HEADER TRANSFERASE 16-MAR-20 6W6B TITLE THE X-RAY CRYSTAL STRUCTURE OF THE C-TERMINUS DOMAIN OF STAPHYLOCOCCUS TITLE 2 AUREUS FATTY ACID KINASE A (FAKA, RESIDUES 328-548) PROTEIN TO 1.40 TITLE 3 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAFAKA-CTERMINUS DOMAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINUS DOMAIN OF SAFAKA (RESIDUES 328-548) ONLY IN THIS COMPND 5 STRUCTURE; COMPND 6 SYNONYM: DAK2 DOMAIN-CONTAINING PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: C7P97_10220, CSC83_01045, CSC87_04070; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FATTY ACID KINASE A, PHOSPHORYLATION, FATTY ACID, C-TERMINUS DOMAIN, KEYWDS 2 LIGASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,C.SUBRAMANIAN,C.O.ROCK,S.W.WHITE REVDAT 2 06-MAR-24 6W6B 1 REMARK REVDAT 1 17-MAR-21 6W6B 0 JRNL AUTH M.G.CUYPERS,C.SUBRAMANIAN,C.O.ROCK,S.W.WHITE JRNL TITL THE X-RAY CRYSTAL STRUCTURE OF THE C-TERMINUS DOMAIN OF JRNL TITL 2 STAPHYLOCOCCUS AUREUS FATTY ACID KINASE A (FAKA, RESIDUES JRNL TITL 3 328-548) PROTEIN TO 1.40 ANGSTROM RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 68164 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.120 REMARK 3 R VALUE (WORKING SET) : 0.119 REMARK 3 FREE R VALUE : 0.149 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3512 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5160 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 251 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1771 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 405 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -0.22000 REMARK 3 B12 (A**2) : 0.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.038 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.039 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.366 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.984 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.977 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1920 ; 0.026 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1731 ; 0.007 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2620 ; 2.216 ; 1.627 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4066 ; 1.704 ; 1.571 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 249 ; 5.841 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;34.830 ;27.229 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;14.171 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;32.912 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 270 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2135 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 311 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3650 ;15.314 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6W6B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247630. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 7.0.078 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71679 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 75.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.97200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL2MAP 0.4.E-BETA REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M LI2SO4, 1.4M (NH4)2SO4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.52067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.04133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.04133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.52067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -239.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -57.04133 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 605 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1050 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 308 REMARK 465 GLY A 309 REMARK 465 SER A 310 REMARK 465 SER A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 465 HIS A 314 REMARK 465 HIS A 315 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 316 ND1 CD2 CE1 NE2 REMARK 470 ARG A 324 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 439 O HOH A 701 1.71 REMARK 500 O HOH A 740 O HOH A 890 2.00 REMARK 500 O1 SO4 A 611 O HOH A 702 2.04 REMARK 500 NZ LYS A 434 O HOH A 703 2.09 REMARK 500 OD1 ASP A 439 ND2 ASN A 443 2.14 REMARK 500 O HOH A 703 O HOH A 710 2.16 REMARK 500 O HOH A 1008 O HOH A 1041 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 497 CD GLU A 497 OE1 0.087 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 388 122.96 -175.67 REMARK 500 ASP A 466 -13.12 90.66 REMARK 500 ILE A 540 -42.03 74.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1093 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1094 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A1095 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A1096 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A1097 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A1098 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A1099 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A1100 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH A1101 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A1102 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH A1103 DISTANCE = 7.63 ANGSTROMS REMARK 525 HOH A1104 DISTANCE = 10.31 ANGSTROMS REMARK 525 HOH A1105 DISTANCE = 11.67 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 611 DBREF1 6W6B A 328 548 UNP A0A2S6DS72_STAAU DBREF2 6W6B A A0A2S6DS72 328 548 SEQADV 6W6B MET A 308 UNP A0A2S6DS7 INITIATING METHIONINE SEQADV 6W6B GLY A 309 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B SER A 310 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B SER A 311 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B HIS A 312 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B HIS A 313 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B HIS A 314 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B HIS A 315 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B HIS A 316 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B HIS A 317 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B SER A 318 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B SER A 319 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B GLY A 320 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B LEU A 321 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B VAL A 322 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B PRO A 323 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B ARG A 324 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B GLY A 325 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B SER A 326 UNP A0A2S6DS7 EXPRESSION TAG SEQADV 6W6B HIS A 327 UNP A0A2S6DS7 EXPRESSION TAG SEQRES 1 A 241 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 241 LEU VAL PRO ARG GLY SER HIS MET GLU THR VAL GLU THR SEQRES 3 A 241 ALA ILE ILE THR ILE SER MET GLY GLU GLY ILE SER GLU SEQRES 4 A 241 ILE PHE LYS SER MET GLY ALA THR HIS ILE ILE SER GLY SEQRES 5 A 241 GLY GLN THR MET ASN PRO SER THR GLU ASP ILE VAL LYS SEQRES 6 A 241 VAL ILE GLU GLN SER LYS CYS LYS ARG ALA ILE ILE LEU SEQRES 7 A 241 PRO ASN ASN LYS ASN ILE LEU MET ALA SER GLU GLN ALA SEQRES 8 A 241 ALA SER ILE VAL ASP ALA GLU ALA VAL VAL ILE PRO THR SEQRES 9 A 241 LYS SER ILE PRO GLN GLY ILE SER ALA LEU PHE GLN TYR SEQRES 10 A 241 ASP VAL ASP ALA THR LEU GLU GLU ASN LYS ALA GLN MET SEQRES 11 A 241 ALA ASP SER VAL ASN ASN VAL LYS SER GLY SER LEU THR SEQRES 12 A 241 TYR ALA VAL ARG ASP THR LYS ILE ASP GLY VAL GLU ILE SEQRES 13 A 241 LYS LYS ASP ALA PHE MET GLY LEU ILE GLU ASP LYS ILE SEQRES 14 A 241 VAL SER SER GLN SER ASP GLN LEU THR THR VAL THR GLU SEQRES 15 A 241 LEU LEU ASN GLU MET LEU ALA GLU ASP SER GLU ILE LEU SEQRES 16 A 241 THR VAL ILE ILE GLY GLN ASP ALA GLU GLN ALA VAL THR SEQRES 17 A 241 ASP ASN MET ILE ASN TRP ILE GLU GLU GLN TYR PRO ASP SEQRES 18 A 241 VAL GLU VAL GLU VAL HIS GLU GLY GLY GLN PRO ILE TYR SEQRES 19 A 241 GLN TYR PHE PHE SER VAL GLU HET SO4 A 601 5 HET SO4 A 602 5 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET SO4 A 606 5 HET SO4 A 607 5 HET SO4 A 608 5 HET SO4 A 609 5 HET SO4 A 610 5 HET SO4 A 611 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 11(O4 S 2-) FORMUL 13 HOH *405(H2 O) HELIX 1 AA1 ILE A 344 MET A 351 1 8 HELIX 2 AA2 SER A 366 SER A 377 1 12 HELIX 3 AA3 ASN A 388 ASN A 390 5 3 HELIX 4 AA4 ILE A 391 VAL A 402 1 12 HELIX 5 AA5 SER A 413 GLN A 423 1 11 HELIX 6 AA6 THR A 429 VAL A 444 1 16 HELIX 7 AA7 ASP A 482 LEU A 495 1 14 HELIX 8 AA8 GLU A 511 TYR A 526 1 16 SHEET 1 AA1 4 HIS A 355 SER A 358 0 SHEET 2 AA1 4 THR A 333 SER A 339 1 N SER A 339 O ILE A 357 SHEET 3 AA1 4 ARG A 381 LEU A 385 1 O LEU A 385 N ILE A 336 SHEET 4 AA1 4 GLU A 405 VAL A 408 1 O VAL A 407 N ILE A 384 SHEET 1 AA2 6 LYS A 475 GLN A 480 0 SHEET 2 AA2 6 PHE A 468 ILE A 472 -1 N GLY A 470 O SER A 478 SHEET 3 AA2 6 LYS A 445 TYR A 451 -1 N SER A 448 O LEU A 471 SHEET 4 AA2 6 TYR A 543 VAL A 547 -1 O PHE A 545 N GLY A 447 SHEET 5 AA2 6 ILE A 501 ILE A 506 -1 N THR A 503 O SER A 546 SHEET 6 AA2 6 GLU A 530 GLU A 535 1 O GLU A 530 N LEU A 502 SHEET 1 AA3 2 THR A 456 ILE A 458 0 SHEET 2 AA3 2 VAL A 461 ILE A 463 -1 O VAL A 461 N ILE A 458 SITE 1 AC1 6 ASN A 364 ASN A 388 ASN A 390 HOH A 709 SITE 2 AC1 6 HOH A 777 HOH A 808 SITE 1 AC2 7 SER A 339 GLY A 341 GLU A 342 GLY A 343 SITE 2 AC2 7 ILE A 344 SER A 345 HOH A 707 SITE 1 AC3 6 LYS A 475 ALA A 496 GLU A 497 TYR A 526 SITE 2 AC3 6 HOH A 853 HOH A 946 SITE 1 AC4 5 GLU A 511 GLN A 512 HOH A 720 HOH A 726 SITE 2 AC4 5 HOH A 750 SITE 1 AC5 2 GLN A 480 SER A 481 SITE 1 AC6 7 VAL A 407 VAL A 408 LYS A 434 HOH A 715 SITE 2 AC6 7 HOH A 769 HOH A 835 HOH A 879 SITE 1 AC7 3 SER A 326 HIS A 327 LYS A 349 SITE 1 AC8 3 SER A 318 PRO A 323 HOH A 737 SITE 1 AC9 2 LYS A 372 HOH A 728 SITE 1 AD1 3 ASN A 517 HOH A 821 HOH A 932 SITE 1 AD2 4 GLU A 332 HOH A 702 HOH A 796 HOH A 899 CRYST1 87.303 87.303 85.562 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011454 0.006613 0.000000 0.00000 SCALE2 0.000000 0.013226 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011687 0.00000