HEADER GENE REGULATION 05-APR-20 6WG7 TITLE COORDINATES OF NANR DIMER FITTED IN HEXAMERIC NANR-DNA HETERO-COMPLEX TITLE 2 CRYO-EM MAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (35-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (35-MER); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REPRESSOR NANR; COMPND 11 CHAIN: C, D, E, G, F, H; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 GENE: YHCK, GLCC_1, GLCC_2, LUTR_1, LUTR_2, NANR, NANR_2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS NANR DIMER-DNA HETERO-COMPLEX, TRANSCRIPTIONAL REGULATOR, GNTR KEYWDS 2 SUPERFAMILY, SIALIC ACID, NEU5AC, COOPERATIVITY, GENE REGULATION., KEYWDS 3 GENE REGULATION EXPDTA ELECTRON MICROSCOPY AUTHOR V.HARIPRASAD,C.HORNE,P.SANTOSH,H.AMY,B.EMRE,N.RACHEL,G.MICHAEL, AUTHOR 2 R.GEORG,D.BORRIES,D.RENWICK REVDAT 3 06-MAR-24 6WG7 1 REMARK REVDAT 2 14-APR-21 6WG7 1 JRNL REVDAT 1 10-MAR-21 6WG7 0 JRNL AUTH C.R.HORNE,H.VENUGOPAL,S.PANJIKAR,D.M.WOOD,A.HENRICKSON, JRNL AUTH 2 E.BROOKES,R.A.NORTH,J.M.MURPHY,R.FRIEMANN,M.D.W.GRIFFIN, JRNL AUTH 3 G.RAMM,B.DEMELER,R.C.J.DOBSON JRNL TITL MECHANISM OF NANR GENE REPRESSION AND ALLOSTERIC INDUCTION JRNL TITL 2 OF BACTERIAL SIALIC ACID METABOLISM. JRNL REF NAT COMMUN V. 12 1988 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33790291 JRNL DOI 10.1038/S41467-021-22253-6 REMARK 2 REMARK 2 RESOLUTION. 8.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6WFQ REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 8.300 REMARK 3 NUMBER OF PARTICLES : 48931 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6WG7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248148. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HEXAMERIC NANR-DNA HETERO REMARK 245 -COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT FORCE: -3 BLOT TIME: 3 SEC REMARK 245 DRAIN TIME: 0 REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : HEXAMERIC NANR-DNA HETERO REMARK 245 -COMPLEX REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2287 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS TALOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, G, F, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 LEU C 3 REMARK 465 MET C 4 REMARK 465 ASN C 5 REMARK 465 ALA C 6 REMARK 465 PHE C 7 REMARK 465 ASP C 8 REMARK 465 SER C 9 REMARK 465 GLN C 10 REMARK 465 THR C 11 REMARK 465 GLU C 12 REMARK 465 ASP C 13 REMARK 465 SER C 14 REMARK 465 SER C 15 REMARK 465 PRO C 16 REMARK 465 ALA C 17 REMARK 465 ILE C 18 REMARK 465 GLY C 19 REMARK 465 ARG C 20 REMARK 465 SER C 249 REMARK 465 ALA C 250 REMARK 465 THR C 251 REMARK 465 TRP C 252 REMARK 465 HIS C 253 REMARK 465 ALA C 254 REMARK 465 PHE C 255 REMARK 465 GLY C 256 REMARK 465 GLN C 257 REMARK 465 THR C 258 REMARK 465 THR C 259 REMARK 465 ASN C 260 REMARK 465 LYS C 261 REMARK 465 LYS C 262 REMARK 465 LYS C 263 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 LEU D 3 REMARK 465 MET D 4 REMARK 465 ASN D 5 REMARK 465 ALA D 6 REMARK 465 PHE D 7 REMARK 465 ASP D 8 REMARK 465 SER D 9 REMARK 465 GLN D 10 REMARK 465 THR D 11 REMARK 465 GLU D 12 REMARK 465 ASP D 13 REMARK 465 SER D 14 REMARK 465 SER D 15 REMARK 465 PRO D 16 REMARK 465 ALA D 17 REMARK 465 ILE D 18 REMARK 465 GLY D 19 REMARK 465 ARG D 20 REMARK 465 ASN D 21 REMARK 465 LEU D 22 REMARK 465 ARG D 23 REMARK 465 SER D 24 REMARK 465 ARG D 25 REMARK 465 PRO D 26 REMARK 465 LEU D 27 REMARK 465 ALA D 28 REMARK 465 ARG D 29 REMARK 465 SER D 249 REMARK 465 ALA D 250 REMARK 465 THR D 251 REMARK 465 TRP D 252 REMARK 465 HIS D 253 REMARK 465 ALA D 254 REMARK 465 PHE D 255 REMARK 465 GLY D 256 REMARK 465 GLN D 257 REMARK 465 THR D 258 REMARK 465 THR D 259 REMARK 465 ASN D 260 REMARK 465 LYS D 261 REMARK 465 LYS D 262 REMARK 465 LYS D 263 REMARK 465 MET E 1 REMARK 465 GLY E 2 REMARK 465 LEU E 3 REMARK 465 MET E 4 REMARK 465 ASN E 5 REMARK 465 ALA E 6 REMARK 465 PHE E 7 REMARK 465 ASP E 8 REMARK 465 SER E 9 REMARK 465 GLN E 10 REMARK 465 THR E 11 REMARK 465 GLU E 12 REMARK 465 ASP E 13 REMARK 465 SER E 14 REMARK 465 SER E 15 REMARK 465 PRO E 16 REMARK 465 ALA E 17 REMARK 465 ILE E 18 REMARK 465 GLY E 19 REMARK 465 ARG E 20 REMARK 465 SER E 249 REMARK 465 ALA E 250 REMARK 465 THR E 251 REMARK 465 TRP E 252 REMARK 465 HIS E 253 REMARK 465 ALA E 254 REMARK 465 PHE E 255 REMARK 465 GLY E 256 REMARK 465 GLN E 257 REMARK 465 THR E 258 REMARK 465 THR E 259 REMARK 465 ASN E 260 REMARK 465 LYS E 261 REMARK 465 LYS E 262 REMARK 465 LYS E 263 REMARK 465 MET G 1 REMARK 465 GLY G 2 REMARK 465 LEU G 3 REMARK 465 MET G 4 REMARK 465 ASN G 5 REMARK 465 ALA G 6 REMARK 465 PHE G 7 REMARK 465 ASP G 8 REMARK 465 SER G 9 REMARK 465 GLN G 10 REMARK 465 THR G 11 REMARK 465 GLU G 12 REMARK 465 ASP G 13 REMARK 465 SER G 14 REMARK 465 SER G 15 REMARK 465 PRO G 16 REMARK 465 ALA G 17 REMARK 465 ILE G 18 REMARK 465 GLY G 19 REMARK 465 ARG G 20 REMARK 465 ASN G 21 REMARK 465 LEU G 22 REMARK 465 ARG G 23 REMARK 465 SER G 24 REMARK 465 ARG G 25 REMARK 465 PRO G 26 REMARK 465 LEU G 27 REMARK 465 ALA G 28 REMARK 465 ARG G 29 REMARK 465 SER G 249 REMARK 465 ALA G 250 REMARK 465 THR G 251 REMARK 465 TRP G 252 REMARK 465 HIS G 253 REMARK 465 ALA G 254 REMARK 465 PHE G 255 REMARK 465 GLY G 256 REMARK 465 GLN G 257 REMARK 465 THR G 258 REMARK 465 THR G 259 REMARK 465 ASN G 260 REMARK 465 LYS G 261 REMARK 465 LYS G 262 REMARK 465 LYS G 263 REMARK 465 MET F 1 REMARK 465 GLY F 2 REMARK 465 LEU F 3 REMARK 465 MET F 4 REMARK 465 ASN F 5 REMARK 465 ALA F 6 REMARK 465 PHE F 7 REMARK 465 ASP F 8 REMARK 465 SER F 9 REMARK 465 GLN F 10 REMARK 465 THR F 11 REMARK 465 GLU F 12 REMARK 465 ASP F 13 REMARK 465 SER F 14 REMARK 465 SER F 15 REMARK 465 PRO F 16 REMARK 465 ALA F 17 REMARK 465 ILE F 18 REMARK 465 GLY F 19 REMARK 465 ARG F 20 REMARK 465 SER F 249 REMARK 465 ALA F 250 REMARK 465 THR F 251 REMARK 465 TRP F 252 REMARK 465 HIS F 253 REMARK 465 ALA F 254 REMARK 465 PHE F 255 REMARK 465 GLY F 256 REMARK 465 GLN F 257 REMARK 465 THR F 258 REMARK 465 THR F 259 REMARK 465 ASN F 260 REMARK 465 LYS F 261 REMARK 465 LYS F 262 REMARK 465 LYS F 263 REMARK 465 MET H 1 REMARK 465 GLY H 2 REMARK 465 LEU H 3 REMARK 465 MET H 4 REMARK 465 ASN H 5 REMARK 465 ALA H 6 REMARK 465 PHE H 7 REMARK 465 ASP H 8 REMARK 465 SER H 9 REMARK 465 GLN H 10 REMARK 465 THR H 11 REMARK 465 GLU H 12 REMARK 465 ASP H 13 REMARK 465 SER H 14 REMARK 465 SER H 15 REMARK 465 PRO H 16 REMARK 465 ALA H 17 REMARK 465 ILE H 18 REMARK 465 GLY H 19 REMARK 465 ARG H 20 REMARK 465 ASN H 21 REMARK 465 LEU H 22 REMARK 465 ARG H 23 REMARK 465 SER H 24 REMARK 465 ARG H 25 REMARK 465 PRO H 26 REMARK 465 LEU H 27 REMARK 465 ALA H 28 REMARK 465 ARG H 29 REMARK 465 SER H 249 REMARK 465 ALA H 250 REMARK 465 THR H 251 REMARK 465 TRP H 252 REMARK 465 HIS H 253 REMARK 465 ALA H 254 REMARK 465 PHE H 255 REMARK 465 GLY H 256 REMARK 465 GLN H 257 REMARK 465 THR H 258 REMARK 465 THR H 259 REMARK 465 ASN H 260 REMARK 465 LYS H 261 REMARK 465 LYS H 262 REMARK 465 LYS H 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C2' DA A 14 OE2 GLU F 58 0.42 REMARK 500 N THR C 207 C THR F 205 0.44 REMARK 500 O4 DT A 27 CG ARG G 69 0.50 REMARK 500 C6 DT B 6 CZ ARG G 59 0.57 REMARK 500 C6 DT B 23 NH2 ARG C 73 0.62 REMARK 500 CG LYS D 30 CA LYS H 30 0.63 REMARK 500 OP2 DT B 6 CB SER G 57 0.67 REMARK 500 C VAL C 206 N VAL F 206 0.71 REMARK 500 N1 DT B 6 NH1 ARG G 59 0.77 REMARK 500 CA THR C 207 O THR F 205 0.77 REMARK 500 C6 DT B 6 NE ARG G 59 0.78 REMARK 500 N4 DC A 15 NH2 ARG F 69 0.79 REMARK 500 N4 DC A 15 CZ ARG F 69 0.81 REMARK 500 N6 DA A 28 CZ ARG G 69 0.82 REMARK 500 C2' DA A 14 CD GLU F 58 0.83 REMARK 500 OP1 DG B 21 NH2 ARG C 92 0.84 REMARK 500 OP2 DA B 9 NH1 ARG G 73 0.84 REMARK 500 O6 DG A 26 CD PRO G 70 0.89 REMARK 500 O THR C 205 O VAL F 206 0.90 REMARK 500 P DG B 21 NH2 ARG C 92 0.94 REMARK 500 P DA A 14 CB SER F 57 0.97 REMARK 500 C1' DT B 6 NH1 ARG G 59 0.98 REMARK 500 O LEU E 162 CB PRO H 204 0.99 REMARK 500 OP2 DG A 9 NH1 ARG D 73 1.01 REMARK 500 P DT B 6 CB SER G 57 1.06 REMARK 500 C5 DT B 6 NE ARG G 59 1.07 REMARK 500 N1 DT B 6 CZ ARG G 59 1.08 REMARK 500 OP2 DA A 14 CB SER F 57 1.09 REMARK 500 N THR C 207 N VAL F 206 1.10 REMARK 500 OP2 DA A 14 OG SER F 57 1.12 REMARK 500 N6 DA A 28 NH1 ARG G 69 1.13 REMARK 500 OP1 DG B 21 CZ ARG C 92 1.14 REMARK 500 C2' DT B 23 NH1 ARG C 73 1.15 REMARK 500 O5' DT B 16 NZ LYS F 31 1.16 REMARK 500 C5' DT A 21 NH2 ARG E 92 1.17 REMARK 500 CD LYS D 30 CA LYS H 30 1.17 REMARK 500 O4 DT A 27 CB ARG G 69 1.19 REMARK 500 C3' DA A 14 OE2 GLU F 58 1.20 REMARK 500 OP2 DA B 9 CZ ARG G 73 1.20 REMARK 500 C4 DT A 27 CG ARG G 69 1.21 REMARK 500 CG LYS D 30 CB LYS H 30 1.22 REMARK 500 OP2 DT B 6 OG SER G 57 1.25 REMARK 500 C4 DT B 25 CG PRO D 70 1.25 REMARK 500 O THR C 205 C VAL F 206 1.25 REMARK 500 CD LYS D 30 N LYS H 30 1.26 REMARK 500 C5' DA B 24 OD1 ASN F 89 1.27 REMARK 500 C8 DA A 16 NE ARG F 73 1.28 REMARK 500 C4' DT B 16 CB ASN E 89 1.28 REMARK 500 P DA A 14 OG SER F 57 1.28 REMARK 500 N THR C 207 O THR F 205 1.28 REMARK 500 REMARK 500 THIS ENTRY HAS 327 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS C 31 91.04 61.76 REMARK 500 GLU C 53 31.47 -91.28 REMARK 500 PRO C 56 -178.86 -69.47 REMARK 500 VAL C 67 -167.54 -122.73 REMARK 500 LEU C 84 -33.85 -134.83 REMARK 500 ASN C 88 -81.72 -126.45 REMARK 500 LEU C 107 -147.10 -81.97 REMARK 500 HIS C 142 43.29 -94.08 REMARK 500 ASN C 165 -129.46 -90.01 REMARK 500 ASP C 208 74.27 -102.23 REMARK 500 ASN D 89 -84.44 -126.46 REMARK 500 LYS D 112 -33.10 -138.39 REMARK 500 ASP D 145 -25.62 -157.12 REMARK 500 HIS D 232 60.07 60.27 REMARK 500 LYS E 31 91.09 61.71 REMARK 500 GLU E 53 31.53 -91.27 REMARK 500 PRO E 56 -178.90 -69.51 REMARK 500 VAL E 67 -167.57 -122.66 REMARK 500 LEU E 84 -33.88 -134.83 REMARK 500 ASN E 88 -81.68 -126.53 REMARK 500 LEU E 107 -147.10 -81.97 REMARK 500 HIS E 142 43.26 -93.98 REMARK 500 ASN E 165 -129.46 -90.05 REMARK 500 ASP E 208 74.18 -102.14 REMARK 500 ASN G 89 -84.46 -126.47 REMARK 500 LYS G 112 -33.11 -138.44 REMARK 500 ASP G 145 -25.56 -157.09 REMARK 500 HIS G 232 60.13 60.22 REMARK 500 LYS F 31 91.05 61.74 REMARK 500 GLU F 53 31.50 -91.30 REMARK 500 PRO F 56 -178.91 -69.51 REMARK 500 VAL F 67 -167.58 -122.69 REMARK 500 LEU F 84 -33.81 -134.88 REMARK 500 ASN F 88 -81.72 -126.55 REMARK 500 LEU F 107 -147.08 -81.95 REMARK 500 HIS F 142 43.32 -94.08 REMARK 500 ASN F 165 -129.47 -90.07 REMARK 500 ASP F 208 74.20 -102.11 REMARK 500 ASN H 89 -84.42 -126.46 REMARK 500 LYS H 112 -33.16 -138.43 REMARK 500 ASP H 145 -25.55 -157.11 REMARK 500 HIS H 232 60.11 60.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-21652 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-21661 RELATED DB: EMDB REMARK 900 COORDINATES OF NANR DIMER FITTED IN HEXAMERIC NANR-DNA HETERO- REMARK 900 COMPLEX CRYO-EM MAP DBREF 6WG7 A 1 35 PDB 6WG7 6WG7 1 35 DBREF 6WG7 B 1 35 PDB 6WG7 6WG7 1 35 DBREF 6WG7 C 1 263 UNP J7QHT8 J7QHT8_ECOLX 1 263 DBREF 6WG7 D 1 263 UNP J7QHT8 J7QHT8_ECOLX 1 263 DBREF 6WG7 E 1 263 UNP J7QHT8 J7QHT8_ECOLX 1 263 DBREF 6WG7 G 1 263 UNP J7QHT8 J7QHT8_ECOLX 1 263 DBREF 6WG7 F 1 263 UNP J7QHT8 J7QHT8_ECOLX 1 263 DBREF 6WG7 H 1 263 UNP J7QHT8 J7QHT8_ECOLX 1 263 SEQRES 1 A 35 DT DT DG DA DT DC DT DG DG DT DA DT DA SEQRES 2 A 35 DA DC DA DG DG DT DA DT DA DA DA DG DG SEQRES 3 A 35 DT DA DT DA DT DC DG DT DT SEQRES 1 B 35 DA DA DC DG DA DT DA DT DA DC DC DT DT SEQRES 2 B 35 DT DA DT DA DC DC DT DG DT DT DA DT DA SEQRES 3 B 35 DC DC DA DG DA DT DC DA DA SEQRES 1 C 263 MET GLY LEU MET ASN ALA PHE ASP SER GLN THR GLU ASP SEQRES 2 C 263 SER SER PRO ALA ILE GLY ARG ASN LEU ARG SER ARG PRO SEQRES 3 C 263 LEU ALA ARG LYS LYS LEU SER GLU MET VAL GLU GLU GLU SEQRES 4 C 263 LEU GLU GLN MET ILE ARG ARG ARG GLU PHE GLY GLU GLY SEQRES 5 C 263 GLU GLN LEU PRO SER GLU ARG GLU LEU MET ALA PHE PHE SEQRES 6 C 263 ASN VAL GLY ARG PRO SER VAL ARG GLU ALA LEU ALA ALA SEQRES 7 C 263 LEU LYS ARG LYS GLY LEU VAL GLN ILE ASN ASN GLY GLU SEQRES 8 C 263 ARG ALA ARG VAL SER ARG PRO SER ALA ASP THR ILE ILE SEQRES 9 C 263 GLY GLU LEU SER GLY MET ALA LYS ASP PHE LEU SER HIS SEQRES 10 C 263 PRO GLY GLY ILE ALA HIS PHE GLU GLN LEU ARG LEU PHE SEQRES 11 C 263 PHE GLU SER SER LEU VAL ARG TYR ALA ALA GLU HIS ALA SEQRES 12 C 263 THR ASP GLU GLN ILE ASP LEU LEU ALA LYS ALA LEU GLU SEQRES 13 C 263 ILE ASN SER GLN SER LEU ASP ASN ASN ALA ALA PHE ILE SEQRES 14 C 263 ARG SER ASP VAL ASP PHE HIS ARG VAL LEU ALA GLU ILE SEQRES 15 C 263 PRO GLY ASN PRO ILE PHE MET ALA ILE HIS VAL ALA LEU SEQRES 16 C 263 LEU ASP TRP LEU ILE ALA ALA ARG PRO THR VAL THR ASP SEQRES 17 C 263 GLN ALA LEU HIS GLU HIS ASN ASN VAL SER TYR GLN GLN SEQRES 18 C 263 HIS ILE ALA ILE VAL ASP ALA ILE ARG ARG HIS ASP PRO SEQRES 19 C 263 ASP GLU ALA ASP ARG ALA LEU GLN SER HIS LEU ASN SER SEQRES 20 C 263 VAL SER ALA THR TRP HIS ALA PHE GLY GLN THR THR ASN SEQRES 21 C 263 LYS LYS LYS SEQRES 1 D 263 MET GLY LEU MET ASN ALA PHE ASP SER GLN THR GLU ASP SEQRES 2 D 263 SER SER PRO ALA ILE GLY ARG ASN LEU ARG SER ARG PRO SEQRES 3 D 263 LEU ALA ARG LYS LYS LEU SER GLU MET VAL GLU GLU GLU SEQRES 4 D 263 LEU GLU GLN MET ILE ARG ARG ARG GLU PHE GLY GLU GLY SEQRES 5 D 263 GLU GLN LEU PRO SER GLU ARG GLU LEU MET ALA PHE PHE SEQRES 6 D 263 ASN VAL GLY ARG PRO SER VAL ARG GLU ALA LEU ALA ALA SEQRES 7 D 263 LEU LYS ARG LYS GLY LEU VAL GLN ILE ASN ASN GLY GLU SEQRES 8 D 263 ARG ALA ARG VAL SER ARG PRO SER ALA ASP THR ILE ILE SEQRES 9 D 263 GLY GLU LEU SER GLY MET ALA LYS ASP PHE LEU SER HIS SEQRES 10 D 263 PRO GLY GLY ILE ALA HIS PHE GLU GLN LEU ARG LEU PHE SEQRES 11 D 263 PHE GLU SER SER LEU VAL ARG TYR ALA ALA GLU HIS ALA SEQRES 12 D 263 THR ASP GLU GLN ILE ASP LEU LEU ALA LYS ALA LEU GLU SEQRES 13 D 263 ILE ASN SER GLN SER LEU ASP ASN ASN ALA ALA PHE ILE SEQRES 14 D 263 ARG SER ASP VAL ASP PHE HIS ARG VAL LEU ALA GLU ILE SEQRES 15 D 263 PRO GLY ASN PRO ILE PHE MET ALA ILE HIS VAL ALA LEU SEQRES 16 D 263 LEU ASP TRP LEU ILE ALA ALA ARG PRO THR VAL THR ASP SEQRES 17 D 263 GLN ALA LEU HIS GLU HIS ASN ASN VAL SER TYR GLN GLN SEQRES 18 D 263 HIS ILE ALA ILE VAL ASP ALA ILE ARG ARG HIS ASP PRO SEQRES 19 D 263 ASP GLU ALA ASP ARG ALA LEU GLN SER HIS LEU ASN SER SEQRES 20 D 263 VAL SER ALA THR TRP HIS ALA PHE GLY GLN THR THR ASN SEQRES 21 D 263 LYS LYS LYS SEQRES 1 E 263 MET GLY LEU MET ASN ALA PHE ASP SER GLN THR GLU ASP SEQRES 2 E 263 SER SER PRO ALA ILE GLY ARG ASN LEU ARG SER ARG PRO SEQRES 3 E 263 LEU ALA ARG LYS LYS LEU SER GLU MET VAL GLU GLU GLU SEQRES 4 E 263 LEU GLU GLN MET ILE ARG ARG ARG GLU PHE GLY GLU GLY SEQRES 5 E 263 GLU GLN LEU PRO SER GLU ARG GLU LEU MET ALA PHE PHE SEQRES 6 E 263 ASN VAL GLY ARG PRO SER VAL ARG GLU ALA LEU ALA ALA SEQRES 7 E 263 LEU LYS ARG LYS GLY LEU VAL GLN ILE ASN ASN GLY GLU SEQRES 8 E 263 ARG ALA ARG VAL SER ARG PRO SER ALA ASP THR ILE ILE SEQRES 9 E 263 GLY GLU LEU SER GLY MET ALA LYS ASP PHE LEU SER HIS SEQRES 10 E 263 PRO GLY GLY ILE ALA HIS PHE GLU GLN LEU ARG LEU PHE SEQRES 11 E 263 PHE GLU SER SER LEU VAL ARG TYR ALA ALA GLU HIS ALA SEQRES 12 E 263 THR ASP GLU GLN ILE ASP LEU LEU ALA LYS ALA LEU GLU SEQRES 13 E 263 ILE ASN SER GLN SER LEU ASP ASN ASN ALA ALA PHE ILE SEQRES 14 E 263 ARG SER ASP VAL ASP PHE HIS ARG VAL LEU ALA GLU ILE SEQRES 15 E 263 PRO GLY ASN PRO ILE PHE MET ALA ILE HIS VAL ALA LEU SEQRES 16 E 263 LEU ASP TRP LEU ILE ALA ALA ARG PRO THR VAL THR ASP SEQRES 17 E 263 GLN ALA LEU HIS GLU HIS ASN ASN VAL SER TYR GLN GLN SEQRES 18 E 263 HIS ILE ALA ILE VAL ASP ALA ILE ARG ARG HIS ASP PRO SEQRES 19 E 263 ASP GLU ALA ASP ARG ALA LEU GLN SER HIS LEU ASN SER SEQRES 20 E 263 VAL SER ALA THR TRP HIS ALA PHE GLY GLN THR THR ASN SEQRES 21 E 263 LYS LYS LYS SEQRES 1 G 263 MET GLY LEU MET ASN ALA PHE ASP SER GLN THR GLU ASP SEQRES 2 G 263 SER SER PRO ALA ILE GLY ARG ASN LEU ARG SER ARG PRO SEQRES 3 G 263 LEU ALA ARG LYS LYS LEU SER GLU MET VAL GLU GLU GLU SEQRES 4 G 263 LEU GLU GLN MET ILE ARG ARG ARG GLU PHE GLY GLU GLY SEQRES 5 G 263 GLU GLN LEU PRO SER GLU ARG GLU LEU MET ALA PHE PHE SEQRES 6 G 263 ASN VAL GLY ARG PRO SER VAL ARG GLU ALA LEU ALA ALA SEQRES 7 G 263 LEU LYS ARG LYS GLY LEU VAL GLN ILE ASN ASN GLY GLU SEQRES 8 G 263 ARG ALA ARG VAL SER ARG PRO SER ALA ASP THR ILE ILE SEQRES 9 G 263 GLY GLU LEU SER GLY MET ALA LYS ASP PHE LEU SER HIS SEQRES 10 G 263 PRO GLY GLY ILE ALA HIS PHE GLU GLN LEU ARG LEU PHE SEQRES 11 G 263 PHE GLU SER SER LEU VAL ARG TYR ALA ALA GLU HIS ALA SEQRES 12 G 263 THR ASP GLU GLN ILE ASP LEU LEU ALA LYS ALA LEU GLU SEQRES 13 G 263 ILE ASN SER GLN SER LEU ASP ASN ASN ALA ALA PHE ILE SEQRES 14 G 263 ARG SER ASP VAL ASP PHE HIS ARG VAL LEU ALA GLU ILE SEQRES 15 G 263 PRO GLY ASN PRO ILE PHE MET ALA ILE HIS VAL ALA LEU SEQRES 16 G 263 LEU ASP TRP LEU ILE ALA ALA ARG PRO THR VAL THR ASP SEQRES 17 G 263 GLN ALA LEU HIS GLU HIS ASN ASN VAL SER TYR GLN GLN SEQRES 18 G 263 HIS ILE ALA ILE VAL ASP ALA ILE ARG ARG HIS ASP PRO SEQRES 19 G 263 ASP GLU ALA ASP ARG ALA LEU GLN SER HIS LEU ASN SER SEQRES 20 G 263 VAL SER ALA THR TRP HIS ALA PHE GLY GLN THR THR ASN SEQRES 21 G 263 LYS LYS LYS SEQRES 1 F 263 MET GLY LEU MET ASN ALA PHE ASP SER GLN THR GLU ASP SEQRES 2 F 263 SER SER PRO ALA ILE GLY ARG ASN LEU ARG SER ARG PRO SEQRES 3 F 263 LEU ALA ARG LYS LYS LEU SER GLU MET VAL GLU GLU GLU SEQRES 4 F 263 LEU GLU GLN MET ILE ARG ARG ARG GLU PHE GLY GLU GLY SEQRES 5 F 263 GLU GLN LEU PRO SER GLU ARG GLU LEU MET ALA PHE PHE SEQRES 6 F 263 ASN VAL GLY ARG PRO SER VAL ARG GLU ALA LEU ALA ALA SEQRES 7 F 263 LEU LYS ARG LYS GLY LEU VAL GLN ILE ASN ASN GLY GLU SEQRES 8 F 263 ARG ALA ARG VAL SER ARG PRO SER ALA ASP THR ILE ILE SEQRES 9 F 263 GLY GLU LEU SER GLY MET ALA LYS ASP PHE LEU SER HIS SEQRES 10 F 263 PRO GLY GLY ILE ALA HIS PHE GLU GLN LEU ARG LEU PHE SEQRES 11 F 263 PHE GLU SER SER LEU VAL ARG TYR ALA ALA GLU HIS ALA SEQRES 12 F 263 THR ASP GLU GLN ILE ASP LEU LEU ALA LYS ALA LEU GLU SEQRES 13 F 263 ILE ASN SER GLN SER LEU ASP ASN ASN ALA ALA PHE ILE SEQRES 14 F 263 ARG SER ASP VAL ASP PHE HIS ARG VAL LEU ALA GLU ILE SEQRES 15 F 263 PRO GLY ASN PRO ILE PHE MET ALA ILE HIS VAL ALA LEU SEQRES 16 F 263 LEU ASP TRP LEU ILE ALA ALA ARG PRO THR VAL THR ASP SEQRES 17 F 263 GLN ALA LEU HIS GLU HIS ASN ASN VAL SER TYR GLN GLN SEQRES 18 F 263 HIS ILE ALA ILE VAL ASP ALA ILE ARG ARG HIS ASP PRO SEQRES 19 F 263 ASP GLU ALA ASP ARG ALA LEU GLN SER HIS LEU ASN SER SEQRES 20 F 263 VAL SER ALA THR TRP HIS ALA PHE GLY GLN THR THR ASN SEQRES 21 F 263 LYS LYS LYS SEQRES 1 H 263 MET GLY LEU MET ASN ALA PHE ASP SER GLN THR GLU ASP SEQRES 2 H 263 SER SER PRO ALA ILE GLY ARG ASN LEU ARG SER ARG PRO SEQRES 3 H 263 LEU ALA ARG LYS LYS LEU SER GLU MET VAL GLU GLU GLU SEQRES 4 H 263 LEU GLU GLN MET ILE ARG ARG ARG GLU PHE GLY GLU GLY SEQRES 5 H 263 GLU GLN LEU PRO SER GLU ARG GLU LEU MET ALA PHE PHE SEQRES 6 H 263 ASN VAL GLY ARG PRO SER VAL ARG GLU ALA LEU ALA ALA SEQRES 7 H 263 LEU LYS ARG LYS GLY LEU VAL GLN ILE ASN ASN GLY GLU SEQRES 8 H 263 ARG ALA ARG VAL SER ARG PRO SER ALA ASP THR ILE ILE SEQRES 9 H 263 GLY GLU LEU SER GLY MET ALA LYS ASP PHE LEU SER HIS SEQRES 10 H 263 PRO GLY GLY ILE ALA HIS PHE GLU GLN LEU ARG LEU PHE SEQRES 11 H 263 PHE GLU SER SER LEU VAL ARG TYR ALA ALA GLU HIS ALA SEQRES 12 H 263 THR ASP GLU GLN ILE ASP LEU LEU ALA LYS ALA LEU GLU SEQRES 13 H 263 ILE ASN SER GLN SER LEU ASP ASN ASN ALA ALA PHE ILE SEQRES 14 H 263 ARG SER ASP VAL ASP PHE HIS ARG VAL LEU ALA GLU ILE SEQRES 15 H 263 PRO GLY ASN PRO ILE PHE MET ALA ILE HIS VAL ALA LEU SEQRES 16 H 263 LEU ASP TRP LEU ILE ALA ALA ARG PRO THR VAL THR ASP SEQRES 17 H 263 GLN ALA LEU HIS GLU HIS ASN ASN VAL SER TYR GLN GLN SEQRES 18 H 263 HIS ILE ALA ILE VAL ASP ALA ILE ARG ARG HIS ASP PRO SEQRES 19 H 263 ASP GLU ALA ASP ARG ALA LEU GLN SER HIS LEU ASN SER SEQRES 20 H 263 VAL SER ALA THR TRP HIS ALA PHE GLY GLN THR THR ASN SEQRES 21 H 263 LYS LYS LYS HELIX 1 AA1 LYS C 31 ARG C 46 1 16 HELIX 2 AA2 SER C 57 ASN C 66 1 10 HELIX 3 AA3 GLY C 68 GLY C 83 1 16 HELIX 4 AA4 SER C 99 LEU C 107 1 9 HELIX 5 AA5 MET C 110 HIS C 117 1 8 HELIX 6 AA6 GLY C 120 HIS C 142 1 23 HELIX 7 AA7 GLU C 146 ASN C 158 1 13 HELIX 8 AA8 ASN C 165 GLU C 181 1 17 HELIX 9 AA9 ASN C 185 ALA C 201 1 17 HELIX 10 AB1 ALA C 210 HIS C 232 1 23 HELIX 11 AB2 ASP C 233 VAL C 248 1 16 HELIX 12 AB3 LYS D 31 ARG D 46 1 16 HELIX 13 AB4 SER D 57 ASN D 66 1 10 HELIX 14 AB5 GLY D 68 GLY D 83 1 16 HELIX 15 AB6 SER D 99 ALA D 111 1 13 HELIX 16 AB7 GLY D 119 SER D 133 1 15 HELIX 17 AB8 TYR D 138 ALA D 143 1 6 HELIX 18 AB9 ASP D 145 SER D 161 1 17 HELIX 19 AC1 ALA D 166 GLU D 181 1 16 HELIX 20 AC2 ASN D 185 ARG D 203 1 19 HELIX 21 AC3 ASP D 208 ARG D 231 1 24 HELIX 22 AC4 ASP D 233 VAL D 248 1 16 HELIX 23 AC5 LYS E 31 ARG E 46 1 16 HELIX 24 AC6 SER E 57 ASN E 66 1 10 HELIX 25 AC7 GLY E 68 GLY E 83 1 16 HELIX 26 AC8 SER E 99 LEU E 107 1 9 HELIX 27 AC9 MET E 110 HIS E 117 1 8 HELIX 28 AD1 GLY E 120 HIS E 142 1 23 HELIX 29 AD2 GLU E 146 ASN E 158 1 13 HELIX 30 AD3 ASN E 165 GLU E 181 1 17 HELIX 31 AD4 ASN E 185 ALA E 201 1 17 HELIX 32 AD5 ALA E 210 HIS E 232 1 23 HELIX 33 AD6 ASP E 233 VAL E 248 1 16 HELIX 34 AD7 LYS G 31 ARG G 46 1 16 HELIX 35 AD8 SER G 57 ASN G 66 1 10 HELIX 36 AD9 GLY G 68 GLY G 83 1 16 HELIX 37 AE1 SER G 99 ALA G 111 1 13 HELIX 38 AE2 GLY G 119 SER G 133 1 15 HELIX 39 AE3 TYR G 138 ALA G 143 1 6 HELIX 40 AE4 ASP G 145 SER G 161 1 17 HELIX 41 AE5 ALA G 166 GLU G 181 1 16 HELIX 42 AE6 ASN G 185 ARG G 203 1 19 HELIX 43 AE7 ASP G 208 ARG G 231 1 24 HELIX 44 AE8 ASP G 233 VAL G 248 1 16 HELIX 45 AE9 LYS F 31 ARG F 46 1 16 HELIX 46 AF1 SER F 57 ASN F 66 1 10 HELIX 47 AF2 GLY F 68 GLY F 83 1 16 HELIX 48 AF3 SER F 99 LEU F 107 1 9 HELIX 49 AF4 MET F 110 HIS F 117 1 8 HELIX 50 AF5 GLY F 120 HIS F 142 1 23 HELIX 51 AF6 GLU F 146 ASN F 158 1 13 HELIX 52 AF7 ASN F 165 GLU F 181 1 17 HELIX 53 AF8 ASN F 185 ALA F 201 1 17 HELIX 54 AF9 ALA F 210 HIS F 232 1 23 HELIX 55 AG1 ASP F 233 VAL F 248 1 16 HELIX 56 AG2 LYS H 31 ARG H 46 1 16 HELIX 57 AG3 SER H 57 ASN H 66 1 10 HELIX 58 AG4 GLY H 68 GLY H 83 1 16 HELIX 59 AG5 SER H 99 ALA H 111 1 13 HELIX 60 AG6 GLY H 119 SER H 133 1 15 HELIX 61 AG7 TYR H 138 ALA H 143 1 6 HELIX 62 AG8 ASP H 145 SER H 161 1 17 HELIX 63 AG9 ALA H 166 GLU H 181 1 16 HELIX 64 AH1 ASN H 185 ARG H 203 1 19 HELIX 65 AH2 ASP H 208 ARG H 231 1 24 HELIX 66 AH3 ASP H 233 VAL H 248 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000