HEADER VIRAL PROTEIN/IMMUNE SYSTEM 03-APR-20 6WF0 TITLE CRYSTAL STRUCTURE OF BROADLY NEUTRALIZING ANTIBODY 3I14 BOUND TO THE TITLE 2 INFLUENZA A H3 HEMAGGLUTININ COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMAGGLUTININ; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HEAVY CHAIN; COMPND 11 CHAIN: H; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: LIGHT CHAIN; COMPND 15 CHAIN: L; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 GENE: HA; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 9 ORGANISM_TAXID: 11320; SOURCE 10 GENE: HA; SOURCE 11 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS ANTIBODY, INFLUENZA, HEMAGGLUTININ, STEM EPITOPE, VIRAL PROTEIN, KEYWDS 2 VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.D.HARSHBARGER,G.J.LOCKBAUM,D.T.DEMING,N.ATTATIPPAHOLKUN, AUTHOR 2 C.A.SCHIFFER,W.A.MARASCO REVDAT 3 03-APR-24 6WF0 1 REMARK REVDAT 2 09-JUN-21 6WF0 1 JRNL REVDAT 1 25-NOV-20 6WF0 0 JRNL AUTH W.D.HARSHBARGER,D.DEMING,G.J.LOCKBAUM,N.ATTATIPPAHOLKUN, JRNL AUTH 2 M.KAMKAEW,S.HOU,M.SOMASUNDARAN,J.P.WANG,R.W.FINBERG,Q.K.ZHU, JRNL AUTH 3 C.A.SCHIFFER,W.A.MARASCO JRNL TITL UNIQUE STRUCTURAL SOLUTION FROM A V H 3-30 ANTIBODY JRNL TITL 2 TARGETING THE HEMAGGLUTININ STEM OF INFLUENZA A VIRUSES. JRNL REF NAT COMMUN V. 12 559 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33495478 JRNL DOI 10.1038/S41467-020-20879-6 REMARK 2 REMARK 2 RESOLUTION. 3.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 23583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.430 REMARK 3 FREE R VALUE TEST SET COUNT : 1989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6600 - 8.3100 0.97 1541 141 0.2217 0.2490 REMARK 3 2 8.3100 - 6.6000 0.99 1546 148 0.2445 0.2678 REMARK 3 3 6.6000 - 5.7700 0.99 1544 138 0.2243 0.2530 REMARK 3 4 5.7700 - 5.2400 1.00 1541 140 0.2011 0.2625 REMARK 3 5 5.2400 - 4.8700 0.99 1544 139 0.1992 0.2838 REMARK 3 6 4.8700 - 4.5800 0.99 1558 143 0.1913 0.2906 REMARK 3 7 4.5800 - 4.3500 1.00 1532 142 0.2102 0.2519 REMARK 3 8 4.3500 - 4.1600 1.00 1563 146 0.2243 0.3168 REMARK 3 9 4.1600 - 4.0000 1.00 1546 144 0.2426 0.3003 REMARK 3 10 4.0000 - 3.8700 0.99 1516 146 0.2615 0.2971 REMARK 3 11 3.8700 - 3.7500 1.00 1544 136 0.2533 0.3292 REMARK 3 12 3.7400 - 3.6400 1.00 1539 146 0.2690 0.3083 REMARK 3 13 3.6400 - 3.5400 1.00 1551 144 0.2799 0.3272 REMARK 3 14 3.5400 - 3.4600 0.97 1529 136 0.3374 0.3818 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.412 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7325 REMARK 3 ANGLE : 0.653 9944 REMARK 3 CHIRALITY : 0.051 1146 REMARK 3 PLANARITY : 0.005 1269 REMARK 3 DIHEDRAL : 10.994 1090 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WF0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000247959. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97919 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23612 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.457 REMARK 200 RESOLUTION RANGE LOW (A) : 42.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.19600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.99200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 405I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-24% W/V PEG 3350, 0.2M KCN, AND REMARK 280 0.1M BIS-TRIS-PROPANE PH7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.27600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 94.27600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 94.27600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 55940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 121670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, L, C, D, E, F, G, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -130.31800 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -65.15900 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -112.85870 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 127 REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 GLY H 134 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 GLN L 108 CD OE1 NE2 REMARK 470 PRO L 109 CD REMARK 470 THR L 116 CG2 REMARK 470 LEU L 117 CD1 CD2 REMARK 470 GLU L 124 CD OE1 OE2 REMARK 470 GLN L 126 CD OE1 NE2 REMARK 470 ASN L 128 CG OD1 ND2 REMARK 470 LYS L 129 CD CE NZ REMARK 470 THR L 131 CG2 REMARK 470 LEU L 132 CD1 CD2 REMARK 470 ILE L 136 CG2 CD1 REMARK 470 VAL L 144 CG1 CG2 REMARK 470 THR L 145 CG2 REMARK 470 SER L 153 OG REMARK 470 PRO L 154 CD REMARK 470 VAL L 155 CG2 REMARK 470 LYS L 156 CD CE NZ REMARK 470 VAL L 159 CG2 REMARK 470 THR L 161 CG2 REMARK 470 PRO L 164 CD REMARK 470 LYS L 166 CD CE NZ REMARK 470 GLN L 167 CD OE1 NE2 REMARK 470 ASN L 169 OD1 ND2 REMARK 470 ASN L 170 OD1 ND2 REMARK 470 LYS L 171 CD CE NZ REMARK 470 TYR L 177 CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR L 181 CG2 REMARK 470 PRO L 182 CD REMARK 470 GLU L 183 CG CD OE1 OE2 REMARK 470 GLN L 184 CD OE1 NE2 REMARK 470 TRP L 185 CD1 CD2 NE1 CE2 CE3 CZ2 CZ3 REMARK 470 TRP L 185 CH2 REMARK 470 LYS L 186 CD CE NZ REMARK 470 ARG L 189 CD NE CZ NH1 NH2 REMARK 470 SER L 192 OG REMARK 470 GLN L 194 CD OE1 NE2 REMARK 470 GLU L 198 CD OE1 OE2 REMARK 470 THR L 201 CG2 REMARK 470 VAL L 202 CG2 REMARK 470 GLU L 203 CD OE1 OE2 REMARK 470 LYS L 204 CD CE NZ REMARK 470 VAL L 206 CG2 REMARK 470 PRO L 208 CD REMARK 470 THR L 209 CG2 REMARK 470 GLU L 210 CD OE1 OE2 REMARK 470 CYS L 211 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 76 51.39 -93.41 REMARK 500 SER A 146 -168.38 -160.46 REMARK 500 GLU B 30 30.47 -96.01 REMARK 500 PHE B 63 -64.38 -94.42 REMARK 500 ASN B 135 31.67 -94.81 REMARK 500 THR B 156 34.88 -99.99 REMARK 500 PHE H 102 148.03 -172.08 REMARK 500 ASP H 144 61.70 65.57 REMARK 500 PRO H 149 78.36 -66.04 REMARK 500 PRO H 202 40.91 -78.73 REMARK 500 ASN L 27B -63.39 -91.37 REMARK 500 ASN L 51 -14.47 71.73 REMARK 500 SER L 52 -4.19 -144.48 REMARK 500 ALA L 84 -167.64 -161.67 REMARK 500 PRO L 109 48.81 -73.06 REMARK 500 SER L 114 57.69 -95.31 REMARK 500 ASP L 138 65.16 61.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BMA C 3 DBREF1 6WF0 A 11 325 UNP A0A5P1MU07_9INFA DBREF2 6WF0 A A0A5P1MU07 27 341 DBREF1 6WF0 B 10 172 UNP A0A2P1E3C0_9INFA DBREF2 6WF0 B A0A2P1E3C0 339 501 DBREF 6WF0 H 1 218 PDB 6WF0 6WF0 1 218 DBREF 6WF0 L 3 211 PDB 6WF0 6WF0 3 211 SEQADV 6WF0 PRO A 9 UNP A0A5P1MU0 EXPRESSION TAG SEQADV 6WF0 GLY A 10 UNP A0A5P1MU0 EXPRESSION TAG SEQRES 1 A 317 PRO GLY ALA THR LEU CYS LEU GLY HIS HIS ALA VAL PRO SEQRES 2 A 317 ASN GLY THR ILE VAL LYS THR ILE THR ASN ASP GLN ILE SEQRES 3 A 317 GLU VAL THR ASN ALA THR GLU LEU VAL GLN ASN SER SER SEQRES 4 A 317 ILE GLY GLU ILE CYS ASP SER PRO HIS GLN ILE LEU ASP SEQRES 5 A 317 GLY GLU ASN CYS THR LEU ILE ASP ALA LEU LEU GLY ASP SEQRES 6 A 317 PRO GLN CYS ASP GLY PHE GLN ASN LYS LYS TRP ASP LEU SEQRES 7 A 317 PHE VAL GLU ARG SER LYS ALA TYR SER ASN CYS TYR PRO SEQRES 8 A 317 TYR ASP VAL PRO ASP TYR ALA SER LEU ARG SER LEU VAL SEQRES 9 A 317 ALA SER SER GLY THR LEU GLU PHE ASN ASN GLU SER PHE SEQRES 10 A 317 ASN TRP THR GLY VAL THR GLN ASN GLY THR SER SER ALA SEQRES 11 A 317 CYS ILE ARG ARG SER ASN ASN SER PHE PHE SER ARG LEU SEQRES 12 A 317 ASN TRP LEU THR HIS LEU ASN PHE LYS TYR PRO ALA LEU SEQRES 13 A 317 ASN VAL THR MET PRO ASN ASN GLU GLN PHE ASP LYS LEU SEQRES 14 A 317 TYR ILE TRP GLY VAL HIS HIS PRO GLY THR ASP LYS ASP SEQRES 15 A 317 GLN ILE PHE LEU TYR ALA GLN SER SER GLY ARG ILE THR SEQRES 16 A 317 VAL SER THR LYS ARG SER GLN GLN ALA VAL ILE PRO ASN SEQRES 17 A 317 ILE GLY SER ARG PRO ARG ILE ARG ASN ILE PRO SER ARG SEQRES 18 A 317 ILE SER ILE TYR TRP THR ILE VAL LYS PRO GLY ASP ILE SEQRES 19 A 317 LEU LEU ILE ASN SER THR GLY ASN LEU ILE ALA PRO ARG SEQRES 20 A 317 GLY TYR PHE LYS ILE ARG SER GLY LYS SER SER ILE MET SEQRES 21 A 317 ARG SER ASP ALA PRO ILE GLY LYS CYS ASN SER GLU CYS SEQRES 22 A 317 ILE THR PRO ASN GLY SER ILE PRO ASN ASP LYS PRO PHE SEQRES 23 A 317 GLN ASN VAL ASN ARG ILE THR TYR GLY ALA CYS PRO ARG SEQRES 24 A 317 TYR VAL LYS GLN SER THR LEU LYS LEU ALA THR GLY MET SEQRES 25 A 317 ARG ASN VAL PRO GLU SEQRES 1 B 163 ILE GLU ASN GLY TRP GLU GLY MET VAL ASP GLY TRP TYR SEQRES 2 B 163 GLY PHE ARG HIS GLN ASN SER GLU GLY ARG GLY GLN ALA SEQRES 3 B 163 ALA ASP LEU LYS SER THR GLN ALA ALA ILE ASP GLN ILE SEQRES 4 B 163 ASN GLY LYS LEU ASN ARG LEU ILE GLY LYS THR ASN GLU SEQRES 5 B 163 LYS PHE HIS GLN ILE GLU LYS GLU PHE SER GLU VAL GLU SEQRES 6 B 163 GLY ARG ILE GLN ASP LEU GLU LYS TYR VAL GLU ASP THR SEQRES 7 B 163 LYS ILE ASP LEU TRP SER TYR ASN ALA GLU LEU LEU VAL SEQRES 8 B 163 ALA LEU GLU ASN GLN HIS THR ILE ASP LEU THR ASP SER SEQRES 9 B 163 GLU MET ASN LYS LEU PHE GLU LYS THR LYS LYS GLN LEU SEQRES 10 B 163 ARG GLU ASN ALA GLU ASP MET GLY ASN GLY CYS PHE LYS SEQRES 11 B 163 ILE TYR HIS LYS CYS ASP ASN ALA CYS ILE GLY SER ILE SEQRES 12 B 163 ARG ASN GLY THR TYR ASP HIS ASP VAL TYR ARG ASP GLU SEQRES 13 B 163 ALA LEU ASN ASN ARG PHE GLN SEQRES 1 H 235 GLN VAL GLN LEU LEU GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 235 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 235 PHE THR PHE SER ASN TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 H 235 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ILE ILE SER SEQRES 5 H 235 PHE ASP GLY SER LYS LYS TYR TYR ALA ASN SER VAL LYS SEQRES 6 H 235 GLY ARG SER THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 235 LEU SER LEU GLN MET ASN SER LEU GLY PRO GLU ASP THR SEQRES 8 H 235 ALA LEU TYR TYR CYS ALA LYS LEU PRO SER PRO TYR TYR SEQRES 9 H 235 PHE ASP SER ARG PHE VAL TRP VAL ALA ALA SER ALA PHE SEQRES 10 H 235 HIS PHE TRP GLY GLN GLY ILE LEU VAL THR VAL SER SER SEQRES 11 H 235 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 12 H 235 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 13 H 235 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 14 H 235 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 15 H 235 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 16 H 235 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 17 H 235 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 18 H 235 THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS ASP SEQRES 19 H 235 LYS SEQRES 1 L 213 MET LEU THR GLN PRO PRO SER ALA SER GLY THR PRO GLY SEQRES 2 L 213 GLN ARG VAL THR ILE SER CYS SER GLY SER SER SER ASN SEQRES 3 L 213 ILE GLY GLY ASN THR VAL HIS TRP PHE GLN GLN LEU PRO SEQRES 4 L 213 GLY THR ALA PRO LYS LEU LEU ILE TYR THR ASN SER LEU SEQRES 5 L 213 ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SER LYS SEQRES 6 L 213 SER GLY THR SER ALA SER LEU ALA ILE SER GLY LEU GLN SEQRES 7 L 213 SER GLU ASP GLU ALA ASP TYR TYR CYS ALA ALA TRP ASP SEQRES 8 L 213 ASP SER LEU ASN GLY GLN VAL PHE GLY GLY GLY THR LYS SEQRES 9 L 213 LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SER VAL SEQRES 10 L 213 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 L 213 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 L 213 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 L 213 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 L 213 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 L 213 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 L 213 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 L 213 ALA PRO THR GLU CYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 10 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 12(C8 H15 N O6) FORMUL 5 BMA 4(C6 H12 O6) HELIX 1 AA1 THR A 65 GLY A 72 1 8 HELIX 2 AA2 ASP A 104 GLY A 116 1 13 HELIX 3 AA3 THR A 187 ALA A 196 1 10 HELIX 4 AA4 LEU B 38 ILE B 56 1 19 HELIX 5 AA5 GLY B 75 LEU B 126 1 52 HELIX 6 AA6 ASP B 145 ASN B 154 1 10 HELIX 7 AA7 ASP B 158 GLN B 172 1 15 HELIX 8 AA8 THR H 28 TYR H 32 5 5 HELIX 9 AA9 PRO H 98 ASP H 100B 5 5 HELIX 10 AB1 SER H 100C TRP H 100G 5 5 HELIX 11 AB2 PRO H 202 ASN H 204 5 3 HELIX 12 AB3 GLN L 79 GLU L 83 5 5 HELIX 13 AB4 GLU L 124 ASN L 128 5 5 HELIX 14 AB5 THR L 181 LYS L 186 1 6 SHEET 1 AA1 5 GLY B 31 ASP B 37 0 SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N PHE B 24 O ALA B 35 SHEET 3 AA1 5 THR A 12 HIS A 17 -1 N CYS A 14 O ARG B 25 SHEET 4 AA1 5 CYS B 137 ILE B 140 -1 O PHE B 138 N LEU A 13 SHEET 5 AA1 5 ALA B 130 ASP B 132 -1 N GLU B 131 O LYS B 139 SHEET 1 AA2 2 THR A 24 VAL A 26 0 SHEET 2 AA2 2 ILE A 34 VAL A 36 -1 O ILE A 34 N VAL A 26 SHEET 1 AA3 2 ALA A 39 GLU A 41 0 SHEET 2 AA3 2 LYS A 315 ALA A 317 -1 O LEU A 316 N THR A 40 SHEET 1 AA4 3 VAL A 43 GLN A 44 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLN A 44 SHEET 3 AA4 3 ARG A 307 TYR A 308 1 O ARG A 307 N GLN A 295 SHEET 1 AA5 3 ILE A 58 LEU A 59 0 SHEET 2 AA5 3 LEU A 86 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 AA5 3 SER A 266 ARG A 269 1 O MET A 268 N PHE A 87 SHEET 1 AA6 5 PHE A 120 ASN A 122 0 SHEET 2 AA6 5 GLY A 256 LYS A 259 -1 O TYR A 257 N ASN A 121 SHEET 3 AA6 5 LYS A 176 HIS A 184 -1 N LEU A 177 O PHE A 258 SHEET 4 AA6 5 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 AA6 5 LEU A 151 TRP A 153 -1 N ASN A 152 O ALA A 253 SHEET 1 AA7 4 PHE A 120 ASN A 122 0 SHEET 2 AA7 4 GLY A 256 LYS A 259 -1 O TYR A 257 N ASN A 121 SHEET 3 AA7 4 LYS A 176 HIS A 184 -1 N LEU A 177 O PHE A 258 SHEET 4 AA7 4 ARG A 229 VAL A 237 -1 O THR A 235 N TYR A 178 SHEET 1 AA8 2 SER A 136 ARG A 141 0 SHEET 2 AA8 2 ASN A 144 SER A 146 -1 O ASN A 144 N ARG A 141 SHEET 1 AA9 4 LEU A 164 PRO A 169 0 SHEET 2 AA9 4 ILE A 242 SER A 247 -1 O ILE A 245 N VAL A 166 SHEET 3 AA9 4 ILE A 202 THR A 206 -1 N THR A 203 O ASN A 246 SHEET 4 AA9 4 SER A 209 VAL A 213 -1 O SER A 209 N THR A 206 SHEET 1 AB1 3 GLY A 286 ILE A 288 0 SHEET 2 AB1 3 CYS A 281 THR A 283 -1 N CYS A 281 O ILE A 288 SHEET 3 AB1 3 TYR A 302 GLY A 303 -1 O TYR A 302 N ILE A 282 SHEET 1 AB2 4 GLN H 3 SER H 7 0 SHEET 2 AB2 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AB2 4 THR H 77 MET H 82 -1 O LEU H 78 N CYS H 22 SHEET 4 AB2 4 SER H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 AB3 6 GLY H 10 VAL H 11 0 SHEET 2 AB3 6 ILE H 107 THR H 110 1 O LEU H 108 N GLY H 10 SHEET 3 AB3 6 ALA H 88 LYS H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AB3 6 MET H 34 GLN H 39 -1 N GLN H 39 O LEU H 89 SHEET 5 AB3 6 GLU H 46 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AB3 6 LYS H 57 TYR H 59 -1 O TYR H 58 N ILE H 50 SHEET 1 AB4 4 GLY H 10 VAL H 11 0 SHEET 2 AB4 4 ILE H 107 THR H 110 1 O LEU H 108 N GLY H 10 SHEET 3 AB4 4 ALA H 88 LYS H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AB4 4 PHE H 102 TRP H 103 -1 O PHE H 102 N LYS H 94 SHEET 1 AB5 4 SER H 120 LEU H 124 0 SHEET 2 AB5 4 ALA H 137 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AB5 4 TYR H 176 THR H 183 -1 O LEU H 178 N VAL H 142 SHEET 4 AB5 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AB6 4 SER H 120 LEU H 124 0 SHEET 2 AB6 4 ALA H 137 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AB6 4 TYR H 176 THR H 183 -1 O LEU H 178 N VAL H 142 SHEET 4 AB6 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AB7 3 VAL H 150 TRP H 154 0 SHEET 2 AB7 3 TYR H 194 HIS H 200 -1 O ASN H 199 N THR H 151 SHEET 3 AB7 3 THR H 205 VAL H 211 -1 O VAL H 211 N TYR H 194 SHEET 1 AB8 5 SER L 9 SER L 12 0 SHEET 2 AB8 5 THR L 102 THR L 105 1 O LYS L 103 N ALA L 11 SHEET 3 AB8 5 ASP L 85 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AB8 5 VAL L 33 GLN L 38 -1 N GLN L 38 O ASP L 85 SHEET 5 AB8 5 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 1 AB9 4 SER L 9 SER L 12 0 SHEET 2 AB9 4 THR L 102 THR L 105 1 O LYS L 103 N ALA L 11 SHEET 3 AB9 4 ASP L 85 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AB9 4 GLY L 95B VAL L 97 -1 O GLY L 95B N ASP L 92 SHEET 1 AC1 3 VAL L 19 SER L 24 0 SHEET 2 AC1 3 SER L 70 ILE L 75 -1 O ALA L 71 N CYS L 23 SHEET 3 AC1 3 PHE L 62 SER L 67 -1 N SER L 67 O SER L 70 SHEET 1 AC2 4 THR L 116 PHE L 118 0 SHEET 2 AC2 4 ALA L 130 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 AC2 4 TYR L 172 LEU L 180 -1 O TYR L 172 N PHE L 139 SHEET 4 AC2 4 THR L 161 THR L 163 -1 N THR L 163 O ALA L 173 SHEET 1 AC3 2 VAL L 146 LYS L 149 0 SHEET 2 AC3 2 SER L 192 VAL L 195 -1 O GLN L 194 N ALA L 147 SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.03 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.03 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.02 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.03 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.03 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.25 SSBOND 7 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 8 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 9 CYS L 23 CYS L 88 1555 1555 2.07 SSBOND 10 CYS L 134 CYS L 193 1555 1555 2.03 LINK ND2 ASN A 38 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN A 63 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 133 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN A 165 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN A 246 C1 NAG I 1 1555 1555 1.47 LINK ND2 ASN A 285 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.42 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.44 CISPEP 1 SER A 54 PRO A 55 0 1.82 CRYST1 130.318 130.318 188.552 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007674 0.004430 0.000000 0.00000 SCALE2 0.000000 0.008861 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005304 0.00000