HEADER SUGAR BINDING PROTEIN 05-APR-20 6WGM TITLE CRYSTAL STRUCTURE OF A MARINE METAGENOME TRAP SOLUTE BINDING PROTEIN TITLE 2 SPECIFIC FOR PYROGLUTAMATE (SORCERER II GLOBAL OCEAN SAMPLING TITLE 3 EXPEDITION, UNIDENTIFIED MICROBE, SCF7180008839099) IN COMPLEX WITH TITLE 4 CO-PURIFIED PYROGLUTAMATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP-TYPE C4-DICARBOXYLATE TRANSPORT SYSTEM, PERIPLASMIC COMPND 3 COMPONENT; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: PYROGLUTAMATE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 GENE: HIMB100_00003270; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PRIL KEYWDS TRANSPORT PROTEIN, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.FEDOROV,M.W.VETTING,S.L.HOGLE,C.L.DUPONT,S.C.ALMO,A.GHOSH REVDAT 3 18-OCT-23 6WGM 1 REMARK REVDAT 2 13-MAY-20 6WGM 1 TITLE REVDAT 1 29-APR-20 6WGM 0 JRNL AUTH M.W.VETTING,E.FEDOROV,S.L.HOGLE,C.L.DUPONT,S.C.ALMO,A.GHOSH JRNL TITL CRYSTAL STRUCTURE OF A MARINE METAGENOME TRAP SOLUTE BINDING JRNL TITL 2 PROTEIN SPECIFIC FOR AROMATIC ACID LIGANDS (SORCERER II JRNL TITL 3 GLOBAL OCEAN SAMPLING EXPEDITION, UNIDENTIFIED MICROBE, JRNL TITL 4 GOS_140), IN COMPLEX WITH CO-PURIFIED PYROGLUTAMATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 67843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 3476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.3600 - 4.0900 0.99 2588 119 0.1253 0.1444 REMARK 3 2 4.0900 - 3.2500 1.00 2608 127 0.1269 0.1394 REMARK 3 3 3.2500 - 2.8400 1.00 2586 137 0.1471 0.1783 REMARK 3 4 2.8400 - 2.5800 1.00 2577 136 0.1496 0.1621 REMARK 3 5 2.5800 - 2.3900 1.00 2599 147 0.1413 0.1462 REMARK 3 6 2.3900 - 2.2500 1.00 2517 171 0.1453 0.1522 REMARK 3 7 2.2500 - 2.1400 1.00 2579 171 0.1366 0.1565 REMARK 3 8 2.1400 - 2.0500 1.00 2548 161 0.1425 0.1761 REMARK 3 9 2.0500 - 1.9700 1.00 2577 133 0.1426 0.1650 REMARK 3 10 1.9700 - 1.9000 1.00 2583 137 0.1477 0.1551 REMARK 3 11 1.9000 - 1.8400 1.00 2562 155 0.1450 0.1565 REMARK 3 12 1.8400 - 1.7900 1.00 2579 145 0.1521 0.1672 REMARK 3 13 1.7900 - 1.7400 1.00 2592 122 0.1519 0.1781 REMARK 3 14 1.7400 - 1.7000 1.00 2497 176 0.1644 0.1894 REMARK 3 15 1.7000 - 1.6600 1.00 2589 131 0.1571 0.1661 REMARK 3 16 1.6600 - 1.6200 1.00 2627 125 0.1643 0.1898 REMARK 3 17 1.6200 - 1.5900 1.00 2577 124 0.1697 0.2144 REMARK 3 18 1.5900 - 1.5600 1.00 2518 131 0.1779 0.1865 REMARK 3 19 1.5600 - 1.5300 1.00 2612 154 0.1966 0.2394 REMARK 3 20 1.5300 - 1.5100 1.00 2561 150 0.2045 0.2074 REMARK 3 21 1.5100 - 1.4800 1.00 2565 128 0.2233 0.2597 REMARK 3 22 1.4800 - 1.4600 1.00 2610 115 0.2350 0.2385 REMARK 3 23 1.4600 - 1.4400 1.00 2549 122 0.2480 0.2982 REMARK 3 24 1.4400 - 1.4200 0.99 2612 119 0.2766 0.2896 REMARK 3 25 1.4200 - 1.4000 1.00 2555 140 0.2945 0.3565 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2505 REMARK 3 ANGLE : 0.754 3385 REMARK 3 CHIRALITY : 0.073 360 REMARK 3 PLANARITY : 0.006 436 REMARK 3 DIHEDRAL : 6.477 357 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 20:91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.932 -14.024 13.249 REMARK 3 T TENSOR REMARK 3 T11: 0.1472 T22: 0.1182 REMARK 3 T33: 0.1269 T12: -0.0014 REMARK 3 T13: 0.0070 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 0.9313 L22: 1.3586 REMARK 3 L33: 1.7285 L12: 0.0384 REMARK 3 L13: 0.4061 L23: 0.3108 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: -0.1051 S13: -0.0493 REMARK 3 S21: 0.1761 S22: 0.0423 S23: 0.0457 REMARK 3 S31: 0.1886 S32: -0.1758 S33: -0.0151 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 92:124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.113 -1.672 -2.232 REMARK 3 T TENSOR REMARK 3 T11: 0.1654 T22: 0.1474 REMARK 3 T33: 0.1598 T12: -0.0353 REMARK 3 T13: -0.0033 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.0515 L22: 1.6944 REMARK 3 L33: 1.1393 L12: -0.1674 REMARK 3 L13: -0.2148 L23: 0.0675 REMARK 3 S TENSOR REMARK 3 S11: -0.0857 S12: 0.0239 S13: 0.0199 REMARK 3 S21: -0.0594 S22: 0.1123 S23: -0.0346 REMARK 3 S31: -0.0670 S32: 0.0858 S33: -0.0263 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 125:162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.876 -12.115 -7.026 REMARK 3 T TENSOR REMARK 3 T11: 0.1269 T22: 0.1337 REMARK 3 T33: 0.1236 T12: -0.0156 REMARK 3 T13: 0.0061 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.6580 L22: 0.7286 REMARK 3 L33: 1.2024 L12: 0.1042 REMARK 3 L13: 0.3539 L23: 0.1044 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: 0.1271 S13: -0.0328 REMARK 3 S21: -0.0797 S22: 0.1035 S23: -0.0417 REMARK 3 S31: 0.0557 S32: 0.0784 S33: -0.0478 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 163:244 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.411 -16.159 -4.986 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.1157 REMARK 3 T33: 0.1446 T12: -0.0142 REMARK 3 T13: 0.0007 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.5189 L22: 0.6827 REMARK 3 L33: 1.3065 L12: 0.0383 REMARK 3 L13: 0.2909 L23: 0.3088 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: 0.0828 S13: -0.0688 REMARK 3 S21: -0.0625 S22: 0.0595 S23: 0.0207 REMARK 3 S31: 0.1119 S32: 0.0716 S33: -0.0323 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 245:299 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.678 -15.744 -1.855 REMARK 3 T TENSOR REMARK 3 T11: 0.1856 T22: 0.2414 REMARK 3 T33: 0.2021 T12: 0.0148 REMARK 3 T13: 0.0042 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 0.1728 L22: 1.0069 REMARK 3 L33: 1.0535 L12: 0.1992 REMARK 3 L13: 0.3515 L23: 0.2545 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: 0.1067 S13: -0.0682 REMARK 3 S21: -0.0510 S22: 0.1750 S23: -0.1976 REMARK 3 S31: 0.1316 S32: 0.4311 S33: -0.0667 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 300:323 OR RESID 401:401 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.835 4.083 -8.162 REMARK 3 T TENSOR REMARK 3 T11: 0.1891 T22: 0.1853 REMARK 3 T33: 0.1786 T12: -0.0730 REMARK 3 T13: -0.0161 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 0.1787 L22: 1.6517 REMARK 3 L33: 0.6254 L12: -0.0001 REMARK 3 L13: -0.1399 L23: -0.6343 REMARK 3 S TENSOR REMARK 3 S11: -0.0869 S12: 0.0961 S13: 0.0736 REMARK 3 S21: -0.1711 S22: 0.0750 S23: -0.0440 REMARK 3 S31: -0.0897 S32: 0.0960 S33: 0.0078 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: INDIVIDUAL B-FACTORS, TLS, OCCUPANCIES REMARK 4 REMARK 4 6WGM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248165. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : DIAMOND (111) REMARK 200 OPTICS : KB MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO 720 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68041 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 38.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 1.78900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 12.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 2PFZ REMARK 200 REMARK 200 REMARK: HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.1M MALONIC ACID, 0.15 M AMMONIUM REMARK 280 CITRATE TRIBASIC, 0.072 M SUCCINIC ACID, 0.18 M DL-MALIC ACID, REMARK 280 0.24 M SODIUM ACETATE, 0.3 M SODIUM FORMATE, 0.096 M AMMONIUM REMARK 280 TARTRATE DIBASIC, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 292.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.63967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 129.27933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 96.95950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 161.59917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.31983 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 VAL A 11 REMARK 465 ASP A 12 REMARK 465 LEU A 13 REMARK 465 GLY A 14 REMARK 465 THR A 15 REMARK 465 GLU A 16 REMARK 465 ASN A 17 REMARK 465 LEU A 18 REMARK 465 TYR A 19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 167 -177.62 -171.30 REMARK 500 SER A 203 -177.67 -170.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PCA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 418 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IGA RELATED DB: PDB REMARK 900 GOS_131 REMARK 900 RELATED ID: 5IZZ RELATED DB: PDB REMARK 900 GOS_131 REMARK 900 RELATED ID: 5I5P RELATED DB: PDB REMARK 900 GOS_131 REMARK 900 RELATED ID: 5I7I RELATED DB: PDB REMARK 900 GOS_131 DBREF 6WGM A 24 323 UNP G5ZWD6 G5ZWD6_9PROT 24 323 SEQADV 6WGM MET A 1 UNP G5ZWD6 INITIATING METHIONINE SEQADV 6WGM HIS A 2 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM HIS A 3 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM HIS A 4 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM HIS A 5 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM HIS A 6 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM HIS A 7 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM SER A 8 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM SER A 9 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM GLY A 10 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM VAL A 11 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM ASP A 12 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM LEU A 13 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM GLY A 14 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM THR A 15 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM GLU A 16 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM ASN A 17 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM LEU A 18 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM TYR A 19 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM PHE A 20 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM GLN A 21 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM SER A 22 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM MET A 23 UNP G5ZWD6 EXPRESSION TAG SEQADV 6WGM ASP A 46 UNP G5ZWD6 GLU 46 CONFLICT SEQADV 6WGM ASP A 114 UNP G5ZWD6 ASN 114 CONFLICT SEQADV 6WGM SER A 218 UNP G5ZWD6 THR 218 CONFLICT SEQADV 6WGM ASP A 244 UNP G5ZWD6 GLU 244 CONFLICT SEQADV 6WGM ALA A 262 UNP G5ZWD6 SER 262 CONFLICT SEQADV 6WGM ASN A 270 UNP G5ZWD6 SER 270 CONFLICT SEQADV 6WGM ALA A 289 UNP G5ZWD6 GLY 289 CONFLICT SEQADV 6WGM SER A 296 UNP G5ZWD6 ALA 296 CONFLICT SEQRES 1 A 323 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 323 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS TRP ASP SEQRES 3 A 323 MET PRO MET ALA TYR ALA ALA THR ASN PHE HIS SER GLU SEQRES 4 A 323 HIS GLY VAL ILE PHE ALA ASP LYS VAL LYS ALA TYR THR SEQRES 5 A 323 GLY GLY LYS LEU GLU ILE THR THR HIS PRO GLY GLY SER SEQRES 6 A 323 LEU PHE LYS GLY GLY GLU ILE LYS ARG ALA VAL GLN THR SEQRES 7 A 323 GLY GLN ALA PRO ILE GLY GLU ARG PHE MET SER ALA HIS SEQRES 8 A 323 ALA ASN GLU ALA PRO LEU LEU GLY TRP ASP ASN LEU PRO SEQRES 9 A 323 PHE LEU ALA THR SER TYR GLU ASP ASN ASP LYS LEU TRP SEQRES 10 A 323 ALA ALA ALA LYS ASP LYS VAL ASN ALA GLN LEU ALA ASP SEQRES 11 A 323 LEU ASN LEU VAL ALA LEU TYR THR CYS PRO TRP PRO GLY SEQRES 12 A 323 GLN GLY PHE TYR PHE LYS LYS GLU VAL THR SER SER ALA SEQRES 13 A 323 ASP THR GLN GLY ILE LYS PHE ARG SER TYR ASN SER ALA SEQRES 14 A 323 THR ALA THR PHE ALA LYS GLU LEU GLY MET LEU PRO VAL SEQRES 15 A 323 GLN VAL GLU ALA ALA GLU LEU SER GLN ALA LEU ALA THR SEQRES 16 A 323 GLY VAL ALA GLU ALA PHE ILE SER SER GLY SER THR GLY SEQRES 17 A 323 TYR ASP ARG LYS VAL TRP GLU HIS LEU SER HIS TYR TYR SEQRES 18 A 323 LYS VAL ASN ALA TRP LEU PRO ARG ASN TYR VAL ILE ILE SEQRES 19 A 323 ASN LYS GLY ILE TYR GLU GLY LEU SER ASP ASP ILE ARG SEQRES 20 A 323 SER ALA LEU HIS LYS ALA ALA ASP GLU THR GLY ALA ALA SEQRES 21 A 323 CYS ALA ALA LYS SER ALA GLU LEU ALA ASN TRP TYR PHE SEQRES 22 A 323 GLU GLN LEU GLU ALA ASN GLY MET LYS VAL GLU ASP ALA SEQRES 23 A 323 GLY PRO ALA PHE LEU LYS GLU LEU LYS SER ILE GLY ALA SEQRES 24 A 323 LYS MET GLN ALA ASP TRP LEU ALA SER VAL GLY ALA ASP SEQRES 25 A 323 GLY GLN ALA ILE VAL ASP ALA TYR LYS LYS MET HET PCA A 401 9 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET CL A 408 1 HET FMT A 409 3 HET FMT A 410 3 HET FMT A 411 3 HET FMT A 412 3 HET FMT A 413 3 HET FMT A 414 3 HET FMT A 415 3 HET FMT A 416 3 HET FMT A 417 3 HET FMT A 418 3 HETNAM PCA PYROGLUTAMIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM FMT FORMIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PCA C5 H7 N O3 FORMUL 3 EDO 6(C2 H6 O2) FORMUL 9 CL CL 1- FORMUL 10 FMT 10(C H2 O2) FORMUL 20 HOH *296(H2 O) HELIX 1 AA1 ASN A 35 THR A 52 1 18 HELIX 2 AA2 LYS A 68 GLY A 70 5 3 HELIX 3 AA3 GLU A 71 THR A 78 1 8 HELIX 4 AA4 MET A 88 ALA A 92 5 5 HELIX 5 AA5 PRO A 96 LEU A 103 5 8 HELIX 6 AA6 SER A 109 LEU A 131 1 23 HELIX 7 AA7 SER A 154 THR A 158 5 5 HELIX 8 AA8 ASN A 167 LEU A 177 1 11 HELIX 9 AA9 GLU A 185 ALA A 187 5 3 HELIX 10 AB1 GLU A 188 THR A 195 1 8 HELIX 11 AB2 GLY A 205 ARG A 211 1 7 HELIX 12 AB3 VAL A 213 HIS A 216 5 4 HELIX 13 AB4 LYS A 236 GLY A 241 1 6 HELIX 14 AB5 ILE A 246 ASN A 279 1 34 HELIX 15 AB6 GLY A 287 ALA A 307 1 21 HELIX 16 AB7 ALA A 311 LYS A 322 1 12 SHEET 1 AA1 2 MET A 23 PRO A 28 0 SHEET 2 AA1 2 LEU A 56 HIS A 61 1 O GLU A 57 N MET A 23 SHEET 1 AA2 3 ILE A 83 ARG A 86 0 SHEET 2 AA2 3 ARG A 229 ASN A 235 -1 O ILE A 233 N GLY A 84 SHEET 3 AA2 3 LEU A 133 PRO A 140 -1 N TYR A 137 O VAL A 232 SHEET 1 AA3 6 LEU A 180 GLN A 183 0 SHEET 2 AA3 6 LYS A 162 SER A 165 1 N PHE A 163 O LEU A 180 SHEET 3 AA3 6 ALA A 200 SER A 203 1 O ALA A 200 N ARG A 164 SHEET 4 AA3 6 GLY A 145 PHE A 148 -1 N TYR A 147 O PHE A 201 SHEET 5 AA3 6 HIS A 219 TYR A 221 -1 O TYR A 221 N PHE A 146 SHEET 6 AA3 6 LYS A 282 GLU A 284 1 O LYS A 282 N TYR A 220 SITE 1 AC1 9 PHE A 87 TRP A 141 GLN A 144 ARG A 164 SITE 2 AC1 9 TYR A 166 SER A 203 SER A 204 THR A 207 SITE 3 AC1 9 HOH A 551 SITE 1 AC2 5 THR A 34 HOH A 504 HOH A 517 HOH A 519 SITE 2 AC2 5 HOH A 568 SITE 1 AC3 5 PHE A 105 LEU A 106 ALA A 107 THR A 108 SITE 2 AC3 5 ASP A 112 SITE 1 AC4 6 GLY A 99 ASN A 102 PRO A 104 MET A 301 SITE 2 AC4 6 TRP A 305 HOH A 629 SITE 1 AC5 6 TRP A 117 TYR A 137 THR A 138 HOH A 557 SITE 2 AC5 6 HOH A 558 HOH A 655 SITE 1 AC6 3 GLU A 39 LYS A 264 HOH A 504 SITE 1 AC7 4 GLU A 256 LYS A 321 FMT A 416 HOH A 522 SITE 1 AC8 9 SER A 89 ALA A 90 HIS A 91 ALA A 92 SITE 2 AC8 9 ASN A 93 ASN A 167 SER A 168 HOH A 501 SITE 3 AC8 9 HOH A 545 SITE 1 AC9 4 ILE A 58 THR A 59 THR A 60 HOH A 657 SITE 1 AD1 5 GLY A 63 GLY A 64 LYS A 68 GLU A 188 SITE 2 AD1 5 HOH A 587 SITE 1 AD2 6 TYR A 31 ALA A 32 ALA A 186 ARG A 211 SITE 2 AD2 6 HOH A 523 HOH A 599 SITE 1 AD3 3 TYR A 320 MET A 323 HOH A 509 SITE 1 AD4 4 GLY A 70 GLU A 71 HOH A 581 HOH A 603 SITE 1 AD5 9 PHE A 20 THR A 52 GLY A 53 LYS A 55 SITE 2 AD5 9 SER A 154 ALA A 156 HOH A 536 HOH A 554 SITE 3 AD5 9 HOH A 580 SITE 1 AD6 7 LYS A 47 LEU A 306 GLN A 314 VAL A 317 SITE 2 AD6 7 EDO A 407 HOH A 542 HOH A 647 SITE 1 AD7 3 LYS A 222 PHE A 273 GLU A 277 SITE 1 AD8 4 TRP A 214 GLU A 215 HIS A 216 LEU A 217 CRYST1 56.251 56.251 193.919 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017777 0.010264 0.000000 0.00000 SCALE2 0.000000 0.020528 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005157 0.00000