HEADER IMMUNE SYSTEM 23-MAR-20 6W9G TITLE CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF HUMANIZED 5C8 ANTIBODY TITLE 2 CONTAINING THE FLUORESCENT NON-CANONICAL AMINO ACID L-(7- TITLE 3 HYDROXYCOUMARIN-4-YL)ETHYLGLYCINE IN COMPLEX WITH CD40L AT PH 6.8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CD40 LIGAND; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: CD40-L,T-CELL ANTIGEN GP39,TNF-RELATED ACTIVATION PROTEIN, COMPND 5 TRAP,TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 5; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5C8* FAB (HEAVY CHAIN); COMPND 9 CHAIN: H, K, X; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 5C8* FAB (LIGHT CHAIN); COMPND 13 CHAIN: L, M, Y; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD40LG, CD40L, TNFSF5, TRAP; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 644223; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNOGLOBULIN, CYTOKINE, L-(7-HYDROXYCOUMARIN-4-YL)ETHYLGLYCINE, KEYWDS 2 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.N.HENDERSON,C.R.SIMMONS,J.H.MILLS REVDAT 4 16-OCT-24 6W9G 1 REMARK REVDAT 3 15-NOV-23 6W9G 1 LINK REVDAT 2 18-OCT-23 6W9G 1 REMARK REVDAT 1 23-DEC-20 6W9G 0 JRNL AUTH J.N.HENDERSON,C.R.SIMMONS,N.E.FAHMI,J.W.JEFFS,C.R.BORGES, JRNL AUTH 2 J.H.MILLS JRNL TITL STRUCTURAL INSIGHTS INTO HOW PROTEIN ENVIRONMENTS TUNE THE JRNL TITL 2 SPECTROSCOPIC PROPERTIES OF A NONCANONICAL AMINO ACID JRNL TITL 3 FLUOROPHORE. JRNL REF BIOCHEMISTRY V. 59 3401 2020 JRNL REFN ISSN 0006-2960 JRNL PMID 32845612 JRNL DOI 10.1021/ACS.BIOCHEM.0C00474 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 221486 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 11697 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 16478 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE SET COUNT : 874 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12782 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 446 REMARK 3 SOLVENT ATOMS : 1238 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.92000 REMARK 3 B22 (A**2) : -0.47000 REMARK 3 B33 (A**2) : 0.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.967 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13915 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 12751 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 19012 ; 1.893 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 29530 ; 0.989 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1775 ; 8.069 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 533 ;38.326 ;24.634 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2088 ;14.512 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 47 ;20.966 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2201 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 15480 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 3039 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 261 REMARK 3 ORIGIN FOR THE GROUP (A): -28.7691 -55.9869 12.5883 REMARK 3 T TENSOR REMARK 3 T11: 0.0439 T22: 0.0191 REMARK 3 T33: 0.1115 T12: -0.0008 REMARK 3 T13: 0.0041 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 2.1274 L22: 1.5765 REMARK 3 L33: 3.1261 L12: -0.5975 REMARK 3 L13: 0.5624 L23: -1.1097 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: -0.1339 S13: 0.1477 REMARK 3 S21: 0.1389 S22: 0.0504 S23: -0.0137 REMARK 3 S31: -0.3395 S32: -0.0301 S33: -0.0830 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 301 A 306 REMARK 3 ORIGIN FOR THE GROUP (A): -33.1385 -37.4883 21.3609 REMARK 3 T TENSOR REMARK 3 T11: 0.2789 T22: 0.2019 REMARK 3 T33: 0.5023 T12: 0.0170 REMARK 3 T13: 0.0484 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 3.1363 L22: 1.4386 REMARK 3 L33: 6.0289 L12: -1.2257 REMARK 3 L13: -2.0560 L23: 2.9199 REMARK 3 S TENSOR REMARK 3 S11: 0.2781 S12: 0.1505 S13: 0.5201 REMARK 3 S21: -0.2643 S22: -0.0657 S23: -0.1729 REMARK 3 S31: -0.4961 S32: -0.1023 S33: -0.2124 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 119 B 261 REMARK 3 ORIGIN FOR THE GROUP (A): -34.6292 -77.1841 12.8430 REMARK 3 T TENSOR REMARK 3 T11: 0.0174 T22: 0.0223 REMARK 3 T33: 0.1318 T12: 0.0063 REMARK 3 T13: -0.0292 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.0806 L22: 1.4415 REMARK 3 L33: 3.1334 L12: 0.5121 REMARK 3 L13: -1.4623 L23: -0.2250 REMARK 3 S TENSOR REMARK 3 S11: 0.0472 S12: -0.1406 S13: -0.0500 REMARK 3 S21: 0.0499 S22: 0.0168 S23: -0.1045 REMARK 3 S31: 0.1319 S32: 0.2395 S33: -0.0640 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 301 B 306 REMARK 3 ORIGIN FOR THE GROUP (A): -16.3601 -82.5122 21.2673 REMARK 3 T TENSOR REMARK 3 T11: 0.1228 T22: 0.6187 REMARK 3 T33: 0.5880 T12: 0.1320 REMARK 3 T13: -0.1065 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 9.1510 L22: 3.4929 REMARK 3 L33: 4.7184 L12: 5.0185 REMARK 3 L13: 6.1986 L23: 2.7840 REMARK 3 S TENSOR REMARK 3 S11: 0.3799 S12: 1.4286 S13: -1.4390 REMARK 3 S21: 0.2027 S22: 0.2838 S23: -1.1114 REMARK 3 S31: 0.2299 S32: 1.3727 S33: -0.6637 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 119 C 261 REMARK 3 ORIGIN FOR THE GROUP (A): -50.1981 -61.5662 12.8557 REMARK 3 T TENSOR REMARK 3 T11: 0.0144 T22: 0.0473 REMARK 3 T33: 0.1291 T12: -0.0078 REMARK 3 T13: 0.0142 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 1.0830 L22: 2.4098 REMARK 3 L33: 2.7798 L12: -0.0280 REMARK 3 L13: 0.6687 L23: 1.1900 REMARK 3 S TENSOR REMARK 3 S11: 0.0631 S12: -0.1084 S13: -0.0892 REMARK 3 S21: 0.1472 S22: 0.0341 S23: 0.1765 REMARK 3 S31: 0.1399 S32: -0.3030 S33: -0.0972 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 301 C 306 REMARK 3 ORIGIN FOR THE GROUP (A): -63.7745 -74.7271 21.3976 REMARK 3 T TENSOR REMARK 3 T11: 0.1836 T22: 0.2021 REMARK 3 T33: 0.4371 T12: 0.0175 REMARK 3 T13: 0.0214 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 5.6250 L22: 13.4899 REMARK 3 L33: 3.7696 L12: 8.1890 REMARK 3 L13: -3.5000 L23: -3.5156 REMARK 3 S TENSOR REMARK 3 S11: -0.3304 S12: 0.2344 S13: 0.3425 REMARK 3 S21: -0.8406 S22: 0.1283 S23: 0.9061 REMARK 3 S31: -0.1522 S32: -0.3624 S33: 0.2021 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 117 REMARK 3 ORIGIN FOR THE GROUP (A): -6.5942 -68.1331 31.8946 REMARK 3 T TENSOR REMARK 3 T11: 0.0461 T22: 0.3790 REMARK 3 T33: 0.0588 T12: 0.0194 REMARK 3 T13: -0.0164 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 4.8203 L22: 1.3388 REMARK 3 L33: 2.6389 L12: -0.7688 REMARK 3 L13: -0.6580 L23: -0.5752 REMARK 3 S TENSOR REMARK 3 S11: -0.0678 S12: -0.7886 S13: -0.1659 REMARK 3 S21: 0.1588 S22: 0.0022 S23: 0.0121 REMARK 3 S31: 0.1306 S32: 0.4056 S33: 0.0656 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 118 H 218 REMARK 3 ORIGIN FOR THE GROUP (A): 26.2984 -79.5958 37.8317 REMARK 3 T TENSOR REMARK 3 T11: 0.2431 T22: 0.6750 REMARK 3 T33: 0.2434 T12: 0.1841 REMARK 3 T13: -0.0222 T23: 0.1093 REMARK 3 L TENSOR REMARK 3 L11: 6.3941 L22: 1.1930 REMARK 3 L33: 1.9105 L12: 0.6920 REMARK 3 L13: -1.8267 L23: -0.8823 REMARK 3 S TENSOR REMARK 3 S11: -0.0625 S12: -0.8056 S13: -0.1858 REMARK 3 S21: 0.2833 S22: 0.2303 S23: -0.1851 REMARK 3 S31: -0.1488 S32: -0.1539 S33: -0.1678 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 114 REMARK 3 ORIGIN FOR THE GROUP (A): 4.4405 -64.1069 12.5190 REMARK 3 T TENSOR REMARK 3 T11: 0.0052 T22: 0.0991 REMARK 3 T33: 0.0608 T12: -0.0015 REMARK 3 T13: -0.0170 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 4.0619 L22: 0.8135 REMARK 3 L33: 1.0575 L12: -0.1217 REMARK 3 L13: -0.2199 L23: 0.0098 REMARK 3 S TENSOR REMARK 3 S11: -0.0205 S12: -0.3182 S13: 0.0871 REMARK 3 S21: 0.0218 S22: 0.0457 S23: -0.0281 REMARK 3 S31: -0.0026 S32: 0.0821 S33: -0.0252 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 115 L 215 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2262 -89.0852 24.6319 REMARK 3 T TENSOR REMARK 3 T11: 0.1924 T22: 0.4054 REMARK 3 T33: 0.3908 T12: 0.0640 REMARK 3 T13: 0.0081 T23: 0.2271 REMARK 3 L TENSOR REMARK 3 L11: 1.7060 L22: 3.4172 REMARK 3 L33: 4.5971 L12: -0.5938 REMARK 3 L13: 0.4874 L23: -2.2412 REMARK 3 S TENSOR REMARK 3 S11: -0.0985 S12: -0.6395 S13: -0.6739 REMARK 3 S21: 0.0221 S22: 0.2388 S23: 0.0128 REMARK 3 S31: 0.7345 S32: -0.1852 S33: -0.1402 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 1 K 117 REMARK 3 ORIGIN FOR THE GROUP (A): -56.6152 -90.3785 31.8215 REMARK 3 T TENSOR REMARK 3 T11: 0.1331 T22: 0.0932 REMARK 3 T33: 0.0831 T12: -0.0917 REMARK 3 T13: 0.0295 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 2.8498 L22: 3.0540 REMARK 3 L33: 2.1004 L12: 1.8097 REMARK 3 L13: -0.5078 L23: 0.2199 REMARK 3 S TENSOR REMARK 3 S11: 0.1716 S12: -0.1984 S13: 0.2177 REMARK 3 S21: 0.4252 S22: -0.2252 S23: 0.2530 REMARK 3 S31: 0.1379 S32: -0.1952 S33: 0.0536 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 118 K 219 REMARK 3 ORIGIN FOR THE GROUP (A): -83.4947-112.5159 37.9263 REMARK 3 T TENSOR REMARK 3 T11: 0.1953 T22: 0.3400 REMARK 3 T33: 0.1218 T12: -0.1652 REMARK 3 T13: 0.0845 T23: -0.0871 REMARK 3 L TENSOR REMARK 3 L11: 2.2000 L22: 4.7235 REMARK 3 L33: 3.2032 L12: 0.5794 REMARK 3 L13: 0.3386 L23: 2.1739 REMARK 3 S TENSOR REMARK 3 S11: 0.2384 S12: -0.3893 S13: -0.0029 REMARK 3 S21: 0.3417 S22: -0.1461 S23: 0.2095 REMARK 3 S31: 0.2521 S32: -0.0002 S33: -0.0924 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : M 1 M 114 REMARK 3 ORIGIN FOR THE GROUP (A): -58.2196-102.0827 12.4423 REMARK 3 T TENSOR REMARK 3 T11: 0.0264 T22: 0.0262 REMARK 3 T33: 0.0629 T12: -0.0247 REMARK 3 T13: -0.0112 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 1.6055 L22: 2.8467 REMARK 3 L33: 1.1860 L12: 1.2438 REMARK 3 L13: -0.1009 L23: 0.1447 REMARK 3 S TENSOR REMARK 3 S11: 0.0669 S12: -0.0353 S13: -0.0464 REMARK 3 S21: 0.0909 S22: -0.1013 S23: -0.0632 REMARK 3 S31: 0.0434 S32: -0.0407 S33: 0.0344 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : M 115 M 216 REMARK 3 ORIGIN FOR THE GROUP (A): -91.6083-108.9396 23.8224 REMARK 3 T TENSOR REMARK 3 T11: 0.1261 T22: 0.2600 REMARK 3 T33: 0.2102 T12: -0.0505 REMARK 3 T13: 0.0456 T23: -0.1035 REMARK 3 L TENSOR REMARK 3 L11: 3.7870 L22: 1.8832 REMARK 3 L33: 3.7459 L12: -0.4435 REMARK 3 L13: -1.7810 L23: 1.4489 REMARK 3 S TENSOR REMARK 3 S11: 0.1570 S12: -0.2418 S13: 0.3560 REMARK 3 S21: 0.0779 S22: -0.2148 S23: 0.2941 REMARK 3 S31: -0.2693 S32: -0.5325 S33: 0.0577 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 1 X 117 REMARK 3 ORIGIN FOR THE GROUP (A): -49.9801 -36.0059 31.9711 REMARK 3 T TENSOR REMARK 3 T11: 0.2446 T22: 0.1123 REMARK 3 T33: 0.0624 T12: 0.1240 REMARK 3 T13: -0.0098 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.8801 L22: 4.2548 REMARK 3 L33: 2.0160 L12: -0.8478 REMARK 3 L13: 0.4052 L23: -0.1631 REMARK 3 S TENSOR REMARK 3 S11: -0.2755 S12: -0.1749 S13: 0.0675 REMARK 3 S21: 0.5680 S22: 0.2222 S23: -0.0959 REMARK 3 S31: -0.2840 S32: 0.0620 S33: 0.0533 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 118 X 218 REMARK 3 ORIGIN FOR THE GROUP (A): -55.2098 -1.7181 37.9479 REMARK 3 T TENSOR REMARK 3 T11: 0.5488 T22: 0.2510 REMARK 3 T33: 0.2153 T12: 0.0677 REMARK 3 T13: -0.0894 T23: -0.0581 REMARK 3 L TENSOR REMARK 3 L11: 3.6014 L22: 4.4994 REMARK 3 L33: 2.5821 L12: -2.3550 REMARK 3 L13: 2.1519 L23: -1.9338 REMARK 3 S TENSOR REMARK 3 S11: -0.1918 S12: -0.4457 S13: 0.2069 REMARK 3 S21: 0.9296 S22: 0.3172 S23: -0.0145 REMARK 3 S31: -0.0789 S32: -0.2333 S33: -0.1253 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Y 1 Y 114 REMARK 3 ORIGIN FOR THE GROUP (A): -59.4608 -28.6313 12.6266 REMARK 3 T TENSOR REMARK 3 T11: 0.0514 T22: 0.0312 REMARK 3 T33: 0.0767 T12: 0.0371 REMARK 3 T13: -0.0030 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.6191 L22: 3.1695 REMARK 3 L33: 1.1026 L12: -1.1180 REMARK 3 L13: -0.0236 L23: -0.0142 REMARK 3 S TENSOR REMARK 3 S11: -0.0828 S12: -0.0541 S13: -0.0298 REMARK 3 S21: 0.1436 S22: 0.0740 S23: 0.1462 REMARK 3 S31: -0.0616 S32: -0.0312 S33: 0.0088 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Y 115 Y 216 REMARK 3 ORIGIN FOR THE GROUP (A): -48.5934 3.6497 23.8001 REMARK 3 T TENSOR REMARK 3 T11: 0.2592 T22: 0.1572 REMARK 3 T33: 0.2972 T12: 0.0161 REMARK 3 T13: -0.1509 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 2.6757 L22: 3.5027 REMARK 3 L33: 3.6068 L12: 1.0679 REMARK 3 L13: 1.8137 L23: 1.0542 REMARK 3 S TENSOR REMARK 3 S11: -0.0867 S12: -0.0816 S13: 0.2162 REMARK 3 S21: 0.4645 S22: 0.0760 S23: -0.5358 REMARK 3 S31: -0.2332 S32: 0.4601 S33: 0.0107 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6W9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247853. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 233196 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 92.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.82100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 1I9R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG MME 2000, 0.1 M TRIMETHYLAMINE REMARK 280 N-OXIDE, 0.1 M TRIS-HCL PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 113.33850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 113.33850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 65.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, H, L, K, M, X, Y, D, REMARK 350 AND CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 560 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 116 REMARK 465 ASP A 117 REMARK 465 GLN A 118 REMARK 465 THR A 134 REMARK 465 GLU A 182 REMARK 465 ALA A 183 REMARK 465 SER A 184 REMARK 465 SER A 185 REMARK 465 GLN A 186 REMARK 465 GLY B 116 REMARK 465 ASP B 117 REMARK 465 GLN B 118 REMARK 465 THR B 134 REMARK 465 GLU B 182 REMARK 465 ALA B 183 REMARK 465 SER B 184 REMARK 465 SER B 185 REMARK 465 GLN B 186 REMARK 465 GLY C 116 REMARK 465 ASP C 117 REMARK 465 GLN C 118 REMARK 465 GLU C 182 REMARK 465 ALA C 183 REMARK 465 SER C 184 REMARK 465 SER C 185 REMARK 465 SER H 132 REMARK 465 SER H 133 REMARK 465 LYS H 134 REMARK 465 SER H 135 REMARK 465 THR H 136 REMARK 465 SER H 137 REMARK 465 LYS H 219 REMARK 465 SER H 220 REMARK 465 CYS H 221 REMARK 465 ASP H 222 REMARK 465 LYS H 223 REMARK 465 THR H 224 REMARK 465 HIS H 225 REMARK 465 THR H 226 REMARK 465 GLY L 216 REMARK 465 GLU L 217 REMARK 465 CYS L 218 REMARK 465 SER K 132 REMARK 465 SER K 133 REMARK 465 LYS K 134 REMARK 465 SER K 135 REMARK 465 THR K 136 REMARK 465 SER K 137 REMARK 465 SER K 220 REMARK 465 CYS K 221 REMARK 465 ASP K 222 REMARK 465 LYS K 223 REMARK 465 THR K 224 REMARK 465 HIS K 225 REMARK 465 THR K 226 REMARK 465 GLU M 217 REMARK 465 CYS M 218 REMARK 465 GLN X 43 REMARK 465 SER X 132 REMARK 465 SER X 133 REMARK 465 LYS X 134 REMARK 465 SER X 135 REMARK 465 THR X 136 REMARK 465 SER X 137 REMARK 465 LYS X 219 REMARK 465 SER X 220 REMARK 465 CYS X 221 REMARK 465 ASP X 222 REMARK 465 LYS X 223 REMARK 465 THR X 224 REMARK 465 HIS X 225 REMARK 465 THR X 226 REMARK 465 GLU Y 217 REMARK 465 CYS Y 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 159 CE NZ REMARK 470 ARG A 181 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 216 CE NZ REMARK 470 ILE A 223 CD1 REMARK 470 LYS B 133 CG CD CE NZ REMARK 470 LYS B 159 CE NZ REMARK 470 LYS C 159 CE NZ REMARK 470 ARG C 181 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 216 CD CE NZ REMARK 470 GLN H 1 CG CD OE1 NE2 REMARK 470 LYS H 13 CG CD CE NZ REMARK 470 LYS H 23 NZ REMARK 470 LYS H 65 CE NZ REMARK 470 ARG H 87 CZ NH1 NH2 REMARK 470 LYS H 122 CE NZ REMARK 470 ASP H 149 O REMARK 470 ILE H 200 CD1 REMARK 470 LYS H 206 CD CE NZ REMARK 470 LYS H 211 CG CD CE NZ REMARK 470 LYS H 215 CG CD CE NZ REMARK 470 GLU H 217 CB CG CD OE1 OE2 REMARK 470 ARG L 18 CZ NH1 NH2 REMARK 470 LYS L 49 NZ REMARK 470 GLU L 127 CD OE1 OE2 REMARK 470 LYS L 149 CE NZ REMARK 470 LYS L 153 CE NZ REMARK 470 ASN L 156 CG OD1 ND2 REMARK 470 LEU L 158 CG CD1 CD2 REMARK 470 LYS L 173 CD CE NZ REMARK 470 LYS L 192 CG CD CE NZ REMARK 470 GLN K 1 CD OE1 NE2 REMARK 470 LYS K 65 CE NZ REMARK 470 LYS K 206 NZ REMARK 470 LYS K 211 CE NZ REMARK 470 LYS K 215 CE NZ REMARK 470 LYS K 219 CG CD CE NZ REMARK 470 LYS M 130 CG CD CE NZ REMARK 470 LEU M 158 CG CD1 CD2 REMARK 470 LYS M 173 CD CE NZ REMARK 470 SER M 186 CB REMARK 470 LYS M 187 CD CE NZ REMARK 470 LYS M 192 CE NZ REMARK 470 LYS M 194 NZ REMARK 470 LYS M 211 CE NZ REMARK 470 GLN X 1 CB CG CD OE1 NE2 REMARK 470 LYS X 23 CD CE NZ REMARK 470 LYS X 65 CD CE NZ REMARK 470 ALA X 163 CB REMARK 470 THR X 196 CB OG1 CG2 REMARK 470 LYS X 211 CD CE NZ REMARK 470 LYS X 215 CG CD CE NZ REMARK 470 LYS Y 130 CE NZ REMARK 470 LEU Y 158 CG CD1 CD2 REMARK 470 LYS Y 173 CD CE NZ REMARK 470 LYS Y 187 CD CE NZ REMARK 470 ASP Y 189 CG OD1 OD2 REMARK 470 LYS Y 192 CG CD CE NZ REMARK 470 LYS Y 194 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 240 O5 NAG D 1 1.94 REMARK 500 ND2 ASN C 240 O5 NAG F 1 2.01 REMARK 500 ND2 ASN B 240 O5 NAG E 1 2.01 REMARK 500 OD1 ASN A 210 NE2 GLN A 221 2.18 REMARK 500 OD1 ASP M 1 O HOH M 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 243 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG L 28 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG L 146 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG Y 112 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG Y 112 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 148 89.45 -156.23 REMARK 500 ASN A 150 -176.49 -170.49 REMARK 500 THR C 135 141.40 -174.51 REMARK 500 MET C 148 96.35 -160.37 REMARK 500 ASN H 103 -90.84 -119.78 REMARK 500 ASP H 149 60.57 63.03 REMARK 500 SER L 31 -149.39 -130.69 REMARK 500 ALA L 55 -41.51 71.51 REMARK 500 ALA L 88 178.81 178.93 REMARK 500 LYS L 194 -65.57 -107.45 REMARK 500 PRO K 41 35.79 -57.90 REMARK 500 GLN K 43 -145.86 151.28 REMARK 500 ASN K 103 -90.43 -119.65 REMARK 500 ASP K 149 61.62 68.05 REMARK 500 SER K 192 -8.90 -58.92 REMARK 500 SER M 31 -149.99 -130.88 REMARK 500 ALA M 55 -40.30 75.42 REMARK 500 ALA M 88 174.46 178.25 REMARK 500 LYS M 194 -63.54 -101.42 REMARK 500 ASN X 103 -86.71 -119.73 REMARK 500 SER X 161 52.44 35.26 REMARK 500 SER Y 31 -146.97 -128.15 REMARK 500 ALA Y 55 -41.62 75.84 REMARK 500 LYS Y 194 -63.47 -103.28 REMARK 500 ARG Y 215 108.00 -53.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY K 44 LEU K 45 -144.44 REMARK 500 DV7 M 98 PRO M 99 -40.78 REMARK 500 SER M 160 GLY M 161 -34.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ETE A 311 REMARK 610 ETE M 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1I9R RELATED DB: PDB REMARK 900 RELATED ID: 6BJZ RELATED DB: PDB REMARK 900 RELATED ID: 6W4W RELATED DB: PDB REMARK 900 RELATED ID: 6W5A RELATED DB: PDB DBREF 6W9G A 116 261 UNP P29965 CD40L_HUMAN 116 261 DBREF 6W9G B 116 261 UNP P29965 CD40L_HUMAN 116 261 DBREF 6W9G C 116 261 UNP P29965 CD40L_HUMAN 116 261 DBREF 6W9G H 1 226 PDB 6W9G 6W9G 1 226 DBREF 6W9G L 1 218 PDB 6W9G 6W9G 1 218 DBREF 6W9G K 1 226 PDB 6W9G 6W9G 1 226 DBREF 6W9G M 1 218 PDB 6W9G 6W9G 1 218 DBREF 6W9G X 1 226 PDB 6W9G 6W9G 1 226 DBREF 6W9G Y 1 218 PDB 6W9G 6W9G 1 218 SEQRES 1 A 146 GLY ASP GLN ASN PRO GLN ILE ALA ALA HIS VAL ILE SER SEQRES 2 A 146 GLU ALA SER SER LYS THR THR SER VAL LEU GLN TRP ALA SEQRES 3 A 146 GLU LYS GLY TYR TYR THR MET SER ASN ASN LEU VAL THR SEQRES 4 A 146 LEU GLU ASN GLY LYS GLN LEU THR VAL LYS ARG GLN GLY SEQRES 5 A 146 LEU TYR TYR ILE TYR ALA GLN VAL THR PHE CYS SER ASN SEQRES 6 A 146 ARG GLU ALA SER SER GLN ALA PRO PHE ILE ALA SER LEU SEQRES 7 A 146 CYS LEU LYS SER PRO GLY ARG PHE GLU ARG ILE LEU LEU SEQRES 8 A 146 ARG ALA ALA ASN THR HIS SER SER ALA LYS PRO CYS GLY SEQRES 9 A 146 GLN GLN SER ILE HIS LEU GLY GLY VAL PHE GLU LEU GLN SEQRES 10 A 146 PRO GLY ALA SER VAL PHE VAL ASN VAL THR ASP PRO SER SEQRES 11 A 146 GLN VAL SER HIS GLY THR GLY PHE THR SER PHE GLY LEU SEQRES 12 A 146 LEU LYS LEU SEQRES 1 B 146 GLY ASP GLN ASN PRO GLN ILE ALA ALA HIS VAL ILE SER SEQRES 2 B 146 GLU ALA SER SER LYS THR THR SER VAL LEU GLN TRP ALA SEQRES 3 B 146 GLU LYS GLY TYR TYR THR MET SER ASN ASN LEU VAL THR SEQRES 4 B 146 LEU GLU ASN GLY LYS GLN LEU THR VAL LYS ARG GLN GLY SEQRES 5 B 146 LEU TYR TYR ILE TYR ALA GLN VAL THR PHE CYS SER ASN SEQRES 6 B 146 ARG GLU ALA SER SER GLN ALA PRO PHE ILE ALA SER LEU SEQRES 7 B 146 CYS LEU LYS SER PRO GLY ARG PHE GLU ARG ILE LEU LEU SEQRES 8 B 146 ARG ALA ALA ASN THR HIS SER SER ALA LYS PRO CYS GLY SEQRES 9 B 146 GLN GLN SER ILE HIS LEU GLY GLY VAL PHE GLU LEU GLN SEQRES 10 B 146 PRO GLY ALA SER VAL PHE VAL ASN VAL THR ASP PRO SER SEQRES 11 B 146 GLN VAL SER HIS GLY THR GLY PHE THR SER PHE GLY LEU SEQRES 12 B 146 LEU LYS LEU SEQRES 1 C 146 GLY ASP GLN ASN PRO GLN ILE ALA ALA HIS VAL ILE SER SEQRES 2 C 146 GLU ALA SER SER LYS THR THR SER VAL LEU GLN TRP ALA SEQRES 3 C 146 GLU LYS GLY TYR TYR THR MET SER ASN ASN LEU VAL THR SEQRES 4 C 146 LEU GLU ASN GLY LYS GLN LEU THR VAL LYS ARG GLN GLY SEQRES 5 C 146 LEU TYR TYR ILE TYR ALA GLN VAL THR PHE CYS SER ASN SEQRES 6 C 146 ARG GLU ALA SER SER GLN ALA PRO PHE ILE ALA SER LEU SEQRES 7 C 146 CYS LEU LYS SER PRO GLY ARG PHE GLU ARG ILE LEU LEU SEQRES 8 C 146 ARG ALA ALA ASN THR HIS SER SER ALA LYS PRO CYS GLY SEQRES 9 C 146 GLN GLN SER ILE HIS LEU GLY GLY VAL PHE GLU LEU GLN SEQRES 10 C 146 PRO GLY ALA SER VAL PHE VAL ASN VAL THR ASP PRO SER SEQRES 11 C 146 GLN VAL SER HIS GLY THR GLY PHE THR SER PHE GLY LEU SEQRES 12 C 146 LEU LYS LEU SEQRES 1 H 226 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL VAL LYS SEQRES 2 H 226 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 H 226 TYR ILE PHE THR SER TYR TYR MET TYR TRP VAL LYS GLN SEQRES 4 H 226 ALA PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASN SEQRES 5 H 226 PRO SER ASN GLY ASP THR ASN PHE ASN GLU LYS PHE LYS SEQRES 6 H 226 SER LYS ALA THR LEU THR VAL ASP LYS SER ALA SER THR SEQRES 7 H 226 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 226 ALA VAL TYR TYR CYS THR ARG SER ASP GLY ARG ASN ASP SEQRES 9 H 226 MET ASP SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 H 226 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 H 226 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 H 226 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 226 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 226 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 226 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 226 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 226 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 18 H 226 ASP LYS THR HIS THR SEQRES 1 L 218 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 218 SER PRO GLY GLU ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 L 218 GLN ARG VAL SER SER SER THR TYR SER TYR MET HIS TRP SEQRES 4 L 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 L 218 LYS TYR ALA SER ASN LEU GLU SER GLY VAL PRO ALA ARG SEQRES 6 L 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 L 218 ILE SER SER VAL GLU PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 L 218 CYS GLN HIS SER TRP GLU DV7 PRO PRO THR PHE GLY GLY SEQRES 9 L 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 L 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 L 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 L 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 L 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 L 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 L 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 L 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 L 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 K 226 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL VAL LYS SEQRES 2 K 226 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 K 226 TYR ILE PHE THR SER TYR TYR MET TYR TRP VAL LYS GLN SEQRES 4 K 226 ALA PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASN SEQRES 5 K 226 PRO SER ASN GLY ASP THR ASN PHE ASN GLU LYS PHE LYS SEQRES 6 K 226 SER LYS ALA THR LEU THR VAL ASP LYS SER ALA SER THR SEQRES 7 K 226 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 K 226 ALA VAL TYR TYR CYS THR ARG SER ASP GLY ARG ASN ASP SEQRES 9 K 226 MET ASP SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 K 226 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 K 226 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 K 226 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 K 226 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 K 226 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 K 226 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 K 226 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 K 226 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 18 K 226 ASP LYS THR HIS THR SEQRES 1 M 218 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 M 218 SER PRO GLY GLU ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 M 218 GLN ARG VAL SER SER SER THR TYR SER TYR MET HIS TRP SEQRES 4 M 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 M 218 LYS TYR ALA SER ASN LEU GLU SER GLY VAL PRO ALA ARG SEQRES 6 M 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 M 218 ILE SER SER VAL GLU PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 M 218 CYS GLN HIS SER TRP GLU DV7 PRO PRO THR PHE GLY GLY SEQRES 9 M 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 M 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 M 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 M 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 M 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 M 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 M 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 M 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 M 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 X 226 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL VAL LYS SEQRES 2 X 226 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 X 226 TYR ILE PHE THR SER TYR TYR MET TYR TRP VAL LYS GLN SEQRES 4 X 226 ALA PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASN SEQRES 5 X 226 PRO SER ASN GLY ASP THR ASN PHE ASN GLU LYS PHE LYS SEQRES 6 X 226 SER LYS ALA THR LEU THR VAL ASP LYS SER ALA SER THR SEQRES 7 X 226 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 X 226 ALA VAL TYR TYR CYS THR ARG SER ASP GLY ARG ASN ASP SEQRES 9 X 226 MET ASP SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 X 226 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 X 226 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 X 226 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 X 226 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 X 226 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 X 226 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 X 226 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 X 226 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 18 X 226 ASP LYS THR HIS THR SEQRES 1 Y 218 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 Y 218 SER PRO GLY GLU ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 Y 218 GLN ARG VAL SER SER SER THR TYR SER TYR MET HIS TRP SEQRES 4 Y 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 Y 218 LYS TYR ALA SER ASN LEU GLU SER GLY VAL PRO ALA ARG SEQRES 6 Y 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 Y 218 ILE SER SER VAL GLU PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 Y 218 CYS GLN HIS SER TRP GLU DV7 PRO PRO THR PHE GLY GLY SEQRES 9 Y 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 Y 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 Y 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 Y 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 Y 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 Y 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 Y 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 Y 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 Y 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS HET DV7 L 98 18 HET DV7 M 98 18 HET DV7 Y 98 33 HET NAG D 1 28 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET MAN D 5 11 HET MAN D 6 11 HET NAG E 1 28 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET MAN E 6 11 HET NAG F 1 28 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET MAN F 6 11 HET PEG A 307 7 HET TRS A 308 8 HET TRS A 309 8 HET TMO A 310 5 HET ETE A 311 13 HET PEG B 307 7 HET TMO B 308 5 HET ETE B 309 14 HET PEG C 307 7 HET PEG C 308 7 HET TMO C 309 5 HET 1PE C 310 16 HET TMO H 301 5 HET TMO H 302 5 HET PEG L 301 7 HET TMO L 302 5 HET TMO L 303 5 HET TMO L 304 5 HET TMO L 305 5 HET TMO K 301 5 HET TMO K 302 5 HET TMO K 303 5 HET TMO K 304 5 HET TMO M 301 5 HET TMO M 302 5 HET TMO M 303 5 HET TMO M 304 5 HET ETE M 305 10 HET TMO X 301 5 HET TMO X 302 5 HET PEG Y 301 7 HET PEG Y 302 7 HET PEG Y 303 7 HET TMO Y 304 5 HET TMO Y 305 5 HETNAM DV7 L-(7-HYDROXYCOUMARIN-4-YL)ETHYLGLYCINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM TMO TRIMETHYLAMINE OXIDE HETNAM ETE 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN DV7 (2S)-2-AMINO-4-(7-HYDROXY-2-OXO-2H-1-BENZOPYRAN-4-YL) HETSYN 2 DV7 BUTANOIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN TRS TRIS BUFFER HETSYN 1PE PEG400 FORMUL 5 DV7 3(C13 H13 N O5) FORMUL 10 NAG 6(C8 H15 N O6) FORMUL 10 BMA 3(C6 H12 O6) FORMUL 10 MAN 9(C6 H12 O6) FORMUL 13 PEG 8(C4 H10 O3) FORMUL 14 TRS 2(C4 H12 N O3 1+) FORMUL 16 TMO 21(C3 H9 N O) FORMUL 17 ETE 3(C9 H20 O5) FORMUL 24 1PE C10 H22 O6 FORMUL 48 HOH *1238(H2 O) HELIX 1 AA1 ASP A 243 VAL A 247 5 5 HELIX 2 AA2 ASP B 243 VAL B 247 5 5 HELIX 3 AA3 ASP C 243 VAL C 247 5 5 HELIX 4 AA4 ILE H 28 TYR H 32 5 5 HELIX 5 AA5 GLU H 62 LYS H 65 5 4 HELIX 6 AA6 ARG H 87 THR H 91 5 5 HELIX 7 AA7 SER H 161 ALA H 163 5 3 HELIX 8 AA8 SER H 192 LEU H 194 5 3 HELIX 9 AA9 LYS H 206 ASN H 209 5 4 HELIX 10 AB1 GLU L 83 PHE L 87 5 5 HELIX 11 AB2 SER L 125 LYS L 130 1 6 HELIX 12 AB3 LYS L 187 LYS L 192 1 6 HELIX 13 AB4 ILE K 28 TYR K 32 5 5 HELIX 14 AB5 GLU K 62 LYS K 65 5 4 HELIX 15 AB6 ARG K 87 THR K 91 5 5 HELIX 16 AB7 SER K 161 ALA K 163 5 3 HELIX 17 AB8 SER K 192 LEU K 194 5 3 HELIX 18 AB9 LYS K 206 ASN K 209 5 4 HELIX 19 AC1 GLU M 83 PHE M 87 5 5 HELIX 20 AC2 SER M 125 SER M 131 1 7 HELIX 21 AC3 LYS M 187 LYS M 192 1 6 HELIX 22 AC4 ILE X 28 TYR X 32 5 5 HELIX 23 AC5 GLU X 62 LYS X 65 5 4 HELIX 24 AC6 LYS X 74 ALA X 76 5 3 HELIX 25 AC7 ARG X 87 THR X 91 5 5 HELIX 26 AC8 SER X 192 GLN X 197 1 6 HELIX 27 AC9 LYS X 206 ASN X 209 5 4 HELIX 28 AD1 GLU Y 83 PHE Y 87 5 5 HELIX 29 AD2 SER Y 125 SER Y 131 1 7 HELIX 30 AD3 LYS Y 187 LYS Y 192 1 6 SHEET 1 AA1 3 GLN A 139 ALA A 141 0 SHEET 2 AA1 3 ALA A 123 GLU A 129 -1 N ILE A 127 O ALA A 141 SHEET 3 AA1 3 THR A 147 MET A 148 -1 O THR A 147 N HIS A 125 SHEET 1 AA2 5 GLN A 139 ALA A 141 0 SHEET 2 AA2 5 ALA A 123 GLU A 129 -1 N ILE A 127 O ALA A 141 SHEET 3 AA2 5 SER A 255 LYS A 260 -1 O PHE A 256 N VAL A 126 SHEET 4 AA2 5 GLY A 167 SER A 179 -1 N TYR A 172 O GLY A 257 SHEET 5 AA2 5 GLY A 219 LEU A 231 -1 O LEU A 225 N ALA A 173 SHEET 1 AA3 5 VAL A 153 GLU A 156 0 SHEET 2 AA3 5 GLN A 160 VAL A 163 -1 O GLN A 160 N GLU A 156 SHEET 3 AA3 5 SER A 236 VAL A 241 -1 O VAL A 237 N LEU A 161 SHEET 4 AA3 5 PHE A 189 LYS A 196 -1 N CYS A 194 O PHE A 238 SHEET 5 AA3 5 ARG A 203 ASN A 210 -1 O LEU A 205 N LEU A 193 SHEET 1 AA4 3 GLN B 139 ALA B 141 0 SHEET 2 AA4 3 ALA B 123 GLU B 129 -1 N ILE B 127 O ALA B 141 SHEET 3 AA4 3 THR B 147 MET B 148 -1 O THR B 147 N HIS B 125 SHEET 1 AA5 5 GLN B 139 ALA B 141 0 SHEET 2 AA5 5 ALA B 123 GLU B 129 -1 N ILE B 127 O ALA B 141 SHEET 3 AA5 5 SER B 255 LYS B 260 -1 O PHE B 256 N VAL B 126 SHEET 4 AA5 5 GLY B 167 SER B 179 -1 N GLN B 174 O SER B 255 SHEET 5 AA5 5 GLY B 219 LEU B 231 -1 O LEU B 231 N GLY B 167 SHEET 1 AA6 5 VAL B 153 GLU B 156 0 SHEET 2 AA6 5 GLN B 160 VAL B 163 -1 O GLN B 160 N GLU B 156 SHEET 3 AA6 5 SER B 236 VAL B 241 -1 O VAL B 237 N LEU B 161 SHEET 4 AA6 5 PHE B 189 LYS B 196 -1 N CYS B 194 O PHE B 238 SHEET 5 AA6 5 ARG B 203 ASN B 210 -1 O LEU B 205 N LEU B 193 SHEET 1 AA7 3 GLN C 139 ALA C 141 0 SHEET 2 AA7 3 ALA C 123 GLU C 129 -1 N GLU C 129 O GLN C 139 SHEET 3 AA7 3 THR C 147 MET C 148 -1 O THR C 147 N HIS C 125 SHEET 1 AA8 5 GLN C 139 ALA C 141 0 SHEET 2 AA8 5 ALA C 123 GLU C 129 -1 N GLU C 129 O GLN C 139 SHEET 3 AA8 5 SER C 255 LYS C 260 -1 O PHE C 256 N VAL C 126 SHEET 4 AA8 5 GLY C 167 SER C 179 -1 N TYR C 172 O GLY C 257 SHEET 5 AA8 5 GLY C 219 LEU C 231 -1 O LEU C 231 N GLY C 167 SHEET 1 AA9 5 VAL C 153 GLU C 156 0 SHEET 2 AA9 5 GLN C 160 VAL C 163 -1 O THR C 162 N THR C 154 SHEET 3 AA9 5 SER C 236 VAL C 241 -1 O VAL C 237 N LEU C 161 SHEET 4 AA9 5 PHE C 189 LYS C 196 -1 N CYS C 194 O PHE C 238 SHEET 5 AA9 5 ARG C 203 ASN C 210 -1 O LEU C 205 N LEU C 193 SHEET 1 AB1 4 GLN H 3 GLN H 6 0 SHEET 2 AB1 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AB1 4 THR H 78 LEU H 83 -1 O MET H 81 N LEU H 20 SHEET 4 AB1 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AB2 6 GLU H 10 VAL H 12 0 SHEET 2 AB2 6 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AB2 6 ALA H 92 ASP H 100 -1 N ALA H 92 O VAL H 114 SHEET 4 AB2 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AB2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 AB2 6 THR H 58 PHE H 60 -1 O ASN H 59 N GLU H 50 SHEET 1 AB3 4 GLU H 10 VAL H 12 0 SHEET 2 AB3 4 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AB3 4 ALA H 92 ASP H 100 -1 N ALA H 92 O VAL H 114 SHEET 4 AB3 4 ASP H 104 TRP H 108 -1 O SER H 107 N ARG H 98 SHEET 1 AB4 4 SER H 125 LEU H 129 0 SHEET 2 AB4 4 THR H 140 LYS H 148 -1 O LEU H 146 N PHE H 127 SHEET 3 AB4 4 TYR H 181 PRO H 190 -1 O LEU H 183 N VAL H 147 SHEET 4 AB4 4 VAL H 168 THR H 170 -1 N HIS H 169 O VAL H 186 SHEET 1 AB5 4 SER H 125 LEU H 129 0 SHEET 2 AB5 4 THR H 140 LYS H 148 -1 O LEU H 146 N PHE H 127 SHEET 3 AB5 4 TYR H 181 PRO H 190 -1 O LEU H 183 N VAL H 147 SHEET 4 AB5 4 VAL H 174 LEU H 175 -1 N VAL H 174 O SER H 182 SHEET 1 AB6 3 THR H 156 TRP H 159 0 SHEET 2 AB6 3 TYR H 199 HIS H 205 -1 O ASN H 204 N THR H 156 SHEET 3 AB6 3 THR H 210 VAL H 216 -1 O THR H 210 N HIS H 205 SHEET 1 AB7 4 LEU L 4 SER L 7 0 SHEET 2 AB7 4 ALA L 19 ALA L 25 -1 O SER L 22 N SER L 7 SHEET 3 AB7 4 ASP L 74 ILE L 79 -1 O ILE L 79 N ALA L 19 SHEET 4 AB7 4 PHE L 66 SER L 71 -1 N SER L 67 O THR L 78 SHEET 1 AB8 6 THR L 10 VAL L 13 0 SHEET 2 AB8 6 THR L 106 ILE L 110 1 O GLU L 109 N LEU L 11 SHEET 3 AB8 6 ALA L 88 HIS L 94 -1 N ALA L 88 O LEU L 108 SHEET 4 AB8 6 MET L 37 GLN L 42 -1 N GLN L 42 O THR L 89 SHEET 5 AB8 6 LYS L 49 LYS L 53 -1 O LEU L 51 N TRP L 39 SHEET 6 AB8 6 ASN L 57 LEU L 58 -1 O ASN L 57 N LYS L 53 SHEET 1 AB9 4 SER L 118 PHE L 122 0 SHEET 2 AB9 4 THR L 133 PHE L 143 -1 O VAL L 137 N PHE L 122 SHEET 3 AB9 4 TYR L 177 SER L 186 -1 O TYR L 177 N PHE L 143 SHEET 4 AB9 4 SER L 163 VAL L 167 -1 N GLN L 164 O THR L 182 SHEET 1 AC1 4 ALA L 157 LEU L 158 0 SHEET 2 AC1 4 LYS L 149 VAL L 154 -1 N VAL L 154 O ALA L 157 SHEET 3 AC1 4 VAL L 195 THR L 201 -1 O GLU L 199 N GLN L 151 SHEET 4 AC1 4 VAL L 209 ASN L 214 -1 O VAL L 209 N VAL L 200 SHEET 1 AC2 4 GLN K 3 GLN K 6 0 SHEET 2 AC2 4 VAL K 18 SER K 25 -1 O LYS K 23 N VAL K 5 SHEET 3 AC2 4 THR K 78 LEU K 83 -1 O MET K 81 N LEU K 20 SHEET 4 AC2 4 ALA K 68 ASP K 73 -1 N THR K 71 O TYR K 80 SHEET 1 AC3 6 GLU K 10 VAL K 12 0 SHEET 2 AC3 6 THR K 112 VAL K 116 1 O THR K 115 N VAL K 12 SHEET 3 AC3 6 ALA K 92 ASP K 100 -1 N ALA K 92 O VAL K 114 SHEET 4 AC3 6 TYR K 33 GLN K 39 -1 N VAL K 37 O TYR K 95 SHEET 5 AC3 6 LEU K 45 ILE K 51 -1 O ILE K 48 N TRP K 36 SHEET 6 AC3 6 THR K 58 PHE K 60 -1 O ASN K 59 N GLU K 50 SHEET 1 AC4 4 GLU K 10 VAL K 12 0 SHEET 2 AC4 4 THR K 112 VAL K 116 1 O THR K 115 N VAL K 12 SHEET 3 AC4 4 ALA K 92 ASP K 100 -1 N ALA K 92 O VAL K 114 SHEET 4 AC4 4 ASP K 104 TRP K 108 -1 O SER K 107 N ARG K 98 SHEET 1 AC5 4 SER K 125 LEU K 129 0 SHEET 2 AC5 4 THR K 140 TYR K 150 -1 O LEU K 146 N PHE K 127 SHEET 3 AC5 4 TYR K 181 PRO K 190 -1 O LEU K 183 N VAL K 147 SHEET 4 AC5 4 VAL K 168 THR K 170 -1 N HIS K 169 O VAL K 186 SHEET 1 AC6 4 SER K 125 LEU K 129 0 SHEET 2 AC6 4 THR K 140 TYR K 150 -1 O LEU K 146 N PHE K 127 SHEET 3 AC6 4 TYR K 181 PRO K 190 -1 O LEU K 183 N VAL K 147 SHEET 4 AC6 4 VAL K 174 LEU K 175 -1 N VAL K 174 O SER K 182 SHEET 1 AC7 3 THR K 156 TRP K 159 0 SHEET 2 AC7 3 ILE K 200 HIS K 205 -1 O ASN K 202 N SER K 158 SHEET 3 AC7 3 THR K 210 LYS K 215 -1 O VAL K 212 N VAL K 203 SHEET 1 AC8 4 LEU M 4 SER M 7 0 SHEET 2 AC8 4 ALA M 19 ALA M 25 -1 O ARG M 24 N THR M 5 SHEET 3 AC8 4 ASP M 74 ILE M 79 -1 O ILE M 79 N ALA M 19 SHEET 4 AC8 4 PHE M 66 SER M 71 -1 N SER M 69 O THR M 76 SHEET 1 AC9 6 THR M 10 VAL M 13 0 SHEET 2 AC9 6 THR M 106 ILE M 110 1 O LYS M 107 N LEU M 11 SHEET 3 AC9 6 ALA M 88 HIS M 94 -1 N ALA M 88 O LEU M 108 SHEET 4 AC9 6 MET M 37 GLN M 42 -1 N GLN M 42 O THR M 89 SHEET 5 AC9 6 LYS M 49 LYS M 53 -1 O LEU M 51 N TRP M 39 SHEET 6 AC9 6 ASN M 57 LEU M 58 -1 O ASN M 57 N LYS M 53 SHEET 1 AD1 4 SER M 118 PHE M 122 0 SHEET 2 AD1 4 THR M 133 PHE M 143 -1 O ASN M 141 N SER M 118 SHEET 3 AD1 4 TYR M 177 SER M 186 -1 O LEU M 183 N VAL M 136 SHEET 4 AD1 4 SER M 163 VAL M 167 -1 N SER M 166 O SER M 180 SHEET 1 AD2 4 ALA M 157 LEU M 158 0 SHEET 2 AD2 4 LYS M 149 VAL M 154 -1 N VAL M 154 O ALA M 157 SHEET 3 AD2 4 VAL M 195 THR M 201 -1 O GLU M 199 N GLN M 151 SHEET 4 AD2 4 VAL M 209 ASN M 214 -1 O VAL M 209 N VAL M 200 SHEET 1 AD3 4 GLN X 3 GLN X 6 0 SHEET 2 AD3 4 VAL X 18 SER X 25 -1 O LYS X 23 N VAL X 5 SHEET 3 AD3 4 THR X 78 LEU X 83 -1 O MET X 81 N LEU X 20 SHEET 4 AD3 4 ALA X 68 ASP X 73 -1 N THR X 71 O TYR X 80 SHEET 1 AD4 6 GLU X 10 VAL X 12 0 SHEET 2 AD4 6 THR X 112 VAL X 116 1 O LEU X 113 N GLU X 10 SHEET 3 AD4 6 ALA X 92 ASP X 100 -1 N ALA X 92 O VAL X 114 SHEET 4 AD4 6 TYR X 33 GLN X 39 -1 N VAL X 37 O TYR X 95 SHEET 5 AD4 6 LEU X 45 ILE X 51 -1 O ILE X 48 N TRP X 36 SHEET 6 AD4 6 THR X 58 PHE X 60 -1 O ASN X 59 N GLU X 50 SHEET 1 AD5 4 GLU X 10 VAL X 12 0 SHEET 2 AD5 4 THR X 112 VAL X 116 1 O LEU X 113 N GLU X 10 SHEET 3 AD5 4 ALA X 92 ASP X 100 -1 N ALA X 92 O VAL X 114 SHEET 4 AD5 4 ASP X 104 TRP X 108 -1 O SER X 107 N ARG X 98 SHEET 1 AD6 4 SER X 125 LEU X 129 0 SHEET 2 AD6 4 THR X 140 TYR X 150 -1 O GLY X 144 N LEU X 129 SHEET 3 AD6 4 TYR X 181 PRO X 190 -1 O LEU X 183 N VAL X 147 SHEET 4 AD6 4 VAL X 168 THR X 170 -1 N HIS X 169 O VAL X 186 SHEET 1 AD7 4 SER X 125 LEU X 129 0 SHEET 2 AD7 4 THR X 140 TYR X 150 -1 O GLY X 144 N LEU X 129 SHEET 3 AD7 4 TYR X 181 PRO X 190 -1 O LEU X 183 N VAL X 147 SHEET 4 AD7 4 VAL X 174 LEU X 175 -1 N VAL X 174 O SER X 182 SHEET 1 AD8 3 THR X 156 TRP X 159 0 SHEET 2 AD8 3 TYR X 199 HIS X 205 -1 O ASN X 202 N SER X 158 SHEET 3 AD8 3 THR X 210 VAL X 216 -1 O VAL X 216 N TYR X 199 SHEET 1 AD9 4 LEU Y 4 SER Y 7 0 SHEET 2 AD9 4 ALA Y 19 ALA Y 25 -1 O SER Y 22 N SER Y 7 SHEET 3 AD9 4 ASP Y 74 ILE Y 79 -1 O ILE Y 79 N ALA Y 19 SHEET 4 AD9 4 PHE Y 66 SER Y 71 -1 N SER Y 67 O THR Y 78 SHEET 1 AE1 6 THR Y 10 VAL Y 13 0 SHEET 2 AE1 6 THR Y 106 ILE Y 110 1 O LYS Y 107 N LEU Y 11 SHEET 3 AE1 6 ALA Y 88 HIS Y 94 -1 N ALA Y 88 O LEU Y 108 SHEET 4 AE1 6 MET Y 37 GLN Y 42 -1 N GLN Y 42 O THR Y 89 SHEET 5 AE1 6 LYS Y 49 LYS Y 53 -1 O LEU Y 51 N TRP Y 39 SHEET 6 AE1 6 ASN Y 57 LEU Y 58 -1 O ASN Y 57 N LYS Y 53 SHEET 1 AE2 4 SER Y 118 PHE Y 122 0 SHEET 2 AE2 4 THR Y 133 PHE Y 143 -1 O ASN Y 141 N SER Y 118 SHEET 3 AE2 4 TYR Y 177 SER Y 186 -1 O LEU Y 185 N ALA Y 134 SHEET 4 AE2 4 SER Y 163 VAL Y 167 -1 N GLN Y 164 O THR Y 182 SHEET 1 AE3 4 ALA Y 157 LEU Y 158 0 SHEET 2 AE3 4 LYS Y 149 VAL Y 154 -1 N VAL Y 154 O ALA Y 157 SHEET 3 AE3 4 VAL Y 195 THR Y 201 -1 O GLU Y 199 N GLN Y 151 SHEET 4 AE3 4 VAL Y 209 ASN Y 214 -1 O VAL Y 209 N VAL Y 200 SSBOND 1 CYS A 178 CYS A 218 1555 1555 2.03 SSBOND 2 CYS B 178 CYS B 218 1555 1555 1.99 SSBOND 3 CYS C 178 CYS C 218 1555 1555 2.03 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.08 SSBOND 5 CYS H 145 CYS H 201 1555 1555 2.05 SSBOND 6 CYS L 23 CYS L 92 1555 1555 2.10 SSBOND 7 CYS L 138 CYS L 198 1555 1555 2.03 SSBOND 8 CYS K 22 CYS K 96 1555 1555 2.07 SSBOND 9 CYS K 145 CYS K 201 1555 1555 2.07 SSBOND 10 CYS M 23 CYS M 92 1555 1555 2.12 SSBOND 11 CYS M 138 CYS M 198 1555 1555 2.02 SSBOND 12 CYS X 22 CYS X 96 1555 1555 2.06 SSBOND 13 CYS X 145 CYS X 201 1555 1555 2.05 SSBOND 14 CYS Y 23 CYS Y 92 1555 1555 2.08 SSBOND 15 CYS Y 138 CYS Y 198 1555 1555 2.02 LINK ND2 ASN A 240 C1 ANAG D 1 1555 1555 1.48 LINK ND2 ASN A 240 C1 BNAG D 1 1555 1555 1.44 LINK ND2 ASN B 240 C1 ANAG E 1 1555 1555 1.49 LINK ND2 ASN B 240 C1 BNAG E 1 1555 1555 1.44 LINK ND2 ASN C 240 C1 ANAG F 1 1555 1555 1.47 LINK ND2 ASN C 240 C1 BNAG F 1 1555 1555 1.44 LINK C GLU L 97 N DV7 L 98 1555 1555 1.33 LINK C DV7 L 98 N PRO L 99 1555 1555 1.33 LINK C GLU M 97 N ADV7 M 98 1555 1555 1.33 LINK C ADV7 M 98 N PRO M 99 1555 1555 1.33 LINK C GLU Y 97 N DV7 Y 98 1555 1555 1.33 LINK C DV7 Y 98 N PRO Y 99 1555 1555 1.33 LINK O4 BNAG D 1 C1 BNAG D 2 1555 1555 1.42 LINK O4 BNAG D 2 C1 BBMA D 3 1555 1555 1.44 LINK O6 BBMA D 3 C1 BMAN D 4 1555 1555 1.43 LINK O6 BMAN D 4 C1 BMAN D 5 1555 1555 1.43 LINK O2 BMAN D 5 C1 BMAN D 6 1555 1555 1.43 LINK O4 BNAG E 1 C1 BNAG E 2 1555 1555 1.43 LINK O4 BNAG E 2 C1 BBMA E 3 1555 1555 1.44 LINK O6 BBMA E 3 C1 BMAN E 4 1555 1555 1.43 LINK O6 BMAN E 4 C1 BMAN E 5 1555 1555 1.43 LINK O2 BMAN E 5 C1 BMAN E 6 1555 1555 1.42 LINK O4 BNAG F 1 C1 BNAG F 2 1555 1555 1.42 LINK O4 BNAG F 2 C1 BBMA F 3 1555 1555 1.43 LINK O6 BBMA F 3 C1 BMAN F 4 1555 1555 1.43 LINK O6 BMAN F 4 C1 BMAN F 5 1555 1555 1.44 LINK O2 BMAN F 5 C1 BMAN F 6 1555 1555 1.44 CISPEP 1 LYS A 216 PRO A 217 0 -0.88 CISPEP 2 LYS B 216 PRO B 217 0 -4.34 CISPEP 3 LYS C 216 PRO C 217 0 -4.89 CISPEP 4 PHE H 151 PRO H 152 0 -14.60 CISPEP 5 GLU H 153 PRO H 154 0 -3.58 CISPEP 6 SER L 7 PRO L 8 0 -15.97 CISPEP 7 DV7 L 98 PRO L 99 0 -11.71 CISPEP 8 TYR L 144 PRO L 145 0 6.33 CISPEP 9 PHE K 151 PRO K 152 0 -7.56 CISPEP 10 GLU K 153 PRO K 154 0 0.43 CISPEP 11 GLU K 153 PRO K 154 0 -0.68 CISPEP 12 SER M 7 PRO M 8 0 -12.13 CISPEP 13 TYR M 144 PRO M 145 0 2.67 CISPEP 14 PHE X 151 PRO X 152 0 -9.17 CISPEP 15 GLU X 153 PRO X 154 0 -0.63 CISPEP 16 GLU X 153 PRO X 154 0 0.26 CISPEP 17 SER Y 7 PRO Y 8 0 -11.36 CISPEP 18 DV7 Y 98 PRO Y 99 0 -4.22 CISPEP 19 DV7 Y 98 PRO Y 99 0 -4.69 CISPEP 20 TYR Y 144 PRO Y 145 0 5.74 CRYST1 226.677 131.200 97.560 90.00 108.82 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004412 0.000000 0.001504 0.00000 SCALE2 0.000000 0.007622 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010829 0.00000