HEADER OXIDOREDUCTASE 10-MAR-20 6W4C TITLE CRYSTAL STRUCTURE OF HAO1 IN COMPLEX WITH INDAZOLE ACID INHIBITOR - TITLE 2 COMPOUND 5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYACID OXIDASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HAOX1,GLYCOLATE OXIDASE,GOX; COMPND 5 EC: 1.1.3.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HAO1, GOX1, HAOX1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.D.FERGUSON REVDAT 4 18-OCT-23 6W4C 1 REMARK REVDAT 3 09-JUN-21 6W4C 1 JRNL REVDAT 2 19-MAY-21 6W4C 1 JRNL REVDAT 1 12-MAY-21 6W4C 0 JRNL AUTH E.C.Y.LEE,A.J.MCRINER,K.E.GEORGIADIS,J.LIU,Z.WANG, JRNL AUTH 2 A.D.FERGUSON,B.LEVIN,M.VON RECHENBERG,C.D.HUPP,M.I.MONTEIRO, JRNL AUTH 3 A.D.KEEFE,A.OLSZEWSKI,C.J.EYERMANN,P.CENTRELLA,Y.LIU, JRNL AUTH 4 S.ARORA,J.W.CUOZZO,Y.ZHANG,M.A.CLARK,C.HUGUET,A.KOHLMANN JRNL TITL DISCOVERY OF NOVEL, POTENT INHIBITORS OF HYDROXY ACID JRNL TITL 2 OXIDASE 1 (HAO1) USING DNA-ENCODED CHEMICAL LIBRARY JRNL TITL 3 SCREENING. JRNL REF J.MED.CHEM. V. 64 6730 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 33955740 JRNL DOI 10.1021/ACS.JMEDCHEM.0C02271 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1890 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2626 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE SET COUNT : 147 REMARK 3 BIN FREE R VALUE : 0.2120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2612 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 203 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.74000 REMARK 3 B22 (A**2) : -0.74000 REMARK 3 B33 (A**2) : 1.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.752 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2783 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2689 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3776 ; 1.370 ; 1.653 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6200 ; 1.329 ; 1.597 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 346 ; 6.146 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;28.690 ;20.922 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 494 ;13.990 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;15.950 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 354 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3223 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 594 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6W4C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37879 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 38.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.840 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6W44 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS HCL PH 8.5, 25 %(V/V) PEG REMARK 280 550 MME, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 48.53950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.53950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.31300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 48.53950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.53950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.31300 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 48.53950 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 48.53950 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 40.31300 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 48.53950 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 48.53950 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 40.31300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 2 REMARK 465 LYS A 176 REMARK 465 LEU A 177 REMARK 465 PRO A 178 REMARK 465 PRO A 179 REMARK 465 GLN A 180 REMARK 465 LEU A 181 REMARK 465 ARG A 182 REMARK 465 MET A 183 REMARK 465 GLU A 187 REMARK 465 THR A 188 REMARK 465 SER A 189 REMARK 465 THR A 190 REMARK 465 LEU A 191 REMARK 465 SER A 192 REMARK 465 PHE A 193 REMARK 465 SER A 194 REMARK 465 PRO A 195 REMARK 465 GLU A 196 REMARK 465 GLU A 197 REMARK 465 ASN A 198 REMARK 465 PHE A 199 REMARK 465 GLY A 200 REMARK 465 ASP A 201 REMARK 465 ASP A 202 REMARK 465 SER A 203 REMARK 465 ASN A 363 REMARK 465 PRO A 364 REMARK 465 LEU A 365 REMARK 465 ALA A 366 REMARK 465 VAL A 367 REMARK 465 SER A 368 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 32 -123.92 54.52 REMARK 500 ASN A 56 94.17 77.11 REMARK 500 ASN A 56 94.17 60.98 REMARK 500 PRO A 74 45.37 -85.43 REMARK 500 TRP A 110 58.30 -110.42 REMARK 500 ARG A 174 -135.57 57.12 REMARK 500 ASN A 185 12.87 -143.76 REMARK 500 GLN A 264 -98.11 -104.65 REMARK 500 GLN A 324 43.45 -162.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SL7 A 402 DBREF 6W4C A 1 368 UNP Q9UJM8 HAOX1_HUMAN 1 368 SEQRES 1 A 368 MET LEU PRO ARG LEU ILE CYS ILE ASN ASP TYR GLU GLN SEQRES 2 A 368 HIS ALA LYS SER VAL LEU PRO LYS SER ILE TYR ASP TYR SEQRES 3 A 368 TYR ARG SER GLY ALA ASN ASP GLU GLU THR LEU ALA ASP SEQRES 4 A 368 ASN ILE ALA ALA PHE SER ARG TRP LYS LEU TYR PRO ARG SEQRES 5 A 368 MET LEU ARG ASN VAL ALA GLU THR ASP LEU SER THR SER SEQRES 6 A 368 VAL LEU GLY GLN ARG VAL SER MET PRO ILE CYS VAL GLY SEQRES 7 A 368 ALA THR ALA MET GLN ARG MET ALA HIS VAL ASP GLY GLU SEQRES 8 A 368 LEU ALA THR VAL ARG ALA CYS GLN SER LEU GLY THR GLY SEQRES 9 A 368 MET MET LEU SER SER TRP ALA THR SER SER ILE GLU GLU SEQRES 10 A 368 VAL ALA GLU ALA GLY PRO GLU ALA LEU ARG TRP LEU GLN SEQRES 11 A 368 LEU TYR ILE TYR LYS ASP ARG GLU VAL THR LYS LYS LEU SEQRES 12 A 368 VAL ARG GLN ALA GLU LYS MET GLY TYR LYS ALA ILE PHE SEQRES 13 A 368 VAL THR VAL ASP THR PRO TYR LEU GLY ASN ARG LEU ASP SEQRES 14 A 368 ASP VAL ARG ASN ARG PHE LYS LEU PRO PRO GLN LEU ARG SEQRES 15 A 368 MET LYS ASN PHE GLU THR SER THR LEU SER PHE SER PRO SEQRES 16 A 368 GLU GLU ASN PHE GLY ASP ASP SER GLY LEU ALA ALA TYR SEQRES 17 A 368 VAL ALA LYS ALA ILE ASP PRO SER ILE SER TRP GLU ASP SEQRES 18 A 368 ILE LYS TRP LEU ARG ARG LEU THR SER LEU PRO ILE VAL SEQRES 19 A 368 ALA LYS GLY ILE LEU ARG GLY ASP ASP ALA ARG GLU ALA SEQRES 20 A 368 VAL LYS HIS GLY LEU ASN GLY ILE LEU VAL SER ASN HIS SEQRES 21 A 368 GLY ALA ARG GLN LEU ASP GLY VAL PRO ALA THR ILE ASP SEQRES 22 A 368 VAL LEU PRO GLU ILE VAL GLU ALA VAL GLU GLY LYS VAL SEQRES 23 A 368 GLU VAL PHE LEU ASP GLY GLY VAL ARG LYS GLY THR ASP SEQRES 24 A 368 VAL LEU LYS ALA LEU ALA LEU GLY ALA LYS ALA VAL PHE SEQRES 25 A 368 VAL GLY ARG PRO ILE VAL TRP GLY LEU ALA PHE GLN GLY SEQRES 26 A 368 GLU LYS GLY VAL GLN ASP VAL LEU GLU ILE LEU LYS GLU SEQRES 27 A 368 GLU PHE ARG LEU ALA MET ALA LEU SER GLY CYS GLN ASN SEQRES 28 A 368 VAL LYS VAL ILE ASP LYS THR LEU VAL ARG LYS ASN PRO SEQRES 29 A 368 LEU ALA VAL SER HET FMN A 401 31 HET SL7 A 402 29 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM SL7 5-[[3-[3-(DIMETHYLAMINO)-1,2,4-OXADIAZOL-5-YL]-2- HETNAM 2 SL7 OXIDANYL-PHENYL]METHYLAMINO]-2~{H}-INDAZOLE-3- HETNAM 3 SL7 CARBOXYLIC ACID HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 SL7 C19 H18 N6 O4 FORMUL 4 HOH *203(H2 O) HELIX 1 AA1 CYS A 7 LEU A 19 1 13 HELIX 2 AA2 PRO A 20 SER A 29 1 10 HELIX 3 AA3 GLU A 34 TRP A 47 1 14 HELIX 4 AA4 MET A 82 ALA A 86 5 5 HELIX 5 AA5 ASP A 89 GLY A 102 1 14 HELIX 6 AA6 SER A 114 GLY A 122 1 9 HELIX 7 AA7 ASP A 136 MET A 150 1 15 HELIX 8 AA8 ARG A 167 ARG A 174 1 8 HELIX 9 AA9 LEU A 205 ILE A 213 1 9 HELIX 10 AB1 SER A 218 THR A 229 1 12 HELIX 11 AB2 ARG A 240 HIS A 250 1 11 HELIX 12 AB3 ASN A 259 ARG A 263 5 5 HELIX 13 AB4 ALA A 270 GLU A 283 1 14 HELIX 14 AB5 LYS A 296 LEU A 306 1 11 HELIX 15 AB6 GLY A 314 GLY A 348 1 35 HELIX 16 AB7 ASN A 351 ILE A 355 5 5 HELIX 17 AB8 ASP A 356 THR A 358 5 3 SHEET 1 AA1 2 LYS A 48 LEU A 49 0 SHEET 2 AA1 2 VAL A 360 ARG A 361 -1 O ARG A 361 N LYS A 48 SHEET 1 AA2 2 THR A 64 VAL A 66 0 SHEET 2 AA2 2 GLN A 69 VAL A 71 -1 O GLN A 69 N VAL A 66 SHEET 1 AA3 9 ILE A 75 VAL A 77 0 SHEET 2 AA3 9 GLY A 104 LEU A 107 1 O GLY A 104 N VAL A 77 SHEET 3 AA3 9 LEU A 126 LEU A 131 1 O GLN A 130 N LEU A 107 SHEET 4 AA3 9 ILE A 155 THR A 158 1 O PHE A 156 N LEU A 129 SHEET 5 AA3 9 ILE A 233 ILE A 238 1 O LYS A 236 N VAL A 157 SHEET 6 AA3 9 GLY A 254 VAL A 257 1 O LEU A 256 N ALA A 235 SHEET 7 AA3 9 GLU A 287 LEU A 290 1 O PHE A 289 N ILE A 255 SHEET 8 AA3 9 ALA A 310 VAL A 313 1 O PHE A 312 N LEU A 290 SHEET 9 AA3 9 ILE A 75 VAL A 77 1 N CYS A 76 O VAL A 311 SITE 1 AC1 24 TYR A 26 TYR A 27 ALA A 79 THR A 80 SITE 2 AC1 24 ALA A 81 SER A 108 GLN A 130 TYR A 132 SITE 3 AC1 24 THR A 158 LYS A 236 SER A 258 HIS A 260 SITE 4 AC1 24 GLY A 261 ARG A 263 ASP A 291 GLY A 292 SITE 5 AC1 24 GLY A 293 ARG A 295 GLY A 314 ARG A 315 SITE 6 AC1 24 SL7 A 402 HOH A 547 HOH A 578 HOH A 589 SITE 1 AC2 17 SER A 22 TYR A 26 ALA A 81 MET A 82 SITE 2 AC2 17 MET A 85 TRP A 110 TYR A 132 ARG A 167 SITE 3 AC2 17 ASP A 170 ARG A 174 PHE A 175 GLY A 204 SITE 4 AC2 17 ALA A 206 VAL A 209 HIS A 260 ARG A 263 SITE 5 AC2 17 FMN A 401 CRYST1 97.079 97.079 80.626 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010301 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012403 0.00000