HEADER PROTEIN BINDING 13-MAR-20 6W5Q TITLE STRUCTURE OF THE GLOBULAR C-TERMINAL DOMAIN OF P. AERUGINOSA LPOP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN SYNTHASE ACTIVATOR LPOP; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 SYNONYM: TPR_REGION DOMAIN-CONTAINING PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA4699; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIPOPROTEIN, ACTIVATOR, CELL WALL, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR N.A.CAVENEY,C.S.ROBB,J.P.SIMORRE,N.C.J.STRYNADKA REVDAT 3 18-OCT-23 6W5Q 1 REMARK REVDAT 2 10-JUN-20 6W5Q 1 JRNL REVDAT 1 06-MAY-20 6W5Q 0 JRNL AUTH N.A.CAVENEY,A.J.F.EGAN,I.AYALA,C.LAGURI,C.S.ROBB,E.BREUKINK, JRNL AUTH 2 W.VOLLMER,N.C.J.STRYNADKA,J.P.SIMORRE JRNL TITL STRUCTURE OF THE PEPTIDOGLYCAN SYNTHASE ACTIVATOR LPOP IN JRNL TITL 2 PSEUDOMONAS AERUGINOSA. JRNL REF STRUCTURE V. 28 643 2020 JRNL REFN ISSN 0969-2126 JRNL PMID 32320673 JRNL DOI 10.1016/J.STR.2020.03.012 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 39858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.550 REMARK 3 FREE R VALUE TEST SET COUNT : 1414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7570 - 4.7385 0.97 3870 138 0.1760 0.2060 REMARK 3 2 4.7385 - 3.7615 0.98 3827 135 0.1556 0.1815 REMARK 3 3 3.7615 - 3.2861 0.98 3830 146 0.1812 0.2362 REMARK 3 4 3.2861 - 2.9857 0.99 3879 147 0.2016 0.2351 REMARK 3 5 2.9857 - 2.7718 0.99 3865 142 0.2096 0.2578 REMARK 3 6 2.7718 - 2.6083 0.98 3811 140 0.2309 0.2434 REMARK 3 7 2.6083 - 2.4777 0.98 3847 141 0.2446 0.3002 REMARK 3 8 2.4777 - 2.3699 0.99 3829 142 0.2306 0.2563 REMARK 3 9 2.3699 - 2.2786 0.99 3867 141 0.2332 0.2627 REMARK 3 10 2.2786 - 2.2000 0.98 3819 142 0.2692 0.2954 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 6340 REMARK 3 ANGLE : 0.987 8557 REMARK 3 CHIRALITY : 0.047 933 REMARK 3 PLANARITY : 0.011 1168 REMARK 3 DIHEDRAL : 22.697 2402 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6W5Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000246615. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39974 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 48.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.37800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HOMOLOGY MODEL BASED ON 5XW7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (30 MG/ML PURIFIED PROTEIN IN 20 MM REMARK 280 HEPES, PH 8.0, 150 MM NACL) AND 1 UL OF MOTHER LIQUOR (0.1 M REMARK 280 HEPES PH 7.5, 2.5 M AMMONIUM SULFATE, 1% PEG 400, 2.5% 1,2- REMARK 280 BUTANEDIOL), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 77.29200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 144 REMARK 465 ALA A 145 REMARK 465 GLY A 146 REMARK 465 SER A 147 REMARK 465 LEU A 148 REMARK 465 ALA A 149 REMARK 465 ALA A 150 REMARK 465 ASP A 151 REMARK 465 GLU A 152 REMARK 465 GLN A 153 REMARK 465 SER B 144 REMARK 465 ALA B 145 REMARK 465 GLY B 146 REMARK 465 SER B 147 REMARK 465 LEU B 148 REMARK 465 ALA B 149 REMARK 465 ALA B 150 REMARK 465 ASP B 151 REMARK 465 GLU B 152 REMARK 465 GLN B 153 REMARK 465 LEU B 154 REMARK 465 SER B 259 REMARK 465 SER C 144 REMARK 465 ALA C 145 REMARK 465 GLY C 146 REMARK 465 SER C 147 REMARK 465 LEU C 148 REMARK 465 ALA C 149 REMARK 465 ALA C 150 REMARK 465 ASP C 151 REMARK 465 GLU C 152 REMARK 465 GLN C 153 REMARK 465 VAL C 258 REMARK 465 SER C 259 REMARK 465 SER D 144 REMARK 465 ALA D 145 REMARK 465 GLY D 146 REMARK 465 SER D 147 REMARK 465 LEU D 148 REMARK 465 ALA D 149 REMARK 465 ALA D 150 REMARK 465 ASP D 151 REMARK 465 GLU D 152 REMARK 465 GLN D 153 REMARK 465 LEU D 154 REMARK 465 SER E 144 REMARK 465 ALA E 145 REMARK 465 GLY E 146 REMARK 465 SER E 147 REMARK 465 LEU E 148 REMARK 465 ALA E 149 REMARK 465 ALA E 150 REMARK 465 ASP E 151 REMARK 465 GLU E 152 REMARK 465 GLN E 153 REMARK 465 LEU E 154 REMARK 465 SER E 259 REMARK 465 SER F 144 REMARK 465 ALA F 145 REMARK 465 GLY F 146 REMARK 465 SER F 147 REMARK 465 LEU F 148 REMARK 465 ALA F 149 REMARK 465 ALA F 150 REMARK 465 ASP F 151 REMARK 465 GLU F 152 REMARK 465 GLN F 153 REMARK 465 LEU F 154 REMARK 465 LYS F 257 REMARK 465 VAL F 258 REMARK 465 SER F 259 REMARK 465 SER G 144 REMARK 465 ALA G 145 REMARK 465 GLY G 146 REMARK 465 SER G 147 REMARK 465 LEU G 148 REMARK 465 ALA G 149 REMARK 465 ALA G 150 REMARK 465 ASP G 151 REMARK 465 GLU G 152 REMARK 465 ALA G 256 REMARK 465 LYS G 257 REMARK 465 VAL G 258 REMARK 465 SER G 259 REMARK 465 SER H 144 REMARK 465 ALA H 145 REMARK 465 GLY H 146 REMARK 465 SER H 147 REMARK 465 LEU H 148 REMARK 465 ALA H 149 REMARK 465 ALA H 150 REMARK 465 ASP H 151 REMARK 465 GLU H 152 REMARK 465 SER H 259 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG E 197 O HOH E 401 1.75 REMARK 500 NH1 ARG C 186 O3 SO4 C 301 1.81 REMARK 500 O HOH E 401 O HOH H 407 1.93 REMARK 500 OE2 GLU G 212 NH1 ARG G 216 2.06 REMARK 500 OE1 GLN A 193 O HOH A 401 2.07 REMARK 500 NZ LYS E 255 O HOH E 402 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 424 O HOH H 413 2857 2.06 REMARK 500 O HOH A 424 O HOH H 410 2857 2.16 REMARK 500 O HOH C 402 O HOH F 409 1655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG H 190 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 173 76.18 -103.34 REMARK 500 ALA C 188 76.05 -118.58 REMARK 500 ASP C 245 77.87 -115.54 REMARK 500 ALA C 256 1.45 -62.66 REMARK 500 ALA D 188 79.86 -119.22 REMARK 500 ARG D 190 40.03 -109.18 REMARK 500 ASP D 245 77.56 -105.43 REMARK 500 ASP E 245 79.43 -107.97 REMARK 500 ASP G 245 77.76 -105.18 REMARK 500 ARG H 225 74.78 -119.57 REMARK 500 GLN H 243 20.07 -78.02 REMARK 500 ASP H 245 77.78 -113.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 197 0.22 SIDE CHAIN REMARK 500 ARG E 197 0.23 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 415 DISTANCE = 6.99 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE E 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 F 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 F 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 G 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 H 303 DBREF 6W5Q A 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 DBREF 6W5Q B 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 DBREF 6W5Q C 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 DBREF 6W5Q D 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 DBREF 6W5Q E 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 DBREF 6W5Q F 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 DBREF 6W5Q G 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 DBREF 6W5Q H 144 259 UNP Q9HV97 Q9HV97_PSEAE 143 258 SEQRES 1 A 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 A 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 A 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 A 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 A 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 A 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 A 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 A 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 A 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER SEQRES 1 B 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 B 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 B 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 B 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 B 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 B 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 B 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 B 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 B 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER SEQRES 1 C 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 C 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 C 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 C 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 C 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 C 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 C 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 C 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 C 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER SEQRES 1 D 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 D 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 D 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 D 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 D 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 D 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 D 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 D 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 D 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER SEQRES 1 E 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 E 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 E 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 E 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 E 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 E 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 E 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 E 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 E 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER SEQRES 1 F 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 F 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 F 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 F 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 F 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 F 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 F 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 F 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 F 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER SEQRES 1 G 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 G 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 G 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 G 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 G 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 G 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 G 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 G 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 G 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER SEQRES 1 H 116 SER ALA GLY SER LEU ALA ALA ASP GLU GLN LEU ASP GLY SEQRES 2 H 116 PRO VAL LEU ALA MET LEU THR THR ALA GLN GLN GLN GLN SEQRES 3 H 116 GLY SER GLY ASP LEU ASN SER ALA ALA ALA SER LEU GLU SEQRES 4 H 116 ARG ALA GLN ARG ILE ALA PRO ARG GLU PRO GLN VAL LEU SEQRES 5 H 116 TYR ARG LEU ALA GLN VAL ARG LEU ALA GLN GLY ASP ALA SEQRES 6 H 116 ALA GLN ALA GLU GLN VAL ALA ARG ARG GLY LEU SER TYR SEQRES 7 H 116 ALA ASN GLY ARG PRO ALA LEU GLN ALA GLY LEU TRP GLU SEQRES 8 H 116 LEU ILE ALA GLN ALA ARG GLU LYS GLN GLY ASP SER ALA SEQRES 9 H 116 GLY ALA ALA LEU ALA ARG GLN LYS ALA LYS VAL SER HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 C 301 5 HET SO4 C 302 5 HET SO4 D 301 5 HET PGE E 301 10 HET SO4 F 301 5 HET SO4 F 302 5 HET SO4 G 301 5 HET SO4 H 301 5 HET SO4 H 302 5 HET SO4 H 303 5 HETNAM SO4 SULFATE ION HETNAM PGE TRIETHYLENE GLYCOL FORMUL 9 SO4 13(O4 S 2-) FORMUL 16 PGE C6 H14 O4 FORMUL 23 HOH *144(H2 O) HELIX 1 AA1 ASP A 155 GLY A 172 1 18 HELIX 2 AA2 ASP A 173 ALA A 188 1 16 HELIX 3 AA3 GLU A 191 GLN A 205 1 15 HELIX 4 AA4 ASP A 207 ALA A 222 1 16 HELIX 5 AA5 ARG A 225 GLN A 243 1 19 HELIX 6 AA6 ASP A 245 VAL A 258 1 14 HELIX 7 AA7 GLY B 156 SER B 171 1 16 HELIX 8 AA8 ASP B 173 ALA B 188 1 16 HELIX 9 AA9 GLU B 191 GLN B 205 1 15 HELIX 10 AB1 ASP B 207 SER B 220 1 14 HELIX 11 AB2 ARG B 225 GLN B 243 1 19 HELIX 12 AB3 ASP B 245 LYS B 257 1 13 HELIX 13 AB4 ASP C 155 SER C 171 1 17 HELIX 14 AB5 ASP C 173 ALA C 188 1 16 HELIX 15 AB6 GLU C 191 GLY C 206 1 16 HELIX 16 AB7 ASP C 207 ALA C 222 1 16 HELIX 17 AB8 ARG C 225 GLN C 243 1 19 HELIX 18 AB9 ASP C 245 ALA C 256 1 12 HELIX 19 AC1 GLY D 156 SER D 171 1 16 HELIX 20 AC2 ASP D 173 ALA D 188 1 16 HELIX 21 AC3 GLU D 191 GLN D 205 1 15 HELIX 22 AC4 ASP D 207 TYR D 221 1 15 HELIX 23 AC5 ARG D 225 GLN D 243 1 19 HELIX 24 AC6 ASP D 245 VAL D 258 1 14 HELIX 25 AC7 GLY E 156 SER E 171 1 16 HELIX 26 AC8 ASP E 173 GLN E 185 1 13 HELIX 27 AC9 GLU E 191 GLN E 205 1 15 HELIX 28 AD1 ASP E 207 TYR E 221 1 15 HELIX 29 AD2 ARG E 225 GLN E 243 1 19 HELIX 30 AD3 ASP E 245 LYS E 257 1 13 HELIX 31 AD4 GLY F 156 SER F 171 1 16 HELIX 32 AD5 ASP F 173 ALA F 188 1 16 HELIX 33 AD6 GLU F 191 GLN F 205 1 15 HELIX 34 AD7 ASP F 207 SER F 220 1 14 HELIX 35 AD8 ARG F 225 GLN F 243 1 19 HELIX 36 AD9 ASP F 245 ARG F 253 1 9 HELIX 37 AE1 GLN F 254 ALA F 256 5 3 HELIX 38 AE2 LEU G 154 SER G 171 1 18 HELIX 39 AE3 ASP G 173 ALA G 188 1 16 HELIX 40 AE4 GLU G 191 GLY G 206 1 16 HELIX 41 AE5 ASP G 207 TYR G 221 1 15 HELIX 42 AE6 ARG G 225 GLN G 243 1 19 HELIX 43 AE7 ASP G 245 LYS G 255 1 11 HELIX 44 AE8 ASP H 155 SER H 171 1 17 HELIX 45 AE9 ASP H 173 ALA H 188 1 16 HELIX 46 AF1 GLU H 191 GLN H 205 1 15 HELIX 47 AF2 ASP H 207 SER H 220 1 14 HELIX 48 AF3 ARG H 225 GLN H 243 1 19 HELIX 49 AF4 ASP H 245 VAL H 258 1 14 SITE 1 AC1 6 ARG A 183 ARG A 186 GLN C 213 ARG C 216 SITE 2 AC1 6 LEU E 251 HOH E 402 SITE 1 AC2 3 TRP A 233 LYS A 255 HOH A 413 SITE 1 AC3 5 ARG B 183 ARG B 186 GLN D 213 ARG D 216 SITE 2 AC3 5 ARG G 240 SITE 1 AC4 4 ALA B 208 ALA B 209 ASN D 175 HOH D 402 SITE 1 AC5 4 GLN A 213 ARG A 216 ARG C 183 ARG C 186 SITE 1 AC6 6 ARG C 216 TRP C 233 LYS C 255 ARG E 216 SITE 2 AC6 6 TRP E 233 LYS E 255 SITE 1 AC7 5 ASN A 175 HOH A 407 GLY C 206 ALA C 208 SITE 2 AC7 5 ALA C 209 SITE 1 AC8 4 GLN B 213 ARG B 216 ARG D 183 ARG D 186 SITE 1 AC9 8 GLY D 244 SER D 246 HOH D 404 ARG E 225 SITE 2 AC9 8 PRO E 226 ALA E 227 LEU E 228 GLY H 156 SITE 1 AD1 6 ARG C 240 GLN E 213 ARG E 216 ARG F 183 SITE 2 AD1 6 ARG F 186 HOH F 408 SITE 1 AD2 3 ARG E 183 ARG E 186 GLN F 213 SITE 1 AD3 6 ARG D 216 LYS D 255 ARG G 216 TRP G 233 SITE 2 AD3 6 LYS G 255 HOH G 402 SITE 1 AD4 4 ARG G 183 ARG G 186 GLN H 213 ARG H 216 SITE 1 AD5 5 GLN G 213 ARG G 216 ARG H 183 ARG H 186 SITE 2 AD5 5 HOH H 402 SITE 1 AD6 2 ARG H 216 LYS H 255 SITE 1 AD7 6 GLY G 206 ASP G 207 ALA G 208 ALA G 209 SITE 2 AD7 6 ASN H 175 HOH H 403 CRYST1 48.757 154.584 54.083 90.00 90.15 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020510 0.000000 0.000053 0.00000 SCALE2 0.000000 0.006469 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018490 0.00000