HEADER SIGNALING PROTEIN, HYDROLASE 08-APR-20 6WHE TITLE STRUCTURE OF PHOSPHOMIMETIC RAB8A GTPASE (T72E) IN THE GTP-BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAB-8A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ONCOGENE C-MEL; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAB8A, MEL, RAB8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAB GTPASE, MEMBRANE TRAFFICKING, LEUCINE-RICH REPEAT KINASE 2 KEYWDS 2 (LRRK2), SWITCH 2 PHOSPHORYLATION, EFFECTOR RECRUITMENT, GOLGI KEYWDS 3 MEMBRANES, CILIOGENESIS, PARKINSON'S DISEASE, RAB-INTERACTING KEYWDS 4 LYSOSOMAL PROTEIN-LIKE 2 (RILPL2), SIGNALING PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.WASCHBUSCH,A.R.KHAN REVDAT 4 18-OCT-23 6WHE 1 REMARK REVDAT 3 12-MAY-21 6WHE 1 JRNL REVDAT 2 05-MAY-21 6WHE 1 JRNL REVDAT 1 10-MAR-21 6WHE 0 JRNL AUTH D.WASCHBUSCH,E.PURLYTE,A.R.KHAN JRNL TITL DUAL ARGININE RECOGNITION OF LRRK2 PHOSPHORYLATED RAB JRNL TITL 2 GTPASES. JRNL REF BIOPHYS.J. V. 120 1846 2021 JRNL REFN ESSN 1542-0086 JRNL PMID 33887226 JRNL DOI 10.1016/J.BPJ.2021.03.030 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 32684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.9000 - 3.8900 0.88 2457 127 0.1476 0.1863 REMARK 3 2 3.8900 - 3.4000 0.91 2520 158 0.1649 0.2160 REMARK 3 3 3.4000 - 3.0900 0.89 2479 120 0.1687 0.1798 REMARK 3 4 3.0900 - 2.8700 0.90 2534 124 0.1853 0.2192 REMARK 3 5 2.8700 - 2.7000 0.92 2584 127 0.1900 0.2854 REMARK 3 6 2.7000 - 2.5600 0.93 2568 129 0.1904 0.2769 REMARK 3 7 2.5600 - 2.4500 0.94 2630 135 0.1949 0.2206 REMARK 3 8 2.4500 - 2.3600 0.93 2567 141 0.1920 0.2386 REMARK 3 9 2.3600 - 2.2800 0.94 2645 116 0.2020 0.2544 REMARK 3 10 2.2800 - 2.2100 0.96 2707 133 0.2156 0.2629 REMARK 3 11 2.2100 - 2.1400 0.96 2677 148 0.1944 0.2384 REMARK 3 12 2.1400 - 2.0900 0.96 2658 132 0.1935 0.2370 REMARK 3 13 2.0900 - 2.0400 0.95 2680 145 0.1920 0.2075 REMARK 3 14 2.0400 - 1.9900 0.97 2662 126 0.1864 0.2476 REMARK 3 15 1.9900 - 1.9500 0.97 2774 156 0.1954 0.2342 REMARK 3 16 1.9500 - 1.9100 0.97 2634 146 0.2113 0.2630 REMARK 3 17 1.9100 - 1.8700 0.98 2798 156 0.2192 0.3116 REMARK 3 18 1.8700 - 1.8400 0.97 2703 129 0.2109 0.2257 REMARK 3 19 1.8400 - 1.8100 0.98 2670 178 0.2028 0.2515 REMARK 3 20 1.8100 - 1.7800 0.98 2762 137 0.2114 0.2769 REMARK 3 21 1.7800 - 1.7500 0.98 2785 149 0.2147 0.2647 REMARK 3 22 1.7500 - 1.7300 0.81 2182 103 0.2378 0.2896 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2939 REMARK 3 ANGLE : 0.859 3959 REMARK 3 CHIRALITY : 0.056 436 REMARK 3 PLANARITY : 0.004 489 REMARK 3 DIHEDRAL : 25.580 1114 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -12.2038 -30.4102 1.4229 REMARK 3 T TENSOR REMARK 3 T11: 0.0765 T22: 0.1062 REMARK 3 T33: 0.0998 T12: -0.0095 REMARK 3 T13: -0.0133 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.1683 L22: 0.6047 REMARK 3 L33: 0.6621 L12: 0.0292 REMARK 3 L13: -0.1317 L23: -0.2037 REMARK 3 S TENSOR REMARK 3 S11: -0.0001 S12: -0.0049 S13: 0.0094 REMARK 3 S21: 0.0286 S22: 0.0075 S23: -0.0034 REMARK 3 S31: 0.0297 S32: -0.0265 S33: -0.0028 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WHE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248209. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979279 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 144140 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 29.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.44100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4LHW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.1M HEPES PH 7, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 59.18850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 176 REMARK 465 LEU A 177 REMARK 465 GLU A 178 REMARK 465 GLY A 179 REMARK 465 ASN A 180 REMARK 465 SER A 181 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLY B 179 REMARK 465 ASN B 180 REMARK 465 SER B 181 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU A 13 CA CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1003 O HOH A 1123 2.12 REMARK 500 O ASN B 34 O HOH B 301 2.15 REMARK 500 O HOH A 1111 O HOH B 414 2.16 REMARK 500 O HOH A 1036 O HOH A 1134 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 109 -45.12 -132.97 REMARK 500 LYS A 122 35.24 71.32 REMARK 500 VAL A 125 60.21 -100.34 REMARK 500 LYS B 122 32.64 72.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1153 DISTANCE = 6.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 22 OG1 REMARK 620 2 THR A 40 OG1 86.1 REMARK 620 3 GTP A 900 O3G 175.5 90.8 REMARK 620 4 GTP A 900 O2B 91.0 175.7 92.4 REMARK 620 5 HOH A1032 O 89.4 91.4 93.9 85.5 REMARK 620 6 HOH A1037 O 89.4 93.6 87.6 89.5 174.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 22 OG1 REMARK 620 2 THR B 40 OG1 89.2 REMARK 620 3 GTP B 201 O3G 176.8 91.7 REMARK 620 4 GTP B 201 O2B 87.7 174.6 91.2 REMARK 620 5 HOH B 321 O 90.3 94.6 92.6 89.8 REMARK 620 6 HOH B 347 O 86.7 91.6 90.2 83.9 173.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6SQ2 RELATED DB: PDB REMARK 900 COMPLEX OF THIS PROTEIN WITH RILPL2 DBREF 6WHE A 1 181 UNP P61006 RAB8A_HUMAN 1 181 DBREF 6WHE B 1 181 UNP P61006 RAB8A_HUMAN 1 181 SEQADV 6WHE GLY A -2 UNP P61006 EXPRESSION TAG SEQADV 6WHE SER A -1 UNP P61006 EXPRESSION TAG SEQADV 6WHE HIS A 0 UNP P61006 EXPRESSION TAG SEQADV 6WHE LEU A 67 UNP P61006 GLN 67 ENGINEERED MUTATION SEQADV 6WHE GLU A 72 UNP P61006 THR 72 ENGINEERED MUTATION SEQADV 6WHE GLY B -2 UNP P61006 EXPRESSION TAG SEQADV 6WHE SER B -1 UNP P61006 EXPRESSION TAG SEQADV 6WHE HIS B 0 UNP P61006 EXPRESSION TAG SEQADV 6WHE LEU B 67 UNP P61006 GLN 67 ENGINEERED MUTATION SEQADV 6WHE GLU B 72 UNP P61006 THR 72 ENGINEERED MUTATION SEQRES 1 A 184 GLY SER HIS MET ALA LYS THR TYR ASP TYR LEU PHE LYS SEQRES 2 A 184 LEU LEU LEU ILE GLY ASP SER GLY VAL GLY LYS THR CYS SEQRES 3 A 184 VAL LEU PHE ARG PHE SER GLU ASP ALA PHE ASN SER THR SEQRES 4 A 184 PHE ILE SER THR ILE GLY ILE ASP PHE LYS ILE ARG THR SEQRES 5 A 184 ILE GLU LEU ASP GLY LYS ARG ILE LYS LEU GLN ILE TRP SEQRES 6 A 184 ASP THR ALA GLY LEU GLU ARG PHE ARG GLU ILE THR THR SEQRES 7 A 184 ALA TYR TYR ARG GLY ALA MET GLY ILE MET LEU VAL TYR SEQRES 8 A 184 ASP ILE THR ASN GLU LYS SER PHE ASP ASN ILE ARG ASN SEQRES 9 A 184 TRP ILE ARG ASN ILE GLU GLU HIS ALA SER ALA ASP VAL SEQRES 10 A 184 GLU LYS MET ILE LEU GLY ASN LYS CYS ASP VAL ASN ASP SEQRES 11 A 184 LYS ARG GLN VAL SER LYS GLU ARG GLY GLU LYS LEU ALA SEQRES 12 A 184 LEU ASP TYR GLY ILE LYS PHE MET GLU THR SER ALA LYS SEQRES 13 A 184 ALA ASN ILE ASN VAL GLU ASN ALA PHE PHE THR LEU ALA SEQRES 14 A 184 ARG ASP ILE LYS ALA LYS MET ASP LYS LYS LEU GLU GLY SEQRES 15 A 184 ASN SER SEQRES 1 B 184 GLY SER HIS MET ALA LYS THR TYR ASP TYR LEU PHE LYS SEQRES 2 B 184 LEU LEU LEU ILE GLY ASP SER GLY VAL GLY LYS THR CYS SEQRES 3 B 184 VAL LEU PHE ARG PHE SER GLU ASP ALA PHE ASN SER THR SEQRES 4 B 184 PHE ILE SER THR ILE GLY ILE ASP PHE LYS ILE ARG THR SEQRES 5 B 184 ILE GLU LEU ASP GLY LYS ARG ILE LYS LEU GLN ILE TRP SEQRES 6 B 184 ASP THR ALA GLY LEU GLU ARG PHE ARG GLU ILE THR THR SEQRES 7 B 184 ALA TYR TYR ARG GLY ALA MET GLY ILE MET LEU VAL TYR SEQRES 8 B 184 ASP ILE THR ASN GLU LYS SER PHE ASP ASN ILE ARG ASN SEQRES 9 B 184 TRP ILE ARG ASN ILE GLU GLU HIS ALA SER ALA ASP VAL SEQRES 10 B 184 GLU LYS MET ILE LEU GLY ASN LYS CYS ASP VAL ASN ASP SEQRES 11 B 184 LYS ARG GLN VAL SER LYS GLU ARG GLY GLU LYS LEU ALA SEQRES 12 B 184 LEU ASP TYR GLY ILE LYS PHE MET GLU THR SER ALA LYS SEQRES 13 B 184 ALA ASN ILE ASN VAL GLU ASN ALA PHE PHE THR LEU ALA SEQRES 14 B 184 ARG ASP ILE LYS ALA LYS MET ASP LYS LYS LEU GLU GLY SEQRES 15 B 184 ASN SER HET GTP A 900 32 HET MG A 901 1 HET GTP B 201 32 HET MG B 202 1 HET GOL B 203 6 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GTP 2(C10 H16 N5 O14 P3) FORMUL 4 MG 2(MG 2+) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *316(H2 O) HELIX 1 AA1 GLY A 20 ASP A 31 1 12 HELIX 2 AA2 LEU A 67 ARG A 69 5 3 HELIX 3 AA3 PHE A 70 TYR A 77 1 8 HELIX 4 AA4 ASN A 92 ASN A 98 1 7 HELIX 5 AA5 ASN A 98 ALA A 110 1 13 HELIX 6 AA6 VAL A 125 ARG A 129 5 5 HELIX 7 AA7 SER A 132 GLY A 144 1 13 HELIX 8 AA8 ASN A 157 LYS A 175 1 19 HELIX 9 AA9 GLY B 20 ASP B 31 1 12 HELIX 10 AB1 LEU B 67 ARG B 69 5 3 HELIX 11 AB2 PHE B 70 TYR B 78 1 9 HELIX 12 AB3 ASN B 92 ASN B 98 1 7 HELIX 13 AB4 ASN B 98 ALA B 110 1 13 HELIX 14 AB5 VAL B 125 ARG B 129 5 5 HELIX 15 AB6 SER B 132 GLY B 144 1 13 HELIX 16 AB7 ASN B 157 ASP B 174 1 18 SHEET 1 AA1 6 ILE A 43 LEU A 52 0 SHEET 2 AA1 6 LYS A 55 THR A 64 -1 O ILE A 57 N ILE A 50 SHEET 3 AA1 6 TYR A 7 ILE A 14 1 N LEU A 11 O TRP A 62 SHEET 4 AA1 6 GLY A 83 ASP A 89 1 O MET A 85 N LEU A 12 SHEET 5 AA1 6 GLU A 115 ASN A 121 1 O MET A 117 N LEU A 86 SHEET 6 AA1 6 LYS A 146 GLU A 149 1 O MET A 148 N GLY A 120 SHEET 1 AA2 6 ILE B 43 LEU B 52 0 SHEET 2 AA2 6 LYS B 55 THR B 64 -1 O ILE B 57 N ILE B 50 SHEET 3 AA2 6 TYR B 7 ILE B 14 1 N LEU B 11 O TRP B 62 SHEET 4 AA2 6 GLY B 83 ASP B 89 1 O MET B 85 N ILE B 14 SHEET 5 AA2 6 GLU B 115 ASN B 121 1 O MET B 117 N LEU B 86 SHEET 6 AA2 6 LYS B 146 GLU B 149 1 O LYS B 146 N ILE B 118 LINK OG1 THR A 22 MG MG A 901 1555 1555 1.98 LINK OG1 THR A 40 MG MG A 901 1555 1555 2.10 LINK O3G GTP A 900 MG MG A 901 1555 1555 2.02 LINK O2B GTP A 900 MG MG A 901 1555 1555 2.06 LINK MG MG A 901 O HOH A1032 1555 1555 2.02 LINK MG MG A 901 O HOH A1037 1555 1555 2.15 LINK OG1 THR B 22 MG MG B 202 1555 1555 2.00 LINK OG1 THR B 40 MG MG B 202 1555 1555 2.13 LINK O3G GTP B 201 MG MG B 202 1555 1555 2.03 LINK O2B GTP B 201 MG MG B 202 1555 1555 2.11 LINK MG MG B 202 O HOH B 321 1555 1555 2.10 LINK MG MG B 202 O HOH B 347 1555 1555 2.12 SITE 1 AC1 27 SER A 17 GLY A 18 VAL A 19 GLY A 20 SITE 2 AC1 27 LYS A 21 THR A 22 CYS A 23 PHE A 33 SITE 3 AC1 27 ASN A 34 SER A 35 PHE A 37 SER A 39 SITE 4 AC1 27 THR A 40 GLY A 66 ASN A 121 LYS A 122 SITE 5 AC1 27 ASP A 124 VAL A 125 SER A 151 ALA A 152 SITE 6 AC1 27 LYS A 153 MG A 901 HOH A1017 HOH A1032 SITE 7 AC1 27 HOH A1037 HOH A1069 HOH A1097 SITE 1 AC2 5 THR A 22 THR A 40 GTP A 900 HOH A1032 SITE 2 AC2 5 HOH A1037 SITE 1 AC3 28 SER B 17 GLY B 18 VAL B 19 GLY B 20 SITE 2 AC3 28 LYS B 21 THR B 22 CYS B 23 PHE B 33 SITE 3 AC3 28 ASN B 34 SER B 35 PHE B 37 SER B 39 SITE 4 AC3 28 THR B 40 GLY B 66 ASN B 121 LYS B 122 SITE 5 AC3 28 ASP B 124 VAL B 125 SER B 151 ALA B 152 SITE 6 AC3 28 LYS B 153 MG B 202 HOH B 301 HOH B 321 SITE 7 AC3 28 HOH B 331 HOH B 347 HOH B 379 HOH B 424 SITE 1 AC4 5 THR B 22 THR B 40 GTP B 201 HOH B 321 SITE 2 AC4 5 HOH B 347 SITE 1 AC5 10 ASP B 16 GLU B 51 GLY B 54 ARG B 71 SITE 2 AC5 10 ASN B 98 TRP B 102 ASN B 105 HOH B 338 SITE 3 AC5 10 HOH B 371 HOH B 417 CRYST1 36.092 118.377 39.603 90.00 101.96 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027707 0.000000 0.005868 0.00000 SCALE2 0.000000 0.008448 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025811 0.00000