -3.5553 REMARK 3 S TENSOR REMARK 3 S11: 0.2611 S12: -0.4940 S13: -0.1227 REMARK 3 S21: 0.3917 S22: -0.0094 S23: 1.1303 REMARK 3 S31: 0.1879 S32: -0.4576 S33: -0.2762 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7322 -2.4038 14.6969 REMARK 3 T TENSOR REMARK 3 T11: 0.2815 T22: 0.3027 REMARK 3 T33: 0.2852 T12: 0.0235 REMARK 3 T13: 0.0766 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 2.2544 L22: 3.2876 REMARK 3 L33: 4.0940 L12: 0.4353 REMARK 3 L13: -1.1943 L23: -0.1309 REMARK 3 S TENSOR REMARK 3 S11: 0.0293 S12: -0.4777 S13: 0.0167 REMARK 3 S21: 0.5174 S22: -0.1408 S23: 0.2165 REMARK 3 S31: -0.0300 S32: 0.0702 S33: 0.0951 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5214 -11.1654 -2.6628 REMARK 3 T TENSOR REMARK 3 T11: 0.2418 T22: 0.1876 REMARK 3 T33: 0.3048 T12: -0.0397 REMARK 3 T13: 0.0821 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 2.1219 L22: 3.1526 REMARK 3 L33: 5.8207 L12: -0.0833 REMARK 3 L13: -0.7283 L23: -0.6867 REMARK 3 S TENSOR REMARK 3 S11: -0.2868 S12: 0.1046 S13: -0.2817 REMARK 3 S21: -0.1377 S22: 0.0839 S23: 0.1966 REMARK 3 S31: 0.3061 S32: -0.4637 S33: 0.2328 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.9619 -1.2346 -2.5147 REMARK 3 T TENSOR REMARK 3 T11: 0.1808 T22: 0.1201 REMARK 3 T33: 0.2104 T12: -0.0367 REMARK 3 T13: 0.0304 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 3.4663 L22: 2.6543 REMARK 3 L33: 2.0692 L12: -0.4746 REMARK 3 L13: -0.8590 L23: -0.0021 REMARK 3 S TENSOR REMARK 3 S11: -0.0845 S12: 0.0299 S13: 0.0454 REMARK 3 S21: 0.0597 S22: 0.0601 S23: 0.1281 REMARK 3 S31: 0.0037 S32: -0.1186 S33: -0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 235 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9873 7.1272 0.8891 REMARK 3 T TENSOR REMARK 3 T11: 0.2267 T22: 0.1495 REMARK 3 T33: 0.3311 T12: 0.0009 REMARK 3 T13: 0.0072 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 1.4090 L22: 3.1561 REMARK 3 L33: 1.1003 L12: 0.3677 REMARK 3 L13: -0.2548 L23: -0.1540 REMARK 3 S TENSOR REMARK 3 S11: 0.1227 S12: -0.0755 S13: 0.3135 REMARK 3 S21: 0.0083 S22: 0.0207 S23: -0.3045 REMARK 3 S31: -0.1973 S32: 0.1195 S33: -0.1514 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 274 THROUGH 296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8067 1.3847 -3.0686 REMARK 3 T TENSOR REMARK 3 T11: 0.1510 T22: 0.2168 REMARK 3 T33: 0.3108 T12: -0.0418 REMARK 3 T13: 0.0037 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 3.8221 L22: 4.9453 REMARK 3 L33: 2.1954 L12: -1.2302 REMARK 3 L13: 0.2650 L23: -0.0244 REMARK 3 S TENSOR REMARK 3 S11: 0.0982 S12: 0.0685 S13: 0.1570 REMARK 3 S21: -0.2392 S22: 0.0210 S23: -0.6158 REMARK 3 S31: 0.2162 S32: 0.2277 S33: -0.1196 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 297 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3481 8.5989 -6.8075 REMARK 3 T TENSOR REMARK 3 T11: 0.3677 T22: 0.1373 REMARK 3 T33: 0.5223 T12: -0.0265 REMARK 3 T13: 0.1403 T23: -0.0295 REMARK 3 L TENSOR REMARK 3 L11: 4.2397 L22: 3.7524 REMARK 3 L33: 3.7179 L12: -1.8387 REMARK 3 L13: 2.7179 L23: -3.1079 REMARK 3 S TENSOR REMARK 3 S11: 0.0313 S12: 0.2807 S13: 0.2519 REMARK 3 S21: -0.4672 S22: 0.0673 S23: -0.5476 REMARK 3 S31: -0.1630 S32: -0.2508 S33: 0.0670 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5905 -27.1671 -51.0614 REMARK 3 T TENSOR REMARK 3 T11: 0.6856 T22: 0.4744 REMARK 3 T33: 0.3365 T12: 0.0396 REMARK 3 T13: 0.1169 T23: -0.1213 REMARK 3 L TENSOR REMARK 3 L11: 5.3061 L22: 4.9189 REMARK 3 L33: 5.2946 L12: 0.0034 REMARK 3 L13: -1.4753 L23: 1.7555 REMARK 3 S TENSOR REMARK 3 S11: -0.3738 S12: 0.8287 S13: -0.7290 REMARK 3 S21: -0.9158 S22: 0.3237 S23: -0.6182 REMARK 3 S31: 0.7433 S32: 0.6444 S33: -0.0307 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5104 -15.3310 -28.9792 REMARK 3 T TENSOR REMARK 3 T11: 0.3850 T22: 0.2898 REMARK 3 T33: 0.2624 T12: -0.0133 REMARK 3 T13: 0.0166 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 2.6227 L22: 2.5857 REMARK 3 L33: 7.8378 L12: -1.3659 REMARK 3 L13: -4.4571 L23: 2.7399 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: -0.1434 S13: 0.2331 REMARK 3 S21: 0.0545 S22: 0.2245 S23: -0.2019 REMARK 3 S31: -0.0175 S32: 0.4808 S33: -0.2407 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 235 THROUGH 296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6528 -28.1655 -37.7386 REMARK 3 T TENSOR REMARK 3 T11: 0.7901 T22: 0.3888 REMARK 3 T33: 0.3682 T12: 0.0340 REMARK 3 T13: 0.1951 T23: -0.0746 REMARK 3 L TENSOR REMARK 3 L11: 3.8260 L22: 3.8001 REMARK 3 L33: 4.6245 L12: 0.2324 REMARK 3 L13: -2.6579 L23: 0.9211 REMARK 3 S TENSOR REMARK 3 S11: -0.6298 S12: 0.8625 S13: -1.0382 REMARK 3 S21: 0.4660 S22: -0.1308 S23: 0.1427 REMARK 3 S31: 1.5525 S32: -0.0002 S33: 0.3390 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 297 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9158 -32.9239 -44.4332 REMARK 3 T TENSOR REMARK 3 T11: 0.9603 T22: 0.4538 REMARK 3 T33: 0.5532 T12: -0.0334 REMARK 3 T13: 0.2064 T23: -0.0655 REMARK 3 L TENSOR REMARK 3 L11: 5.1461 L22: 7.2997 REMARK 3 L33: 8.2905 L12: -3.9063 REMARK 3 L13: -3.4649 L23: 0.4445 REMARK 3 S TENSOR REMARK 3 S11: -0.0766 S12: 0.3528 S13: -1.5477 REMARK 3 S21: -0.3785 S22: -0.2365 S23: -0.3497 REMARK 3 S31: 2.1895 S32: -0.1775 S33: 0.3706 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6W33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43737 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.58100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: PDBID 3QHY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M MES PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 29 REMARK 465 ASN A 30 REMARK 465 ALA A 31 REMARK 465 PHE A 32 REMARK 465 THR A 33 REMARK 465 GLY A 34 REMARK 465 GLY A 35 REMARK 465 ALA A 36 REMARK 465 LEU A 37 REMARK 465 GLN A 38 REMARK 465 VAL A 39 REMARK 465 GLU A 40 REMARK 465 ALA A 41 REMARK 465 LYS A 42 REMARK 465 GLU A 43 REMARK 465 LYS A 44 REMARK 465 THR A 45 REMARK 465 GLY A 46 REMARK 465 GLN A 47 REMARK 465 VAL A 48 REMARK 465 LYS A 49 REMARK 465 HIS A 50 REMARK 465 LYS A 312 REMARK 465 SER B 29 REMARK 465 ASN B 30 REMARK 465 ALA B 31 REMARK 465 PHE B 32 REMARK 465 THR B 33 REMARK 465 GLY B 34 REMARK 465 GLY B 35 REMARK 465 ALA B 36 REMARK 465 LEU B 37 REMARK 465 GLN B 38 REMARK 465 VAL B 39 REMARK 465 GLU B 40 REMARK 465 ALA B 41 REMARK 465 LYS B 42 REMARK 465 GLU B 43 REMARK 465 LYS B 44 REMARK 465 THR B 45 REMARK 465 GLY B 46 REMARK 465 GLN B 47 REMARK 465 VAL B 48 REMARK 465 LYS B 49 REMARK 465 HIS B 50 REMARK 465 LYS B 312 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 LYS B 51 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 80 15.37 55.79 REMARK 500 ALA A 94 -143.31 51.83 REMARK 500 TYR A 128 75.55 59.23 REMARK 500 ASP A 186 -37.95 -135.42 REMARK 500 LEU A 243 -119.50 -111.07 REMARK 500 ASP B 67 62.81 33.17 REMARK 500 ALA B 94 -141.93 52.69 REMARK 500 TYR B 128 71.45 53.78 REMARK 500 ASP B 137 -50.46 73.59 REMARK 500 ASP B 186 -35.39 -137.22 REMARK 500 ASN B 220 41.28 -106.06 REMARK 500 LEU B 243 -119.30 -121.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP97250 RELATED DB: TARGETTRACK DBREF1 6W33 A 33 312 UNP A0A5B7VP54_BACCR DBREF2 6W33 A A0A5B7VP54 29 308 DBREF1 6W33 B 33 312 UNP A0A5B7VP54_BACCR DBREF2 6W33 B A0A5B7VP54 29 308 SEQADV 6W33 SER A 29 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 ASN A 30 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 ALA A 31 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 PHE A 32 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 THR A 278 UNP A0A5B7VP5 ALA 274 ENGINEERED MUTATION SEQADV 6W33 SER B 29 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 ASN B 30 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 ALA B 31 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 PHE B 32 UNP A0A5B7VP5 EXPRESSION TAG SEQADV 6W33 THR B 278 UNP A0A5B7VP5 ALA 274 ENGINEERED MUTATION SEQRES 1 A 284 SER ASN ALA PHE THR GLY GLY ALA LEU GLN VAL GLU ALA SEQRES 2 A 284 LYS GLU LYS THR GLY GLN VAL LYS HIS LYS ASN GLN ALA SEQRES 3 A 284 THR HIS LYS GLU PHE SER GLN LEU GLU LYS LYS PHE ASP SEQRES 4 A 284 ALA ARG LEU GLY VAL TYR ALA ILE ASP THR GLY THR ASN SEQRES 5 A 284 GLN THR ILE SER TYR ARG SER ASN GLU ARG PHE ALA PHE SEQRES 6 A 284 ALA 1X6 THR TYR LYS ALA LEU ALA ALA GLY VAL LEU LEU SEQRES 7 A 284 GLN GLN ASN SER ILE ASP SER LEU ASN GLU VAL ILE THR SEQRES 8 A 284 TYR THR LYS GLU ASP LEU VAL ASP TYR SER PRO VAL THR SEQRES 9 A 284 GLU LYS HIS VAL ASP THR GLY MET LYS LEU GLY GLU ILE SEQRES 10 A 284 ALA GLU ALA ALA VAL ARG SER SER ASP ASN THR ALA GLY SEQRES 11 A 284 ASN ILE LEU PHE ASN LYS ILE GLY GLY PRO LYS GLY TYR SEQRES 12 A 284 GLU LYS ALA LEU ARG HIS MET GLY ASP ARG ILE THR MET SEQRES 13 A 284 SER ASP ARG PHE GLU THR GLU LEU ASN GLU ALA ILE PRO SEQRES 14 A 284 GLY ASP ILE ARG ASP THR SER THR ALA LYS ALA ILE ALA SEQRES 15 A 284 THR ASN LEU LYS ALA PHE THR VAL GLY ASN ALA LEU PRO SEQRES 16 A 284 ALA GLU LYS ARG LYS ILE LEU THR GLU TRP MET LYS GLY SEQRES 17 A 284 ASN ALA THR GLY ASP LYS LEU ILE ARG ALA GLY VAL PRO SEQRES 18 A 284 THR ASP TRP VAL VAL GLY ASP LYS SER GLY ALA GLY SER SEQRES 19 A 284 TYR GLY THR ARG ASN ASP ILE ALA ILE VAL TRP PRO PRO SEQRES 20 A 284 ASN ARG THR PRO ILE ILE ILE ALA ILE LEU SER SER LYS SEQRES 21 A 284 ASP GLU LYS GLU ALA THR TYR ASP ASN GLN LEU ILE ALA SEQRES 22 A 284 GLU ALA THR GLU VAL ILE VAL LYS ALA LEU LYS SEQRES 1 B 284 SER ASN ALA PHE THR GLY GLY ALA LEU GLN VAL GLU ALA SEQRES 2 B 284 LYS GLU LYS THR GLY GLN VAL LYS HIS LYS ASN GLN ALA SEQRES 3 B 284 THR HIS LYS GLU PHE SER GLN LEU GLU LYS LYS PHE ASP SEQRES 4 B 284 ALA ARG LEU GLY VAL TYR ALA ILE ASP THR GLY THR ASN SEQRES 5 B 284 GLN THR ILE SER TYR ARG SER ASN GLU ARG PHE ALA PHE SEQRES 6 B 284 ALA 1X6 THR TYR LYS ALA LEU ALA ALA GLY VAL LEU LEU SEQRES 7 B 284 GLN GLN ASN SER ILE ASP SER LEU ASN GLU VAL ILE THR SEQRES 8 B 284 TYR THR LYS GLU ASP LEU VAL ASP TYR SER PRO VAL THR SEQRES 9 B 284 GLU LYS HIS VAL ASP THR GLY MET LYS LEU GLY GLU ILE SEQRES 10 B 284 ALA GLU ALA ALA VAL ARG SER SER ASP ASN THR ALA GLY SEQRES 11 B 284 ASN ILE LEU PHE ASN LYS ILE GLY GLY PRO LYS GLY TYR SEQRES 12 B 284 GLU LYS ALA LEU ARG HIS MET GLY ASP ARG ILE THR MET SEQRES 13 B 284 SER ASP ARG PHE GLU THR GLU LEU ASN GLU ALA ILE PRO SEQRES 14 B 284 GLY ASP ILE ARG ASP THR SER THR ALA LYS ALA ILE ALA SEQRES 15 B 284 THR ASN LEU LYS ALA PHE THR VAL GLY ASN ALA LEU PRO SEQRES 16 B 284 ALA GLU LYS ARG LYS ILE LEU THR GLU TRP MET LYS GLY SEQRES 17 B 284 ASN ALA THR GLY ASP LYS LEU ILE ARG ALA GLY VAL PRO SEQRES 18 B 284 THR ASP TRP VAL VAL GLY ASP LYS SER GLY ALA GLY SER SEQRES 19 B 284 TYR GLY THR ARG ASN ASP ILE ALA ILE VAL TRP PRO PRO SEQRES 20 B 284 ASN ARG THR PRO ILE ILE ILE ALA ILE LEU SER SER LYS SEQRES 21 B 284 ASP GLU LYS GLU ALA THR TYR ASP ASN GLN LEU ILE ALA SEQRES 22 B 284 GLU ALA THR GLU VAL ILE VAL LYS ALA LEU LYS MODRES 6W33 1X6 A 95 SER MODIFIED RESIDUE MODRES 6W33 1X6 B 95 SER MODIFIED RESIDUE HET 1X6 A 95 11 HET 1X6 B 95 11 HET CL A 401 1 HET SO4 A 402 5 HET EDO A 403 4 HET GOL A 404 6 HET MES A 405 12 HET EDO A 406 4 HET EDO A 407 4 HET GOL A 408 6 HET EDO A 409 4 HET MES B 401 12 HETNAM 1X6 O-[(2E)-3-AMINOPROP-2-ENOYL]-L-SERINE HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 1X6 2(C6 H10 N2 O4) FORMUL 3 CL CL 1- FORMUL 4 SO4 O4 S 2- FORMUL 5 EDO 4(C2 H6 O2) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 7 MES 2(C6 H13 N O4 S) FORMUL 13 HOH *195(H2 O) HELIX 1 AA1 LYS A 51 ASP A 67 1 17 HELIX 2 AA2 THR A 96 ASN A 109 1 14 HELIX 3 AA3 ILE A 111 ASN A 115 5 5 HELIX 4 AA4 THR A 121 LEU A 125 5 5 HELIX 5 AA5 VAL A 131 HIS A 135 5 5 HELIX 6 AA6 LEU A 142 SER A 153 1 12 HELIX 7 AA7 ASP A 154 ILE A 165 1 12 HELIX 8 AA8 GLY A 166 MET A 178 1 13 HELIX 9 AA9 THR A 190 GLU A 194 5 5 HELIX 10 AB1 THR A 205 VAL A 218 1 14 HELIX 11 AB2 PRO A 223 LYS A 235 1 13 HELIX 12 AB3 ASN A 237 ASP A 241 5 5 HELIX 13 AB4 LEU A 243 VAL A 248 5 6 HELIX 14 AB5 ASP A 296 LEU A 311 1 16 HELIX 15 AB6 ASN B 52 ASP B 67 1 16 HELIX 16 AB7 THR B 96 ASN B 109 1 14 HELIX 17 AB8 ILE B 111 ASN B 115 5 5 HELIX 18 AB9 THR B 121 LEU B 125 5 5 HELIX 19 AC1 VAL B 131 VAL B 136 5 6 HELIX 20 AC2 LEU B 142 SER B 153 1 12 HELIX 21 AC3 ASP B 154 ILE B 165 1 12 HELIX 22 AC4 GLY B 166 HIS B 177 1 12 HELIX 23 AC5 THR B 190 GLU B 194 5 5 HELIX 24 AC6 THR B 205 VAL B 218 1 14 HELIX 25 AC7 PRO B 223 LYS B 235 1 13 HELIX 26 AC8 ASN B 237 ASP B 241 5 5 HELIX 27 AC9 LEU B 243 VAL B 248 5 6 HELIX 28 AD1 ASP B 296 LEU B 311 1 16 SHEET 1 AA1 5 THR A 82 TYR A 85 0 SHEET 2 AA1 5 ARG A 69 ASP A 76 -1 N VAL A 72 O TYR A 85 SHEET 3 AA1 5 ILE A 280 SER A 287 -1 O LEU A 285 N GLY A 71 SHEET 4 AA1 5 THR A 265 TRP A 273 -1 N ALA A 270 O ILE A 282 SHEET 5 AA1 5 VAL A 253 GLY A 261 -1 N VAL A 253 O TRP A 273 SHEET 1 AA2 2 PHE A 91 ALA A 92 0 SHEET 2 AA2 2 THR A 203 SER A 204 -1 O SER A 204 N PHE A 91 SHEET 1 AA3 2 VAL A 117 ILE A 118 0 SHEET 2 AA3 2 MET A 140 LYS A 141 -1 O MET A 140 N ILE A 118 SHEET 1 AA4 5 THR B 82 TYR B 85 0 SHEET 2 AA4 5 ARG B 69 ASP B 76 -1 N VAL B 72 O TYR B 85 SHEET 3 AA4 5 ILE B 280 SER B 287 -1 O LEU B 285 N GLY B 71 SHEET 4 AA4 5 ARG B 266 TRP B 273 -1 N ALA B 270 O ILE B 282 SHEET 5 AA4 5 VAL B 253 ALA B 260 -1 N GLY B 255 O ILE B 271 SHEET 1 AA5 2 PHE B 91 ALA B 92 0 SHEET 2 AA5 2 THR B 203 SER B 204 -1 O SER B 204 N PHE B 91 SHEET 1 AA6 2 VAL B 117 ILE B 118 0 SHEET 2 AA6 2 MET B 140 LYS B 141 -1 O MET B 140 N ILE B 118 LINK C ALA A 94 N 1X6 A 95 1555 1555 1.32 LINK C 1X6 A 95 N THR A 96 1555 1555 1.33 LINK C ALA B 94 N 1X6 B 95 1555 1555 1.33 LINK C 1X6 B 95 N THR B 96 1555 1555 1.33 CISPEP 1 GLU A 189 THR A 190 0 4.24 CISPEP 2 GLU B 189 THR B 190 0 -1.54 SITE 1 AC1 5 THR A 121 LYS A 122 SER B 87 ASN B 88 SITE 2 AC1 5 HOH B 521 SITE 1 AC2 4 GLU A 172 ASP A 186 ASN A 276 HOH A 562 SITE 1 AC3 7 ASP A 67 LYS A 173 HIS A 177 ASP A 289 SITE 2 AC3 7 GLU A 290 HOH A 559 HOH A 634 SITE 1 AC4 4 GLU A 225 GLU A 302 GLU A 305 HOH A 520 SITE 1 AC5 7 1X6 A 95 SER A 153 THR A 239 SER A 258 SITE 2 AC5 7 GLY A 259 ARG A 266 TYR A 295 SITE 1 AC6 4 GLY A 198 PRO A 249 THR A 250 HOH A 522 SITE 1 AC7 3 TYR A 85 ARG A 86 LYS B 164 SITE 1 AC8 7 ALA A 195 ILE A 196 PRO A 197 GLY A 198 SITE 2 AC8 7 ASP A 199 THR A 203 HOH A 533 SITE 1 AC9 6 SER A 110 ASP A 112 TYR A 295 ASP A 296 SITE 2 AC9 6 ASN A 297 HOH A 569 SITE 1 AD1 7 1X6 B 95 SER B 153 LYS B 257 SER B 258 SITE 2 AD1 7 GLY B 259 ALA B 260 ARG B 266 CRYST1 42.728 43.643 72.404 85.08 88.25 86.68 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023404 -0.001359 -0.000603 0.00000 SCALE2 0.000000 0.022952 -0.001938 0.00000 SCALE3 0.000000 0.000000 0.013867 0.00000