HEADER REPLICATION, VIRAL PROTEIN 10-MAR-20 6W4B TITLE THE CRYSTAL STRUCTURE OF NSP9 RNA BINDING PROTEIN OF SARS COV-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 9; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NSP9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV, SARS-COV2, COVID-19 VIRUS; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL-21 MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS REPLICASE, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 2 INFECTIOUS DISEASES, CSGID, REPLICATION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,Y.KIM,R.JEDRZEJCZAK,N.MALTSEVA,M.ENDRES,K.MICHALSKA, AUTHOR 2 A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 4 18-OCT-23 6W4B 1 REMARK REVDAT 3 06-MAY-20 6W4B 1 COMPND SOURCE DBREF SEQADV REVDAT 2 25-MAR-20 6W4B 1 TITLE SOURCE REVDAT 1 18-MAR-20 6W4B 0 JRNL AUTH K.TAN,Y.KIM,R.JEDRZEJCZAK,N.MALTSEVA,M.ENDRES,K.MICHALSKA, JRNL AUTH 2 A.JOACHIMIAK, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL THE CRYSTAL STRUCTURE OF NSP9 REPLICASE PROTEIN OF COVID-19 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 6932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 341 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.9400 - 3.7200 1.00 3497 168 0.2208 0.2534 REMARK 3 2 3.7200 - 2.9500 0.94 3094 173 0.3149 0.3612 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.515 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.782 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 99.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 123.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1717 REMARK 3 ANGLE : 0.697 2336 REMARK 3 CHIRALITY : 0.039 274 REMARK 3 PLANARITY : 0.005 299 REMARK 3 DIHEDRAL : 14.766 616 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.4401 -6.3458 20.6581 REMARK 3 T TENSOR REMARK 3 T11: 1.2351 T22: 0.8317 REMARK 3 T33: 1.4654 T12: 0.0751 REMARK 3 T13: -0.1710 T23: -0.0995 REMARK 3 L TENSOR REMARK 3 L11: 5.8845 L22: 8.7425 REMARK 3 L33: 3.8882 L12: 3.1720 REMARK 3 L13: 5.0477 L23: 0.5404 REMARK 3 S TENSOR REMARK 3 S11: -0.9792 S12: -0.3840 S13: 0.8383 REMARK 3 S21: 0.0776 S22: -0.2112 S23: -2.3585 REMARK 3 S31: -0.9557 S32: 0.2518 S33: 0.7777 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.4218 -10.5932 25.3464 REMARK 3 T TENSOR REMARK 3 T11: 0.7921 T22: 0.6477 REMARK 3 T33: 1.1738 T12: 0.0367 REMARK 3 T13: -0.0561 T23: -0.0804 REMARK 3 L TENSOR REMARK 3 L11: 2.3724 L22: 8.8262 REMARK 3 L33: 6.2031 L12: 1.6507 REMARK 3 L13: 0.0824 L23: 1.4811 REMARK 3 S TENSOR REMARK 3 S11: 0.2561 S12: -0.6849 S13: 0.3478 REMARK 3 S21: 0.7509 S22: -0.2316 S23: -0.9494 REMARK 3 S31: -0.3705 S32: 0.3996 S33: -0.3389 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3867 -15.0938 21.9794 REMARK 3 T TENSOR REMARK 3 T11: 0.6861 T22: 0.5188 REMARK 3 T33: 0.7561 T12: 0.0936 REMARK 3 T13: 0.1436 T23: -0.1071 REMARK 3 L TENSOR REMARK 3 L11: 7.1095 L22: 4.3002 REMARK 3 L33: 6.6222 L12: 3.4972 REMARK 3 L13: 4.6464 L23: -0.7436 REMARK 3 S TENSOR REMARK 3 S11: 0.4454 S12: 0.1976 S13: 1.0322 REMARK 3 S21: 0.3773 S22: -0.8621 S23: -0.9181 REMARK 3 S31: 0.6077 S32: -0.1885 S33: 0.2253 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8122 -22.4230 29.5695 REMARK 3 T TENSOR REMARK 3 T11: 1.3874 T22: 1.5465 REMARK 3 T33: 1.5068 T12: -0.1379 REMARK 3 T13: 0.1059 T23: 0.3220 REMARK 3 L TENSOR REMARK 3 L11: 4.2890 L22: 4.0808 REMARK 3 L33: -0.0046 L12: -4.2173 REMARK 3 L13: -0.1156 L23: 0.1385 REMARK 3 S TENSOR REMARK 3 S11: 0.2554 S12: -2.4861 S13: 0.0119 REMARK 3 S21: 1.5221 S22: 2.4550 S23: 0.9703 REMARK 3 S31: 2.3625 S32: -3.2260 S33: -1.1001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6312 -19.3269 6.0607 REMARK 3 T TENSOR REMARK 3 T11: 1.1143 T22: 1.1494 REMARK 3 T33: 1.0943 T12: -0.2836 REMARK 3 T13: -0.2767 T23: 0.2934 REMARK 3 L TENSOR REMARK 3 L11: 5.1528 L22: 3.0807 REMARK 3 L33: 4.5612 L12: -0.0946 REMARK 3 L13: -4.2843 L23: 1.7082 REMARK 3 S TENSOR REMARK 3 S11: 0.8447 S12: 1.8941 S13: -0.2939 REMARK 3 S21: -2.0700 S22: 0.4259 S23: 1.0788 REMARK 3 S31: 1.4566 S32: -2.1043 S33: -0.9769 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2053 -28.5771 18.0218 REMARK 3 T TENSOR REMARK 3 T11: 2.5103 T22: 1.3194 REMARK 3 T33: 2.0062 T12: -0.0532 REMARK 3 T13: -0.5183 T23: 0.3824 REMARK 3 L TENSOR REMARK 3 L11: 9.4507 L22: 4.2433 REMARK 3 L33: 2.0321 L12: -6.2862 REMARK 3 L13: 3.9640 L23: -2.5678 REMARK 3 S TENSOR REMARK 3 S11: -1.7470 S12: -0.6335 S13: -1.9049 REMARK 3 S21: -0.8522 S22: 2.2525 S23: 2.9706 REMARK 3 S31: 0.0535 S32: 0.9471 S33: -0.1309 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4062 -18.5954 9.1552 REMARK 3 T TENSOR REMARK 3 T11: 0.9618 T22: 1.3031 REMARK 3 T33: 1.6919 T12: -0.0393 REMARK 3 T13: -0.1770 T23: 0.3051 REMARK 3 L TENSOR REMARK 3 L11: 9.3958 L22: 4.2654 REMARK 3 L33: 5.0777 L12: 4.5542 REMARK 3 L13: -1.0371 L23: 1.1926 REMARK 3 S TENSOR REMARK 3 S11: 0.1213 S12: 0.4883 S13: 0.1488 REMARK 3 S21: 0.1128 S22: 0.8635 S23: 3.1232 REMARK 3 S31: -0.0036 S32: -1.0274 S33: -1.1840 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9325 -9.6863 6.0273 REMARK 3 T TENSOR REMARK 3 T11: 0.8254 T22: 0.8806 REMARK 3 T33: 1.7572 T12: 0.3632 REMARK 3 T13: 0.3500 T23: 0.4200 REMARK 3 L TENSOR REMARK 3 L11: 5.7793 L22: 8.6831 REMARK 3 L33: 6.6764 L12: 4.2806 REMARK 3 L13: 3.2009 L23: -2.9601 REMARK 3 S TENSOR REMARK 3 S11: 1.1549 S12: 0.2257 S13: 1.6214 REMARK 3 S21: 0.0181 S22: -0.8632 S23: 0.5079 REMARK 3 S31: -0.4759 S32: 0.6059 S33: 0.0455 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7548 -10.2640 11.7105 REMARK 3 T TENSOR REMARK 3 T11: 0.6170 T22: 0.7562 REMARK 3 T33: 1.5363 T12: 0.0067 REMARK 3 T13: 0.1855 T23: 0.1340 REMARK 3 L TENSOR REMARK 3 L11: 3.0770 L22: 8.8524 REMARK 3 L33: 8.1447 L12: -1.7143 REMARK 3 L13: 3.2035 L23: -2.7333 REMARK 3 S TENSOR REMARK 3 S11: 0.3888 S12: 0.5582 S13: 1.9648 REMARK 3 S21: -0.1574 S22: -0.1152 S23: 0.8660 REMARK 3 S31: 0.2106 S32: -0.6903 S33: -0.5393 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 6 THROUGH 81 OR REMARK 3 (RESID 82 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 83 REMARK 3 THROUGH 84 OR (RESID 85 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 86 THROUGH 113 OR REMARK 3 (RESID 114 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )))) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 6 THROUGH 25 OR REMARK 3 (RESID 26 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 27 REMARK 3 THROUGH 35 OR (RESID 36 THROUGH 37 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 38 THROUGH 55 OR REMARK 3 (RESID 56 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 57 REMARK 3 THROUGH 114)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6W4B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247599. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97919 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7299 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.19000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.75300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1UW7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M DI-AMMONIUM HYDROGEN CITRATE, REMARK 280 0.1 M SODIUM ACETATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.19567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.39133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.29350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 110.48917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.09783 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.19567 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 88.39133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 110.48917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 66.29350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 22.09783 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 3 REMARK 465 GLU A 4 REMARK 465 LEU A 5 REMARK 465 SER B -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 26 CG OD1 OD2 REMARK 470 THR A 36 OG1 CG2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 ARG A 56 CG CD NE CZ NH1 NH2 REMARK 470 ASN B -1 CG OD1 ND2 REMARK 470 ASN B 2 CG OD1 ND2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 LEU B 5 CG CD1 CD2 REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 LYS B 85 CD CE NZ REMARK 470 GLN B 114 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 80 O GLY A 83 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 26 -131.19 53.53 REMARK 500 LYS A 37 -131.55 40.57 REMARK 500 LYS A 53 -35.69 -136.07 REMARK 500 LYS A 82 39.04 -94.05 REMARK 500 ALA B 0 -103.99 55.64 REMARK 500 ASP B 26 120.91 -38.66 REMARK 500 ASP B 27 66.69 36.27 REMARK 500 LYS B 53 -32.15 -134.03 REMARK 500 LYS B 82 39.22 -92.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP51000 RELATED DB: TARGETTRACK DBREF 6W4B A 2 114 UNP P0DTD1 R1AB_SARS2 4141 4253 DBREF 6W4B B 2 114 UNP P0DTD1 R1AB_SARS2 4141 4253 SEQADV 6W4B SER A -2 UNP P0DTD1 EXPRESSION TAG SEQADV 6W4B ASN A -1 UNP P0DTD1 EXPRESSION TAG SEQADV 6W4B ALA A 0 UNP P0DTD1 EXPRESSION TAG SEQADV 6W4B MET A 1 UNP P0DTD1 EXPRESSION TAG SEQADV 6W4B SER B -2 UNP P0DTD1 EXPRESSION TAG SEQADV 6W4B ASN B -1 UNP P0DTD1 EXPRESSION TAG SEQADV 6W4B ALA B 0 UNP P0DTD1 EXPRESSION TAG SEQADV 6W4B MET B 1 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 117 SER ASN ALA MET ASN ASN GLU LEU SER PRO VAL ALA LEU SEQRES 2 A 117 ARG GLN MET SER CYS ALA ALA GLY THR THR GLN THR ALA SEQRES 3 A 117 CYS THR ASP ASP ASN ALA LEU ALA TYR TYR ASN THR THR SEQRES 4 A 117 LYS GLY GLY ARG PHE VAL LEU ALA LEU LEU SER ASP LEU SEQRES 5 A 117 GLN ASP LEU LYS TRP ALA ARG PHE PRO LYS SER ASP GLY SEQRES 6 A 117 THR GLY THR ILE TYR THR GLU LEU GLU PRO PRO CYS ARG SEQRES 7 A 117 PHE VAL THR ASP THR PRO LYS GLY PRO LYS VAL LYS TYR SEQRES 8 A 117 LEU TYR PHE ILE LYS GLY LEU ASN ASN LEU ASN ARG GLY SEQRES 9 A 117 MET VAL LEU GLY SER LEU ALA ALA THR VAL ARG LEU GLN SEQRES 1 B 117 SER ASN ALA MET ASN ASN GLU LEU SER PRO VAL ALA LEU SEQRES 2 B 117 ARG GLN MET SER CYS ALA ALA GLY THR THR GLN THR ALA SEQRES 3 B 117 CYS THR ASP ASP ASN ALA LEU ALA TYR TYR ASN THR THR SEQRES 4 B 117 LYS GLY GLY ARG PHE VAL LEU ALA LEU LEU SER ASP LEU SEQRES 5 B 117 GLN ASP LEU LYS TRP ALA ARG PHE PRO LYS SER ASP GLY SEQRES 6 B 117 THR GLY THR ILE TYR THR GLU LEU GLU PRO PRO CYS ARG SEQRES 7 B 117 PHE VAL THR ASP THR PRO LYS GLY PRO LYS VAL LYS TYR SEQRES 8 B 117 LEU TYR PHE ILE LYS GLY LEU ASN ASN LEU ASN ARG GLY SEQRES 9 B 117 MET VAL LEU GLY SER LEU ALA ALA THR VAL ARG LEU GLN HELIX 1 AA1 ASN A 96 VAL A 111 1 16 HELIX 2 AA2 ASN B 96 VAL B 111 1 16 SHEET 1 AA1 7 THR A 65 GLU A 69 0 SHEET 2 AA1 7 TRP A 54 PRO A 58 -1 N PHE A 57 O ILE A 66 SHEET 3 AA1 7 LEU A 10 GLY A 18 -1 O GLY A 18 N TRP A 54 SHEET 4 AA1 7 THR A 25 THR A 35 -1 O ALA A 31 N MET A 13 SHEET 5 AA1 7 ARG A 40 SER A 47 -1 O LEU A 43 N TYR A 32 SHEET 6 AA1 7 LYS A 85 PHE A 91 -1 O TYR A 90 N LEU A 45 SHEET 7 AA1 7 CYS A 74 THR A 78 -1 N THR A 78 O LYS A 85 SHEET 1 AA2 7 THR B 65 GLU B 69 0 SHEET 2 AA2 7 TRP B 54 PRO B 58 -1 N PHE B 57 O ILE B 66 SHEET 3 AA2 7 LEU B 10 GLY B 18 -1 O GLY B 18 N TRP B 54 SHEET 4 AA2 7 THR B 25 ASN B 34 -1 O ALA B 31 N MET B 13 SHEET 5 AA2 7 PHE B 41 SER B 47 -1 O LEU B 43 N TYR B 32 SHEET 6 AA2 7 LYS B 85 PHE B 91 -1 O TYR B 90 N LEU B 45 SHEET 7 AA2 7 CYS B 74 THR B 78 -1 N CYS B 74 O LEU B 89 CRYST1 89.883 89.883 132.587 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011126 0.006423 0.000000 0.00000 SCALE2 0.000000 0.012847 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007542 0.00000