HEADER HYDROLASE/DNA/RNA 16-MAR-20 6W62 TITLE CRYO-EM STRUCTURE OF CAS12I-CRRNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAS12I; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CRRNA; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 3 ORGANISM_TAXID: 1410628; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 9 ORGANISM_TAXID: 1410628 KEYWDS CRISPR, HYDROLASE-DNA-RNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR L.CHANG,Z.LI,H.ZHANG REVDAT 3 06-MAR-24 6W62 1 REMARK REVDAT 2 31-MAR-21 6W62 1 JRNL REVDAT 1 16-SEP-20 6W62 0 JRNL AUTH H.ZHANG,Z.LI,R.XIAO,L.CHANG JRNL TITL MECHANISMS FOR TARGET RECOGNITION AND CLEAVAGE BY THE CAS12I JRNL TITL 2 RNA-GUIDED ENDONUCLEASE. JRNL REF NAT.STRUCT.MOL.BIOL. V. 27 1069 2020 JRNL REFN ESSN 1545-9985 JRNL PMID 32895556 JRNL DOI 10.1038/S41594-020-0499-0 REMARK 2 REMARK 2 RESOLUTION. 3.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.900 REMARK 3 NUMBER OF PARTICLES : 122435 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6W62 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000247658. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYO-EM STRUCTURE OF CRISPR-CAS REMARK 245 COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : UNSPECIFIED REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 130.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 LYS A 4 REMARK 465 GLU A 5 REMARK 465 LYS A 6 REMARK 465 PHE A 177 REMARK 465 GLY A 178 REMARK 465 THR A 179 REMARK 465 GLY A 180 REMARK 465 ALA A 181 REMARK 465 LYS A 182 REMARK 465 ASN A 183 REMARK 465 ASN A 184 REMARK 465 ARG A 185 REMARK 465 GLN A 186 REMARK 465 THR A 187 REMARK 465 LYS A 188 REMARK 465 HIS A 189 REMARK 465 GLN A 190 REMARK 465 PHE A 191 REMARK 465 TYR A 192 REMARK 465 SER A 193 REMARK 465 LYS A 194 REMARK 465 VAL A 195 REMARK 465 ILE A 196 REMARK 465 GLN A 197 REMARK 465 LEU A 198 REMARK 465 LEU A 199 REMARK 465 GLU A 200 REMARK 465 GLU A 201 REMARK 465 SER A 202 REMARK 465 THR A 203 REMARK 465 GLN A 204 REMARK 465 ILE A 205 REMARK 465 ASN A 206 REMARK 465 SER A 207 REMARK 465 VAL A 208 REMARK 465 GLU A 209 REMARK 465 GLN A 210 REMARK 465 LEU A 211 REMARK 465 ALA A 212 REMARK 465 SER A 213 REMARK 465 ILE A 214 REMARK 465 ILE A 215 REMARK 465 LEU A 216 REMARK 465 LYS A 217 REMARK 465 ALA A 218 REMARK 465 GLY A 219 REMARK 465 ASP A 220 REMARK 465 CYS A 221 REMARK 465 ASP A 222 REMARK 465 SER A 223 REMARK 465 TYR A 224 REMARK 465 ARG A 225 REMARK 465 LYS A 226 REMARK 465 LEU A 227 REMARK 465 ARG A 228 REMARK 465 ILE A 229 REMARK 465 ARG A 230 REMARK 465 CYS A 231 REMARK 465 SER A 232 REMARK 465 ARG A 233 REMARK 465 LYS A 234 REMARK 465 GLY A 235 REMARK 465 ALA A 236 REMARK 465 THR A 237 REMARK 465 PRO A 238 REMARK 465 SER A 239 REMARK 465 ILE A 240 REMARK 465 LEU A 241 REMARK 465 LYS A 242 REMARK 465 ILE A 243 REMARK 465 VAL A 244 REMARK 465 GLN A 245 REMARK 465 ASP A 246 REMARK 465 TYR A 247 REMARK 465 GLU A 248 REMARK 465 LEU A 249 REMARK 465 GLY A 250 REMARK 465 THR A 251 REMARK 465 ASN A 252 REMARK 465 HIS A 253 REMARK 465 ASP A 254 REMARK 465 ASP A 255 REMARK 465 GLU A 256 REMARK 465 VAL A 257 REMARK 465 ASN A 258 REMARK 465 VAL A 259 REMARK 465 PRO A 260 REMARK 465 SER A 261 REMARK 465 LEU A 262 REMARK 465 ILE A 263 REMARK 465 ALA A 264 REMARK 465 ASN A 265 REMARK 465 LEU A 266 REMARK 465 LYS A 267 REMARK 465 GLU A 268 REMARK 465 LYS A 269 REMARK 465 LEU A 270 REMARK 465 GLY A 271 REMARK 465 ARG A 272 REMARK 465 PHE A 273 REMARK 465 GLU A 274 REMARK 465 TYR A 275 REMARK 465 GLU A 276 REMARK 465 CYS A 277 REMARK 465 GLU A 278 REMARK 465 TRP A 279 REMARK 465 LYS A 280 REMARK 465 CYS A 281 REMARK 465 MET A 282 REMARK 465 GLU A 283 REMARK 465 LYS A 284 REMARK 465 ILE A 285 REMARK 465 LYS A 286 REMARK 465 ALA A 287 REMARK 465 PHE A 288 REMARK 465 LEU A 289 REMARK 465 ALA A 290 REMARK 465 SER A 291 REMARK 465 LYS A 292 REMARK 465 VAL A 293 REMARK 465 GLY A 294 REMARK 465 PRO A 295 REMARK 465 TYR A 296 REMARK 465 TYR A 297 REMARK 465 LEU A 298 REMARK 465 GLY A 299 REMARK 465 PRO A 351 REMARK 465 TYR A 352 REMARK 465 PHE A 353 REMARK 465 GLU A 354 REMARK 465 SER A 355 REMARK 465 ASP A 356 REMARK 465 THR A 357 REMARK 465 ASN A 358 REMARK 465 ASN A 548 REMARK 465 PRO A 549 REMARK 465 PRO A 550 REMARK 465 ASP A 551 REMARK 465 ALA A 552 REMARK 465 LEU A 553 REMARK 465 ALA A 554 REMARK 465 ALA A 555 REMARK 465 ARG A 556 REMARK 465 PHE A 557 REMARK 465 ARG A 558 REMARK 465 THR A 559 REMARK 465 LYS A 560 REMARK 465 THR A 561 REMARK 465 ASN A 562 REMARK 465 GLY A 563 REMARK 465 TYR A 564 REMARK 465 GLU A 565 REMARK 465 GLY A 566 REMARK 465 LYS A 567 REMARK 465 PRO A 568 REMARK 465 ALA A 569 REMARK 465 LEU A 570 REMARK 465 SER A 571 REMARK 465 ALA A 572 REMARK 465 GLU A 573 REMARK 465 GLN A 574 REMARK 465 ILE A 575 REMARK 465 GLU A 576 REMARK 465 GLN A 577 REMARK 465 ILE A 578 REMARK 465 ARG A 579 REMARK 465 SER A 580 REMARK 465 ALA A 581 REMARK 465 PRO A 582 REMARK 465 VAL A 583 REMARK 465 LYS A 824 REMARK 465 PRO A 825 REMARK 465 LYS A 826 REMARK 465 ASN A 827 REMARK 465 SER A 828 REMARK 465 LYS A 829 REMARK 465 SER A 830 REMARK 465 ASP A 831 REMARK 465 VAL A 832 REMARK 465 LYS A 833 REMARK 465 C B -22 REMARK 465 A B -21 REMARK 465 A B -20 REMARK 465 A B -19 REMARK 465 U B -18 REMARK 465 U B -17 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 58 CG OD1 OD2 REMARK 470 THR A 63 OG1 CG2 REMARK 470 ASN A 65 CG OD1 ND2 REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 138 CG CD1 CD2 REMARK 470 LEU A 139 CG CD1 CD2 REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LEU A 142 CG CD1 CD2 REMARK 470 GLN A 143 CG CD OE1 NE2 REMARK 470 LEU A 144 CG CD1 CD2 REMARK 470 SER A 145 OG REMARK 470 ARG A 146 CG CD NE CZ NH1 NH2 REMARK 470 SER A 147 OG REMARK 470 ASP A 148 CG OD1 OD2 REMARK 470 MET A 149 CG SD CE REMARK 470 HIS A 150 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 151 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 TYR A 335 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 336 CG CD OE1 OE2 REMARK 470 ASN A 337 CG OD1 ND2 REMARK 470 GLU A 338 CG CD OE1 OE2 REMARK 470 PRO A 339 CG CD REMARK 470 PHE A 340 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 342 CG CD CE NZ REMARK 470 ILE A 343 CG1 CG2 CD1 REMARK 470 GLU A 345 CG CD OE1 OE2 REMARK 470 PHE A 347 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 348 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 349 CG OD1 OD2 REMARK 470 SER A 350 OG REMARK 470 TYR A 387 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 388 CG CD OE1 OE2 REMARK 470 GLU A 389 CG CD OE1 OE2 REMARK 470 ASP A 390 CG OD1 OD2 REMARK 470 ILE A 391 CG1 CG2 CD1 REMARK 470 SER A 393 OG REMARK 470 LEU A 394 CG CD1 CD2 REMARK 470 SER A 395 OG REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 ASP A 397 CG OD1 OD2 REMARK 470 LYS A 398 CG CD CE NZ REMARK 470 LYS A 399 CG CD CE NZ REMARK 470 GLU A 400 CG CD OE1 OE2 REMARK 470 LYS A 401 CG CD CE NZ REMARK 470 ARG A 402 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 423 CG CD CE NZ REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 LYS A 426 CG CD CE NZ REMARK 470 THR A 427 OG1 CG2 REMARK 470 ASN A 498 CG OD1 ND2 REMARK 470 LEU A 499 CG CD1 CD2 REMARK 470 LYS A 500 CG CD CE NZ REMARK 470 CYS A 501 SG REMARK 470 ASN A 502 CG OD1 ND2 REMARK 470 ARG A 503 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 504 CG OD1 ND2 REMARK 470 GLN A 505 CG CD OE1 NE2 REMARK 470 VAL A 506 CG1 CG2 REMARK 470 LEU A 517 CG CD1 CD2 REMARK 470 ASN A 518 CG OD1 ND2 REMARK 470 THR A 519 OG1 CG2 REMARK 470 LYS A 520 CG CD CE NZ REMARK 470 THR A 521 OG1 CG2 REMARK 470 MET A 522 CG SD CE REMARK 470 ARG A 523 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 524 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 524 CZ3 CH2 REMARK 470 GLU A 547 CG CD OE1 OE2 REMARK 470 LEU A 585 CG CD1 CD2 REMARK 470 ARG A 586 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 601 CG CD OE1 NE2 REMARK 470 ASN A 602 CG OD1 ND2 REMARK 470 LYS A 635 CG CD CE NZ REMARK 470 LYS A 636 CG CD CE NZ REMARK 470 GLU A 637 CG CD OE1 OE2 REMARK 470 LYS A 638 CG CD CE NZ REMARK 470 ASN A 639 CG OD1 ND2 REMARK 470 TYR A 640 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 724 CG OD1 ND2 REMARK 470 THR A 726 OG1 CG2 REMARK 470 MET A 727 CG SD CE REMARK 470 LYS A 728 CG CD CE NZ REMARK 470 ASP A 729 CG OD1 OD2 REMARK 470 ASN A 730 CG OD1 ND2 REMARK 470 ARG A 731 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 733 CG OD1 ND2 REMARK 470 ASN A 734 CG OD1 ND2 REMARK 470 ILE A 735 CG1 CG2 CD1 REMARK 470 GLN A 736 CG CD OE1 NE2 REMARK 470 ILE A 737 CG1 CG2 CD1 REMARK 470 ASP A 738 CG OD1 OD2 REMARK 470 PHE A 739 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 743 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 746 CG1 CG2 CD1 REMARK 470 ASP A 748 CG OD1 OD2 REMARK 470 ASP A 749 CG OD1 OD2 REMARK 470 GLU A 750 CG CD OE1 OE2 REMARK 470 THR A 751 OG1 CG2 REMARK 470 SER A 752 OG REMARK 470 LEU A 753 CG CD1 CD2 REMARK 470 TYR A 754 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 755 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 953 CG CD CE NZ REMARK 470 ASN A 954 CG OD1 ND2 REMARK 470 PRO A 955 CG CD REMARK 470 GLU A 956 CG CD OE1 OE2 REMARK 470 ASN A 957 CG OD1 ND2 REMARK 470 ASP A 985 CG OD1 OD2 REMARK 470 PRO A 987 CG CD REMARK 470 SER A 988 OG REMARK 470 LYS A 989 CG CD CE NZ REMARK 470 LEU A1004 CG CD1 CD2 REMARK 470 THR A1006 OG1 CG2 REMARK 470 TYR A1007 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A1009 CG CD1 CD2 REMARK 470 LYS A1010 CG CD CE NZ REMARK 470 LYS A1011 CG CD CE NZ REMARK 470 ASN A1012 CG OD1 ND2 REMARK 470 ASP A1013 CG OD1 OD2 REMARK 470 VAL A1014 CG1 CG2 REMARK 470 LEU A1015 CG CD1 CD2 REMARK 470 VAL A1017 CG1 CG2 REMARK 470 SER A1018 OG REMARK 470 LEU A1019 CG CD1 CD2 REMARK 470 GLU A1020 CG CD OE1 OE2 REMARK 470 LYS A1021 CG CD CE NZ REMARK 470 PHE A1022 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A1023 CG CD CE NZ REMARK 470 GLN A1024 CG CD OE1 NE2 REMARK 470 ILE A1025 CG1 CG2 CD1 REMARK 470 MET A1026 CG SD CE REMARK 470 ASN A1028 CG OD1 ND2 REMARK 470 ILE A1029 CG1 CG2 CD1 REMARK 470 LEU A1030 CG CD1 CD2 REMARK 470 HIS A1031 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A1032 CG CD OE1 NE2 REMARK 470 ARG A1033 CG CD NE CZ NH1 NH2 REMARK 470 SER A1034 OG REMARK 470 GLU A1035 CG CD OE1 OE2 REMARK 470 ASP A1036 CG OD1 OD2 REMARK 470 GLN A1037 CG CD OE1 NE2 REMARK 470 ASP A1089 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 987 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 17 -179.71 -69.46 REMARK 500 ASP A 58 -4.40 75.32 REMARK 500 PRO A 89 5.97 -68.56 REMARK 500 TYR A 335 -1.98 70.23 REMARK 500 GLU A 396 -166.54 -78.63 REMARK 500 SER A 490 176.91 83.56 REMARK 500 GLN A 505 -38.57 -133.59 REMARK 500 VAL A 506 141.93 -170.88 REMARK 500 TYR A 541 41.43 -100.63 REMARK 500 LYS A 611 64.76 60.53 REMARK 500 ARG A 620 -62.78 -94.11 REMARK 500 ASN A 622 32.24 -96.81 REMARK 500 ARG A 652 152.65 175.94 REMARK 500 TYR A 671 -64.35 -93.20 REMARK 500 SER A 699 17.72 -141.42 REMARK 500 LEU A 705 16.26 58.89 REMARK 500 ASN A 724 -179.94 -179.05 REMARK 500 ASP A 742 14.11 -141.56 REMARK 500 ALA A 747 35.46 -99.12 REMARK 500 ASN A 770 -60.17 -91.78 REMARK 500 LEU A 791 55.75 -94.76 REMARK 500 THR A 900 14.47 52.91 REMARK 500 TRP A 915 25.09 46.01 REMARK 500 PHE A 950 -6.06 74.82 REMARK 500 LYS A 953 13.53 58.63 REMARK 500 LYS A1011 -38.92 -38.19 REMARK 500 SER A1018 65.06 61.20 REMARK 500 ARG A1043 -60.76 -94.03 REMARK 500 MET A1046 -168.52 -103.21 REMARK 500 PHE A1047 60.90 64.73 REMARK 500 ALA A1056 -5.81 74.86 REMARK 500 LEU A1083 16.72 51.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-21551 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-21541 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-21552 RELATED DB: EMDB DBREF 6W62 A 1 1093 PDB 6W62 6W62 1 1093 DBREF 6W62 B -22 7 PDB 6W62 6W62 -22 7 SEQRES 1 A 1093 MET SER ASN LYS GLU LYS ASN ALA SER GLU THR ARG LYS SEQRES 2 A 1093 ALA TYR THR THR LYS MET ILE PRO ARG SER HIS ASP ARG SEQRES 3 A 1093 MET LYS LEU LEU GLY ASN PHE MET ASP TYR LEU MET ASP SEQRES 4 A 1093 GLY THR PRO ILE PHE PHE GLU LEU TRP ASN GLN PHE GLY SEQRES 5 A 1093 GLY GLY ILE ASP ARG ASP ILE ILE SER GLY THR ALA ASN SEQRES 6 A 1093 LYS ASP LYS ILE SER ASP ASP LEU LEU LEU ALA VAL ASN SEQRES 7 A 1093 TRP PHE LYS VAL MET PRO ILE ASN SER LYS PRO GLN GLY SEQRES 8 A 1093 VAL SER PRO SER ASN LEU ALA ASN LEU PHE GLN GLN TYR SEQRES 9 A 1093 SER GLY SER GLU PRO ASP ILE GLN ALA GLN GLU TYR PHE SEQRES 10 A 1093 ALA SER ASN PHE ASP THR GLU LYS HIS GLN TRP LYS ASP SEQRES 11 A 1093 MET ARG VAL GLU TYR GLU ARG LEU LEU ALA GLU LEU GLN SEQRES 12 A 1093 LEU SER ARG SER ASP MET HIS HIS ASP LEU LYS LEU MET SEQRES 13 A 1093 TYR LYS GLU LYS CYS ILE GLY LEU SER LEU SER THR ALA SEQRES 14 A 1093 HIS TYR ILE THR SER VAL MET PHE GLY THR GLY ALA LYS SEQRES 15 A 1093 ASN ASN ARG GLN THR LYS HIS GLN PHE TYR SER LYS VAL SEQRES 16 A 1093 ILE GLN LEU LEU GLU GLU SER THR GLN ILE ASN SER VAL SEQRES 17 A 1093 GLU GLN LEU ALA SER ILE ILE LEU LYS ALA GLY ASP CYS SEQRES 18 A 1093 ASP SER TYR ARG LYS LEU ARG ILE ARG CYS SER ARG LYS SEQRES 19 A 1093 GLY ALA THR PRO SER ILE LEU LYS ILE VAL GLN ASP TYR SEQRES 20 A 1093 GLU LEU GLY THR ASN HIS ASP ASP GLU VAL ASN VAL PRO SEQRES 21 A 1093 SER LEU ILE ALA ASN LEU LYS GLU LYS LEU GLY ARG PHE SEQRES 22 A 1093 GLU TYR GLU CYS GLU TRP LYS CYS MET GLU LYS ILE LYS SEQRES 23 A 1093 ALA PHE LEU ALA SER LYS VAL GLY PRO TYR TYR LEU GLY SEQRES 24 A 1093 SER TYR SER ALA MET LEU GLU ASN ALA LEU SER PRO ILE SEQRES 25 A 1093 LYS GLY MET THR THR LYS ASN CYS LYS PHE VAL LEU LYS SEQRES 26 A 1093 GLN ILE ASP ALA LYS ASN ASP ILE LYS TYR GLU ASN GLU SEQRES 27 A 1093 PRO PHE GLY LYS ILE VAL GLU GLY PHE PHE ASP SER PRO SEQRES 28 A 1093 TYR PHE GLU SER ASP THR ASN VAL LYS TRP VAL LEU HIS SEQRES 29 A 1093 PRO HIS HIS ILE GLY GLU SER ASN ILE LYS THR LEU TRP SEQRES 30 A 1093 GLU ASP LEU ASN ALA ILE HIS SER LYS TYR GLU GLU ASP SEQRES 31 A 1093 ILE ALA SER LEU SER GLU ASP LYS LYS GLU LYS ARG ILE SEQRES 32 A 1093 LYS VAL TYR GLN GLY ASP VAL CYS GLN THR ILE ASN THR SEQRES 33 A 1093 TYR CYS GLU GLU VAL GLY LYS GLU ALA LYS THR PRO LEU SEQRES 34 A 1093 VAL GLN LEU LEU ARG TYR LEU TYR SER ARG LYS ASP ASP SEQRES 35 A 1093 ILE ALA VAL ASP LYS ILE ILE ASP GLY ILE THR PHE LEU SEQRES 36 A 1093 SER LYS LYS HIS LYS VAL GLU LYS GLN LYS ILE ASN PRO SEQRES 37 A 1093 VAL ILE GLN LYS TYR PRO SER PHE ASN PHE GLY ASN ASN SEQRES 38 A 1093 SER LYS LEU LEU GLY LYS ILE ILE SER PRO LYS ASP LYS SEQRES 39 A 1093 LEU LYS HIS ASN LEU LYS CYS ASN ARG ASN GLN VAL ASP SEQRES 40 A 1093 ASN TYR ILE TRP ILE GLU ILE LYS VAL LEU ASN THR LYS SEQRES 41 A 1093 THR MET ARG TRP GLU LYS HIS HIS TYR ALA LEU SER SER SEQRES 42 A 1093 THR ARG PHE LEU GLU GLU VAL TYR TYR PRO ALA THR SER SEQRES 43 A 1093 GLU ASN PRO PRO ASP ALA LEU ALA ALA ARG PHE ARG THR SEQRES 44 A 1093 LYS THR ASN GLY TYR GLU GLY LYS PRO ALA LEU SER ALA SEQRES 45 A 1093 GLU GLN ILE GLU GLN ILE ARG SER ALA PRO VAL GLY LEU SEQRES 46 A 1093 ARG LYS VAL LYS LYS ARG GLN MET ARG LEU GLU ALA ALA SEQRES 47 A 1093 ARG GLN GLN ASN LEU LEU PRO ARG TYR THR TRP GLY LYS SEQRES 48 A 1093 ASP PHE ASN ILE ASN ILE CYS LYS ARG GLY ASN ASN PHE SEQRES 49 A 1093 GLU VAL THR LEU ALA THR LYS VAL LYS LYS LYS LYS GLU SEQRES 50 A 1093 LYS ASN TYR LYS VAL VAL LEU GLY TYR ASP ALA ASN ILE SEQRES 51 A 1093 VAL ARG LYS ASN THR TYR ALA ALA ILE GLU ALA HIS ALA SEQRES 52 A 1093 ASN GLY ASP GLY VAL ILE ASP TYR ASN ASP LEU PRO VAL SEQRES 53 A 1093 LYS PRO ILE GLU SER GLY PHE VAL THR VAL GLU SER GLN SEQRES 54 A 1093 VAL ARG ASP LYS SER TYR ASP GLN LEU SER TYR ASN GLY SEQRES 55 A 1093 VAL LYS LEU LEU TYR CYS LYS PRO HIS VAL GLU SER ARG SEQRES 56 A 1093 ARG SER PHE LEU GLU LYS TYR ARG ASN GLY THR MET LYS SEQRES 57 A 1093 ASP ASN ARG GLY ASN ASN ILE GLN ILE ASP PHE MET LYS SEQRES 58 A 1093 ASP PHE GLU ALA ILE ALA ASP ASP GLU THR SER LEU TYR SEQRES 59 A 1093 TYR PHE ASN MET LYS TYR CYS LYS LEU LEU GLN SER SER SEQRES 60 A 1093 ILE ARG ASN HIS SER SER GLN ALA LYS GLU TYR ARG GLU SEQRES 61 A 1093 GLU ILE PHE GLU LEU LEU ARG ASP GLY LYS LEU SER VAL SEQRES 62 A 1093 LEU LYS LEU SER SER LEU SER ASN LEU SER PHE VAL MET SEQRES 63 A 1093 PHE LYS VAL ALA LYS SER LEU ILE GLY THR TYR PHE GLY SEQRES 64 A 1093 HIS LEU LEU LYS LYS PRO LYS ASN SER LYS SER ASP VAL SEQRES 65 A 1093 LYS ALA PRO PRO ILE THR ASP GLU ASP LYS GLN LYS ALA SEQRES 66 A 1093 ASP PRO GLU MET PHE ALA LEU ARG LEU ALA LEU GLU GLU SEQRES 67 A 1093 LYS ARG LEU ASN LYS VAL LYS SER LYS LYS GLU VAL ILE SEQRES 68 A 1093 ALA ASN LYS ILE VAL ALA LYS ALA LEU GLU LEU ARG ASP SEQRES 69 A 1093 LYS TYR GLY PRO VAL LEU ILE LYS GLY GLU ASN ILE SER SEQRES 70 A 1093 ASP THR THR LYS LYS GLY LYS LYS SER SER THR ASN SER SEQRES 71 A 1093 PHE LEU MET ASP TRP LEU ALA ARG GLY VAL ALA ASN LYS SEQRES 72 A 1093 VAL LYS GLU MET VAL MET MET HIS GLN GLY LEU GLU PHE SEQRES 73 A 1093 VAL GLU VAL ASN PRO ASN PHE THR SER HIS GLN ASP PRO SEQRES 74 A 1093 PHE VAL HIS LYS ASN PRO GLU ASN THR PHE ARG ALA ARG SEQRES 75 A 1093 TYR SER ARG CYS THR PRO SER GLU LEU THR GLU LYS ASN SEQRES 76 A 1093 ARG LYS GLU ILE LEU SER PHE LEU SER ASP LYS PRO SER SEQRES 77 A 1093 LYS ARG PRO THR ASN ALA TYR TYR ASN GLU GLY ALA MET SEQRES 78 A 1093 ALA PHE LEU ALA THR TYR GLY LEU LYS LYS ASN ASP VAL SEQRES 79 A 1093 LEU GLY VAL SER LEU GLU LYS PHE LYS GLN ILE MET ALA SEQRES 80 A 1093 ASN ILE LEU HIS GLN ARG SER GLU ASP GLN LEU LEU PHE SEQRES 81 A 1093 PRO SER ARG GLY GLY MET PHE TYR LEU ALA THR TYR LYS SEQRES 82 A 1093 LEU ASP ALA ASP ALA THR SER VAL ASN TRP ASN GLY LYS SEQRES 83 A 1093 GLN PHE TRP VAL CYS ASN ALA ASP LEU VAL ALA ALA TYR SEQRES 84 A 1093 ASN VAL GLY LEU VAL ASP ILE GLN LYS ASP PHE LYS LYS SEQRES 85 A 1093 LYS SEQRES 1 B 30 C A A A U U G U G C C C A SEQRES 2 B 30 U C G U U G G C A C G C G SEQRES 3 B 30 U G C A HELIX 1 AA1 SER A 23 GLY A 54 1 32 HELIX 2 AA2 SER A 70 PHE A 80 1 11 HELIX 3 AA3 ASN A 96 TYR A 104 1 9 HELIX 4 AA4 ASP A 110 ALA A 118 1 9 HELIX 5 AA5 ARG A 132 LEU A 142 1 11 HELIX 6 AA6 SER A 145 GLU A 159 1 15 HELIX 7 AA7 THR A 168 MET A 176 1 9 HELIX 8 AA8 TYR A 301 ASN A 307 1 7 HELIX 9 AA9 ALA A 308 ASN A 331 1 24 HELIX 10 AB1 ASN A 337 GLY A 346 1 10 HELIX 11 AB2 HIS A 364 ILE A 368 5 5 HELIX 12 AB3 ASN A 372 SER A 393 1 22 HELIX 13 AB4 LYS A 398 LYS A 423 1 26 HELIX 14 AB5 LEU A 429 ARG A 439 1 11 HELIX 15 AB6 ASP A 446 GLU A 462 1 17 HELIX 16 AB7 SER A 490 LYS A 500 1 11 HELIX 17 AB8 SER A 533 VAL A 540 1 8 HELIX 18 AB9 LEU A 585 ASN A 602 1 18 HELIX 19 AC1 CYS A 708 LYS A 721 1 14 HELIX 20 AC2 ASP A 742 ILE A 746 5 5 HELIX 21 AC3 SER A 752 HIS A 771 1 20 HELIX 22 AC4 SER A 772 TYR A 778 5 7 HELIX 23 AC5 ARG A 779 ARG A 787 1 9 HELIX 24 AC6 LEU A 802 LEU A 822 1 21 HELIX 25 AC7 THR A 838 ASP A 846 1 9 HELIX 26 AC8 ASP A 846 TYR A 886 1 41 HELIX 27 AC9 LYS A 905 ASP A 914 1 10 HELIX 28 AD1 LEU A 916 MET A 929 1 14 HELIX 29 AD2 THR A 967 LEU A 971 5 5 HELIX 30 AD3 THR A 972 LEU A 983 1 12 HELIX 31 AD4 ARG A 990 GLY A 1008 1 19 HELIX 32 AD5 LYS A 1010 LEU A 1015 1 6 HELIX 33 AD6 SER A 1018 ARG A 1033 1 16 HELIX 34 AD7 ASN A 1072 GLY A 1082 1 11 HELIX 35 AD8 ASP A 1085 PHE A 1090 1 6 SHEET 1 AA1 3 THR A 11 LYS A 13 0 SHEET 2 AA1 3 ALA A 629 VAL A 632 -1 O VAL A 632 N THR A 11 SHEET 3 AA1 3 PHE A 613 ASN A 614 -1 N ASN A 614 O ALA A 629 SHEET 1 AA2 2 LYS A 81 PRO A 84 0 SHEET 2 AA2 2 HIS A 126 LYS A 129 -1 O LYS A 129 N LYS A 81 SHEET 1 AA3 4 PHE A 478 GLY A 479 0 SHEET 2 AA3 4 LEU A 484 ILE A 488 1 O LEU A 484 N GLY A 479 SHEET 3 AA3 4 ILE A 510 ASN A 518 -1 O GLU A 513 N LYS A 487 SHEET 4 AA3 4 ARG A 523 LEU A 531 -1 O HIS A 527 N ILE A 514 SHEET 1 AA4 4 PRO A 678 PHE A 683 0 SHEET 2 AA4 4 THR A 655 GLU A 660 -1 N TYR A 656 O GLY A 682 SHEET 3 AA4 4 VAL A 642 TYR A 646 -1 N GLY A 645 O ALA A 657 SHEET 4 AA4 4 VAL A 889 LEU A 890 1 O LEU A 890 N VAL A 642 SHEET 1 AA5 2 SER A 688 GLN A 689 0 SHEET 2 AA5 2 SER A 694 TYR A 695 -1 O TYR A 695 N SER A 688 SHEET 1 AA6 2 TYR A 963 CYS A 966 0 SHEET 2 AA6 2 LEU A1038 PRO A1041 -1 O LEU A1038 N CYS A 966 SHEET 1 AA7 3 LEU A1049 ALA A1050 0 SHEET 2 AA7 3 PHE A1068 VAL A1070 -1 O TRP A1069 N ALA A1050 SHEET 3 AA7 3 THR A1059 VAL A1061 -1 N THR A1059 O VAL A1070 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000